Rroxscaffold_54G00443460

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000054
OG0000104
Physical Location & Seq
Forward (+)
23905 .. 24671
767 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_54G00443460.1

Sequence Viewer

Length: 597 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCCTGCCCACCCTGGAAACGGCTCGGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACGAGCCTCTGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTGCGAGGGGCTGGGCACGGGGGTCCCGATCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCGCGGCGAGAGCGGGTCGCCGCGTGCGGCCGGCCGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACGGTCGACTCGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

198

Amino Acids

21.19

Weight (kDa)

11.84

Isoelectric Point (pI)

45.62

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 202
AccBSI CCGCTC 2 cut(s) 56, 479
AccI GTMKAC 1 cut(s) 553
AccII CGCG 4 cut(s) 16, 223, 470, 489
AccIII TCCGGA 1 cut(s) 259
AclWI GGATC 3 cut(s) 366, 379, 420
AcoI YGGCCR 4 cut(s) 57, 180, 494, 498
AfaI GTAC 2 cut(s) 291, 567
AfiI CCNNNNNNNGG 4 cut(s) 121, 173, 189, 202
AgsI TTSAA 4 cut(s) 96, 110, 254, 547
AjiI CACGTC 1 cut(s) 219
AjnI CCWGG 1 cut(s) 166
AluBI AGCT 1 cut(s) 462
AluI AGCT 1 cut(s) 462
Alw21I GWGCWC 1 cut(s) 213
Alw26I GTCTC 1 cut(s) 314
AlwI GGATC 3 cut(s) 366, 379, 420
AlwNI CAGNNNCTG 1 cut(s) 202
Ama87I CYCGRG 3 cut(s) 382, 457, 537
Aor13HI TCCGGA 1 cut(s) 259
AoxI GGCC 7 cut(s) 57, 112, 155, 180, 246, 494, 498
ApeKI GCWGC 3 cut(s) 25, 398, 462
AspLEI GCGC 2 cut(s) 16, 239
AspS9I GGNCC 4 cut(s) 193, 247, 265, 420
AsuC2I CCSGG 5 cut(s) 48, 242, 502, 538, 539
AsuHPI GGTGA 2 cut(s) 329, 460
AvaI CYCGRG 3 cut(s) 382, 457, 537
AvaII GGWCC 3 cut(s) 193, 265, 420
BaeGI GKGCMC 1 cut(s) 415
BamHI GGATCC 1 cut(s) 371
Bbv12I GWGCWC 1 cut(s) 213
BbvI GCAGC 3 cut(s) 12, 385, 449
BceAI ACGGC 3 cut(s) 44, 157, 190
BciT130I CCWGG 1 cut(s) 168
BcnI CCSGG 5 cut(s) 48, 242, 502, 538, 539
BcoDI GTCTC 1 cut(s) 314
BglI GCCNNNNNGGC 1 cut(s) 245
BglII AGATCT 1 cut(s) 70
Bme1390I CCNGG 6 cut(s) 48, 168, 242, 502, 538, 539
Bme18I GGWCC 3 cut(s) 193, 265, 420
BmeT110I CYCGRG 3 cut(s) 382, 457, 537
BmgBI CACGTC 1 cut(s) 219
BmgT120I GGNCC 4 cut(s) 193, 247, 265, 420
BmiI GGNNCC 5 cut(s) 131, 194, 373, 421, 422
BmrFI CCNGG 6 cut(s) 48, 168, 242, 502, 538, 539
BmrI ACTGGG 1 cut(s) 521
BmsI GCATC 1 cut(s) 311
BmuI ACTGGG 1 cut(s) 521
BpuMI CCSGG 5 cut(s) 48, 242, 502, 538, 539
BsaI GGTCTC 1 cut(s) 314
BsaJI CCNNGG 6 cut(s) 166, 240, 313, 381, 501, 537
BsaWI WCCGGW 2 cut(s) 231, 259
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 177, 207
Bsc4I CCNNNNNNNGG 4 cut(s) 121, 173, 189, 202
Bse118I RCCGGY 2 cut(s) 283, 496
Bse1I ACTGG 2 cut(s) 516, 567
BseAI TCCGGA 1 cut(s) 259
BseBI CCWGG 1 cut(s) 168
BseDI CCNNGG 6 cut(s) 166, 240, 313, 381, 501, 537
BseLI CCNNNNNNNGG 4 cut(s) 121, 173, 189, 202
BseNI ACTGG 2 cut(s) 516, 567
BseSI GKGCMC 1 cut(s) 415
BseX3I CGGCCG 4 cut(s) 57, 180, 494, 498
BseXI GCAGC 3 cut(s) 12, 385, 449
BseYI CCCAGC 1 cut(s) 408
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 4 cut(s) 16, 223, 470, 489
Bsh1285I CGRYCG 7 cut(s) 23, 60, 183, 288, 497, 501, 553
BshFI GGCC 7 cut(s) 59, 114, 157, 182, 248, 496, 500
BsiEI CGRYCG 7 cut(s) 23, 60, 183, 288, 497, 501, 553
BsiHKAI GWGCWC 1 cut(s) 213
BsiHKCI CYCGRG 3 cut(s) 382, 457, 537
BsiSI CCGG 9 cut(s) 47, 183, 232, 242, 260, 284, 497, 501, 538
BslFI GGGAC 2 cut(s) 406, 518
BslI CCNNNNNNNGG 4 cut(s) 121, 173, 189, 202
BsmAI GTCTC 1 cut(s) 314
BsmFI GGGAC 2 cut(s) 406, 518
BsnI GGCC 7 cut(s) 59, 114, 157, 182, 248, 496, 500
Bso31I GGTCTC 1 cut(s) 314
BsoBI CYCGRG 3 cut(s) 382, 457, 537
Bsp1286I GDGCHC 2 cut(s) 213, 415
Bsp13I TCCGGA 1 cut(s) 259
Bsp143I GATC 3 cut(s) 70, 371, 425
BspANI GGCC 7 cut(s) 59, 114, 157, 182, 248, 496, 500
BspEI TCCGGA 1 cut(s) 259
BspFNI CGCG 4 cut(s) 16, 223, 470, 489
BspLI GGNNCC 5 cut(s) 131, 194, 373, 421, 422
BspPI GGATC 3 cut(s) 366, 379, 420
BspQI GCTCTTC 1 cut(s) 201
BspTNI GGTCTC 1 cut(s) 314
BsrBI CCGCTC 2 cut(s) 56, 479
BsrFI RCCGGY 2 cut(s) 283, 496
BsrI ACTGG 2 cut(s) 516, 567
BssAI RCCGGY 2 cut(s) 283, 496
BssECI CCNNGG 6 cut(s) 166, 240, 313, 381, 501, 537
BssMI GATC 3 cut(s) 70, 371, 425
BssT1I CCWWGG 1 cut(s) 313
Bst2UI CCWGG 1 cut(s) 168
Bst4CI ACNGT 2 cut(s) 551, 588
Bst6I CTCTTC 2 cut(s) 112, 201
BstC8I GCNNGC 3 cut(s) 159, 491, 498
BstFNI CGCG 4 cut(s) 16, 223, 470, 489
BstHHI GCGC 2 cut(s) 16, 239
BstKTI GATC 3 cut(s) 73, 374, 428
BstMAI GTCTC 1 cut(s) 314
BstMBI GATC 3 cut(s) 70, 371, 425
BstMCI CGRYCG 7 cut(s) 23, 60, 183, 288, 497, 501, 553
BstMWI GCNNNNNNNGC 8 cut(s) 22, 25, 65, 208, 245, 280, 462, 476
BstNI CCWGG 1 cut(s) 168
BstSCI CCNGG 6 cut(s) 46, 166, 240, 500, 536, 537
BstSLI GKGCMC 1 cut(s) 415
BstUI CGCG 4 cut(s) 16, 223, 470, 489
BstV1I GCAGC 3 cut(s) 12, 385, 449
BstX2I RGATCY 2 cut(s) 70, 371
BstYI RGATCY 2 cut(s) 70, 371
BstZI CGGCCG 4 cut(s) 57, 180, 494, 498
BsuRI GGCC 7 cut(s) 59, 114, 157, 182, 248, 496, 500
BtrI CACGTC 1 cut(s) 219
Cac8I GCNNGC 3 cut(s) 159, 491, 498
CaiI CAGNNNCTG 1 cut(s) 202
CfoI GCGC 2 cut(s) 16, 239
Cfr10I RCCGGY 2 cut(s) 283, 496
Cfr13I GGNCC 4 cut(s) 193, 247, 265, 420
Cfr9I CCCGGG 1 cut(s) 537
Csp6I GTAC 2 cut(s) 290, 566
CviAII CATG 2 cut(s) 134, 153
CviQI GTAC 2 cut(s) 290, 566
DpnI GATC 3 cut(s) 72, 373, 427
DpnII GATC 3 cut(s) 70, 371, 425
EaeI YGGCCR 4 cut(s) 57, 180, 494, 498
EagI CGGCCG 4 cut(s) 57, 180, 494, 498
Eam1104I CTCTTC 2 cut(s) 112, 201
EarI CTCTTC 2 cut(s) 112, 201
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 4 cut(s) 57, 180, 494, 498
Eco130I CCWWGG 1 cut(s) 313
Eco31I GGTCTC 1 cut(s) 314
Eco47I GGWCC 3 cut(s) 193, 265, 420
Eco52I CGGCCG 4 cut(s) 57, 180, 494, 498
Eco88I CYCGRG 3 cut(s) 382, 457, 537
EcoO109I RGGNCCY 1 cut(s) 420
EcoRII CCWGG 1 cut(s) 166
EcoT14I CCWWGG 1 cut(s) 313
ErhI CCWWGG 1 cut(s) 313
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 3 cut(s) 135, 154, 296
FaqI GGGAC 2 cut(s) 406, 518
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 1 cut(s) 472
FblI GTMKAC 1 cut(s) 553
FseI GGCCGGCC 1 cut(s) 500
GlaI GCGC 2 cut(s) 15, 238
GsaI CCCAGC 1 cut(s) 412
HaeIII GGCC 7 cut(s) 59, 114, 157, 182, 248, 496, 500
HapII CCGG 9 cut(s) 47, 183, 232, 242, 260, 284, 497, 501, 538
HhaI GCGC 2 cut(s) 16, 239
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 2 cut(s) 14, 237
HinP1I GCGC 2 cut(s) 14, 237
HincII GTYRAC 1 cut(s) 554
HindII GTYRAC 1 cut(s) 554
HinfI GANTC 2 cut(s) 555, 579
HpaII CCGG 9 cut(s) 47, 183, 232, 242, 260, 284, 497, 501, 538
HphI GGTGA 2 cut(s) 329, 460
Hpy166II GTNNAC 4 cut(s) 139, 320, 451, 554
Hpy188I TCNGA 1 cut(s) 584
Hpy188III TCNNGA 4 cut(s) 260, 384, 423, 429
Hpy8I GTNNAC 4 cut(s) 139, 320, 451, 554
Hpy99I CGWCG 3 cut(s) 65, 223, 441
HpyAV CCTTC 2 cut(s) 104, 533
HpyCH4III ACNGT 2 cut(s) 551, 588
HpyCH4IV ACGT 1 cut(s) 218
HpyCH4V TGCA 3 cut(s) 28, 68, 150
HpyF10VI GCNNNNNNNGC 8 cut(s) 22, 25, 65, 208, 245, 280, 462, 476
HpySE526I ACGT 1 cut(s) 218
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 2 cut(s) 14, 237
KflI GGGWCCC 1 cut(s) 420
Kpn2I TCCGGA 1 cut(s) 259
KroI GCCGGC 1 cut(s) 496
KroNI GCCGGC 1 cut(s) 498
Kzo9I GATC 3 cut(s) 70, 371, 425
LguI GCTCTTC 1 cut(s) 201
LmnI GCTCC 2 cut(s) 53, 525
Lsp1109I GCAGC 3 cut(s) 12, 385, 449
LweI GCATC 1 cut(s) 311
MaeII ACGT 1 cut(s) 218
MaeIII GTNAC 1 cut(s) 376
MalI GATC 3 cut(s) 72, 373, 427
MbiI CCGCTC 2 cut(s) 56, 479
MboI GATC 3 cut(s) 70, 371, 425
MboII GAAGA 2 cut(s) 129, 218
MflI RGATCY 2 cut(s) 70, 371
MhlI GDGCHC 2 cut(s) 213, 415
MluCI AATT 1 cut(s) 592
MlyI GAGTC 1 cut(s) 549
MnlI CCTC 7 cut(s) 3, 113, 179, 256, 337, 391, 396
MroI TCCGGA 1 cut(s) 259
MroNI GCCGGC 1 cut(s) 496
MseI TTAA 2 cut(s) 591, 595
MspA1I CMGCKG 1 cut(s) 199
MspI CCGG 9 cut(s) 47, 183, 232, 242, 260, 284, 497, 501, 538
MspR9I CCNGG 6 cut(s) 48, 168, 242, 502, 538, 539
MvaI CCWGG 1 cut(s) 168
MvnI CGCG 4 cut(s) 16, 223, 470, 489
MwoI GCNNNNNNNGC 8 cut(s) 22, 25, 65, 208, 245, 280, 462, 476
NaeI GCCGGC 1 cut(s) 498
NciI CCSGG 5 cut(s) 48, 242, 502, 538, 539
NdeII GATC 3 cut(s) 70, 371, 425
NgoMIV GCCGGC 1 cut(s) 496
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 5 cut(s) 131, 194, 373, 421, 422
NmeAIII GCCGAG 1 cut(s) 158
PacI TTAATTAA 1 cut(s) 595
PaeR7I CTCGAG 1 cut(s) 457
PciSI GCTCTTC 1 cut(s) 201
PcsI WCGNNNNNNNCGW 2 cut(s) 421, 555
PdiI GCCGGC 1 cut(s) 498
PfeI GAWTC 1 cut(s) 579
PflMI CCANNNNNTGG 1 cut(s) 202
PleI GAGTC 1 cut(s) 549
PpsI GAGTC 1 cut(s) 549
PpuMI RGGWCCY 1 cut(s) 420
Psp5II RGGWCCY 1 cut(s) 420
Psp6I CCWGG 1 cut(s) 166
PspFI CCCAGC 1 cut(s) 408
PspGI CCWGG 1 cut(s) 166
PspN4I GGNNCC 5 cut(s) 131, 194, 373, 421, 422
PspPI GGNCC 4 cut(s) 193, 247, 265, 420
PspPPI RGGWCCY 1 cut(s) 420
PspXI VCTCGAGB 1 cut(s) 457
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 2 cut(s) 70, 371
RigI GGCCGGCC 1 cut(s) 500
RsaI GTAC 2 cut(s) 291, 567
RsaNI GTAC 2 cut(s) 290, 566
SalI GTCGAC 1 cut(s) 552
SapI GCTCTTC 1 cut(s) 201
SaqAI TTAA 2 cut(s) 591, 595
Sau3AI GATC 3 cut(s) 70, 371, 425
Sau96I GGNCC 4 cut(s) 193, 247, 265, 420
SchI GAGTC 1 cut(s) 549
ScrFI CCNGG 6 cut(s) 48, 168, 242, 502, 538, 539
SduI GDGCHC 2 cut(s) 213, 415
SetI ASST 7 cut(s) 131, 190, 221, 310, 319, 383, 464
SfaNI GCATC 1 cut(s) 311
Sfr274I CTCGAG 1 cut(s) 457
SinI GGWCC 3 cut(s) 193, 265, 420
SlaI CTCGAG 1 cut(s) 457
SmaI CCCGGG 1 cut(s) 539
SmlI CTYRAG 1 cut(s) 457
SmoI CTYRAG 1 cut(s) 457
Sse9I AATT 1 cut(s) 592
SspI AATATT 1 cut(s) 92
StyD4I CCNGG 6 cut(s) 46, 166, 240, 500, 536, 537
StyI CCWWGG 1 cut(s) 313
TaaI ACNGT 2 cut(s) 551, 588
TaiI ACGT 1 cut(s) 221
TaqI TCGA 3 cut(s) 458, 553, 558
TaqII GACCGA 1 cut(s) 282
TasI AATT 1 cut(s) 592
TauI GCSGC 7 cut(s) 19, 59, 202, 248, 473, 489, 496
TfiI GAWTC 1 cut(s) 579
Tru1I TTAA 2 cut(s) 591, 595
Tru9I TTAA 2 cut(s) 591, 595
TseI GCWGC 3 cut(s) 25, 398, 462
TspGWI ACGGA 3 cut(s) 364, 522, 583
TspMI CCCGGG 1 cut(s) 537
Van91I CCANNNNNTGG 1 cut(s) 202
VpaK11BI GGWCC 3 cut(s) 193, 265, 420
XhoI CTCGAG 1 cut(s) 457
XmaI CCCGGG 1 cut(s) 537
XmiI GTMKAC 1 cut(s) 553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.