Rroxscaffold_1G00000130

Zinc finger MYM-type protein 1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000104
Physical Location & Seq
Reverse (-)
133967 .. 135436
1470 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00000130.1

Sequence Viewer

Length: 510 bp
ATGGGGGCCGGCGATGCGCCTCGGTCGGATGTGGAACGGTCACAAGCCGGTCCGCCACTCGACTCGGGGCGTGGACCGTTACGGATTGCGGCGGCGGCCAAAGCCGGGCTGTTGATATGCCCGTGGAGACGTCGTCGACGCGATCATGGTAGGCAGCATGCGCCGTCTCGGCGTGCTTCGGCATCTGCGTGCTCCTGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATGCTGACGTGCAAATCGACGGCGTGGCTGCTTTGTTGAGCCACGCCAAGGAATCGAGAGCTCCAAGTGGGCCATTTTTGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCAATGGAACAATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

169

Amino Acids

17.69

Weight (kDa)

9.56

Isoelectric Point (pI)

68.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 133
AccB7I CCANNNNNTGG 1 cut(s) 364
AccI GTMKAC 1 cut(s) 136
AccII CGCG 2 cut(s) 141, 385
AccIII TCCGGA 1 cut(s) 421
AcoI YGGCCR 1 cut(s) 96
AcyI GRCGYC 1 cut(s) 130
AfaI GTAC 1 cut(s) 453
AfiI CCNNNNNNNGG 5 cut(s) 105, 286, 335, 351, 364
AgsI TTSAA 1 cut(s) 416
AjiI CACGTC 2 cut(s) 247, 381
AjnI CCWGG 1 cut(s) 328
AluBI AGCT 1 cut(s) 299
AluI AGCT 1 cut(s) 299
Alw21I GWGCWC 3 cut(s) 194, 301, 375
Alw26I GTCTC 3 cut(s) 121, 171, 476
AlwNI CAGNNNCTG 2 cut(s) 364, 490
Ama87I CYCGRG 1 cut(s) 64
Aor13HI TCCGGA 1 cut(s) 421
AoxI GGCC 5 cut(s) 6, 96, 228, 308, 408
ApeKI GCWGC 3 cut(s) 154, 234, 266
AspLEI GCGC 3 cut(s) 19, 163, 401
AspS9I GGNCC 8 cut(s) 6, 50, 74, 229, 308, 355, 409, 427
AsuC2I CCSGG 2 cut(s) 106, 404
AsuHPI GGTGA 1 cut(s) 491
AvaI CYCGRG 1 cut(s) 64
AvaII GGWCC 4 cut(s) 50, 74, 355, 427
BanII GRGCYC 1 cut(s) 301
Bbv12I GWGCWC 3 cut(s) 194, 301, 375
BbvI GCAGC 3 cut(s) 166, 246, 253
BceAI ACGGC 3 cut(s) 148, 274, 352
BciT130I CCWGG 1 cut(s) 330
BcnI CCSGG 2 cut(s) 106, 404
BcoDI GTCTC 3 cut(s) 121, 171, 476
BglI GCCNNNNNGGC 2 cut(s) 169, 407
BisI GCNGC 8 cut(s) 90, 93, 96, 155, 235, 267, 362, 408
BlpI GCTNAGC 1 cut(s) 340
BlsI GCNGC 8 cut(s) 91, 94, 97, 156, 236, 268, 363, 409
Bme1390I CCNGG 3 cut(s) 106, 330, 404
Bme18I GGWCC 4 cut(s) 50, 74, 355, 427
BmeT110I CYCGRG 1 cut(s) 64
BmgBI CACGTC 2 cut(s) 247, 381
BmgT120I GGNCC 8 cut(s) 6, 50, 74, 229, 308, 355, 409, 427
BmiI GGNNCC 2 cut(s) 7, 356
BmrFI CCNGG 3 cut(s) 106, 330, 404
BmsI GCATC 4 cut(s) 4, 191, 229, 473
Bpu1102I GCTNAGC 1 cut(s) 340
BpuMI CCSGG 2 cut(s) 106, 404
BsaHI GRCGYC 1 cut(s) 130
BsaI GGTCTC 1 cut(s) 476
BsaJI CCNNGG 6 cut(s) 20, 122, 285, 328, 402, 475
BsaWI WCCGGW 2 cut(s) 393, 421
BsaXI ACNNNNNCTCC 4 cut(s) 118, 148, 339, 369
Bsc4I CCNNNNNNNGG 5 cut(s) 105, 286, 335, 351, 364
Bse118I RCCGGY 3 cut(s) 8, 47, 445
BseAI TCCGGA 1 cut(s) 421
BseBI CCWGG 1 cut(s) 330
BseDI CCNNGG 6 cut(s) 20, 122, 285, 328, 402, 475
BseGI GGATG 1 cut(s) 34
BseLI CCNNNNNNNGG 5 cut(s) 105, 286, 335, 351, 364
BseMII CTCAG 1 cut(s) 354
BseXI GCAGC 3 cut(s) 166, 246, 253
Bsh1236I CGCG 2 cut(s) 141, 385
Bsh1285I CGRYCG 2 cut(s) 26, 450
BshFI GGCC 5 cut(s) 8, 98, 230, 310, 410
BsiEI CGRYCG 2 cut(s) 26, 450
BsiHKAI GWGCWC 3 cut(s) 194, 301, 375
BsiHKCI CYCGRG 1 cut(s) 64
BsiSI CCGG 8 cut(s) 9, 48, 105, 345, 394, 404, 422, 446
BslI CCNNNNNNNGG 5 cut(s) 105, 286, 335, 351, 364
BsmAI GTCTC 3 cut(s) 121, 171, 476
BsmBI CGTCTC 2 cut(s) 121, 171
BsnI GGCC 5 cut(s) 8, 98, 230, 310, 410
Bso31I GGTCTC 1 cut(s) 476
BsoBI CYCGRG 1 cut(s) 64
Bsp1286I GDGCHC 3 cut(s) 194, 301, 375
Bsp13I TCCGGA 1 cut(s) 421
Bsp143I GATC 1 cut(s) 142
Bsp1720I GCTNAGC 1 cut(s) 340
BspANI GGCC 5 cut(s) 8, 98, 230, 310, 410
BspCNI CTCAG 1 cut(s) 353
BspEI TCCGGA 1 cut(s) 421
BspFNI CGCG 2 cut(s) 141, 385
BspLI GGNNCC 2 cut(s) 7, 356
BspQI GCTCTTC 1 cut(s) 363
BspTNI GGTCTC 1 cut(s) 476
BsrFI RCCGGY 3 cut(s) 8, 47, 445
BssAI RCCGGY 3 cut(s) 8, 47, 445
BssECI CCNNGG 6 cut(s) 20, 122, 285, 328, 402, 475
BssMI GATC 1 cut(s) 142
BssNI GRCGYC 1 cut(s) 130
BssT1I CCWWGG 2 cut(s) 285, 475
Bst2UI CCWGG 1 cut(s) 330
Bst4CI ACNGT 2 cut(s) 39, 78
Bst6I CTCTTC 1 cut(s) 363
BstACI GRCGYC 1 cut(s) 130
BstC8I GCNNGC 6 cut(s) 10, 159, 174, 190, 232, 321
BstDEI CTNAG 1 cut(s) 340
BstDSI CCRYGG 1 cut(s) 122
BstF5I GGATG 1 cut(s) 34
BstFNI CGCG 2 cut(s) 141, 385
BstHHI GCGC 3 cut(s) 19, 163, 401
BstKTI GATC 1 cut(s) 145
BstMAI GTCTC 3 cut(s) 121, 171, 476
BstMBI GATC 1 cut(s) 142
BstMCI CGRYCG 2 cut(s) 26, 450
BstMWI GCNNNNNNNGC 9 cut(s) 14, 95, 101, 160, 169, 316, 370, 407, 442
BstNI CCWGG 1 cut(s) 330
BstNSI RCATGY 1 cut(s) 161
BstSCI CCNGG 3 cut(s) 104, 328, 402
BstUI CGCG 2 cut(s) 141, 385
BstV1I GCAGC 3 cut(s) 166, 246, 253
BsuRI GGCC 5 cut(s) 8, 98, 230, 310, 410
BtgI CCRYGG 1 cut(s) 122
BtgZI GCGATG 2 cut(s) 27, 252
BtrI CACGTC 2 cut(s) 247, 381
BtsCI GGATG 1 cut(s) 34
Cac8I GCNNGC 6 cut(s) 10, 159, 174, 190, 232, 321
CaiI CAGNNNCTG 2 cut(s) 364, 490
CfoI GCGC 3 cut(s) 19, 163, 401
Cfr10I RCCGGY 3 cut(s) 8, 47, 445
Cfr13I GGNCC 8 cut(s) 6, 50, 74, 229, 308, 355, 409, 427
CpoI CGGWCCG 1 cut(s) 50
CseI GACGC 1 cut(s) 147
Csp6I GTAC 1 cut(s) 452
CspI CGGWCCG 1 cut(s) 50
CviAII CATG 2 cut(s) 146, 158
CviQI GTAC 1 cut(s) 452
DdeI CTNAG 1 cut(s) 340
DpnI GATC 1 cut(s) 144
DpnII GATC 1 cut(s) 142
EaeI YGGCCR 1 cut(s) 96
Eam1104I CTCTTC 1 cut(s) 363
EarI CTCTTC 1 cut(s) 363
EciI GGCGGA 1 cut(s) 42
Ecl136II GAGCTC 1 cut(s) 299
Eco130I CCWWGG 2 cut(s) 285, 475
Eco24I GRGCYC 1 cut(s) 301
Eco31I GGTCTC 1 cut(s) 476
Eco47I GGWCC 4 cut(s) 50, 74, 355, 427
Eco53kI GAGCTC 1 cut(s) 299
Eco88I CYCGRG 1 cut(s) 64
EcoICRI GAGCTC 1 cut(s) 299
EcoRII CCWGG 1 cut(s) 328
EcoT14I CCWWGG 2 cut(s) 285, 475
EcoT38I GRGCYC 1 cut(s) 301
ErhI CCWWGG 2 cut(s) 285, 475
Esp3I CGTCTC 2 cut(s) 121, 171
FaeI CATG 2 cut(s) 149, 161
FaiI YATR 4 cut(s) 118, 147, 159, 458
FatI CATG 2 cut(s) 145, 157
FauI CCCGC 2 cut(s) 191, 239
FblI GTMKAC 1 cut(s) 136
Fnu4HI GCNGC 8 cut(s) 90, 93, 96, 155, 235, 267, 362, 408
FokI GGATG 1 cut(s) 41
FriOI GRGCYC 1 cut(s) 301
Fsp4HI GCNGC 8 cut(s) 90, 93, 96, 155, 235, 267, 362, 408
GlaI GCGC 3 cut(s) 18, 162, 400
GluI GCNGC 8 cut(s) 90, 93, 96, 155, 235, 267, 362, 408
HaeIII GGCC 5 cut(s) 8, 98, 230, 310, 410
HapII CCGG 8 cut(s) 9, 48, 105, 345, 394, 404, 422, 446
HgaI GACGC 1 cut(s) 147
HhaI GCGC 3 cut(s) 19, 163, 401
Hin1I GRCGYC 1 cut(s) 130
Hin1II CATG 2 cut(s) 149, 161
Hin6I GCGC 3 cut(s) 17, 161, 399
HinP1I GCGC 3 cut(s) 17, 161, 399
HincII GTYRAC 1 cut(s) 137
HindII GTYRAC 1 cut(s) 137
HinfI GANTC 2 cut(s) 62, 290
HpaII CCGG 8 cut(s) 9, 48, 105, 345, 394, 404, 422, 446
HphI GGTGA 1 cut(s) 491
Hpy166II GTNNAC 3 cut(s) 74, 137, 482
Hpy188I TCNGA 1 cut(s) 28
Hpy188III TCNNGA 2 cut(s) 294, 422
Hpy8I GTNNAC 3 cut(s) 74, 137, 482
Hpy99I CGWCG 5 cut(s) 135, 138, 141, 260, 385
HpyCH4III ACNGT 2 cut(s) 39, 78
HpyCH4IV ACGT 3 cut(s) 130, 246, 380
HpyCH4V TGCA 1 cut(s) 250
HpyF10VI GCNNNNNNNGC 9 cut(s) 14, 95, 101, 160, 169, 316, 370, 407, 442
HpyF3I CTNAG 1 cut(s) 340
HpySE526I ACGT 3 cut(s) 130, 246, 380
Hsp92I GRCGYC 1 cut(s) 130
Hsp92II CATG 2 cut(s) 149, 161
HspAI GCGC 3 cut(s) 17, 161, 399
Kpn2I TCCGGA 1 cut(s) 421
KroI GCCGGC 1 cut(s) 8
KroNI GCCGGC 1 cut(s) 10
Kzo9I GATC 1 cut(s) 142
LguI GCTCTTC 1 cut(s) 363
LmnI GCTCC 2 cut(s) 197, 304
Lsp1109I GCAGC 3 cut(s) 166, 246, 253
LweI GCATC 4 cut(s) 4, 191, 229, 473
MaeII ACGT 3 cut(s) 130, 246, 380
MaeIII GTNAC 2 cut(s) 39, 78
MalI GATC 1 cut(s) 144
MboI GATC 1 cut(s) 142
MboII GAAGA 1 cut(s) 380
MhlI GDGCHC 3 cut(s) 194, 301, 375
MlyI GAGTC 1 cut(s) 56
MmeI TCCRAC 1 cut(s) 6
MnlI CCTC 6 cut(s) 30, 205, 220, 341, 418, 498
MroI TCCGGA 1 cut(s) 421
MroNI GCCGGC 1 cut(s) 8
MslI CAYNNNNRTG 1 cut(s) 187
MspA1I CMGCKG 1 cut(s) 361
MspI CCGG 8 cut(s) 9, 48, 105, 345, 394, 404, 422, 446
MspR9I CCNGG 3 cut(s) 106, 330, 404
MvaI CCWGG 1 cut(s) 330
MvnI CGCG 2 cut(s) 141, 385
MwoI GCNNNNNNNGC 9 cut(s) 14, 95, 101, 160, 169, 316, 370, 407, 442
NaeI GCCGGC 1 cut(s) 10
NciI CCSGG 2 cut(s) 106, 404
NdeII GATC 1 cut(s) 142
NgoMIV GCCGGC 1 cut(s) 8
NlaIII CATG 2 cut(s) 149, 161
NlaIV GGNNCC 2 cut(s) 7, 356
NmeAIII GCCGAG 1 cut(s) 148
NmuCI GTSAC 1 cut(s) 39
NspI RCATGY 1 cut(s) 161
PaeI GCATGC 1 cut(s) 161
PciSI GCTCTTC 1 cut(s) 363
PcsI WCGNNNNNNNCGW 2 cut(s) 185, 252
PdiI GCCGGC 1 cut(s) 10
PfeI GAWTC 1 cut(s) 290
PflFI GACNNNGTC 1 cut(s) 132
PflMI CCANNNNNTGG 1 cut(s) 364
PkrI GCNGC 8 cut(s) 91, 94, 97, 156, 236, 268, 363, 409
PleI GAGTC 1 cut(s) 56
PpsI GAGTC 1 cut(s) 56
Psp124BI GAGCTC 1 cut(s) 301
Psp6I CCWGG 1 cut(s) 328
PspGI CCWGG 1 cut(s) 328
PspN4I GGNNCC 2 cut(s) 7, 356
PspPI GGNCC 8 cut(s) 6, 50, 74, 229, 308, 355, 409, 427
PstNI CAGNNNCTG 2 cut(s) 364, 490
PsyI GACNNNGTC 1 cut(s) 132
RsaI GTAC 1 cut(s) 453
RsaNI GTAC 1 cut(s) 452
RseI CAYNNNNRTG 1 cut(s) 187
Rsr2I CGGWCCG 1 cut(s) 50
RsrII CGGWCCG 1 cut(s) 50
SacI GAGCTC 1 cut(s) 301
SalI GTCGAC 1 cut(s) 135
SapI GCTCTTC 1 cut(s) 363
SatI GCNGC 8 cut(s) 90, 93, 96, 155, 235, 267, 362, 408
Sau3AI GATC 1 cut(s) 142
Sau96I GGNCC 8 cut(s) 6, 50, 74, 229, 308, 355, 409, 427
SchI GAGTC 1 cut(s) 56
ScrFI CCNGG 3 cut(s) 106, 330, 404
SduI GDGCHC 3 cut(s) 194, 301, 375
SetI ASST 7 cut(s) 133, 249, 301, 352, 383, 472, 481
SfaNI GCATC 4 cut(s) 4, 191, 229, 473
SgrDI CGTCGACG 1 cut(s) 135
SinI GGWCC 4 cut(s) 50, 74, 355, 427
SmiMI CAYNNNNRTG 1 cut(s) 187
SphI GCATGC 1 cut(s) 161
SstI GAGCTC 1 cut(s) 301
StyD4I CCNGG 3 cut(s) 104, 328, 402
StyI CCWWGG 2 cut(s) 285, 475
TaaI ACNGT 2 cut(s) 39, 78
TaiI ACGT 3 cut(s) 133, 249, 383
TaqI TCGA 4 cut(s) 60, 136, 255, 293
TaqII GACCGA 2 cut(s) 12, 444
TauI GCSGC 5 cut(s) 92, 95, 98, 364, 410
TfiI GAWTC 1 cut(s) 290
TseFI GTSAC 1 cut(s) 39
TseI GCWGC 3 cut(s) 154, 234, 266
Tsp45I GTSAC 1 cut(s) 39
TspGWI ACGGA 1 cut(s) 97
Tth111I GACNNNGTC 1 cut(s) 132
Van91I CCANNNNNTGG 1 cut(s) 364
VpaK11BI GGWCC 4 cut(s) 50, 74, 355, 427
XceI RCATGY 1 cut(s) 161
XmiI GTMKAC 1 cut(s) 136
ZraI GACGTC 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.