Rroxscaffold_29G00441780

protein Sb1514s002020 source

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000029
OG0000104
Physical Location & Seq
Forward (+)
90143 .. 90761
619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_29G00441780.1

Sequence Viewer

Length: 579 bp
ATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCCGGGGCGTGAGCCCGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCGCGTCTCGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCCGAACCGGGACGTGGTGGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCCGCCCACCCCGGAAACGGCTCGCCGGAGGTAGGGTCCAGCGGCCGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGTCGTACTCATAACCGCATCAGTCTCCAAGGTGAACAGCCTCTGGTCAATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCGAGGGCCGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

192

Amino Acids

20.92

Weight (kDa)

11.08

Isoelectric Point (pI)

53.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 249
AccBSI CCGCTC 1 cut(s) 56
AccII CGCG 5 cut(s) 16, 159, 166, 168, 355
AccIII TCCGGA 2 cut(s) 239, 391
AclI AACGTT 1 cut(s) 228
AclWI GGATC 2 cut(s) 496, 509
AcoI YGGCCR 2 cut(s) 57, 332
AcsI RAATTY 1 cut(s) 194
AcyI GRCGYC 1 cut(s) 246
AfaI GTAC 1 cut(s) 423
AfiI CCNNNNNNNGG 7 cut(s) 121, 205, 211, 306, 321, 334, 543
AgsI TTSAA 3 cut(s) 96, 110, 386
AjiI CACGTC 2 cut(s) 211, 351
Alw21I GWGCWC 1 cut(s) 345
Alw26I GTCTC 3 cut(s) 166, 237, 445
AlwI GGATC 2 cut(s) 496, 509
AlwNI CAGNNNCTG 1 cut(s) 459
Ama87I CYCGRG 4 cut(s) 34, 260, 512, 529
Aor13HI TCCGGA 2 cut(s) 239, 391
AoxI GGCC 6 cut(s) 57, 112, 256, 332, 378, 534
ApeKI GCWGC 1 cut(s) 25
ApoI RAATTY 1 cut(s) 194
AspLEI GCGC 4 cut(s) 16, 159, 168, 371
AspS9I GGNCC 6 cut(s) 256, 325, 379, 397, 534, 548
AsuC2I CCSGG 7 cut(s) 35, 36, 48, 206, 301, 374, 538
AsuHPI GGTGA 1 cut(s) 460
AsuII TTCGAA 1 cut(s) 175
AvaI CYCGRG 4 cut(s) 34, 260, 512, 529
AvaII GGWCC 3 cut(s) 325, 397, 548
BaeGI GKGCMC 1 cut(s) 543
BamHI GGATCC 1 cut(s) 501
BanII GRGCYC 1 cut(s) 48
Bbv12I GWGCWC 1 cut(s) 345
BbvI GCAGC 1 cut(s) 12
BceAI ACGGC 4 cut(s) 44, 157, 238, 323
BcnI CCSGG 7 cut(s) 35, 36, 48, 206, 301, 374, 538
BcoDI GTCTC 3 cut(s) 166, 237, 445
BglI GCCNNNNNGGC 1 cut(s) 377
BglII AGATCT 1 cut(s) 70
BisI GCNGC 5 cut(s) 17, 26, 57, 332, 378
BlsI GCNGC 5 cut(s) 18, 27, 58, 333, 379
Bme1390I CCNGG 7 cut(s) 35, 36, 48, 206, 301, 374, 538
Bme18I GGWCC 3 cut(s) 325, 397, 548
BmeT110I CYCGRG 4 cut(s) 34, 260, 512, 529
BmgBI CACGTC 2 cut(s) 211, 351
BmgT120I GGNCC 6 cut(s) 256, 325, 379, 397, 534, 548
BmiI GGNNCC 6 cut(s) 131, 257, 326, 503, 549, 550
BmrFI CCNGG 7 cut(s) 35, 36, 48, 206, 301, 374, 538
BmrI ACTGGG 1 cut(s) 546
BmsI GCATC 1 cut(s) 443
BmuI ACTGGG 1 cut(s) 546
Bpu14I TTCGAA 1 cut(s) 175
BpuMI CCSGG 7 cut(s) 35, 36, 48, 206, 301, 374, 538
BsaHI GRCGYC 1 cut(s) 246
BsaJI CCNNGG 7 cut(s) 34, 35, 259, 299, 372, 444, 511
BsaWI WCCGGW 3 cut(s) 239, 363, 391
BsaXI ACNNNNNCTCC 4 cut(s) 45, 75, 309, 339
Bsc4I CCNNNNNNNGG 7 cut(s) 121, 205, 211, 306, 321, 334, 543
Bse118I RCCGGY 1 cut(s) 415
Bse1I ACTGG 1 cut(s) 552
BseAI TCCGGA 2 cut(s) 239, 391
BseDI CCNNGG 7 cut(s) 34, 35, 259, 299, 372, 444, 511
BseLI CCNNNNNNNGG 7 cut(s) 121, 205, 211, 306, 321, 334, 543
BseNI ACTGG 1 cut(s) 552
BseSI GKGCMC 1 cut(s) 543
BseX3I CGGCCG 2 cut(s) 57, 332
BseXI GCAGC 1 cut(s) 12
BsgI GTGCAG 1 cut(s) 87
Bsh1236I CGCG 5 cut(s) 16, 159, 166, 168, 355
Bsh1285I CGRYCG 4 cut(s) 23, 60, 335, 420
BshFI GGCC 6 cut(s) 59, 114, 258, 334, 380, 536
BsiEI CGRYCG 4 cut(s) 23, 60, 335, 420
BsiHKAI GWGCWC 1 cut(s) 345
BsiHKCI CYCGRG 4 cut(s) 34, 260, 512, 529
BslFI GGGAC 3 cut(s) 221, 534, 540
BslI CCNNNNNNNGG 7 cut(s) 121, 205, 211, 306, 321, 334, 543
BsmAI GTCTC 3 cut(s) 166, 237, 445
BsmBI CGTCTC 2 cut(s) 166, 237
BsmFI GGGAC 3 cut(s) 221, 534, 540
BsnI GGCC 6 cut(s) 59, 114, 258, 334, 380, 536
BsoBI CYCGRG 4 cut(s) 34, 260, 512, 529
Bsp119I TTCGAA 1 cut(s) 175
Bsp1286I GDGCHC 3 cut(s) 48, 345, 543
Bsp13I TCCGGA 2 cut(s) 239, 391
Bsp143I GATC 2 cut(s) 70, 501
BspANI GGCC 6 cut(s) 59, 114, 258, 334, 380, 536
BspEI TCCGGA 2 cut(s) 239, 391
BspFNI CGCG 5 cut(s) 16, 159, 166, 168, 355
BspLI GGNNCC 6 cut(s) 131, 257, 326, 503, 549, 550
BspPI GGATC 2 cut(s) 496, 509
BspQI GCTCTTC 1 cut(s) 333
BspT104I TTCGAA 1 cut(s) 175
BsrBI CCGCTC 1 cut(s) 56
BsrFI RCCGGY 1 cut(s) 415
BsrI ACTGG 1 cut(s) 552
BssAI RCCGGY 1 cut(s) 415
BssECI CCNNGG 7 cut(s) 34, 35, 259, 299, 372, 444, 511
BssMI GATC 2 cut(s) 70, 501
BssNI GRCGYC 1 cut(s) 246
BssT1I CCWWGG 1 cut(s) 444
Bst6I CTCTTC 3 cut(s) 112, 260, 333
BstACI GRCGYC 1 cut(s) 246
BstBI TTCGAA 1 cut(s) 175
BstC8I GCNNGC 2 cut(s) 292, 312
BstFNI CGCG 5 cut(s) 16, 159, 166, 168, 355
BstHHI GCGC 4 cut(s) 16, 159, 168, 371
BstKTI GATC 2 cut(s) 73, 504
BstMAI GTCTC 3 cut(s) 166, 237, 445
BstMBI GATC 2 cut(s) 70, 501
BstMCI CGRYCG 4 cut(s) 23, 60, 335, 420
BstMWI GCNNNNNNNGC 9 cut(s) 22, 25, 65, 156, 163, 165, 340, 377, 412
BstSCI CCNGG 7 cut(s) 33, 34, 46, 204, 299, 372, 536
BstSLI GKGCMC 1 cut(s) 543
BstUI CGCG 5 cut(s) 16, 159, 166, 168, 355
BstV1I GCAGC 1 cut(s) 12
BstX2I RGATCY 2 cut(s) 70, 501
BstYI RGATCY 2 cut(s) 70, 501
BstZI CGGCCG 2 cut(s) 57, 332
BsuRI GGCC 6 cut(s) 59, 114, 258, 334, 380, 536
BtrI CACGTC 2 cut(s) 211, 351
Cac8I GCNNGC 2 cut(s) 292, 312
CaiI CAGNNNCTG 1 cut(s) 459
CfoI GCGC 4 cut(s) 16, 159, 168, 371
Cfr10I RCCGGY 1 cut(s) 415
Cfr13I GGNCC 6 cut(s) 256, 325, 379, 397, 534, 548
Cfr9I CCCGGG 1 cut(s) 34
CseI GACGC 1 cut(s) 148
Csp6I GTAC 1 cut(s) 422
CviAII CATG 2 cut(s) 134, 153
CviQI GTAC 1 cut(s) 422
DpnI GATC 2 cut(s) 72, 503
DpnII GATC 2 cut(s) 70, 501
EaeI YGGCCR 2 cut(s) 57, 332
EagI CGGCCG 2 cut(s) 57, 332
Eam1104I CTCTTC 3 cut(s) 112, 260, 333
EarI CTCTTC 3 cut(s) 112, 260, 333
EciI GGCGGA 1 cut(s) 66
EclXI CGGCCG 2 cut(s) 57, 332
Eco130I CCWWGG 1 cut(s) 444
Eco24I GRGCYC 1 cut(s) 48
Eco47I GGWCC 3 cut(s) 325, 397, 548
Eco52I CGGCCG 2 cut(s) 57, 332
Eco88I CYCGRG 4 cut(s) 34, 260, 512, 529
EcoO109I RGGNCCY 2 cut(s) 256, 548
EcoT14I CCWWGG 1 cut(s) 444
EcoT38I GRGCYC 1 cut(s) 48
ErhI CCWWGG 1 cut(s) 444
Esp3I CGTCTC 2 cut(s) 166, 237
FaeI CATG 2 cut(s) 137, 156
FaiI YATR 3 cut(s) 135, 154, 428
FaqI GGGAC 3 cut(s) 221, 534, 540
FatI CATG 2 cut(s) 133, 152
FauI CCCGC 2 cut(s) 245, 299
Fnu4HI GCNGC 5 cut(s) 17, 26, 57, 332, 378
FriOI GRGCYC 1 cut(s) 48
Fsp4HI GCNGC 5 cut(s) 17, 26, 57, 332, 378
GlaI GCGC 4 cut(s) 15, 158, 167, 370
GluI GCNGC 5 cut(s) 17, 26, 57, 332, 378
HaeIII GGCC 6 cut(s) 59, 114, 258, 334, 380, 536
HgaI GACGC 1 cut(s) 148
HhaI GCGC 4 cut(s) 16, 159, 168, 371
Hin1I GRCGYC 1 cut(s) 246
Hin1II CATG 2 cut(s) 137, 156
Hin6I GCGC 4 cut(s) 14, 157, 166, 369
HinP1I GCGC 4 cut(s) 14, 157, 166, 369
HincII GTYRAC 1 cut(s) 220
HindII GTYRAC 1 cut(s) 220
HinfI GANTC 2 cut(s) 183, 236
HphI GGTGA 1 cut(s) 460
Hpy166II GTNNAC 3 cut(s) 139, 220, 451
Hpy188III TCNNGA 6 cut(s) 199, 240, 262, 392, 514, 557
Hpy8I GTNNAC 3 cut(s) 139, 220, 451
Hpy99I CGWCG 4 cut(s) 65, 251, 355, 569
HpyAV CCTTC 1 cut(s) 104
HpyCH4IV ACGT 4 cut(s) 210, 228, 246, 350
HpyCH4V TGCA 3 cut(s) 28, 68, 150
HpyF10VI GCNNNNNNNGC 9 cut(s) 22, 25, 65, 156, 163, 165, 340, 377, 412
HpySE526I ACGT 4 cut(s) 210, 228, 246, 350
Hsp92I GRCGYC 1 cut(s) 246
Hsp92II CATG 2 cut(s) 137, 156
HspAI GCGC 4 cut(s) 14, 157, 166, 369
KflI GGGWCCC 1 cut(s) 548
Kpn2I TCCGGA 2 cut(s) 239, 391
Kzo9I GATC 2 cut(s) 70, 501
LguI GCTCTTC 1 cut(s) 333
LmnI GCTCC 1 cut(s) 53
Lsp1109I GCAGC 1 cut(s) 12
LweI GCATC 1 cut(s) 443
MaeII ACGT 4 cut(s) 210, 228, 246, 350
MaeIII GTNAC 1 cut(s) 506
MalI GATC 2 cut(s) 72, 503
MbiI CCGCTC 1 cut(s) 56
MboI GATC 2 cut(s) 70, 501
MboII GAAGA 3 cut(s) 129, 277, 350
MflI RGATCY 2 cut(s) 70, 501
MhlI GDGCHC 3 cut(s) 48, 345, 543
MluCI AATT 1 cut(s) 194
MlyI GAGTC 1 cut(s) 245
MnlI CCTC 8 cut(s) 3, 113, 269, 311, 388, 467, 521, 525
MroI TCCGGA 2 cut(s) 239, 391
MseI TTAA 2 cut(s) 191, 284
MspA1I CMGCKG 1 cut(s) 331
MspR9I CCNGG 7 cut(s) 35, 36, 48, 206, 301, 374, 538
MvnI CGCG 5 cut(s) 16, 159, 166, 168, 355
MwoI GCNNNNNNNGC 9 cut(s) 22, 25, 65, 156, 163, 165, 340, 377, 412
NciI CCSGG 7 cut(s) 35, 36, 48, 206, 301, 374, 538
NdeII GATC 2 cut(s) 70, 501
NlaIII CATG 2 cut(s) 137, 156
NlaIV GGNNCC 6 cut(s) 131, 257, 326, 503, 549, 550
NspV TTCGAA 1 cut(s) 175
PaeR7I CTCGAG 1 cut(s) 529
PciSI GCTCTTC 1 cut(s) 333
PfeI GAWTC 1 cut(s) 183
PkrI GCNGC 5 cut(s) 18, 27, 58, 333, 379
PleI GAGTC 1 cut(s) 244
PpsI GAGTC 1 cut(s) 244
PpuMI RGGWCCY 1 cut(s) 548
Psp1406I AACGTT 1 cut(s) 228
Psp5II RGGWCCY 1 cut(s) 548
PspN4I GGNNCC 6 cut(s) 131, 257, 326, 503, 549, 550
PspPI GGNCC 6 cut(s) 256, 325, 379, 397, 534, 548
PspPPI RGGWCCY 1 cut(s) 548
PspXI VCTCGAGB 1 cut(s) 529
PstNI CAGNNNCTG 1 cut(s) 459
PsuI RGATCY 2 cut(s) 70, 501
RsaI GTAC 1 cut(s) 423
RsaNI GTAC 1 cut(s) 422
SapI GCTCTTC 1 cut(s) 333
SaqAI TTAA 2 cut(s) 191, 284
SatI GCNGC 5 cut(s) 17, 26, 57, 332, 378
Sau3AI GATC 2 cut(s) 70, 501
Sau96I GGNCC 6 cut(s) 256, 325, 379, 397, 534, 548
SchI GAGTC 1 cut(s) 245
ScrFI CCNGG 7 cut(s) 35, 36, 48, 206, 301, 374, 538
SduI GDGCHC 3 cut(s) 48, 345, 543
SetI ASST 8 cut(s) 131, 213, 231, 249, 322, 353, 450, 513
SfaNI GCATC 1 cut(s) 443
Sfr274I CTCGAG 1 cut(s) 529
SfuI TTCGAA 1 cut(s) 175
SinI GGWCC 3 cut(s) 325, 397, 548
SlaI CTCGAG 1 cut(s) 529
SmaI CCCGGG 1 cut(s) 36
SmlI CTYRAG 1 cut(s) 529
SmoI CTYRAG 1 cut(s) 529
Sse9I AATT 1 cut(s) 194
SspI AATATT 1 cut(s) 92
StyD4I CCNGG 7 cut(s) 33, 34, 46, 204, 299, 372, 536
StyI CCWWGG 1 cut(s) 444
TaiI ACGT 4 cut(s) 213, 231, 249, 353
TaqI TCGA 2 cut(s) 175, 530
TaqII GACCGA 1 cut(s) 414
TasI AATT 1 cut(s) 194
TauI GCSGC 4 cut(s) 19, 59, 334, 380
TfiI GAWTC 1 cut(s) 183
Tru1I TTAA 2 cut(s) 191, 284
Tru9I TTAA 2 cut(s) 191, 284
TseI GCWGC 1 cut(s) 25
TspGWI ACGGA 1 cut(s) 494
TspMI CCCGGG 1 cut(s) 34
VpaK11BI GGWCC 3 cut(s) 325, 397, 548
XapI RAATTY 1 cut(s) 194
XhoI CTCGAG 1 cut(s) 529
XmaI CCCGGG 1 cut(s) 34
ZraI GACGTC 1 cut(s) 247
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.