Rroxscaffold_71G00445750

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000071
OG0000104
Physical Location & Seq
Reverse (-)
75823 .. 76643
821 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_71G00445750.1

Sequence Viewer

Length: 678 bp
ATGGCGCTTAAGCGCGTGACCTATACCCGGCCGTCGGGGCAAGTGCCGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACACAGGGCGTGAGCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGCACATGGCGCGTCTCGCGCGAACTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGTGGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTGTTTAACAGCCTGCCCACCCTGGGACGTGGTGGCTCGGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCGGCGGCCCTTGAAAATCCGGAGGACCGAGTGCCATTCACGCCGGATTGGCTGCGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTGAACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGCCGCGTGCGGCCGGGGGACGGACTGGGAACGCTCCTTCGGGGGCTTTCCCGGGCGTTCAACGGTCGACTCGGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

225

Amino Acids

24.43

Weight (kDa)

10.98

Isoelectric Point (pI)

48.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000104)

Species Orthologous Gene IDs
pyrus_communis pycom2246g00050 pycom2246g00060 pycom2246g00070 pycom2246g00100 pycom2246g00170 pycom2575g00020 pycom520g01350
rosa_roxburghii Rroxscaffold_102G00450880 Rroxscaffold_102G00450940 Rroxscaffold_103G00450570 Rroxscaffold_104G00444660 Rroxscaffold_104G00444710 Rroxscaffold_104G00444740 Rroxscaffold_104G00444800 Rroxscaffold_104G00444860 Rroxscaffold_105G00447090 Rroxscaffold_105G00447190 Rroxscaffold_105G00447230 Rroxscaffold_106G00451430 Rroxscaffold_107G00442440 Rroxscaffold_107G00442550 Rroxscaffold_107G00442640 Rroxscaffold_107G00442690 Rroxscaffold_111G00451560 Rroxscaffold_112G00451580 Rroxscaffold_113G00451620 Rroxscaffold_115G00451690 Rroxscaffold_118G00451780 Rroxscaffold_122G00451870 Rroxscaffold_123G00451910 Rroxscaffold_124G00451960 Rroxscaffold_128G00452050 Rroxscaffold_12G00450640 Rroxscaffold_131G00452100 Rroxscaffold_132G00452130 Rroxscaffold_138G00452190 Rroxscaffold_13G00448670 Rroxscaffold_14G00441890 Rroxscaffold_14G00441960 Rroxscaffold_14G00442010 Rroxscaffold_14G00442070 Rroxscaffold_15G00447460 Rroxscaffold_15G00447510 Rroxscaffold_15G00447580 Rroxscaffold_162G00450750 Rroxscaffold_17G00435460 Rroxscaffold_17G00435510 Rroxscaffold_17G00435570 Rroxscaffold_17G00435640 Rroxscaffold_17G00435910 Rroxscaffold_18G00446090 Rroxscaffold_18G00446110 Rroxscaffold_18G00446170 Rroxscaffold_19G00448930 Rroxscaffold_1G00000010 Rroxscaffold_1G00000090 Rroxscaffold_1G00000130 Rroxscaffold_20G00445030 Rroxscaffold_20G00445040 Rroxscaffold_20G00445070 Rroxscaffold_20G00445110 Rroxscaffold_21G00439440 Rroxscaffold_21G00439460 Rroxscaffold_21G00439470 Rroxscaffold_21G00439520 Rroxscaffold_21G00439570 Rroxscaffold_21G00439660 Rroxscaffold_22G00439850 Rroxscaffold_22G00439990 Rroxscaffold_22G00440030 Rroxscaffold_25G00450140 Rroxscaffold_25G00450170 Rroxscaffold_26G00447770 Rroxscaffold_27G00446650 Rroxscaffold_29G00441730 Rroxscaffold_29G00441740 Rroxscaffold_29G00441760 Rroxscaffold_29G00441780 Rroxscaffold_29G00441830 Rroxscaffold_29G00441870 Rroxscaffold_30G00449490 Rroxscaffold_30G00449510 Rroxscaffold_31G00438130 Rroxscaffold_31G00438170 Rroxscaffold_31G00438270 Rroxscaffold_32G00442790 Rroxscaffold_32G00442800 Rroxscaffold_32G00442840 Rroxscaffold_33G00439700 Rroxscaffold_33G00439710 Rroxscaffold_34G00443170 Rroxscaffold_34G00443210 Rroxscaffold_34G00443280 Rroxscaffold_34G00443310 Rroxscaffold_35G00441010 Rroxscaffold_35G00441120 Rroxscaffold_35G00441180 Rroxscaffold_35G00441260 Rroxscaffold_35G00441290 Rroxscaffold_36G00440070 Rroxscaffold_36G00440110 Rroxscaffold_36G00440140 Rroxscaffold_36G00440190 Rroxscaffold_37G00445180 Rroxscaffold_37G00445190 Rroxscaffold_37G00445230 Rroxscaffold_37G00445240 Rroxscaffold_37G00445270 Rroxscaffold_38G00444450 Rroxscaffold_38G00444530 Rroxscaffold_38G00444570 Rroxscaffold_38G00444600 Rroxscaffold_38G00444620 Rroxscaffold_39G00448260 Rroxscaffold_40G00447720 Rroxscaffold_43G00449810 Rroxscaffold_43G00449840 Rroxscaffold_43G00449900 Rroxscaffold_44G00440460 Rroxscaffold_44G00440470 Rroxscaffold_44G00440510 Rroxscaffold_44G00440600 Rroxscaffold_44G00440640 Rroxscaffold_45G00438810 Rroxscaffold_45G00438840 Rroxscaffold_45G00438870 Rroxscaffold_45G00438890 Rroxscaffold_45G00438980 Rroxscaffold_46G00448720 Rroxscaffold_46G00448740 Rroxscaffold_47G00443950 Rroxscaffold_47G00443980 Rroxscaffold_47G00444000 Rroxscaffold_47G00444090 Rroxscaffold_48G00448430 Rroxscaffold_48G00448470 Rroxscaffold_48G00448510 Rroxscaffold_49G00438600 Rroxscaffold_49G00438620 Rroxscaffold_49G00438680 Rroxscaffold_49G00438710 Rroxscaffold_49G00438740 Rroxscaffold_49G00438780 Rroxscaffold_50G00444160 Rroxscaffold_50G00444260 Rroxscaffold_50G00444290 Rroxscaffold_50G00444370 Rroxscaffold_50G00444400 Rroxscaffold_53G00449700 Rroxscaffold_53G00449730 Rroxscaffold_53G00449740 Rroxscaffold_54G00443410 Rroxscaffold_54G00443460 Rroxscaffold_54G00443490 Rroxscaffold_54G00443530 Rroxscaffold_54G00443580 Rroxscaffold_54G00443610 Rroxscaffold_54G00443670 Rroxscaffold_55G00450070 Rroxscaffold_55G00450130 Rroxscaffold_56G00450950 Rroxscaffold_58G00449000 Rroxscaffold_58G00449050 Rroxscaffold_59G00442150 Rroxscaffold_59G00442180 Rroxscaffold_59G00442250 Rroxscaffold_59G00442270 Rroxscaffold_59G00442280 Rroxscaffold_60G00448270 Rroxscaffold_60G00448290 Rroxscaffold_60G00448330 Rroxscaffold_60G00448400 Rroxscaffold_61G00449970 Rroxscaffold_62G00437930 Rroxscaffold_62G00438030 Rroxscaffold_64G00450690 Rroxscaffold_64G00450700 Rroxscaffold_65G00445280 Rroxscaffold_65G00445350 Rroxscaffold_65G00445390 Rroxscaffold_66G00437570 Rroxscaffold_66G00437600 Rroxscaffold_66G00437620 Rroxscaffold_66G00437690 Rroxscaffold_66G00437730 Rroxscaffold_66G00437770 Rroxscaffold_66G00437860 Rroxscaffold_68G00447000 Rroxscaffold_68G00447040 Rroxscaffold_69G00446680 Rroxscaffold_69G00446780 Rroxscaffold_69G00446790 Rroxscaffold_69G00446810 Rroxscaffold_6G00387760 Rroxscaffold_6G00387790 Rroxscaffold_6G00387830 Rroxscaffold_6G00387840 Rroxscaffold_70G00446290 Rroxscaffold_70G00446390 Rroxscaffold_71G00445730 Rroxscaffold_71G00445750 Rroxscaffold_72G00449340 Rroxscaffold_72G00449380 Rroxscaffold_73G00439090 Rroxscaffold_73G00439120 Rroxscaffold_73G00439190 Rroxscaffold_73G00439210 Rroxscaffold_73G00439250 Rroxscaffold_74G00442890 Rroxscaffold_74G00442960 Rroxscaffold_75G00447280 Rroxscaffold_75G00447300 Rroxscaffold_75G00447340 Rroxscaffold_75G00447390 Rroxscaffold_75G00447410 Rroxscaffold_75G00447440 Rroxscaffold_76G00448590 Rroxscaffold_78G00449630 Rroxscaffold_78G00449640 Rroxscaffold_79G00450250 Rroxscaffold_80G00450280 Rroxscaffold_80G00450300 Rroxscaffold_80G00450310 Rroxscaffold_81G00450490 Rroxscaffold_82G00450810 Rroxscaffold_86G00451260 Rroxscaffold_87G00451290 Rroxscaffold_87G00451300 Rroxscaffold_87G00451320 Rroxscaffold_88G00451390 Rroxscaffold_90G00448810 Rroxscaffold_91G00442980 Rroxscaffold_91G00443040 Rroxscaffold_92G00446460 Rroxscaffold_92G00446490 Rroxscaffold_92G00446500 Rroxscaffold_92G00446520 Rroxscaffold_92G00446540 Rroxscaffold_92G00446560 Rroxscaffold_93G00440970 Rroxscaffold_93G00440990 Rroxscaffold_94G00445800 Rroxscaffold_94G00445870 Rroxscaffold_94G00445950 Rroxscaffold_94G00445990 Rroxscaffold_95G00449230 Rroxscaffold_95G00449260 Rroxscaffold_95G00449270 Rroxscaffold_96G00449080 Rroxscaffold_97G00442330 Rroxscaffold_97G00442350 Rroxscaffold_97G00442360 Rroxscaffold_98G00451340 Rroxscaffold_99G00451190 Rroxscaffold_99G00451210

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 303
AccB7I CCANNNNNTGG 1 cut(s) 391
AccBSI CCGCTC 2 cut(s) 110, 562
AccI GTMKAC 1 cut(s) 633
AccII CGCG 8 cut(s) 15, 70, 213, 220, 222, 412, 553, 572
AccIII TCCGGA 2 cut(s) 293, 448
AclI AACGTT 1 cut(s) 282
AcoI YGGCCR 4 cut(s) 29, 111, 369, 577
AcsI RAATTY 1 cut(s) 248
AcyI GRCGYC 1 cut(s) 300
AfaI GTAC 1 cut(s) 648
AfiI CCNNNNNNNGG 9 cut(s) 27, 34, 175, 259, 265, 353, 378, 391, 586
AflII CTTAAG 1 cut(s) 8
AgsI TTSAA 4 cut(s) 150, 164, 443, 627
AjiI CACGTC 3 cut(s) 265, 359, 408
AjnI CCWGG 1 cut(s) 351
AluBI AGCT 1 cut(s) 544
AluI AGCT 1 cut(s) 544
Alw21I GWGCWC 1 cut(s) 402
Alw26I GTCTC 2 cut(s) 220, 291
AlwNI CAGNNNCTG 1 cut(s) 391
Ama87I CYCGRG 3 cut(s) 314, 539, 617
Aor13HI TCCGGA 2 cut(s) 293, 448
AoxI GGCC 8 cut(s) 29, 48, 111, 166, 310, 369, 435, 577
ApeKI GCWGC 3 cut(s) 79, 481, 544
ApoI RAATTY 1 cut(s) 248
AspLEI GCGC 6 cut(s) 7, 15, 70, 213, 222, 428
AspS9I GGNCC 6 cut(s) 49, 310, 382, 436, 454, 502
AsuC2I CCSGG 7 cut(s) 28, 102, 260, 431, 581, 618, 619
AsuHPI GGTGA 1 cut(s) 542
AsuII TTCGAA 1 cut(s) 229
AvaI CYCGRG 3 cut(s) 314, 539, 617
AvaII GGWCC 3 cut(s) 382, 454, 502
BaeGI GKGCMC 1 cut(s) 497
Bbv12I GWGCWC 1 cut(s) 402
BbvI GCAGC 3 cut(s) 66, 468, 531
BceAI ACGGC 4 cut(s) 16, 98, 211, 292
BciT130I CCWGG 1 cut(s) 353
BcnI CCSGG 7 cut(s) 28, 102, 260, 431, 581, 618, 619
BcoDI GTCTC 2 cut(s) 220, 291
BfoI RGCGCY 1 cut(s) 8
BfrI CTTAAG 1 cut(s) 8
BglI GCCNNNNNGGC 3 cut(s) 37, 434, 478
BglII AGATCT 1 cut(s) 124
Bme1390I CCNGG 8 cut(s) 28, 102, 260, 353, 431, 581, 618, 619
Bme18I GGWCC 3 cut(s) 382, 454, 502
BmeT110I CYCGRG 3 cut(s) 314, 539, 617
BmgBI CACGTC 3 cut(s) 265, 359, 408
BmgT120I GGNCC 6 cut(s) 49, 310, 382, 436, 454, 502
BmiI GGNNCC 6 cut(s) 51, 185, 311, 383, 503, 504
BmrFI CCNGG 8 cut(s) 28, 102, 260, 353, 431, 581, 618, 619
BmrI ACTGGG 2 cut(s) 500, 601
BmuI ACTGGG 2 cut(s) 500, 601
Bpu14I TTCGAA 1 cut(s) 229
BpuMI CCSGG 7 cut(s) 28, 102, 260, 431, 581, 618, 619
BsaHI GRCGYC 1 cut(s) 300
BsaJI CCNNGG 7 cut(s) 313, 351, 352, 429, 551, 580, 617
BsaWI WCCGGW 3 cut(s) 293, 420, 448
BsaXI ACNNNNNCTCC 4 cut(s) 99, 129, 366, 396
Bsc4I CCNNNNNNNGG 9 cut(s) 27, 34, 175, 259, 265, 353, 378, 391, 586
Bse118I RCCGGY 1 cut(s) 46
Bse1I ACTGG 3 cut(s) 506, 596, 648
BseAI TCCGGA 2 cut(s) 293, 448
BseBI CCWGG 1 cut(s) 353
BseDI CCNNGG 7 cut(s) 313, 351, 352, 429, 551, 580, 617
BseLI CCNNNNNNNGG 9 cut(s) 27, 34, 175, 259, 265, 353, 378, 391, 586
BseNI ACTGG 3 cut(s) 506, 596, 648
BseSI GKGCMC 1 cut(s) 497
BseX3I CGGCCG 4 cut(s) 29, 111, 369, 577
BseXI GCAGC 3 cut(s) 66, 468, 531
BseYI CCCAGC 1 cut(s) 490
BsgI GTGCAG 1 cut(s) 141
Bsh1236I CGCG 8 cut(s) 15, 70, 213, 220, 222, 412, 553, 572
Bsh1285I CGRYCG 6 cut(s) 32, 77, 114, 372, 580, 633
BshFI GGCC 8 cut(s) 31, 50, 113, 168, 312, 371, 437, 579
BsiEI CGRYCG 6 cut(s) 32, 77, 114, 372, 580, 633
BsiHKAI GWGCWC 1 cut(s) 402
BsiHKCI CYCGRG 3 cut(s) 314, 539, 617
BslFI GGGAC 5 cut(s) 275, 369, 488, 494, 598
BslI CCNNNNNNNGG 9 cut(s) 27, 34, 175, 259, 265, 353, 378, 391, 586
BsmAI GTCTC 2 cut(s) 220, 291
BsmBI CGTCTC 2 cut(s) 220, 291
BsmFI GGGAC 5 cut(s) 275, 369, 488, 494, 598
BsnI GGCC 8 cut(s) 31, 50, 113, 168, 312, 371, 437, 579
BsoBI CYCGRG 3 cut(s) 314, 539, 617
Bsp119I TTCGAA 1 cut(s) 229
Bsp1286I GDGCHC 2 cut(s) 402, 497
Bsp13I TCCGGA 2 cut(s) 293, 448
Bsp143I GATC 1 cut(s) 124
BspANI GGCC 8 cut(s) 31, 50, 113, 168, 312, 371, 437, 579
BspEI TCCGGA 2 cut(s) 293, 448
BspFNI CGCG 8 cut(s) 15, 70, 213, 220, 222, 412, 553, 572
BspLI GGNNCC 6 cut(s) 51, 185, 311, 383, 503, 504
BspQI GCTCTTC 1 cut(s) 390
BspT104I TTCGAA 1 cut(s) 229
BspTI CTTAAG 1 cut(s) 8
BsrBI CCGCTC 2 cut(s) 110, 562
BsrFI RCCGGY 1 cut(s) 46
BsrI ACTGG 3 cut(s) 506, 596, 648
BssAI RCCGGY 1 cut(s) 46
BssECI CCNNGG 7 cut(s) 313, 351, 352, 429, 551, 580, 617
BssMI GATC 1 cut(s) 124
BssNI GRCGYC 1 cut(s) 300
Bst2UI CCWGG 1 cut(s) 353
Bst4CI ACNGT 2 cut(s) 631, 669
Bst6I CTCTTC 3 cut(s) 166, 314, 390
BstACI GRCGYC 1 cut(s) 300
BstAFI CTTAAG 1 cut(s) 8
BstBI TTCGAA 1 cut(s) 229
BstC8I GCNNGC 3 cut(s) 48, 344, 574
BstDSI CCRYGG 1 cut(s) 551
BstFNI CGCG 8 cut(s) 15, 70, 213, 220, 222, 412, 553, 572
BstH2I RGCGCY 1 cut(s) 8
BstHHI GCGC 6 cut(s) 7, 15, 70, 213, 222, 428
BstKTI GATC 1 cut(s) 127
BstMAI GTCTC 2 cut(s) 220, 291
BstMBI GATC 1 cut(s) 124
BstMCI CGRYCG 6 cut(s) 32, 77, 114, 372, 580, 633
BstNI CCWGG 1 cut(s) 353
BstSCI CCNGG 8 cut(s) 26, 100, 258, 351, 429, 579, 616, 617
BstSLI GKGCMC 1 cut(s) 497
BstUI CGCG 8 cut(s) 15, 70, 213, 220, 222, 412, 553, 572
BstV1I GCAGC 3 cut(s) 66, 468, 531
BstX2I RGATCY 1 cut(s) 124
BstYI RGATCY 1 cut(s) 124
BstZI CGGCCG 4 cut(s) 29, 111, 369, 577
BsuRI GGCC 8 cut(s) 31, 50, 113, 168, 312, 371, 437, 579
BtgI CCRYGG 1 cut(s) 551
BtrI CACGTC 3 cut(s) 265, 359, 408
Cac8I GCNNGC 3 cut(s) 48, 344, 574
CaiI CAGNNNCTG 1 cut(s) 391
CfoI GCGC 6 cut(s) 7, 15, 70, 213, 222, 428
Cfr10I RCCGGY 1 cut(s) 46
Cfr13I GGNCC 6 cut(s) 49, 310, 382, 436, 454, 502
Cfr42I CCGCGG 1 cut(s) 554
Cfr9I CCCGGG 1 cut(s) 617
CseI GACGC 1 cut(s) 202
Csp6I GTAC 1 cut(s) 647
CviAII CATG 2 cut(s) 188, 207
CviQI GTAC 1 cut(s) 647
DpnI GATC 1 cut(s) 126
DpnII GATC 1 cut(s) 124
EaeI YGGCCR 4 cut(s) 29, 111, 369, 577
EagI CGGCCG 4 cut(s) 29, 111, 369, 577
Eam1104I CTCTTC 3 cut(s) 166, 314, 390
EarI CTCTTC 3 cut(s) 166, 314, 390
EciI GGCGGA 1 cut(s) 120
EclXI CGGCCG 4 cut(s) 29, 111, 369, 577
Eco47I GGWCC 3 cut(s) 382, 454, 502
Eco52I CGGCCG 4 cut(s) 29, 111, 369, 577
Eco88I CYCGRG 3 cut(s) 314, 539, 617
EcoO109I RGGNCCY 2 cut(s) 310, 502
EcoRII CCWGG 1 cut(s) 351
Esp3I CGTCTC 2 cut(s) 220, 291
FaeI CATG 2 cut(s) 191, 210
FaiI YATR 3 cut(s) 24, 189, 208
FaqI GGGAC 5 cut(s) 275, 369, 488, 494, 598
FatI CATG 2 cut(s) 187, 206
FauI CCCGC 2 cut(s) 299, 555
FblI GTMKAC 1 cut(s) 633
GlaI GCGC 6 cut(s) 6, 14, 69, 212, 221, 427
GsaI CCCAGC 1 cut(s) 494
HaeII RGCGCY 1 cut(s) 8
HaeIII GGCC 8 cut(s) 31, 50, 113, 168, 312, 371, 437, 579
HgaI GACGC 1 cut(s) 202
HhaI GCGC 6 cut(s) 7, 15, 70, 213, 222, 428
Hin1I GRCGYC 1 cut(s) 300
Hin1II CATG 2 cut(s) 191, 210
Hin6I GCGC 6 cut(s) 5, 13, 68, 211, 220, 426
HinP1I GCGC 6 cut(s) 5, 13, 68, 211, 220, 426
HincII GTYRAC 2 cut(s) 274, 634
HindII GTYRAC 2 cut(s) 274, 634
HinfI GANTC 4 cut(s) 237, 290, 635, 660
HphI GGTGA 1 cut(s) 542
Hpy166II GTNNAC 4 cut(s) 193, 274, 533, 634
Hpy188I TCNGA 2 cut(s) 640, 665
Hpy188III TCNNGA 5 cut(s) 253, 294, 316, 449, 511
Hpy8I GTNNAC 4 cut(s) 193, 274, 533, 634
Hpy99I CGWCG 5 cut(s) 37, 119, 305, 412, 523
HpyAV CCTTC 2 cut(s) 158, 613
HpyCH4III ACNGT 2 cut(s) 631, 669
HpyCH4IV ACGT 5 cut(s) 264, 282, 300, 358, 407
HpyCH4V TGCA 3 cut(s) 82, 122, 204
HpySE526I ACGT 5 cut(s) 264, 282, 300, 358, 407
Hsp92I GRCGYC 1 cut(s) 300
Hsp92II CATG 2 cut(s) 191, 210
HspAI GCGC 6 cut(s) 5, 13, 68, 211, 220, 426
KflI GGGWCCC 1 cut(s) 502
Kpn2I TCCGGA 2 cut(s) 293, 448
KroI GCCGGC 1 cut(s) 46
KroNI GCCGGC 1 cut(s) 48
KspI CCGCGG 1 cut(s) 554
Kzo9I GATC 1 cut(s) 124
LguI GCTCTTC 1 cut(s) 390
LmnI GCTCC 2 cut(s) 107, 605
Lsp1109I GCAGC 3 cut(s) 66, 468, 531
MaeII ACGT 5 cut(s) 264, 282, 300, 358, 407
MaeIII GTNAC 1 cut(s) 16
MalI GATC 1 cut(s) 126
MbiI CCGCTC 2 cut(s) 110, 562
MboI GATC 1 cut(s) 124
MboII GAAGA 3 cut(s) 183, 331, 407
MflI RGATCY 1 cut(s) 124
MhlI GDGCHC 2 cut(s) 402, 497
MluCI AATT 2 cut(s) 248, 673
MlyI GAGTC 2 cut(s) 299, 629
MnlI CCTC 6 cut(s) 57, 167, 323, 368, 445, 479
MroI TCCGGA 2 cut(s) 293, 448
MroNI GCCGGC 1 cut(s) 46
MseI TTAA 5 cut(s) 9, 245, 336, 672, 676
MspA1I CMGCKG 2 cut(s) 388, 553
MspCI CTTAAG 1 cut(s) 8
MspR9I CCNGG 8 cut(s) 28, 102, 260, 353, 431, 581, 618, 619
MvaI CCWGG 1 cut(s) 353
MvnI CGCG 8 cut(s) 15, 70, 213, 220, 222, 412, 553, 572
NaeI GCCGGC 1 cut(s) 48
NciI CCSGG 7 cut(s) 28, 102, 260, 431, 581, 618, 619
NdeII GATC 1 cut(s) 124
NgoMIV GCCGGC 1 cut(s) 46
NlaIII CATG 2 cut(s) 191, 210
NlaIV GGNNCC 6 cut(s) 51, 185, 311, 383, 503, 504
NmeAIII GCCGAG 1 cut(s) 347
NmuCI GTSAC 1 cut(s) 16
NspV TTCGAA 1 cut(s) 229
PacI TTAATTAA 1 cut(s) 676
PaeR7I CTCGAG 1 cut(s) 539
PasI CCCWGGG 1 cut(s) 352
PciSI GCTCTTC 1 cut(s) 390
PdiI GCCGGC 1 cut(s) 48
PfeI GAWTC 2 cut(s) 237, 660
PflMI CCANNNNNTGG 1 cut(s) 391
PleI GAGTC 2 cut(s) 298, 629
PpsI GAGTC 2 cut(s) 298, 629
PpuMI RGGWCCY 1 cut(s) 502
Psp1406I AACGTT 1 cut(s) 282
Psp5II RGGWCCY 1 cut(s) 502
Psp6I CCWGG 1 cut(s) 351
PspFI CCCAGC 1 cut(s) 490
PspGI CCWGG 1 cut(s) 351
PspN4I GGNNCC 6 cut(s) 51, 185, 311, 383, 503, 504
PspPI GGNCC 6 cut(s) 49, 310, 382, 436, 454, 502
PspPPI RGGWCCY 1 cut(s) 502
PspXI VCTCGAGB 1 cut(s) 539
PstNI CAGNNNCTG 1 cut(s) 391
PsuI RGATCY 1 cut(s) 124
RsaI GTAC 1 cut(s) 648
RsaNI GTAC 1 cut(s) 647
SacII CCGCGG 1 cut(s) 554
SalI GTCGAC 1 cut(s) 632
SapI GCTCTTC 1 cut(s) 390
SaqAI TTAA 5 cut(s) 9, 245, 336, 672, 676
Sau3AI GATC 1 cut(s) 124
Sau96I GGNCC 6 cut(s) 49, 310, 382, 436, 454, 502
SchI GAGTC 2 cut(s) 299, 629
ScrFI CCNGG 8 cut(s) 28, 102, 260, 353, 431, 581, 618, 619
SduI GDGCHC 2 cut(s) 402, 497
SetI ASST 9 cut(s) 23, 185, 267, 285, 303, 361, 379, 410, 546
Sfr274I CTCGAG 1 cut(s) 539
Sfr303I CCGCGG 1 cut(s) 554
SfuI TTCGAA 1 cut(s) 229
SgrBI CCGCGG 1 cut(s) 554
SinI GGWCC 3 cut(s) 382, 454, 502
SlaI CTCGAG 1 cut(s) 539
SmaI CCCGGG 1 cut(s) 619
SmlI CTYRAG 2 cut(s) 8, 539
SmoI CTYRAG 2 cut(s) 8, 539
Sse9I AATT 2 cut(s) 248, 673
SspI AATATT 1 cut(s) 146
StyD4I CCNGG 8 cut(s) 26, 100, 258, 351, 429, 579, 616, 617
TaaI ACNGT 2 cut(s) 631, 669
TaiI ACGT 5 cut(s) 267, 285, 303, 361, 410
TaqI TCGA 3 cut(s) 229, 540, 633
TaqII GACCGA 1 cut(s) 471
TasI AATT 2 cut(s) 248, 673
TauI GCSGC 7 cut(s) 73, 113, 391, 437, 556, 572, 579
TfiI GAWTC 2 cut(s) 237, 660
Tru1I TTAA 5 cut(s) 9, 245, 336, 672, 676
Tru9I TTAA 5 cut(s) 9, 245, 336, 672, 676
TseFI GTSAC 1 cut(s) 16
TseI GCWGC 3 cut(s) 79, 481, 544
Tsp45I GTSAC 1 cut(s) 16
TspGWI ACGGA 2 cut(s) 602, 664
TspMI CCCGGG 1 cut(s) 617
Van91I CCANNNNNTGG 1 cut(s) 391
Vha464I CTTAAG 1 cut(s) 8
VpaK11BI GGWCC 3 cut(s) 382, 454, 502
XapI RAATTY 1 cut(s) 248
XhoI CTCGAG 1 cut(s) 539
XmaI CCCGGG 1 cut(s) 617
XmiI GTMKAC 1 cut(s) 633
ZraI GACGTC 1 cut(s) 301
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.