AT1G65180

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000226
Physical Location & Seq
Reverse (-)
24211678 .. 24213946
2269 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G65180.1

Sequence Viewer

Length: 1962 bp
ATGGAACCTGAGATGGTGCGACTACCCATTCATGAGCACTGGCTGACACCTGCAAGAGATAATCGGTGGGGTAAATGTTGTGGACTCCAATTCAAAACTATCAGTGATGGCTACAACTGCAGAAAATGTCGTTATTTCTTCCATAAGAGTTGCAGCAACTGCCCTAAAGAGATCAACCACCCTTCTCACAAGTGTGATAAGAATCTTTCTCTTATTACAAATTTTGCCAGCTGGAGTGTGAGATGCCGTACATGTAAAGAGACAATCCAGCCCTATATCCAGAACTATGAATGTCAGCGCTGTGAATTCAACATCCATTTGGATTGTTTCAAGTACCCACCACCGAAAGTCATTGATTTTCCCCAGAACCATGACCACAAACTCAAGCTAGAGATGGTGAGAAGCTCCTTCACCTGCTTTACTTGTGGGAAGGGAGGCAGTGGATATCCTTACAAATGCCATGAATGCGATTTGGCATTCCATGTGGATTGCGAAAAGTATGGAGCAGAGGTAAACCACCCTTCCCACTCCTTACACACACTAAAACTCATCACTGGTAAACCACCGGCTTATACTGATGGGAATTGTAGTTTATGTGGGAAAAAGATTTTTGACGAAATGTTTTATCACTGTTCCGCTTGTAACTTTACTTTGGATTTGCGATGTGTTTCTCTTCCACCACCACTAAATCTTCACGACCAAAACACCCACAACCATGAACTAACCCTTATGCCAAAATTGATCTCTTTTACTTGCACCACTTGCGGCCTCCATGGAGATCGAAGCCCATATGTCTGTCTTCAATGCAATTTCACTTCCCATAACAATTGCTCTGGATTTCCATGGGTCATCAATATCAACCGCCATGATCATCGCGTTTCTCGCACTTCTCTTCTTGGTATTATTGATTCAGTATGTGGTGTTTGTCGTAAGAAAATGGATTGGAGTTGTGGGGGATATTCTTGTAAGAGGTGTTCTGAGTCTACATTTCATACCAAATGCGCTACTAGAGAAGATGTTTGGGATGGAATAGAGATGAAAGATGAGCCTGAAGAAGATGAACCTATGGAACCATTCGAGGTGATTAGTGAAGGTATAATACGACATTTCAGCCATATAGAGCATAACTTAAGACTGGACAAGTCTGGTACCTTTGTTGAGGAGAGAAGTTGCAAGGCATGTGCTTATCCTATCTATCATGATCCCTTCTACAGTTGTATGAGTTGTGATTTTCTTCTACACGAGAACTGTGCTAAACATCCTACACGAAAACGTCATGTGCTAAGCAATAAACCGTATATTCTACATGCATCTCAACGTAACTACTCTAAGTGTAAGGCTTGTGGAGTATTTTTTAATTGTTTCATATACGGTACTTTTCCGTTTGGATTAGATGTGCGATGTGCCTCCTTTTCTGGGTCACTTGTCCATCCAAGTCACCAACATCCCTTGTTTTACACATCACCAAAAGGAGTATGTAGTGCTTGCAACAAGGAAACATCTCACGTGCTCAGATGCGTTGAAGATAAGTGTGGATACGCCTTGGATTTCAAATGCGCTCTATTACCACATGAGGTCAAGCATAGAGTCGACGATCATTTTCTCTCTTTATGCTATGGTGAAAGAGATGCAAGTGGTAAATATTGGTGTGATATTTGCGAGAAAGAAACTGATCCAACAAAATGGTTTTACACTTGTAAAGATTGTGGGGTAACTTTGCATACCAATTGTGTGCTCGGAGATTTCCGAGGCCTGGAACCGGAAACAAATATAGTATTGGATGATGACCGGATGCAGATGACACTTTACGAGACCGTTCGCAACAATAGTATGTCTCGACCAGTTTGTTATAAATGTAAGTACCATTGCATTTTCCCTATCATCTTGAAAGTCACCGACGAAGATAAATACTTTTGCTCTATCAGTTGCTGTGACATTAAAACCCTTCCCTTCTACAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2

Protein Analysis

653

Amino Acids

75.34

Weight (kDa)

7.42

Isoelectric Point (pI)

47.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 62 - 109 2.7e-07 C1 domain
C1_2 PF03107 123 - 164 1.9e-08 C1 domain
C1_2 PF03107 174 - 223 1.9e-12 C1 domain
C1_2 PF03107 236 - 277 5.6e-09 C1 domain
C1_2 PF03107 287 - 335 6.2e-08 C1 domain
C1_2 PF03107 370 - 418 3.8e-10 C1 domain
C1_2 PF03107 530 - 578 2.5e-12 C1 domain
C1-like_CT PF22926 603 - 644 3.3e-15 C1 domain-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1851
AarI CACCTGC 2 cut(s) 58, 422
Acc36I ACCTGC 2 cut(s) 58, 422
Acc65I GGTACC 1 cut(s) 1148
AccB1I GGYRCC 1 cut(s) 1148
AccI GTMKAC 2 cut(s) 983, 1590
AccII CGCG 1 cut(s) 876
AciI CCGC 3 cut(s) 636, 765, 862
AclWI GGATC 2 cut(s) 1196, 1667
AcsI RAATTY 2 cut(s) 220, 305
AcuI CTGAAG 1 cut(s) 1071
AcvI CACGTG 1 cut(s) 1507
AfaI GTAC 5 cut(s) 250, 335, 1150, 1375, 1862
AfeI AGCGCT 1 cut(s) 299
AfiI CCNNNNNNNGG 3 cut(s) 1416, 1753, 1759
AflII CTTAAG 1 cut(s) 1129
AflIII ACRYGT 1 cut(s) 251
AgsI TTSAA 7 cut(s) 94, 310, 331, 803, 1523, 1552, 1888
AjnI CCWGG 1 cut(s) 1752
AleI CACNNNNGTG 1 cut(s) 192
AluBI AGCT 3 cut(s) 231, 388, 405
AluI AGCT 3 cut(s) 231, 388, 405
Alw21I GWGCWC 3 cut(s) 39, 1512, 1737
Alw26I GTCTC 3 cut(s) 254, 1805, 1839
AlwI GGATC 2 cut(s) 1196, 1667
AlwNI CAGNNNCTG 2 cut(s) 159, 1929
Aor51HI AGCGCT 1 cut(s) 299
AoxI GGCC 2 cut(s) 766, 1750
ApeKI GCWGC 1 cut(s) 153
ApoI RAATTY 2 cut(s) 220, 305
Asp718I GGTACC 1 cut(s) 1148
AspLEI GCGC 3 cut(s) 300, 1004, 1559
AsuHPI GGTGA 7 cut(s) 403, 409, 1093, 1430, 1455, 1631, 1885
BaeI ACNNNNGTAYC 2 cut(s) 1140, 1173
BanI GGYRCC 1 cut(s) 1148
BarI GAAGNNNNNNTAC 2 cut(s) 1083, 1115
BauI CACGAG 1 cut(s) 1241
BbrPI CACGTG 1 cut(s) 1507
BbsI GAAGAC 1 cut(s) 791
Bbv12I GWGCWC 3 cut(s) 39, 1512, 1737
BbvI GCAGC 1 cut(s) 165
BccI CCATC 6 cut(s) 7, 101, 388, 572, 1019, 1437
BceAI ACGGC 1 cut(s) 231
BcgI CGANNNNNNTGC 2 cut(s) 1232, 1266
BciT130I CCWGG 1 cut(s) 1754
BciVI GTATCC 1 cut(s) 1529
BclI TGATCA 1 cut(s) 868
BcoDI GTCTC 3 cut(s) 254, 1805, 1839
BfaI CTAG 2 cut(s) 389, 1008
BfmI CTRYAG 2 cut(s) 118, 1210
BfoI RGCGCY 1 cut(s) 301
BfrI CTTAAG 1 cut(s) 1129
BfuAI ACCTGC 2 cut(s) 58, 422
BfuI GTATCC 1 cut(s) 1529
BisI GCNGC 2 cut(s) 154, 766
BlpI GCTNAGC 1 cut(s) 1283
BlsI GCNGC 2 cut(s) 155, 767
Bme1390I CCNGG 1 cut(s) 1754
BmiI GGNNCC 4 cut(s) 6, 1071, 1150, 1758
BmrFI CCNGG 1 cut(s) 1754
BmsI GCATC 5 cut(s) 233, 1319, 1505, 1618, 1782
BpiI GAAGAC 1 cut(s) 791
BpmI CTGGAG 1 cut(s) 253
Bpu1102I GCTNAGC 1 cut(s) 1283
BpuEI CTTGAG 1 cut(s) 368
BsaAI YACGTR 1 cut(s) 1507
BsaBI GATNNNNATC 1 cut(s) 201
BsaI GGTCTC 1 cut(s) 1805
BsaJI CCNNGG 4 cut(s) 772, 842, 1542, 1747
BsaWI WCCGGW 2 cut(s) 1759, 1788
BsaXI ACNNNNNCTCC 2 cut(s) 495, 525
Bsc4I CCNNNNNNNGG 3 cut(s) 1416, 1753, 1759
Bse118I RCCGGY 1 cut(s) 565
Bse1I ACTGG 4 cut(s) 44, 559, 1140, 1841
Bse3DI GCAATG 1 cut(s) 1864
Bse8I GATNNNNATC 1 cut(s) 201
BseBI CCWGG 1 cut(s) 1754
BseDI CCNNGG 4 cut(s) 772, 842, 1542, 1747
BseGI GGATG 7 cut(s) 312, 1030, 1258, 1429, 1444, 1786, 1797
BseJI GATNNNNATC 1 cut(s) 201
BseLI CCNNNNNNNGG 3 cut(s) 1416, 1753, 1759
BseMI GCAATG 1 cut(s) 1864
BseMII CTCAG 2 cut(s) 969, 1525
BseNI ACTGG 4 cut(s) 44, 559, 1140, 1841
BseRI GAGGAG 1 cut(s) 1175
BseXI GCAGC 1 cut(s) 165
Bsh1236I CGCG 1 cut(s) 876
BshFI GGCC 2 cut(s) 768, 1752
BshNI GGYRCC 1 cut(s) 1148
BsiHKAI GWGCWC 3 cut(s) 39, 1512, 1737
BsiSI CCGG 3 cut(s) 566, 1760, 1789
BslI CCNNNNNNNGG 3 cut(s) 1416, 1753, 1759
BsmAI GTCTC 3 cut(s) 254, 1805, 1839
BsmI GAATGC 2 cut(s) 470, 476
BsnI GGCC 2 cut(s) 768, 1752
Bso31I GGTCTC 1 cut(s) 1805
Bsp1286I GDGCHC 3 cut(s) 39, 1512, 1737
Bsp143I GATC 7 cut(s) 171, 741, 778, 868, 1201, 1594, 1672
Bsp1720I GCTNAGC 1 cut(s) 1283
Bsp19I CCATGG 2 cut(s) 772, 842
BspACI CCGC 3 cut(s) 636, 765, 862
BspANI GGCC 2 cut(s) 768, 1752
BspCNI CTCAG 2 cut(s) 970, 1524
BspFNI CGCG 1 cut(s) 876
BspHI TCATGA 2 cut(s) 31, 1198
BspLI GGNNCC 4 cut(s) 6, 1071, 1150, 1758
BspMAI CTGCAG 1 cut(s) 122
BspMI ACCTGC 2 cut(s) 58, 422
BspPI GGATC 2 cut(s) 1196, 1667
BspT107I GGYRCC 1 cut(s) 1148
BspTI CTTAAG 1 cut(s) 1129
BspTNI GGTCTC 1 cut(s) 1805
BsrDI GCAATG 1 cut(s) 1864
BsrFI RCCGGY 1 cut(s) 565
BsrI ACTGG 4 cut(s) 44, 559, 1140, 1841
BssAI RCCGGY 1 cut(s) 565
BssECI CCNNGG 4 cut(s) 772, 842, 1542, 1747
BssMI GATC 7 cut(s) 171, 741, 778, 868, 1201, 1594, 1672
BssSI CACGAG 1 cut(s) 1241
BssT1I CCWWGG 3 cut(s) 772, 842, 1542
Bst2BI CACGAG 1 cut(s) 1241
Bst2UI CCWGG 1 cut(s) 1754
Bst4CI ACNGT 6 cut(s) 632, 1214, 1250, 1296, 1373, 1816
Bst6I CTCTTC 2 cut(s) 678, 897
BstAFI CTTAAG 1 cut(s) 1129
BstAPI GCANNNNNTGC 2 cut(s) 159, 762
BstBAI YACGTR 1 cut(s) 1507
BstC8I GCNNGC 2 cut(s) 229, 1486
BstDEI CTNAG 5 cut(s) 9, 978, 1283, 1329, 1511
BstDSI CCRYGG 2 cut(s) 772, 842
BstF5I GGATG 7 cut(s) 312, 1030, 1258, 1429, 1444, 1786, 1797
BstFNI CGCG 1 cut(s) 876
BstH2I RGCGCY 1 cut(s) 301
BstHHI GCGC 3 cut(s) 300, 1004, 1559
BstKTI GATC 7 cut(s) 174, 744, 781, 871, 1204, 1597, 1675
BstMAI GTCTC 3 cut(s) 254, 1805, 1839
BstMBI GATC 7 cut(s) 171, 741, 778, 868, 1201, 1594, 1672
BstMWI GCNNNNNNNGC 5 cut(s) 117, 159, 465, 762, 882
BstNI CCWGG 1 cut(s) 1754
BstNSI RCATGY 3 cut(s) 255, 1182, 1310
BstSCI CCNGG 1 cut(s) 1752
BstSFI CTRYAG 2 cut(s) 118, 1210
BstUI CGCG 1 cut(s) 876
BstV1I GCAGC 1 cut(s) 165
BstV2I GAAGAC 1 cut(s) 791
BstXI CCANNNNNNTGG 1 cut(s) 1683
BsuI GTATCC 1 cut(s) 1529
BsuRI GGCC 2 cut(s) 768, 1752
BtgI CCRYGG 2 cut(s) 772, 842
BtgZI GCGATG 3 cut(s) 676, 857, 1414
BtsCI GGATG 7 cut(s) 312, 1030, 1258, 1429, 1444, 1786, 1797
BtsI GCAGTG 1 cut(s) 445
BtsIMutI CAGTG 5 cut(s) 37, 109, 445, 552, 628
BveI ACCTGC 2 cut(s) 58, 422
Cac8I GCNNGC 2 cut(s) 229, 1486
CaiI CAGNNNCTG 2 cut(s) 159, 1929
CciI TCATGA 2 cut(s) 31, 1198
CfoI GCGC 3 cut(s) 300, 1004, 1559
Cfr10I RCCGGY 1 cut(s) 565
Csp6I GTAC 5 cut(s) 249, 334, 1149, 1374, 1861
CviQI GTAC 5 cut(s) 249, 334, 1149, 1374, 1861
DdeI CTNAG 5 cut(s) 9, 978, 1283, 1329, 1511
DpnI GATC 7 cut(s) 173, 743, 780, 870, 1203, 1596, 1674
DpnII GATC 7 cut(s) 171, 741, 778, 868, 1201, 1594, 1672
Eam1104I CTCTTC 2 cut(s) 678, 897
EarI CTCTTC 2 cut(s) 678, 897
Eco130I CCWWGG 3 cut(s) 772, 842, 1542
Eco147I AGGCCT 1 cut(s) 1752
Eco31I GGTCTC 1 cut(s) 1805
Eco32I GATATC 1 cut(s) 446
Eco47III AGCGCT 1 cut(s) 299
Eco57I CTGAAG 1 cut(s) 1071
Eco72I CACGTG 1 cut(s) 1507
EcoRI GAATTC 1 cut(s) 305
EcoRII CCWGG 1 cut(s) 1752
EcoRV GATATC 1 cut(s) 446
EcoT14I CCWWGG 3 cut(s) 772, 842, 1542
EcoT22I ATGCAT 1 cut(s) 1312
ErhI CCWWGG 3 cut(s) 772, 842, 1542
FauNDI CATATG 1 cut(s) 790
FbaI TGATCA 1 cut(s) 868
FblI GTMKAC 2 cut(s) 983, 1590
Fnu4HI GCNGC 2 cut(s) 154, 766
FokI GGATG 7 cut(s) 299, 1037, 1245, 1416, 1431, 1793, 1804
Fsp4HI GCNGC 2 cut(s) 154, 766
FspBI CTAG 2 cut(s) 389, 1008
GlaI GCGC 3 cut(s) 299, 1003, 1558
GluI GCNGC 2 cut(s) 154, 766
GsuI CTGGAG 1 cut(s) 253
HaeII RGCGCY 1 cut(s) 301
HaeIII GGCC 2 cut(s) 768, 1752
HapII CCGG 3 cut(s) 566, 1760, 1789
HhaI GCGC 3 cut(s) 300, 1004, 1559
Hin6I GCGC 3 cut(s) 298, 1002, 1557
HinP1I GCGC 3 cut(s) 298, 1002, 1557
HincII GTYRAC 1 cut(s) 1591
HindII GTYRAC 1 cut(s) 1591
HinfI GANTC 5 cut(s) 84, 202, 908, 980, 1587
HpaII CCGG 3 cut(s) 566, 1760, 1789
HphI GGTGA 7 cut(s) 403, 409, 1093, 1430, 1455, 1631, 1885
Hpy166II GTNNAC 5 cut(s) 83, 514, 560, 984, 1591
Hpy188I TCNGA 4 cut(s) 979, 1514, 1739, 1748
Hpy188III TCNNGA 7 cut(s) 32, 280, 695, 834, 1199, 1836, 1885
Hpy8I GTNNAC 5 cut(s) 83, 514, 560, 984, 1591
Hpy99I CGWCG 2 cut(s) 1595, 1901
HpyAV CCTTC 8 cut(s) 192, 418, 424, 531, 1085, 1216, 1955, 1960
HpyCH4III ACNGT 6 cut(s) 632, 1214, 1250, 1296, 1373, 1816
HpyCH4IV ACGT 3 cut(s) 1273, 1318, 1506
HpyF10VI GCNNNNNNNGC 5 cut(s) 117, 159, 465, 762, 882
HpyF3I CTNAG 5 cut(s) 9, 978, 1283, 1329, 1511
HpySE526I ACGT 3 cut(s) 1273, 1318, 1506
HspAI GCGC 3 cut(s) 298, 1002, 1557
KpnI GGTACC 1 cut(s) 1152
Ksp22I TGATCA 1 cut(s) 868
Kzo9I GATC 7 cut(s) 171, 741, 778, 868, 1201, 1594, 1672
LmnI GCTCC 2 cut(s) 410, 503
Lsp1109I GCAGC 1 cut(s) 165
LweI GCATC 5 cut(s) 233, 1319, 1505, 1618, 1782
MaeI CTAG 2 cut(s) 389, 1008
MaeII ACGT 3 cut(s) 1273, 1318, 1506
MaeIII GTNAC 7 cut(s) 641, 1319, 1419, 1436, 1711, 1891, 1931
MalI GATC 7 cut(s) 173, 743, 780, 870, 1203, 1596, 1674
MboI GATC 7 cut(s) 171, 741, 778, 868, 1201, 1594, 1672
MfeI CAATTG 2 cut(s) 826, 1726
MhlI GDGCHC 3 cut(s) 39, 1512, 1737
MluCI AATT 9 cut(s) 89, 220, 305, 583, 737, 808, 826, 1357, 1726
MlyI GAGTC 3 cut(s) 78, 989, 1596
MmeI TCCRAC 1 cut(s) 1700
MnlI CCTC 9 cut(s) 428, 502, 779, 963, 1072, 1153, 1417, 1567, 1742
Mph1103I ATGCAT 1 cut(s) 1312
MseI TTAA 3 cut(s) 1130, 1356, 1938
MslI CAYNNNNRTG 2 cut(s) 192, 714
MspA1I CMGCKG 1 cut(s) 231
MspCI CTTAAG 1 cut(s) 1129
MspI CCGG 3 cut(s) 566, 1760, 1789
MspR9I CCNGG 1 cut(s) 1754
MunI CAATTG 2 cut(s) 826, 1726
Mva1269I GAATGC 2 cut(s) 470, 476
MvaI CCWGG 1 cut(s) 1754
MvnI CGCG 1 cut(s) 876
MwoI GCNNNNNNNGC 5 cut(s) 117, 159, 465, 762, 882
NcoI CCATGG 2 cut(s) 772, 842
NdeI CATATG 1 cut(s) 790
NdeII GATC 7 cut(s) 171, 741, 778, 868, 1201, 1594, 1672
NlaIV GGNNCC 4 cut(s) 6, 1071, 1150, 1758
NmuCI GTSAC 4 cut(s) 1419, 1436, 1891, 1931
NsiI ATGCAT 1 cut(s) 1312
NspI RCATGY 3 cut(s) 255, 1182, 1310
OliI CACNNNNGTG 1 cut(s) 192
PagI TCATGA 2 cut(s) 31, 1198
PaqCI CACCTGC 2 cut(s) 58, 422
PceI AGGCCT 1 cut(s) 1752
PciI ACATGT 1 cut(s) 251
PctI GAATGC 2 cut(s) 470, 476
PfeI GAWTC 2 cut(s) 202, 908
PkrI GCNGC 2 cut(s) 155, 767
PleI GAGTC 3 cut(s) 78, 988, 1595
PmaCI CACGTG 1 cut(s) 1507
PmlI CACGTG 1 cut(s) 1507
PpsI GAGTC 3 cut(s) 78, 988, 1595
Ppu21I YACGTR 1 cut(s) 1507
PscI ACATGT 1 cut(s) 251
PsiI TTATAA 1 cut(s) 1851
Psp6I CCWGG 1 cut(s) 1752
PspCI CACGTG 1 cut(s) 1507
PspGI CCWGG 1 cut(s) 1752
PspN4I GGNNCC 4 cut(s) 6, 1071, 1150, 1758
PsrI GAACNNNNNNTAC 2 cut(s) 958, 990
PstI CTGCAG 1 cut(s) 122
PstNI CAGNNNCTG 2 cut(s) 159, 1929
PvuII CAGCTG 1 cut(s) 231
RsaI GTAC 5 cut(s) 250, 335, 1150, 1375, 1862
RsaNI GTAC 5 cut(s) 249, 334, 1149, 1374, 1861
RseI CAYNNNNRTG 2 cut(s) 192, 714
SalI GTCGAC 1 cut(s) 1589
SaqAI TTAA 3 cut(s) 1130, 1356, 1938
SatI GCNGC 2 cut(s) 154, 766
Sau3AI GATC 7 cut(s) 171, 741, 778, 868, 1201, 1594, 1672
SchI GAGTC 3 cut(s) 78, 989, 1596
ScrFI CCNGG 1 cut(s) 1754
SduI GDGCHC 3 cut(s) 39, 1512, 1737
SfaNI GCATC 5 cut(s) 233, 1319, 1505, 1618, 1782
SfcI CTRYAG 2 cut(s) 118, 1210
SmiMI CAYNNNNRTG 2 cut(s) 192, 714
SmlI CTYRAG 2 cut(s) 383, 1129
SmoI CTYRAG 2 cut(s) 383, 1129
Sse9I AATT 9 cut(s) 89, 220, 305, 583, 737, 808, 826, 1357, 1726
SseBI AGGCCT 1 cut(s) 1752
SsiI CCGC 3 cut(s) 636, 765, 862
SspI AATATT 1 cut(s) 1643
SspMI CTAG 2 cut(s) 389, 1008
StuI AGGCCT 1 cut(s) 1752
StyD4I CCNGG 1 cut(s) 1752
StyI CCWWGG 3 cut(s) 772, 842, 1542
TaaI ACNGT 6 cut(s) 632, 1214, 1250, 1296, 1373, 1816
TaiI ACGT 3 cut(s) 1276, 1321, 1509
TaqI TCGA 4 cut(s) 781, 1077, 1590, 1837
TasI AATT 9 cut(s) 89, 220, 305, 583, 737, 808, 826, 1357, 1726
TauI GCSGC 1 cut(s) 768
TfiI GAWTC 2 cut(s) 202, 908
Tru1I TTAA 3 cut(s) 1130, 1356, 1938
Tru9I TTAA 3 cut(s) 1130, 1356, 1938
TscAI CASTG 5 cut(s) 44, 109, 445, 559, 635
TseFI GTSAC 4 cut(s) 1419, 1436, 1891, 1931
TseI GCWGC 1 cut(s) 153
Tsp45I GTSAC 4 cut(s) 1419, 1436, 1891, 1931
TspDTI ATGAA 8 cut(s) 20, 303, 477, 732, 980, 1052, 1074, 1354
TspGWI ACGGA 1 cut(s) 1371
TspRI CASTG 5 cut(s) 44, 109, 445, 559, 635
Vha464I CTTAAG 1 cut(s) 1129
XapI RAATTY 2 cut(s) 220, 305
XceI RCATGY 3 cut(s) 255, 1182, 1310
XmiI GTMKAC 2 cut(s) 983, 1590
XspI CTAG 2 cut(s) 389, 1008
Zsp2I ATGCAT 1 cut(s) 1312
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.