FvH4_7g18770

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000226
Physical Location & Seq
Forward (+)
15590907 .. 15594149
3243 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g18770.t1

Sequence Viewer

Length: 2544 bp
ATGGATGAGCAGCTTAAACACTTCAGTCATGAGCATCCCTTGATGTACAAGGAAGAGTCGCCACCGAAAAATGAAGCATCGGGTGAACCAGTTTCATGCTCCGCCTGTGGCGAGCCAGTGCTTGGTCCTAACTACAGTTGTAATCAATGTTCCGACGAATTCATCATCCTCCACAAGCCATGCGCTCAGCTAGGCAGAGAGATCCAGCACCCGATGCACAATCACCCACTTACTATTCTCACAAGGGACGCCAGACAATATGAAGAGTTTTTGTGTGATATTTGTCATGCACTATCCTACGGAAAATCTTACTCTTGTTCCAAATGTGGATTTAATCTTGACCTGAAATGTGCTGCCGGTTTGACCAACATAGTTTGTATAGAACACTTCAGCCACCAGCATTTACTGCGTTTCATTGAAAATCCATCTCAGGCTAAGCGTGGTTCACCAGCTCTCTGCATTGGGTGTCTAGAGCCGGTGCTTGGTCCTAGTTACTATTGTGATCGGGCAATGACATATTCAACATGCTCCGTTTTCCTGCATAAATCATGTGCAGAGTTACCTCTTGAGATCCAACACCCAATGCACCGCCAACACTCGCTTATTCTCAACCTGAATCGAGCAAGAGATCATCAATGTGATGCCTGTGACAAAGACTGTGGCCGCAGATTCAATTACAGTTGTTTCCAATGTGGTTTCAACCTCGACCTCAGATGTGCTTCCGAAGAAGGCTACAAACATTTCAGTCATCAGCATCCATTAATGTTCAAGAAGGGGGGAGGAAACGATAAGAGGAAAGGATATACTGTTCCTCTAGTTGTTTGCGATGGGTGTCACGACCCAATACTTGGCCCTCGTTACACTTGCATCAATAGGTACCGACGTCGCAGATGCAGCTTCAATCTCCACAAGTCATGTGCAGACTTACCCGGTGAGATCCAGCACCCACTGCACCGTCAACATTCACTTTTTCTTCTCAATACAATTCAAGATATCAGAATTCGCTGCTTGTGTAATGCATGCAACAAGGTTTGCCGATACCGCTACAATTGTTCTGTATGTGATTTCAACCTTCACCTGAAATGTGCCTCCAAATGGCAAAACATCCTTGATGACTCTCACCAGCATCAGTACATTGTCCCACCCATGGAAATGATCGACCTCCAAATCAATTGTCACATTTGTGGTGACTACTGGACTGGCAGCAGAGTCTTTTACACCTGTAGCATCTGCCAGCTCTTGGTCCATGAGGAATGTGCTTCATTACCAAGCGACACCAAAATTCCCGGGCACCAACACCGCCTCAAGCTAACCTGGTTCCTTCAAGAAATTTACCCCAAGGAAGAATTTTGTAAAATCTGCTCTACAAATATTGGCAAGTCTCCTACCGTATATTATTGCCAGGAATGTTGCGAATATGTTGCCCACCCTACATGCATCACAGTTGAGTACTTCCAGAAAGAAGAAAACCAAGGCAGAAGCCTTGGTCCTATTAAAAAAAAAGACAGAAGCCTTGACATTAATCACATTACTGAAGGTGATGATTACGAGTCTGATGATGCTGAGGAGATCAGACACTTCAGTCATCAACATCTTTTAGTCTCTAAAGATTATCATCACGAGGTTAAGGATGACAGGCTACTTACTTGTCAGGGTTGTGTTCGACCCATCACTGAAGACTTCTACAGCTGCACTAAACAAGAAGAAGAGTCTTGCCAGTTCTATCTACACAAAATATGTGCTCGGTTACCGGAAAAGATGCTTCTCCCTTTGCTTCACCAACACCAGTTTACACTCCACTCCCAGGCTCCTTCTATTGACGGCGTGTTTCAGTGTTCTATGTGTGGTATCTTTCACCATGGATTTGTCTACAGTTGTGATAAATGTGCTTTGCAAACTGGCGGAAACCTTCTCCTCGACAGTGAGTGCATTATGTATTGGGAGAACAGGGATCTTAAACATGAGTCTCATGCTCACCGCCTCCTCCTCGACATGAATTGGGAGGAGGACATCTGTTGCAGGGGTTGCGGTTCCAAAATATTTTTCTGCTTCAGTTGTAAGAGATGCAATTTTCATCTTTGCATAGCCTGTGTTAGATTACCTCTTACTGGTACGCATCGATACGACAAGCATGTTCTAAAGCTCACCTATGCTAGTAGAATTGAAGACGAAGTTGTAGGTTACTACTGTGAGATATGTGAAGGGAAAAGGGATCCAGCACATTGGTTCTACTGGTGCAAAGATTGCAACTTTGACTGTCATCCTCATTGCATCATAGGGAGGTATCCCCGAGTTAAGTTGGGGAGCACTTACAAGCACAACGATCATGTCCAACACCAAGTCACTCTTGTTAGCAAGTGGAAGAGCCCCATTCGGGGCGATAAGAGGGACAACATTCTTCCTTGTGAGAGGTGCCATGAACTTTGCCAAGGATTAGTATTTGAATGCAGAGAATGCAATATCAATTTCCATCGAGATGGATGTTGTGGAGCTACAGATTCAGCAAGTTCTAGCAGGTCACCTCAGATCGAAGAGCTAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

848

Amino Acids

97.95

Weight (kDa)

6.7

Isoelectric Point (pI)

54.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 8 - 62 1.7e-07 C1 domain
C1_2 PF03107 72 - 118 8.6e-09 C1 domain
C1_2 PF03107 195 - 240 5.5e-08 C1 domain
C1_2 PF03107 316 - 363 1.6e-06 C1 domain
C1_2 PF03107 373 - 420 1.2e-06 C1 domain
C1_2 PF03107 430 - 480 1e-07 C1 domain
C1_2 PF03107 707 - 758 4.8e-06 C1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1581
AatII GACGTC 1 cut(s) 886
Acc36I ACCTGC 1 cut(s) 2505
Acc65I GGTACC 1 cut(s) 876
AccB1I GGYRCC 3 cut(s) 876, 1290, 2412
AccB7I CCANNNNNTGG 3 cut(s) 122, 848, 1240
AccI GTMKAC 1 cut(s) 1869
AciI CCGC 8 cut(s) 102, 589, 664, 1042, 1300, 1902, 1978, 2028
AclWI GGATC 6 cut(s) 196, 565, 931, 1959, 2207, 2220
AcoI YGGCCR 1 cut(s) 661
AcsI RAATTY 5 cut(s) 158, 999, 1281, 1329, 1346
AcuI CTGAAG 6 cut(s) 7, 373, 1554, 1564, 1695, 2035
AcyI GRCGYC 2 cut(s) 249, 883
AfaI GTAC 5 cut(s) 47, 878, 1133, 1451, 2113
AjnI CCWGG 3 cut(s) 1313, 1401, 1803
AjuI GAANNNNNNNTTGG 2 cut(s) 2027, 2059
AleI CACNNNNGTG 1 cut(s) 1182
AloI GAACNNNNNNTCC 2 cut(s) 792, 824
Alw21I GWGCWC 2 cut(s) 1744, 2309
Alw26I GTCTC 3 cut(s) 1386, 1606, 1971
AlwI GGATC 6 cut(s) 196, 565, 931, 1959, 2207, 2220
Ama87I CYCGRG 2 cut(s) 1286, 2289
AoxI GGCC 2 cut(s) 661, 850
ApeKI GCWGC 6 cut(s) 10, 353, 894, 1005, 1203, 1689
ApoI RAATTY 5 cut(s) 158, 999, 1281, 1329, 1346
ArsI GACNNNNNNTTYG 2 cut(s) 1159, 1191
AseI ATTAAT 2 cut(s) 761, 1521
Asp718I GGTACC 1 cut(s) 876
AspLEI GCGC 1 cut(s) 185
AspS9I GGNCC 5 cut(s) 125, 485, 851, 1243, 1487
AsuC2I CCSGG 3 cut(s) 930, 1287, 1288
AvaI CYCGRG 2 cut(s) 1286, 2289
AvaII GGWCC 4 cut(s) 125, 485, 1243, 1487
BaeGI GKGCMC 1 cut(s) 1293
BaeI ACNNNNGTAYC 2 cut(s) 868, 901
BamHI GGATCC 1 cut(s) 2212
BanI GGYRCC 3 cut(s) 876, 1290, 2412
BanII GRGCYC 1 cut(s) 2369
BauI CACGAG 1 cut(s) 1619
BbsI GAAGAC 2 cut(s) 1683, 2172
Bbv12I GWGCWC 2 cut(s) 1744, 2309
BbvCI CCTCAGC 1 cut(s) 1563
BbvI GCAGC 6 cut(s) 22, 340, 906, 992, 1215, 1676
BccI CCATC 5 cut(s) 433, 821, 1676, 2471, 2478
BceAI ACGGC 1 cut(s) 1837
BcgI CGANNNNNNTGC 2 cut(s) 1403, 1437
BciT130I CCWGG 3 cut(s) 1315, 1403, 1805
BciVI GTATCC 1 cut(s) 2295
BcnI CCSGG 3 cut(s) 930, 1287, 1288
BcoDI GTCTC 3 cut(s) 1386, 1606, 1971
BfaI CTAG 6 cut(s) 191, 470, 489, 815, 2154, 2511
BfmI CTRYAG 5 cut(s) 133, 1222, 1684, 1870, 2493
BfuAI ACCTGC 1 cut(s) 2505
BfuI GTATCC 1 cut(s) 2295
BisI GCNGC 7 cut(s) 11, 354, 664, 895, 1006, 1204, 1690
BlpI GCTNAGC 2 cut(s) 186, 435
BlsI GCNGC 7 cut(s) 12, 355, 665, 896, 1007, 1205, 1691
BmcAI AGTACT 1 cut(s) 1451
Bme1390I CCNGG 6 cut(s) 930, 1287, 1288, 1315, 1403, 1805
Bme18I GGWCC 4 cut(s) 125, 485, 1243, 1487
BmeT110I CYCGRG 2 cut(s) 1286, 2289
BmgT120I GGNCC 5 cut(s) 125, 485, 851, 1243, 1487
BmiI GGNNCC 7 cut(s) 878, 1292, 1319, 1809, 2032, 2214, 2414
BmrFI CCNGG 6 cut(s) 930, 1287, 1288, 1315, 1403, 1805
BpiI GAAGAC 2 cut(s) 1683, 2172
Bpu10I CCTNAGC 1 cut(s) 1563
Bpu1102I GCTNAGC 2 cut(s) 186, 435
BpuEI CTTGAG 2 cut(s) 587, 1289
BpuMI CCSGG 3 cut(s) 930, 1287, 1288
Bsa29I ATCGAT 1 cut(s) 2119
BsaBI GATNNNNATC 1 cut(s) 1614
BsaHI GRCGYC 2 cut(s) 249, 883
BsaJI CCNNGG 8 cut(s) 1146, 1286, 1338, 1471, 1483, 1803, 1858, 2428
BsaWI WCCGGW 1 cut(s) 1750
Bse118I RCCGGY 2 cut(s) 356, 475
Bse1I ACTGG 9 cut(s) 89, 116, 1199, 1204, 1717, 1786, 1903, 2113, 2237
Bse3DI GCAATG 2 cut(s) 516, 2266
Bse8I GATNNNNATC 1 cut(s) 1614
BseBI CCWGG 3 cut(s) 1315, 1403, 1805
BseCI ATCGAT 1 cut(s) 2119
BseDI CCNNGG 8 cut(s) 1146, 1286, 1338, 1471, 1483, 1803, 1858, 2428
BseGI GGATG 8 cut(s) 10, 34, 165, 754, 1104, 1636, 2260, 2486
BseJI GATNNNNATC 1 cut(s) 1614
BseMI GCAATG 2 cut(s) 516, 2266
BseMII CTCAG 5 cut(s) 200, 443, 724, 1554, 2537
BseNI ACTGG 9 cut(s) 89, 116, 1199, 1204, 1717, 1786, 1903, 2113, 2237
BseRI GAGGAG 5 cut(s) 1580, 1904, 1973, 1976, 2018
BseSI GKGCMC 1 cut(s) 1293
BseXI GCAGC 6 cut(s) 22, 340, 906, 992, 1215, 1676
BsgI GTGCAG 4 cut(s) 573, 935, 939, 1675
BshFI GGCC 2 cut(s) 663, 852
BshNI GGYRCC 3 cut(s) 876, 1290, 2412
BshVI ATCGAT 1 cut(s) 2119
BsiHKAI GWGCWC 2 cut(s) 1744, 2309
BsiHKCI CYCGRG 2 cut(s) 1286, 2289
BsiSI CCGG 5 cut(s) 357, 476, 930, 1287, 1751
BslFI GGGAC 3 cut(s) 260, 1124, 2402
BsmAI GTCTC 3 cut(s) 1386, 1606, 1971
BsmFI GGGAC 3 cut(s) 260, 1124, 2402
BsmI GAATGC 2 cut(s) 2450, 2459
BsnI GGCC 2 cut(s) 663, 852
BsoBI CYCGRG 2 cut(s) 1286, 2289
Bsp1286I GDGCHC 4 cut(s) 1293, 1744, 2309, 2369
Bsp1407I TGTACA 1 cut(s) 45
Bsp1720I GCTNAGC 2 cut(s) 186, 435
Bsp19I CCATGG 2 cut(s) 1146, 1858
BspACI CCGC 8 cut(s) 102, 589, 664, 1042, 1300, 1902, 1978, 2028
BspANI GGCC 2 cut(s) 663, 852
BspCNI CTCAG 5 cut(s) 199, 442, 723, 1555, 2536
BspDI ATCGAT 1 cut(s) 2119
BspHI TCATGA 1 cut(s) 28
BspLI GGNNCC 7 cut(s) 878, 1292, 1319, 1809, 2032, 2214, 2414
BspMI ACCTGC 1 cut(s) 2505
BspPI GGATC 6 cut(s) 196, 565, 931, 1959, 2207, 2220
BspQI GCTCTTC 2 cut(s) 2357, 2526
BspT107I GGYRCC 3 cut(s) 876, 1290, 2412
BsrDI GCAATG 2 cut(s) 516, 2266
BsrFI RCCGGY 2 cut(s) 356, 475
BsrGI TGTACA 1 cut(s) 45
BsrI ACTGG 9 cut(s) 89, 116, 1199, 1204, 1717, 1786, 1903, 2113, 2237
BssAI RCCGGY 2 cut(s) 356, 475
BssECI CCNNGG 8 cut(s) 1146, 1286, 1338, 1471, 1483, 1803, 1858, 2428
BssNI GRCGYC 2 cut(s) 249, 883
BssSI CACGAG 1 cut(s) 1619
BssT1I CCWWGG 6 cut(s) 1146, 1338, 1471, 1483, 1858, 2428
Bst2BI CACGAG 1 cut(s) 1619
Bst2UI CCWGG 3 cut(s) 1315, 1403, 1805
Bst6I CTCTTC 5 cut(s) 48, 258, 1701, 2357, 2526
BstACI GRCGYC 2 cut(s) 249, 883
BstAPI GCANNNNNTGC 6 cut(s) 214, 406, 949, 2025, 2244, 2454
BstAUI TGTACA 1 cut(s) 45
BstC8I GCNNGC 3 cut(s) 113, 1021, 1235
BstDEI CTNAG 7 cut(s) 186, 429, 435, 710, 1563, 2523, 2537
BstDSI CCRYGG 2 cut(s) 1146, 1858
BstEII GGTNACC 2 cut(s) 1746, 2517
BstF5I GGATG 8 cut(s) 10, 34, 165, 754, 1104, 1636, 2260, 2486
BstHHI GCGC 1 cut(s) 185
BstMAI GTCTC 3 cut(s) 1386, 1606, 1971
BstMWI GCNNNNNNNGC 8 cut(s) 214, 406, 894, 949, 1041, 2025, 2244, 2454
BstNI CCWGG 3 cut(s) 1315, 1403, 1805
BstNSI RCATGY 4 cut(s) 528, 1023, 1437, 2135
BstPI GGTNACC 2 cut(s) 1746, 2517
BstSCI CCNGG 6 cut(s) 928, 1285, 1286, 1313, 1401, 1803
BstSFI CTRYAG 5 cut(s) 133, 1222, 1684, 1870, 2493
BstSLI GKGCMC 1 cut(s) 1293
BstV1I GCAGC 6 cut(s) 22, 340, 906, 992, 1215, 1676
BstV2I GAAGAC 2 cut(s) 1683, 2172
BstX2I RGATCY 5 cut(s) 201, 570, 936, 1951, 2212
BstXI CCANNNNNNTGG 2 cut(s) 2223, 2477
BstYI RGATCY 5 cut(s) 201, 570, 936, 1951, 2212
Bsu15I ATCGAT 1 cut(s) 2119
BsuI GTATCC 1 cut(s) 2295
BsuRI GGCC 2 cut(s) 663, 852
BsuTUI ATCGAT 1 cut(s) 2119
BtgI CCRYGG 2 cut(s) 1146, 1858
BtgZI GCGATG 1 cut(s) 840
BtsCI GGATG 8 cut(s) 10, 34, 165, 754, 1104, 1636, 2260, 2486
BtsI GCAGTG 1 cut(s) 947
BtsIMutI CAGTG 5 cut(s) 123, 947, 1671, 1838, 1927
BveI ACCTGC 1 cut(s) 2505
Cac8I GCNNGC 3 cut(s) 113, 1021, 1235
CciI TCATGA 1 cut(s) 28
CfoI GCGC 1 cut(s) 185
Cfr10I RCCGGY 2 cut(s) 356, 475
Cfr13I GGNCC 5 cut(s) 125, 485, 851, 1243, 1487
Cfr9I CCCGGG 1 cut(s) 1286
ClaI ATCGAT 1 cut(s) 2119
CseI GACGC 1 cut(s) 257
CsiI ACCWGGT 1 cut(s) 1313
Csp6I GTAC 5 cut(s) 46, 877, 1132, 1450, 2112
CspCI CAANNNNNGTGG 2 cut(s) 640, 675
CviQI GTAC 5 cut(s) 46, 877, 1132, 1450, 2112
DdeI CTNAG 7 cut(s) 186, 429, 435, 710, 1563, 2523, 2537
DrdI GACNNNNNNGTC 1 cut(s) 1581
DseDI GACNNNNNNGTC 1 cut(s) 1581
EaeI YGGCCR 1 cut(s) 661
Eam1104I CTCTTC 5 cut(s) 48, 258, 1701, 2357, 2526
EarI CTCTTC 5 cut(s) 48, 258, 1701, 2357, 2526
EciI GGCGGA 2 cut(s) 91, 1917
Eco130I CCWWGG 6 cut(s) 1146, 1338, 1471, 1483, 1858, 2428
Eco24I GRGCYC 1 cut(s) 2369
Eco32I GATATC 1 cut(s) 994
Eco47I GGWCC 4 cut(s) 125, 485, 1243, 1487
Eco57I CTGAAG 6 cut(s) 7, 373, 1554, 1564, 1695, 2035
Eco88I CYCGRG 2 cut(s) 1286, 2289
Eco91I GGTNACC 2 cut(s) 1746, 2517
EcoO65I GGTNACC 2 cut(s) 1746, 2517
EcoRI GAATTC 2 cut(s) 158, 999
EcoRII CCWGG 3 cut(s) 1313, 1401, 1803
EcoRV GATATC 1 cut(s) 994
EcoT14I CCWWGG 6 cut(s) 1146, 1338, 1471, 1483, 1858, 2428
EcoT22I ATGCAT 2 cut(s) 1021, 1439
EcoT38I GRGCYC 1 cut(s) 2369
ErhI CCWWGG 6 cut(s) 1146, 1338, 1471, 1483, 1858, 2428
FalI AAGNNNNNCTT 2 cut(s) 2331, 2363
FaqI GGGAC 3 cut(s) 260, 1124, 2402
FblI GTMKAC 1 cut(s) 1869
Fnu4HI GCNGC 7 cut(s) 11, 354, 664, 895, 1006, 1204, 1690
FokI GGATG 8 cut(s) 17, 21, 152, 741, 1091, 1643, 2247, 2493
FriOI GRGCYC 1 cut(s) 2369
Fsp4HI GCNGC 7 cut(s) 11, 354, 664, 895, 1006, 1204, 1690
FspBI CTAG 6 cut(s) 191, 470, 489, 815, 2154, 2511
GlaI GCGC 1 cut(s) 184
GluI GCNGC 7 cut(s) 11, 354, 664, 895, 1006, 1204, 1690
HaeIII GGCC 2 cut(s) 663, 852
HapII CCGG 5 cut(s) 357, 476, 930, 1287, 1751
HgaI GACGC 1 cut(s) 257
HhaI GCGC 1 cut(s) 185
Hin1I GRCGYC 2 cut(s) 249, 883
Hin6I GCGC 1 cut(s) 183
HinP1I GCGC 1 cut(s) 183
HincII GTYRAC 1 cut(s) 959
HindII GTYRAC 1 cut(s) 959
HinfI GANTC 9 cut(s) 56, 616, 669, 1115, 1209, 1550, 1709, 1964, 2498
HpaII CCGG 5 cut(s) 357, 476, 930, 1287, 1751
Hpy166II GTNNAC 5 cut(s) 86, 446, 959, 1791, 1870
Hpy188I TCNGA 7 cut(s) 154, 713, 724, 998, 1555, 1574, 2526
Hpy8I GTNNAC 5 cut(s) 86, 446, 959, 1791, 1870
Hpy99I CGWCG 3 cut(s) 158, 885, 888
HpyAV CCTTC 8 cut(s) 722, 766, 1082, 1331, 1529, 1821, 1919, 2195
HpyCH4IV ACGT 1 cut(s) 883
HpyF10VI GCNNNNNNNGC 8 cut(s) 214, 406, 894, 949, 1041, 2025, 2244, 2454
HpyF3I CTNAG 7 cut(s) 186, 429, 435, 710, 1563, 2523, 2537
HpySE526I ACGT 1 cut(s) 883
Hsp92I GRCGYC 2 cut(s) 249, 883
HspAI GCGC 1 cut(s) 183
KpnI GGTACC 1 cut(s) 880
LguI GCTCTTC 2 cut(s) 2357, 2526
LmnI GCTCC 5 cut(s) 104, 533, 1813, 2304, 2489
Lsp1109I GCAGC 6 cut(s) 22, 340, 906, 992, 1215, 1676
MabI ACCWGGT 1 cut(s) 1313
MaeI CTAG 6 cut(s) 191, 470, 489, 815, 2154, 2511
MaeII ACGT 1 cut(s) 883
MfeI CAATTG 2 cut(s) 1048, 1171
MflI RGATCY 5 cut(s) 201, 570, 936, 1951, 2212
MhlI GDGCHC 4 cut(s) 1293, 1744, 2309, 2369
MlyI GAGTC 6 cut(s) 65, 1109, 1218, 1559, 1718, 1973
MmeI TCCRAC 3 cut(s) 177, 598, 2356
Mph1103I ATGCAT 2 cut(s) 1021, 1439
MseI TTAA 9 cut(s) 15, 333, 761, 1494, 1521, 1626, 1956, 2295, 2542
MslI CAYNNNNRTG 4 cut(s) 636, 1151, 1182, 2475
MspA1I CMGCKG 1 cut(s) 1689
MspI CCGG 5 cut(s) 357, 476, 930, 1287, 1751
MspR9I CCNGG 6 cut(s) 930, 1287, 1288, 1315, 1403, 1805
MunI CAATTG 2 cut(s) 1048, 1171
Mva1269I GAATGC 2 cut(s) 2450, 2459
MvaI CCWGG 3 cut(s) 1315, 1403, 1805
MwoI GCNNNNNNNGC 8 cut(s) 214, 406, 894, 949, 1041, 2025, 2244, 2454
NciI CCSGG 3 cut(s) 930, 1287, 1288
NcoI CCATGG 2 cut(s) 1146, 1858
NlaIV GGNNCC 7 cut(s) 878, 1292, 1319, 1809, 2032, 2214, 2414
NmuCI GTSAC 6 cut(s) 647, 833, 1175, 1187, 2341, 2517
NsiI ATGCAT 2 cut(s) 1021, 1439
NspI RCATGY 4 cut(s) 528, 1023, 1437, 2135
OliI CACNNNNGTG 1 cut(s) 1182
PaeI GCATGC 1 cut(s) 1023
PagI TCATGA 1 cut(s) 28
PciSI GCTCTTC 2 cut(s) 2357, 2526
PctI GAATGC 2 cut(s) 2450, 2459
PfeI GAWTC 3 cut(s) 616, 669, 2498
PflMI CCANNNNNTGG 3 cut(s) 122, 848, 1240
PkrI GCNGC 7 cut(s) 12, 355, 665, 896, 1007, 1205, 1691
PleI GAGTC 6 cut(s) 64, 1109, 1217, 1558, 1717, 1972
PpsI GAGTC 6 cut(s) 64, 1109, 1217, 1558, 1717, 1972
PshBI ATTAAT 2 cut(s) 761, 1521
Psp6I CCWGG 3 cut(s) 1313, 1401, 1803
PspEI GGTNACC 2 cut(s) 1746, 2517
PspGI CCWGG 3 cut(s) 1313, 1401, 1803
PspN4I GGNNCC 7 cut(s) 878, 1292, 1319, 1809, 2032, 2214, 2414
PspPI GGNCC 5 cut(s) 125, 485, 851, 1243, 1487
PsrI GAACNNNNNNTAC 2 cut(s) 133, 165
PsuI RGATCY 5 cut(s) 201, 570, 936, 1951, 2212
PvuII CAGCTG 1 cut(s) 1689
RsaI GTAC 5 cut(s) 47, 878, 1133, 1451, 2113
RsaNI GTAC 5 cut(s) 46, 877, 1132, 1450, 2112
RseI CAYNNNNRTG 4 cut(s) 636, 1151, 1182, 2475
SapI GCTCTTC 2 cut(s) 2357, 2526
SaqAI TTAA 9 cut(s) 15, 333, 761, 1494, 1521, 1626, 1956, 2295, 2542
SatI GCNGC 7 cut(s) 11, 354, 664, 895, 1006, 1204, 1690
Sau96I GGNCC 5 cut(s) 125, 485, 851, 1243, 1487
ScaI AGTACT 1 cut(s) 1451
SchI GAGTC 6 cut(s) 65, 1109, 1218, 1559, 1718, 1973
ScrFI CCNGG 6 cut(s) 930, 1287, 1288, 1315, 1403, 1805
SduI GDGCHC 4 cut(s) 1293, 1744, 2309, 2369
SexAI ACCWGGT 1 cut(s) 1313
SfcI CTRYAG 5 cut(s) 133, 1222, 1684, 1870, 2493
SinI GGWCC 4 cut(s) 125, 485, 1243, 1487
SmaI CCCGGG 1 cut(s) 1288
SmiMI CAYNNNNRTG 4 cut(s) 636, 1151, 1182, 2475
SmlI CTYRAG 2 cut(s) 566, 1304
SmoI CTYRAG 2 cut(s) 566, 1304
SphI GCATGC 1 cut(s) 1023
SsiI CCGC 8 cut(s) 102, 589, 664, 1042, 1300, 1902, 1978, 2028
SspI AATATT 2 cut(s) 1372, 2040
SspMI CTAG 6 cut(s) 191, 470, 489, 815, 2154, 2511
StyD4I CCNGG 6 cut(s) 928, 1285, 1286, 1313, 1401, 1803
StyI CCWWGG 6 cut(s) 1146, 1338, 1471, 1483, 1858, 2428
TaiI ACGT 1 cut(s) 886
TaqI TCGA 9 cut(s) 619, 705, 1158, 1663, 1917, 1989, 2119, 2473, 2529
TatI WGTACW 3 cut(s) 45, 1131, 1449
TauI GCSGC 1 cut(s) 666
TfiI GAWTC 3 cut(s) 616, 669, 2498
Tru1I TTAA 9 cut(s) 15, 333, 761, 1494, 1521, 1626, 1956, 2295, 2542
Tru9I TTAA 9 cut(s) 15, 333, 761, 1494, 1521, 1626, 1956, 2295, 2542
TscAI CASTG 5 cut(s) 123, 954, 1678, 1838, 1927
TseFI GTSAC 6 cut(s) 647, 833, 1175, 1187, 2341, 2517
TseI GCWGC 6 cut(s) 10, 353, 894, 1005, 1203, 1689
Tsp45I GTSAC 6 cut(s) 647, 833, 1175, 1187, 2341, 2517
TspDTI ATGAA 9 cut(s) 84, 87, 151, 276, 403, 1251, 2009, 2063, 2433
TspGWI ACGGA 2 cut(s) 315, 520
TspMI CCCGGG 1 cut(s) 1286
TspRI CASTG 5 cut(s) 123, 954, 1678, 1838, 1927
Van91I CCANNNNNTGG 3 cut(s) 122, 848, 1240
VpaK11BI GGWCC 4 cut(s) 125, 485, 1243, 1487
VspI ATTAAT 2 cut(s) 761, 1521
XapI RAATTY 5 cut(s) 158, 999, 1281, 1329, 1346
XbaI TCTAGA 1 cut(s) 469
XceI RCATGY 4 cut(s) 528, 1023, 1437, 2135
XmaI CCCGGG 1 cut(s) 1286
XmiI GTMKAC 1 cut(s) 1869
XspI CTAG 6 cut(s) 191, 470, 489, 815, 2154, 2511
ZraI GACGTC 1 cut(s) 884
ZrmI AGTACT 1 cut(s) 1451
Zsp2I ATGCAT 2 cut(s) 1021, 1439
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.