BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C1_2 | PF03107 | 7 - 47 | 7.9e-09 | C1 domain |
| C1_2 | PF03107 | 61 - 109 | 4.6e-06 | C1 domain |
| C1_2 | PF03107 | 176 - 224 | 1.8e-09 | C1 domain |
| C1_2 | PF03107 | 238 - 280 | 1e-12 | C1 domain |
| C1_2 | PF03107 | 290 - 337 | 2.2e-07 | C1 domain |
| C1_2 | PF03107 | 373 - 420 | 5.9e-11 | C1 domain |
| C1_2 | PF03107 | 538 - 587 | 2.1e-13 | C1 domain |
| C1-like_CT | PF22926 | 607 - 647 | 2.8e-13 | C1 domain-like, C-terminal |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 670 |
| AccB1I | GGYRCC | 1 cut(s) | 369 |
| AccI | GTMKAC | 2 cut(s) | 1958, 2042 |
| AccII | CGCG | 1 cut(s) | 882 |
| AciI | CCGC | 8 cut(s) | 26, 108, 258, 603, 880, 1662, 1734, 1911 |
| AclWI | GGATC | 2 cut(s) | 326, 578 |
| AcsI | RAATTY | 1 cut(s) | 620 |
| AcuI | CTGAAG | 1 cut(s) | 1077 |
| AcvI | CACGTG | 1 cut(s) | 851 |
| AdeI | CACNNNGTG | 1 cut(s) | 1007 |
| AfaI | GTAC | 6 cut(s) | 142, 240, 714, 1053, 1616, 1761 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1990 |
| AflIII | ACRYGT | 1 cut(s) | 850 |
| AjiI | CACGTC | 1 cut(s) | 2029 |
| AjnI | CCWGG | 1 cut(s) | 1879 |
| AleI | CACNNNNGTG | 1 cut(s) | 1809 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1167, 1199 |
| Alw21I | GWGCWC | 5 cut(s) | 226, 571, 841, 1044, 1295 |
| Alw26I | GTCTC | 2 cut(s) | 1700, 1945 |
| AlwI | GGATC | 2 cut(s) | 326, 578 |
| ApeKI | GCWGC | 2 cut(s) | 491, 1233 |
| ApoI | RAATTY | 1 cut(s) | 620 |
| AspA2I | CCTAGG | 1 cut(s) | 1540 |
| AspLEI | GCGC | 2 cut(s) | 491, 671 |
| AsuHPI | GGTGA | 8 cut(s) | 104, 122, 501, 550, 794, 860, 1658, 1823 |
| AsuII | TTCGAA | 3 cut(s) | 153, 174, 1317 |
| AvrII | CCTAGG | 1 cut(s) | 1540 |
| BaeGI | GKGCMC | 1 cut(s) | 346 |
| BanI | GGYRCC | 1 cut(s) | 369 |
| BanII | GRGCYC | 4 cut(s) | 226, 793, 1044, 1295 |
| BbrPI | CACGTG | 1 cut(s) | 851 |
| BbsI | GAAGAC | 2 cut(s) | 269, 615 |
| Bbv12I | GWGCWC | 5 cut(s) | 226, 571, 841, 1044, 1295 |
| BbvCI | CCTCAGC | 1 cut(s) | 1142 |
| BbvI | GCAGC | 2 cut(s) | 478, 1245 |
| BccI | CCATC | 3 cut(s) | 50, 437, 1040 |
| BceAI | ACGGC | 2 cut(s) | 349, 1924 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1414, 1448, 1836, 1870 |
| BciT130I | CCWGG | 1 cut(s) | 1881 |
| BciVI | GTATCC | 2 cut(s) | 46, 906 |
| BclI | TGATCA | 1 cut(s) | 1621 |
| BcoDI | GTCTC | 2 cut(s) | 1700, 1945 |
| BfaI | CTAG | 2 cut(s) | 497, 1541 |
| BfuI | GTATCC | 2 cut(s) | 46, 906 |
| BglII | AGATCT | 1 cut(s) | 1838 |
| BisI | GCNGC | 3 cut(s) | 492, 1234, 1663 |
| BlnI | CCTAGG | 1 cut(s) | 1540 |
| BlsI | GCNGC | 3 cut(s) | 493, 1235, 1664 |
| Bme1390I | CCNGG | 1 cut(s) | 1881 |
| BmgBI | CACGTC | 1 cut(s) | 2029 |
| BmiI | GGNNCC | 2 cut(s) | 371, 792 |
| BmrFI | CCNGG | 1 cut(s) | 1881 |
| BmsI | GCATC | 4 cut(s) | 37, 61, 85, 754 |
| BpiI | GAAGAC | 2 cut(s) | 269, 615 |
| BpmI | CTGGAG | 2 cut(s) | 210, 240 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1142 |
| Bpu14I | TTCGAA | 3 cut(s) | 153, 174, 1317 |
| BpuEI | CTTGAG | 2 cut(s) | 533, 692 |
| Bsa29I | ATCGAT | 1 cut(s) | 318 |
| BsaAI | YACGTR | 3 cut(s) | 439, 851, 1474 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1623 |
| BsaJI | CCNNGG | 7 cut(s) | 365, 1444, 1540, 1610, 1807, 1879, 1988 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 208, 238, 1167, 1197, 1969, 1999 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1990 |
| Bse1I | ACTGG | 3 cut(s) | 223, 619, 689 |
| Bse3DI | GCAATG | 2 cut(s) | 286, 1742 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1623 |
| BseBI | CCWGG | 1 cut(s) | 1881 |
| BseCI | ATCGAT | 1 cut(s) | 318 |
| BseDI | CCNNGG | 7 cut(s) | 365, 1444, 1540, 1610, 1807, 1879, 1988 |
| BseGI | GGATG | 3 cut(s) | 178, 523, 1624 |
| BseJI | GATNNNNATC | 1 cut(s) | 1623 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1990 |
| BseMI | GCAATG | 2 cut(s) | 286, 1742 |
| BseMII | CTCAG | 4 cut(s) | 1156, 1280, 1308, 1961 |
| BseNI | ACTGG | 3 cut(s) | 223, 619, 689 |
| BseSI | GKGCMC | 1 cut(s) | 346 |
| BseXI | GCAGC | 2 cut(s) | 478, 1245 |
| Bsh1236I | CGCG | 1 cut(s) | 882 |
| BshNI | GGYRCC | 1 cut(s) | 369 |
| BshVI | ATCGAT | 1 cut(s) | 318 |
| BsiHKAI | GWGCWC | 5 cut(s) | 226, 571, 841, 1044, 1295 |
| BslFI | GGGAC | 1 cut(s) | 787 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1990 |
| BsmAI | GTCTC | 2 cut(s) | 1700, 1945 |
| BsmFI | GGGAC | 1 cut(s) | 787 |
| BsmI | GAATGC | 1 cut(s) | 119 |
| Bsp119I | TTCGAA | 3 cut(s) | 153, 174, 1317 |
| Bsp1286I | GDGCHC | 7 cut(s) | 226, 346, 571, 793, 841, 1044, 1295 |
| Bsp19I | CCATGG | 3 cut(s) | 1444, 1807, 1988 |
| BspACI | CCGC | 8 cut(s) | 26, 108, 258, 603, 880, 1662, 1734, 1911 |
| BspCNI | CTCAG | 4 cut(s) | 1155, 1281, 1307, 1960 |
| BspDI | ATCGAT | 1 cut(s) | 318 |
| BspFNI | CGCG | 1 cut(s) | 882 |
| BspHI | TCATGA | 3 cut(s) | 52, 1120, 1134 |
| BspLI | GGNNCC | 2 cut(s) | 371, 792 |
| BspPI | GGATC | 2 cut(s) | 326, 578 |
| BspT104I | TTCGAA | 3 cut(s) | 153, 174, 1317 |
| BspT107I | GGYRCC | 1 cut(s) | 369 |
| BsrDI | GCAATG | 2 cut(s) | 286, 1742 |
| BsrI | ACTGG | 3 cut(s) | 223, 619, 689 |
| BssECI | CCNNGG | 7 cut(s) | 365, 1444, 1540, 1610, 1807, 1879, 1988 |
| BssNAI | GTATAC | 1 cut(s) | 1959 |
| BssT1I | CCWWGG | 5 cut(s) | 1444, 1540, 1610, 1807, 1988 |
| Bst1107I | GTATAC | 1 cut(s) | 1959 |
| Bst2UI | CCWGG | 1 cut(s) | 1881 |
| Bst4CI | ACNGT | 3 cut(s) | 127, 238, 1862 |
| Bst6I | CTCTTC | 3 cut(s) | 933, 1393, 1892 |
| BstBAI | YACGTR | 3 cut(s) | 439, 851, 1474 |
| BstBI | TTCGAA | 3 cut(s) | 153, 174, 1317 |
| BstC8I | GCNNGC | 2 cut(s) | 76, 1660 |
| BstDEI | CTNAG | 5 cut(s) | 1142, 1269, 1289, 1294, 1947 |
| BstDSI | CCRYGG | 4 cut(s) | 365, 1444, 1807, 1988 |
| BstF5I | GGATG | 3 cut(s) | 178, 523, 1624 |
| BstFNI | CGCG | 1 cut(s) | 882 |
| BstHHI | GCGC | 2 cut(s) | 491, 671 |
| BstMAI | GTCTC | 2 cut(s) | 1700, 1945 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 114, 1320, 1512 |
| BstNI | CCWGG | 1 cut(s) | 1881 |
| BstNSI | RCATGY | 2 cut(s) | 1182, 1983 |
| BstSCI | CCNGG | 1 cut(s) | 1879 |
| BstSLI | GKGCMC | 1 cut(s) | 346 |
| BstSNI | TACGTA | 1 cut(s) | 1474 |
| BstUI | CGCG | 1 cut(s) | 882 |
| BstV1I | GCAGC | 2 cut(s) | 478, 1245 |
| BstV2I | GAAGAC | 2 cut(s) | 269, 615 |
| BstX2I | RGATCY | 1 cut(s) | 1838 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 443, 1710 |
| BstYI | RGATCY | 1 cut(s) | 1838 |
| BstZ17I | GTATAC | 1 cut(s) | 1959 |
| Bsu15I | ATCGAT | 1 cut(s) | 318 |
| BsuI | GTATCC | 2 cut(s) | 46, 906 |
| BsuTUI | ATCGAT | 1 cut(s) | 318 |
| BtgI | CCRYGG | 4 cut(s) | 365, 1444, 1807, 1988 |
| BtgZI | GCGATG | 2 cut(s) | 432, 934 |
| BtrI | CACGTC | 1 cut(s) | 2029 |
| BtsCI | GGATG | 3 cut(s) | 178, 523, 1624 |
| BtsIMutI | CAGTG | 2 cut(s) | 579, 612 |
| Cac8I | GCNNGC | 2 cut(s) | 76, 1660 |
| CciI | TCATGA | 3 cut(s) | 52, 1120, 1134 |
| CfoI | GCGC | 2 cut(s) | 491, 671 |
| ClaI | ATCGAT | 1 cut(s) | 318 |
| CseI | GACGC | 1 cut(s) | 263 |
| Csp6I | GTAC | 6 cut(s) | 141, 239, 713, 1052, 1615, 1760 |
| CviQI | GTAC | 6 cut(s) | 141, 239, 713, 1052, 1615, 1760 |
| DdeI | CTNAG | 5 cut(s) | 1142, 1269, 1289, 1294, 1947 |
| DraIII | CACNNNGTG | 1 cut(s) | 1007 |
| Eam1104I | CTCTTC | 3 cut(s) | 933, 1393, 1892 |
| EarI | CTCTTC | 3 cut(s) | 933, 1393, 1892 |
| Ecl136II | GAGCTC | 3 cut(s) | 224, 1042, 1293 |
| Eco105I | TACGTA | 1 cut(s) | 1474 |
| Eco130I | CCWWGG | 5 cut(s) | 1444, 1540, 1610, 1807, 1988 |
| Eco24I | GRGCYC | 4 cut(s) | 226, 793, 1044, 1295 |
| Eco32I | GATATC | 4 cut(s) | 316, 640, 1072, 1771 |
| Eco53kI | GAGCTC | 3 cut(s) | 224, 1042, 1293 |
| Eco57I | CTGAAG | 1 cut(s) | 1077 |
| Eco72I | CACGTG | 1 cut(s) | 851 |
| EcoICRI | GAGCTC | 3 cut(s) | 224, 1042, 1293 |
| EcoRII | CCWGG | 1 cut(s) | 1879 |
| EcoRV | GATATC | 4 cut(s) | 316, 640, 1072, 1771 |
| EcoT14I | CCWWGG | 5 cut(s) | 1444, 1540, 1610, 1807, 1988 |
| EcoT38I | GRGCYC | 4 cut(s) | 226, 793, 1044, 1295 |
| ErhI | CCWWGG | 5 cut(s) | 1444, 1540, 1610, 1807, 1988 |
| FaqI | GGGAC | 1 cut(s) | 787 |
| FauI | CCCGC | 2 cut(s) | 33, 1904 |
| FbaI | TGATCA | 1 cut(s) | 1621 |
| FblI | GTMKAC | 2 cut(s) | 1958, 2042 |
| Fnu4HI | GCNGC | 3 cut(s) | 492, 1234, 1663 |
| FokI | GGATG | 3 cut(s) | 165, 510, 1611 |
| FriOI | GRGCYC | 4 cut(s) | 226, 793, 1044, 1295 |
| Fsp4HI | GCNGC | 3 cut(s) | 492, 1234, 1663 |
| FspBI | CTAG | 2 cut(s) | 497, 1541 |
| FspI | TGCGCA | 1 cut(s) | 670 |
| GlaI | GCGC | 2 cut(s) | 490, 670 |
| GluI | GCNGC | 3 cut(s) | 492, 1234, 1663 |
| GsuI | CTGGAG | 2 cut(s) | 210, 240 |
| HgaI | GACGC | 1 cut(s) | 263 |
| HhaI | GCGC | 2 cut(s) | 491, 671 |
| Hin6I | GCGC | 2 cut(s) | 489, 669 |
| HinP1I | GCGC | 2 cut(s) | 489, 669 |
| HindIII | AAGCTT | 1 cut(s) | 551 |
| HinfI | GANTC | 3 cut(s) | 49, 506, 1377 |
| HphI | GGTGA | 8 cut(s) | 104, 122, 501, 550, 794, 860, 1658, 1823 |
| Hpy166II | GTNNAC | 8 cut(s) | 123, 302, 826, 1402, 1760, 1814, 1959, 2043 |
| Hpy188I | TCNGA | 5 cut(s) | 357, 1290, 1297, 1775, 1802 |
| Hpy188III | TCNNGA | 8 cut(s) | 10, 53, 227, 1084, 1121, 1135, 1454, 1703 |
| Hpy8I | GTNNAC | 8 cut(s) | 123, 302, 826, 1402, 1760, 1814, 1959, 2043 |
| Hpy99I | CGWCG | 1 cut(s) | 1334 |
| HpyAV | CCTTC | 5 cut(s) | 192, 557, 763, 1367, 1481 |
| HpyCH4III | ACNGT | 3 cut(s) | 127, 238, 1862 |
| HpyCH4IV | ACGT | 8 cut(s) | 143, 438, 850, 861, 1023, 1473, 1525, 2028 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 114, 1320, 1512 |
| HpyF3I | CTNAG | 5 cut(s) | 1142, 1269, 1289, 1294, 1947 |
| HpySE526I | ACGT | 8 cut(s) | 143, 438, 850, 861, 1023, 1473, 1525, 2028 |
| HspAI | GCGC | 2 cut(s) | 489, 669 |
| Ksp22I | TGATCA | 1 cut(s) | 1621 |
| LmnI | GCTCC | 5 cut(s) | 221, 229, 566, 796, 1175 |
| Lsp1109I | GCAGC | 2 cut(s) | 478, 1245 |
| LweI | GCATC | 4 cut(s) | 37, 61, 85, 754 |
| MaeI | CTAG | 2 cut(s) | 497, 1541 |
| MaeII | ACGT | 8 cut(s) | 143, 438, 850, 861, 1023, 1473, 1525, 2028 |
| MaeIII | GTNAC | 5 cut(s) | 530, 1451, 1490, 1724, 1738 |
| MflI | RGATCY | 1 cut(s) | 1838 |
| MhlI | GDGCHC | 7 cut(s) | 226, 346, 571, 793, 841, 1044, 1295 |
| MluCI | AATT | 9 cut(s) | 394, 501, 620, 652, 1228, 1558, 1820, 2009, 2032 |
| MlyI | GAGTC | 1 cut(s) | 500 |
| MseI | TTAA | 5 cut(s) | 45, 204, 858, 1412, 1595 |
| MslI | CAYNNNNRTG | 3 cut(s) | 441, 810, 1809 |
| MspR9I | CCNGG | 1 cut(s) | 1881 |
| Mva1269I | GAATGC | 1 cut(s) | 119 |
| MvaI | CCWGG | 1 cut(s) | 1881 |
| MvnI | CGCG | 1 cut(s) | 882 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 114, 1320, 1512 |
| NcoI | CCATGG | 3 cut(s) | 1444, 1807, 1988 |
| NlaIV | GGNNCC | 2 cut(s) | 371, 792 |
| NmuCI | GTSAC | 3 cut(s) | 530, 1451, 1738 |
| NsbI | TGCGCA | 1 cut(s) | 670 |
| NspI | RCATGY | 2 cut(s) | 1182, 1983 |
| NspV | TTCGAA | 3 cut(s) | 153, 174, 1317 |
| OliI | CACNNNNGTG | 1 cut(s) | 1809 |
| PagI | TCATGA | 3 cut(s) | 52, 1120, 1134 |
| PctI | GAATGC | 1 cut(s) | 119 |
| PfeI | GAWTC | 2 cut(s) | 49, 1377 |
| PkrI | GCNGC | 3 cut(s) | 493, 1235, 1664 |
| PleI | GAGTC | 1 cut(s) | 500 |
| PmaCI | CACGTG | 1 cut(s) | 851 |
| PmlI | CACGTG | 1 cut(s) | 851 |
| PpsI | GAGTC | 1 cut(s) | 500 |
| Ppu21I | YACGTR | 3 cut(s) | 439, 851, 1474 |
| Psp124BI | GAGCTC | 3 cut(s) | 226, 1044, 1295 |
| Psp6I | CCWGG | 1 cut(s) | 1879 |
| PspCI | CACGTG | 1 cut(s) | 851 |
| PspGI | CCWGG | 1 cut(s) | 1879 |
| PspN4I | GGNNCC | 2 cut(s) | 371, 792 |
| PsuI | RGATCY | 1 cut(s) | 1838 |
| RsaI | GTAC | 6 cut(s) | 142, 240, 714, 1053, 1616, 1761 |
| RsaNI | GTAC | 6 cut(s) | 141, 239, 713, 1052, 1615, 1760 |
| RseI | CAYNNNNRTG | 3 cut(s) | 441, 810, 1809 |
| SacI | GAGCTC | 3 cut(s) | 226, 1044, 1295 |
| SaqAI | TTAA | 5 cut(s) | 45, 204, 858, 1412, 1595 |
| SatI | GCNGC | 3 cut(s) | 492, 1234, 1663 |
| SchI | GAGTC | 1 cut(s) | 500 |
| ScrFI | CCNGG | 1 cut(s) | 1881 |
| SduI | GDGCHC | 7 cut(s) | 226, 346, 571, 793, 841, 1044, 1295 |
| SfaNI | GCATC | 4 cut(s) | 37, 61, 85, 754 |
| SfuI | TTCGAA | 3 cut(s) | 153, 174, 1317 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 441, 810, 1809 |
| SmlI | CTYRAG | 2 cut(s) | 548, 707 |
| SmoI | CTYRAG | 2 cut(s) | 548, 707 |
| SnaBI | TACGTA | 1 cut(s) | 1474 |
| Sse9I | AATT | 9 cut(s) | 394, 501, 620, 652, 1228, 1558, 1820, 2009, 2032 |
| SsiI | CCGC | 8 cut(s) | 26, 108, 258, 603, 880, 1662, 1734, 1911 |
| SspI | AATATT | 2 cut(s) | 1264, 1670 |
| SspMI | CTAG | 2 cut(s) | 497, 1541 |
| SstI | GAGCTC | 3 cut(s) | 226, 1044, 1295 |
| StyD4I | CCNGG | 1 cut(s) | 1879 |
| StyI | CCWWGG | 5 cut(s) | 1444, 1540, 1610, 1807, 1988 |
| TaaI | ACNGT | 3 cut(s) | 127, 238, 1862 |
| TaiI | ACGT | 8 cut(s) | 146, 441, 853, 864, 1026, 1476, 1528, 2031 |
| TaqI | TCGA | 8 cut(s) | 153, 174, 318, 1044, 1074, 1317, 1329, 1424 |
| TasI | AATT | 9 cut(s) | 394, 501, 620, 652, 1228, 1558, 1820, 2009, 2032 |
| TatI | WGTACW | 1 cut(s) | 1759 |
| TauI | GCSGC | 1 cut(s) | 1665 |
| TfiI | GAWTC | 2 cut(s) | 49, 1377 |
| Tru1I | TTAA | 5 cut(s) | 45, 204, 858, 1412, 1595 |
| Tru9I | TTAA | 5 cut(s) | 45, 204, 858, 1412, 1595 |
| TscAI | CASTG | 2 cut(s) | 586, 619 |
| TseFI | GTSAC | 3 cut(s) | 530, 1451, 1738 |
| TseI | GCWGC | 2 cut(s) | 491, 1233 |
| Tsp45I | GTSAC | 3 cut(s) | 530, 1451, 1738 |
| TspGWI | ACGGA | 2 cut(s) | 1167, 1565 |
| TspRI | CASTG | 2 cut(s) | 586, 619 |
| XapI | RAATTY | 1 cut(s) | 620 |
| XceI | RCATGY | 2 cut(s) | 1182, 1983 |
| XmaJI | CCTAGG | 1 cut(s) | 1540 |
| XmiI | GTMKAC | 2 cut(s) | 1958, 2042 |
| XspI | CTAG | 2 cut(s) | 497, 1541 |