AT5G54050

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000226
Physical Location & Seq
Reverse (-)
21933601 .. 21936053
2453 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G54050.1

Sequence Viewer

Length: 1743 bp
ATGTCTTCTACTGATGTCGAAGTAGTCACCTTTCCGTTTCATGATCATCCTTTATCATGTTGTGATGATCCTGTTGCTGCTGAATTTTACTGCTCATTGTGCTCTCATTATCATTCCCTCAGTTGGCAAGTATTCAGGTCCGGCGTATGGCAGAATGAAGTGGAGCCATGGTTTAGGACATCTGAATACCACGGACCGGCCCTGCGAATATCCAATAACATCAACTATCATTGCAAGGAGTGCGACATTATGATGCACAAAGACTGCGTTGACCGCTTATTCAATCAGCCATTTATATGCAATCACATTCTCAAGATCTTTGTTAGCACTATCTCACCACTTGACAGTATAGTTGACGACCTTTGTCATTTTTGTCGATTTGAGGTTCATCATATGTTTCTTCGTTGCACGATATGCAACATAAGCCTGCATATAGGATGTGTGGCGGAGCCACCACCACTCACAATTTCTGAACCAAAACACCACAAGCATAGCCTCAGTCTCCTGCTAAGGCTAGTCACCTTTACTTGTAATGCTTGTGGTGTGGAAGGCGACCGCAATCCTTACGTATGTCTTGAATGCAATCTGATGGTCCACAAAGATTGTGTTGAGAATCTACCGCGAGTCATAAGCATAAATCGGCATGACCATCGCATATCTCATACTTTTCATCTTGGTGAAAAAGAAGGAGATTGGGAGTGTGGAGTTTGTCGAAAGATGATTAATTGGGTCTATGGAGGCTATAAATGCTCTCGTTGTCCTAGTTATGCCGTTCATTCAAAATGTGCAACAAAAAAAGAAGTGTGGGATGGGTTAGAGCTCGAAGATGTGCCCGAAGAAGAAGAAGAAATCAAAGATCCATTCAAGGTAATTAATGAAAAGGGAGATATTGTTCATTTTAGTCATGAAAAGCATATTCTCAGATTGGATGAGAATTATGTTACGGATGATGCTAACATGCGCTGTCGGTGTTGCATTCTTGCTATCAATGGTGATCCATGCTACAAATGCATGGAATGTGATTTCATCCTTCATAAAGCGTGTGCTAATCTTCCTCGGAAGAGGCGACATTTATTGCACAACCATAAACTCACTCTTTCATCTAGGCGTATTGATGAAGATAATTTTCTTGAGTGTAGTGCTTGTCGAATCTATACAGATGGTTTCATATACGAGTGTCTTCATGAAGATTGCGAAAATAAGAACGCCTATGATGTTCGATGTAGTTCGGTATCGGAACCGTTTCACCATGATTTACATCAACATCCCTTATATTTTACCTTGCAAAGTTCTAGACGATGTCAAGCTTGTAACAAAGAAATAAAAGATGATCCCTTAAATTGTACGGTCTGTGATGAATACTCTTTATGCATGAGGTGCGCTACTTTACCAAGAAAGGTAAAACACAGGTGTGATGATCATTTTCTGTCACTATGTCAAGGTGTGGGAAACGCAAGTGGTGACTTGTGGTGTGATATTTGTGAGACGAAGACAGATCCGAGCGTACGTTACTATACTTGTGATGAGTGTGGGCTAAGTCTCCATATTGATTGTGTACTTGGAGATTTATATTATATGAAGCTAGGACACCAAAACCCTGAGATGGAGATACATCCTAACAATGGTGCTACTCGACCTTCTTGCGCCCGTTGTGGATTTCGTTGCAAGTTCCCCTTCTTCGTTAGGGGTACAAAAGAACAATCTGCTCTTTATGTTTGTTCAATAGACTTATGCCCAAGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2

Protein Analysis

580

Amino Acids

67.07

Weight (kDa)

6.08

Isoelectric Point (pI)

59.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 160 - 203 3.4e-11 C1 domain
C1_2 PF03107 213 - 263 7.7e-10 C1 domain
C1_2 PF03107 300 - 349 1.2e-10 C1 domain
C1_2 PF03107 419 - 461 7.7e-06 C1 domain
C1_2 PF03107 470 - 519 3e-09 C1 domain
C1-like_CT PF22926 535 - 576 4e-10 C1 domain-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 622
AciI CCGC 4 cut(s) 274, 446, 556, 620
AclWI GGATC 5 cut(s) 62, 851, 989, 1325, 1490
AcsI RAATTY 1 cut(s) 83
AfaI GTAC 4 cut(s) 1345, 1506, 1557, 1690
AfiI CCNNNNNNNGG 5 cut(s) 123, 147, 196, 1603, 1622
AgsI TTSAA 5 cut(s) 283, 578, 780, 865, 1722
AleI CACNNNNGTG 1 cut(s) 1410
AloI GAACNNNNNNTCC 2 cut(s) 876, 908
AluBI AGCT 3 cut(s) 820, 1307, 1582
AluI AGCT 3 cut(s) 820, 1307, 1582
Alw21I GWGCWC 2 cut(s) 104, 822
Alw26I GTCTC 3 cut(s) 506, 1478, 1544
AlwI GGATC 5 cut(s) 62, 851, 989, 1325, 1490
AoxI GGCC 1 cut(s) 198
ApeKI GCWGC 1 cut(s) 77
ApoI RAATTY 1 cut(s) 83
AseI ATTAAT 2 cut(s) 723, 873
Asp700I GAANNNNTTC 1 cut(s) 1242
AspLEI GCGC 3 cut(s) 963, 1382, 1646
AspS9I GGNCC 4 cut(s) 138, 194, 199, 592
AsuHPI GGTGA 7 cut(s) 19, 327, 511, 689, 1004, 1238, 1472
AvaII GGWCC 3 cut(s) 138, 194, 592
BaeGI GKGCMC 1 cut(s) 834
BanII GRGCYC 1 cut(s) 822
BbsI GAAGAC 2 cut(s) 1172, 1496
Bbv12I GWGCWC 2 cut(s) 104, 822
BbvI GCAGC 1 cut(s) 64
BccI CCATC 5 cut(s) 583, 657, 803, 1154, 1597
BceAI ACGGC 1 cut(s) 755
BcgI CGANNNNNNTGC 4 cut(s) 632, 666, 1623, 1657
BclI TGATCA 2 cut(s) 43, 1417
BcoDI GTCTC 3 cut(s) 506, 1478, 1544
BfaI CTAG 5 cut(s) 515, 762, 1104, 1293, 1583
BglII AGATCT 1 cut(s) 315
BisI GCNGC 1 cut(s) 78
BlsI GCNGC 1 cut(s) 79
Bme18I GGWCC 3 cut(s) 138, 194, 592
BmgT120I GGNCC 4 cut(s) 138, 194, 199, 592
BmiI GGNNCC 3 cut(s) 165, 450, 1239
BmsI GCATC 2 cut(s) 243, 940
BoxI GACNNNNGTC 1 cut(s) 363
BpiI GAAGAC 2 cut(s) 1172, 1496
Bpu10I CCTNAGC 1 cut(s) 509
BpuEI CTTGAG 2 cut(s) 296, 1151
BsaAI YACGTR 1 cut(s) 568
BsaBI GATNNNNATC 1 cut(s) 1257
BsaJI CCNNGG 4 cut(s) 167, 190, 1055, 1736
BsaXI ACNNNNNCTCC 4 cut(s) 155, 185, 876, 906
Bsc4I CCNNNNNNNGG 5 cut(s) 123, 147, 196, 1603, 1622
Bse118I RCCGGY 1 cut(s) 196
Bse3DI GCAATG 1 cut(s) 229
Bse8I GATNNNNATC 1 cut(s) 1257
BseDI CCNNGG 4 cut(s) 167, 190, 1055, 1736
BseGI GGATG 8 cut(s) 46, 443, 814, 934, 952, 1026, 1264, 1612
BseJI GATNNNNATC 1 cut(s) 1257
BseLI CCNNNNNNNGG 5 cut(s) 123, 147, 196, 1603, 1622
BseMI GCAATG 1 cut(s) 229
BseMII CTCAG 4 cut(s) 133, 511, 934, 1590
BseSI GKGCMC 1 cut(s) 834
BseXI GCAGC 1 cut(s) 64
Bsh1236I CGCG 1 cut(s) 622
Bsh1285I CGRYCG 1 cut(s) 556
BshFI GGCC 1 cut(s) 200
BsiEI CGRYCG 1 cut(s) 556
BsiHKAI GWGCWC 2 cut(s) 104, 822
BsiSI CCGG 2 cut(s) 141, 197
BsiWI CGTACG 1 cut(s) 1504
BslI CCNNNNNNNGG 5 cut(s) 123, 147, 196, 1603, 1622
BsmAI GTCTC 3 cut(s) 506, 1478, 1544
BsmBI CGTCTC 1 cut(s) 1478
BsmI GAATGC 2 cut(s) 584, 975
BsnI GGCC 1 cut(s) 200
Bsp1286I GDGCHC 3 cut(s) 104, 822, 834
Bsp143I GATC 8 cut(s) 43, 67, 315, 856, 994, 1330, 1417, 1495
Bsp19I CCATGG 1 cut(s) 167
BspACI CCGC 4 cut(s) 274, 446, 556, 620
BspANI GGCC 1 cut(s) 200
BspCNI CTCAG 4 cut(s) 132, 510, 933, 1591
BspFNI CGCG 1 cut(s) 622
BspHI TCATGA 3 cut(s) 40, 904, 1183
BspLI GGNNCC 3 cut(s) 165, 450, 1239
BspPI GGATC 5 cut(s) 62, 851, 989, 1325, 1490
BsrDI GCAATG 1 cut(s) 229
BsrFI RCCGGY 1 cut(s) 196
BssAI RCCGGY 1 cut(s) 196
BssECI CCNNGG 4 cut(s) 167, 190, 1055, 1736
BssMI GATC 8 cut(s) 43, 67, 315, 856, 994, 1330, 1417, 1495
BssT1I CCWWGG 2 cut(s) 167, 1736
Bst4CI ACNGT 3 cut(s) 347, 1242, 1348
Bst6I CTCTTC 1 cut(s) 1055
BstAPI GCANNNNNTGC 3 cut(s) 240, 414, 1377
BstBAI YACGTR 1 cut(s) 568
BstC8I GCNNGC 1 cut(s) 428
BstDEI CTNAG 6 cut(s) 119, 497, 509, 920, 1535, 1599
BstDSI CCRYGG 2 cut(s) 167, 190
BstF5I GGATG 8 cut(s) 46, 443, 814, 934, 952, 1026, 1264, 1612
BstFNI CGCG 1 cut(s) 622
BstHHI GCGC 3 cut(s) 963, 1382, 1646
BstKTI GATC 8 cut(s) 46, 70, 318, 859, 997, 1333, 1420, 1498
BstMAI GTCTC 3 cut(s) 506, 1478, 1544
BstMBI GATC 8 cut(s) 43, 67, 315, 856, 994, 1330, 1417, 1495
BstMCI CGRYCG 1 cut(s) 556
BstMWI GCNNNNNNNGC 8 cut(s) 99, 240, 273, 414, 423, 747, 1008, 1377
BstNSI RCATGY 1 cut(s) 961
BstPAI GACNNNNGTC 1 cut(s) 363
BstSLI GKGCMC 1 cut(s) 834
BstSNI TACGTA 1 cut(s) 568
BstUI CGCG 1 cut(s) 622
BstV1I GCAGC 1 cut(s) 64
BstV2I GAAGAC 2 cut(s) 1172, 1496
BstX2I RGATCY 3 cut(s) 315, 856, 1495
BstYI RGATCY 3 cut(s) 315, 856, 1495
BsuRI GGCC 1 cut(s) 200
BtgI CCRYGG 2 cut(s) 167, 190
BtgZI GCGATG 1 cut(s) 635
BtsCI GGATG 8 cut(s) 46, 443, 814, 934, 952, 1026, 1264, 1612
Cac8I GCNNGC 1 cut(s) 428
CciI TCATGA 3 cut(s) 40, 904, 1183
CfoI GCGC 3 cut(s) 963, 1382, 1646
Cfr10I RCCGGY 1 cut(s) 196
Cfr13I GGNCC 4 cut(s) 138, 194, 199, 592
CpoI CGGWCCG 1 cut(s) 194
Csp6I GTAC 4 cut(s) 1344, 1505, 1556, 1689
CspCI CAANNNNNGTGG 2 cut(s) 584, 619
CspI CGGWCCG 1 cut(s) 194
CviQI GTAC 4 cut(s) 1344, 1505, 1556, 1689
DdeI CTNAG 6 cut(s) 119, 497, 509, 920, 1535, 1599
DpnI GATC 8 cut(s) 45, 69, 317, 858, 996, 1332, 1419, 1497
DpnII GATC 8 cut(s) 43, 67, 315, 856, 994, 1330, 1417, 1495
Eam1104I CTCTTC 1 cut(s) 1055
EarI CTCTTC 1 cut(s) 1055
EciI GGCGGA 1 cut(s) 461
Ecl136II GAGCTC 1 cut(s) 820
Eco105I TACGTA 1 cut(s) 568
Eco130I CCWWGG 2 cut(s) 167, 1736
Eco24I GRGCYC 1 cut(s) 822
Eco47I GGWCC 3 cut(s) 138, 194, 592
Eco53kI GAGCTC 1 cut(s) 820
EcoICRI GAGCTC 1 cut(s) 820
EcoT14I CCWWGG 2 cut(s) 167, 1736
EcoT22I ATGCAT 2 cut(s) 1013, 1373
EcoT38I GRGCYC 1 cut(s) 822
ErhI CCWWGG 2 cut(s) 167, 1736
Esp3I CGTCTC 1 cut(s) 1478
FalI AAGNNNNNCTT 2 cut(s) 1658, 1690
FauNDI CATATG 1 cut(s) 393
FbaI TGATCA 2 cut(s) 43, 1417
Fnu4HI GCNGC 1 cut(s) 78
FokI GGATG 8 cut(s) 33, 450, 821, 941, 959, 1013, 1251, 1599
FriOI GRGCYC 1 cut(s) 822
Fsp4HI GCNGC 1 cut(s) 78
FspBI CTAG 5 cut(s) 515, 762, 1104, 1293, 1583
GlaI GCGC 3 cut(s) 962, 1381, 1645
GluI GCNGC 1 cut(s) 78
HaeIII GGCC 1 cut(s) 200
HapII CCGG 2 cut(s) 141, 197
HhaI GCGC 3 cut(s) 963, 1382, 1646
Hin6I GCGC 3 cut(s) 961, 1380, 1644
HinP1I GCGC 3 cut(s) 961, 1380, 1644
HincII GTYRAC 2 cut(s) 271, 355
HindII GTYRAC 2 cut(s) 271, 355
HindIII AAGCTT 1 cut(s) 1305
HinfI GANTC 3 cut(s) 613, 624, 1149
HpaII CCGG 2 cut(s) 141, 197
HphI GGTGA 7 cut(s) 19, 327, 511, 689, 1004, 1238, 1472
Hpy166II GTNNAC 4 cut(s) 271, 355, 595, 1556
Hpy188I TCNGA 7 cut(s) 184, 472, 588, 923, 1059, 1237, 1500
Hpy188III TCNNGA 7 cut(s) 41, 313, 575, 905, 1130, 1184, 1293
Hpy8I GTNNAC 4 cut(s) 271, 355, 595, 1556
HpyAV CCTTC 5 cut(s) 542, 680, 1040, 1647, 1684
HpyCH4III ACNGT 3 cut(s) 347, 1242, 1348
HpyCH4IV ACGT 2 cut(s) 567, 1507
HpyF10VI GCNNNNNNNGC 8 cut(s) 99, 240, 273, 414, 423, 747, 1008, 1377
HpyF3I CTNAG 6 cut(s) 119, 497, 509, 920, 1535, 1599
HpySE526I ACGT 2 cut(s) 567, 1507
HspAI GCGC 3 cut(s) 961, 1380, 1644
Ksp22I TGATCA 2 cut(s) 43, 1417
Kzo9I GATC 8 cut(s) 43, 67, 315, 856, 994, 1330, 1417, 1495
LmnI GCTCC 2 cut(s) 163, 448
LpnPI CCDG 9 cut(s) 84, 121, 154, 210, 215, 440, 518, 1393, 1611
Lsp1109I GCAGC 1 cut(s) 64
LweI GCATC 2 cut(s) 243, 940
MaeI CTAG 5 cut(s) 515, 762, 1104, 1293, 1583
MaeII ACGT 2 cut(s) 567, 1507
MaeIII GTNAC 7 cut(s) 25, 517, 940, 1310, 1428, 1460, 1508
MalI GATC 8 cut(s) 45, 69, 317, 858, 996, 1332, 1419, 1497
MboI GATC 8 cut(s) 43, 67, 315, 856, 994, 1330, 1417, 1495
MflI RGATCY 3 cut(s) 315, 856, 1495
MhlI GDGCHC 3 cut(s) 104, 822, 834
MluCI AATT 7 cut(s) 83, 465, 724, 870, 934, 1123, 1339
MlyI GAGTC 1 cut(s) 633
MnlI CCTC 7 cut(s) 128, 376, 506, 731, 1056, 1065, 1368
Mph1103I ATGCAT 2 cut(s) 1013, 1373
MroXI GAANNNNTTC 1 cut(s) 1242
MseI TTAA 3 cut(s) 723, 873, 1337
MslI CAYNNNNRTG 4 cut(s) 251, 295, 675, 1410
MspI CCGG 2 cut(s) 141, 197
Mva1269I GAATGC 2 cut(s) 584, 975
MvnI CGCG 1 cut(s) 622
MwoI GCNNNNNNNGC 8 cut(s) 99, 240, 273, 414, 423, 747, 1008, 1377
NcoI CCATGG 1 cut(s) 167
NdeI CATATG 1 cut(s) 393
NdeII GATC 8 cut(s) 43, 67, 315, 856, 994, 1330, 1417, 1495
NlaIV GGNNCC 3 cut(s) 165, 450, 1239
NmuCI GTSAC 4 cut(s) 25, 517, 1428, 1460
NsiI ATGCAT 2 cut(s) 1013, 1373
NspI RCATGY 1 cut(s) 961
OliI CACNNNNGTG 1 cut(s) 1410
PagI TCATGA 3 cut(s) 40, 904, 1183
PcsI WCGNNNNNNNCGW 1 cut(s) 1063
PctI GAATGC 2 cut(s) 584, 975
PdmI GAANNNNTTC 1 cut(s) 1242
PfeI GAWTC 2 cut(s) 613, 1149
Pfl23II CGTACG 1 cut(s) 1504
PflFI GACNNNGTC 1 cut(s) 1299
PkrI GCNGC 1 cut(s) 79
PleI GAGTC 1 cut(s) 632
PpsI GAGTC 1 cut(s) 632
Ppu21I YACGTR 1 cut(s) 568
PshAI GACNNNNGTC 1 cut(s) 363
PshBI ATTAAT 2 cut(s) 723, 873
Psp124BI GAGCTC 1 cut(s) 822
PspLI CGTACG 1 cut(s) 1504
PspN4I GGNNCC 3 cut(s) 165, 450, 1239
PspPI GGNCC 4 cut(s) 138, 194, 199, 592
PsuI RGATCY 3 cut(s) 315, 856, 1495
PsyI GACNNNGTC 1 cut(s) 1299
RsaI GTAC 4 cut(s) 1345, 1506, 1557, 1690
RsaNI GTAC 4 cut(s) 1344, 1505, 1556, 1689
RseI CAYNNNNRTG 4 cut(s) 251, 295, 675, 1410
Rsr2I CGGWCCG 1 cut(s) 194
RsrII CGGWCCG 1 cut(s) 194
SacI GAGCTC 1 cut(s) 822
SaqAI TTAA 3 cut(s) 723, 873, 1337
SatI GCNGC 1 cut(s) 78
Sau3AI GATC 8 cut(s) 43, 67, 315, 856, 994, 1330, 1417, 1495
Sau96I GGNCC 4 cut(s) 138, 194, 199, 592
SchI GAGTC 1 cut(s) 633
SduI GDGCHC 3 cut(s) 104, 822, 834
SfaNI GCATC 2 cut(s) 243, 940
SinI GGWCC 3 cut(s) 138, 194, 592
SmiMI CAYNNNNRTG 4 cut(s) 251, 295, 675, 1410
SmlI CTYRAG 2 cut(s) 311, 1130
SmoI CTYRAG 2 cut(s) 311, 1130
SnaBI TACGTA 1 cut(s) 568
Sse9I AATT 7 cut(s) 83, 465, 724, 870, 934, 1123, 1339
SsiI CCGC 4 cut(s) 274, 446, 556, 620
SspMI CTAG 5 cut(s) 515, 762, 1104, 1293, 1583
SstI GAGCTC 1 cut(s) 822
StyI CCWWGG 2 cut(s) 167, 1736
TaaI ACNGT 3 cut(s) 347, 1242, 1348
TaiI ACGT 2 cut(s) 570, 1510
TaqI TCGA 7 cut(s) 18, 376, 712, 822, 1147, 1219, 1633
TasI AATT 7 cut(s) 83, 465, 724, 870, 934, 1123, 1339
TatI WGTACW 1 cut(s) 1555
TfiI GAWTC 2 cut(s) 613, 1149
Tru1I TTAA 3 cut(s) 723, 873, 1337
Tru9I TTAA 3 cut(s) 723, 873, 1337
TseFI GTSAC 4 cut(s) 25, 517, 1428, 1460
TseI GCWGC 1 cut(s) 77
Tsp45I GTSAC 4 cut(s) 25, 517, 1428, 1460
TspGWI ACGGA 3 cut(s) 24, 207, 959
Tth111I GACNNNGTC 1 cut(s) 1299
VpaK11BI GGWCC 3 cut(s) 138, 194, 592
VspI ATTAAT 2 cut(s) 723, 873
XapI RAATTY 1 cut(s) 83
XbaI TCTAGA 1 cut(s) 1292
XceI RCATGY 1 cut(s) 961
XmnI GAANNNNTTC 1 cut(s) 1242
XspI CTAG 5 cut(s) 515, 762, 1104, 1293, 1583
Zsp2I ATGCAT 2 cut(s) 1013, 1373
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.