AT4G02180

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000226
Physical Location & Seq
Forward (+)
959964 .. 963678
3715 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G02180.1

Sequence Viewer

Length: 2970 bp
ATGGGTCTTATCAACCAATGGTTTCCACTGGACACTCTTGCAACTCCAGAGCGTATCAGGATGGCTTGTTTCGACGAGTTTACTTCTCCTTTTTATATGACCATGGATTCTGAGGGAGTGTTAATGCCGTTGGTCCATGAACATCTTATGATGCCTTGGAATGATCTAAGGAAAGGTGATTGTTGTGGACTCTCGAAAGCTGTCAGTGTTGGTTATTATTGCAAAAGCTGCGATTTTTTCGCCCACAAGAAATGTGGCGAGTCCTCCGAGTTTATCCAACATCCATCTCACCCCAATCACACTCTTCAGCTTCGAAGTAGCGAAGGCTGTAATAGCTGCAATTTATGTGGAAGGACCATTAGTGACCTATTCTATCGTTGTGATCTCTGTGATTTCGACGTGGATCTATATTGTGCCAAGTATCCACCACCAGAGGTTATTGACATTCCTGAGACGCATCACCACAAGCTCAACCTTCACAAGGAGTTGATCGAGTTCAACTGTGATGCTAAATGTGGGAAGATTACTGGTGCTGAGTTTCCTTACGTATGTTATGAATGTCAATTACCTTTCCATGTGGATTGCGTATGGCGGCCATCGGAGTTAAAACACCCATCAGAGGTAAACCATTCTTACCACTCCTTACACCCTCTTAAGCTCCTCTCAGGTCAATTACCGGATAATTGTGATGGAAAATGTCGTCTTTGCGCAAGAAAGATTGATGATAGATTGTTCTATCATTGTTCTCCGTGCAACTTCACCTTGGATCTACGTTGTGTTTTAAACCCACCACAACAATCTCTTCTGAATTTGAAAGCTCATGATCATCAACTCACCCTTCTCCCAAGACTCTTGTCATTTACATGTAATGCTTGCGGGTTGAATGGAGATCGAAGCCCTTACACTTGTGTTCAATGTGATTTCATGATTCATCAAGATTGTCTTGACTTACCACGCGTCATAAACATTAATCAGCATGATCACCGTGTTTCTCGAACTTCTGTTCCTGGTGTTGGAAATTCTAAGGGAGTGTTACTACCGTGGTTTCACAGGAAGCATATAATGATGCCTTGGAATGATATGAGGAAAGGAGATTGTTGTGGAAGTTTGGAATCTGTCACTGACGGCTTCTATTGCAAAAGCTGCGATATTTTCATCCACAAGAAATGTGGCGAGTCCTCCGGAATTATCGACCACTCATCTCACCCCGATCACACTCTTGAGCTTAACCGTTATCCTAATAAAAGTTGCAATTTATGTGGAAGGTCCAAAGGTGTGAATGTATGCTATCGTTGTGATCACTGTTACTACCAATTGGATCTATATTGTGCCAAGTACCCACCACCAGAGTTTATTGACATTCCCGAAACGCATCACCACAAGCTCACCCTTCTCAAGGAGCGGATTGAGTTTGATTGTGATGCTAAATGTGGGGAGACTGGAGATGGGTTTGCTTACAAATGTCCTGAATGTGATTTATTCTTCCATGTGGATTGCGTATGGCATCCGCCAGAAGTAAATCACCCTTTAGAGGTAAACCACTCTTACCACCCCTGGCACCCTCTTAAGCTCCACACAGGTCAACCACCACACTATTCTGATGGAACATGTCGTCTTTGTGCAAGAAATATTGATGATAGATTGTTTTATCATTGCTCTCCGTGCAACTTCACATTGGATCTGCGTTGTGTTTTAAATCCACCGCCACAATCTCTTTTGAATTTGAAAGCTCATGACCACCAACTCATCCTTCTCCCAAGACTCCGTTCTTTTACATGTAACGCTTGCGGGTTGAGTGGTGATCGAAGCCCTTACATATGTATTCAATGTGACTTTATGATCCATCAAGATTGTCTTGACCTTCCACGCCTCATAAACGTTAATCGTCATGATCACCGAGTTTCACGAACTTCTGTTCTTGGTGTTGTAAATTCTGTATGTGGAGTTTGTCATCAGAAGGTGGATTGGACTTGTGGAGGTTTTTCTTGTCAGAGGTGTTCTAGCTATGTTGTTCATTCGAAATGTGCTACCAGAAGAGATGTATGGAACGGGAAAGAACTGGAAGGAGTACCTGAAGAAATAGAAGATATAGAGCCATATGTGGTAATAGATGACAATACAATACAACATTTCAGCCACAAAGAGCATTACCTAAGACTCCACGTTAATGATGTTCTATGTAACGACAACAAGCGGTGCAAGGCATGCACCCATCCCATCTTTCTTCAATCCTTCTACAGTTGTATGGATTGTGACTTCCTTCTCCACCAAAATTGCGCTGGATTTCCTAGAATGAAAAGGCATGTGCTACACAATGAGCGTCTTACTTTAGTTACTAACGAGACTAAACTCTTTCAGTGTGCTCCTTGTGATAGATGGTCCAATGGTTTCAGGTACCAACATGGATATAAGTCACTCGATCTTCAGTGTGGTTCAATATCCGAGCCATTTGTCCATCCAAGCCATCCCGATCATCCCTTATATCACACTTTACTGGATGGAAGGAATGAGATTTGTGATGGCTGCAAAAAGAGTTGGTATTATGTGCTAAGTTGCATTGAAGATGATTGTAGATTTGTCTTATGTTTCAAATGCCTCACTTTACCACAAGTGGTAAAGCATAGAGTTGACGATGATCCTCTCTTGTTATGCTATGGCGAAAAGGCTTGTGGTAAATACTGGTGTGATATTTGTGAAAAGGAAACCAATCCAGAGACATGGTTCTACACGTGTAAAGATCATCAATCTAGTATGCATACAATGTGTGTGCTTGGTGACTCTGTAGGGATCATGCCAAAAAGCACAATAATGGGTTGGTACAAATATTATGAGGTGGTGCTCAATAATAGTATATCTCGTCCAGTTTGCGAGATGTGCAAGTCGCGTTGCATTTTTCCTACGATCATGAAGATTCTTGAAGCCTCAAATGAATACGTTTGCTCTTTAGCATGCGTCCTAGAGAGGGGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2

Protein Analysis

989

Amino Acids

113.84

Weight (kDa)

6.39

Isoelectric Point (pI)

50.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 95 - 139 5.9e-10 C1 domain
C1_2 PF03107 212 - 260 2.5e-10 C1 domain
C1_2 PF03107 273 - 314 8.6e-13 C1 domain
C1_2 PF03107 401 - 444 4.4e-07 C1 domain
C1_2 PF03107 457 - 500 4.2e-08 C1 domain
C1_2 PF03107 516 - 564 3.8e-12 C1 domain
C1_2 PF03107 577 - 618 1.2e-12 C1 domain
C1_2 PF03107 628 - 676 7.3e-07 C1 domain
C1_2 PF03107 711 - 760 3.1e-10 C1 domain
C1_2 PF03107 879 - 923 4e-06 C1 domain
C1-like_CT PF22926 943 - 985 1.8e-16 C1 domain-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 709
Acc65I GGTACC 1 cut(s) 2394
AccB1I GGYRCC 2 cut(s) 1557, 2394
AccBSI CCGCTC 1 cut(s) 1402
AccII CGCG 2 cut(s) 957, 2884
AccIII TCCGGA 1 cut(s) 1181
AciI CCGC 7 cut(s) 592, 876, 1402, 1508, 1703, 1788, 2194
AclI AACGTT 1 cut(s) 1878
AclWI GGATC 7 cut(s) 411, 774, 1326, 1686, 1834, 2630, 2795
AcoI YGGCCR 1 cut(s) 593
AcsI RAATTY 4 cut(s) 808, 1018, 1720, 1930
AcuI CTGAAG 3 cut(s) 290, 2094, 2408
AcvI CACGTG 1 cut(s) 2730
AfaI GTAC 4 cut(s) 1337, 2070, 2396, 2819
AfiI CCNNNNNNNGG 6 cut(s) 481, 619, 1013, 1396, 1531, 2962
AflII CTTAAG 2 cut(s) 653, 1565
AflIII ACRYGT 6 cut(s) 863, 955, 1607, 1775, 2727, 2729
AjiI CACGTC 1 cut(s) 400
AjnI CCWGG 2 cut(s) 1006, 1553
AjuI GAANNNNNNNTTGG 4 cut(s) 1734, 1750, 1766, 1782
AloI GAACNNNNNNTCC 2 cut(s) 988, 1020
Alw21I GWGCWC 2 cut(s) 2365, 2841
Alw26I GTCTC 4 cut(s) 446, 1430, 2336, 2708
AlwI GGATC 7 cut(s) 411, 774, 1326, 1686, 1834, 2630, 2795
Aor13HI TCCGGA 1 cut(s) 1181
AoxI GGCC 1 cut(s) 593
ApeKI GCWGC 4 cut(s) 228, 336, 1143, 2523
ApoI RAATTY 4 cut(s) 808, 1018, 1720, 1930
AseI ATTAAT 1 cut(s) 969
Asp718I GGTACC 1 cut(s) 2394
AspLEI GCGC 2 cut(s) 710, 2279
AspS9I GGNCC 4 cut(s) 133, 354, 1266, 2379
AsuII TTCGAA 2 cut(s) 313, 2018
AvaII GGWCC 4 cut(s) 133, 354, 1266, 2379
BanI GGYRCC 2 cut(s) 1557, 2394
BbrPI CACGTG 1 cut(s) 2730
Bbv12I GWGCWC 2 cut(s) 2365, 2841
BbvI GCAGC 4 cut(s) 215, 323, 1130, 2510
BceAI ACGGC 2 cut(s) 112, 1141
BciT130I CCWGG 2 cut(s) 1008, 1555
BciVI GTATCC 1 cut(s) 432
BclI TGATCA 4 cut(s) 823, 979, 1297, 1891
BcoDI GTCTC 4 cut(s) 446, 1430, 2336, 2708
BfaI CTAG 4 cut(s) 2001, 2289, 2748, 2957
BfmI CTRYAG 2 cut(s) 2236, 2781
BfrI CTTAAG 2 cut(s) 653, 1565
BfuI GTATCC 1 cut(s) 432
BisI GCNGC 5 cut(s) 229, 337, 593, 1144, 2524
BlsI GCNGC 5 cut(s) 230, 338, 594, 1145, 2525
Bme1390I CCNGG 2 cut(s) 1008, 1555
Bme18I GGWCC 4 cut(s) 133, 354, 1266, 2379
BmgBI CACGTC 1 cut(s) 400
BmgT120I GGNCC 4 cut(s) 133, 354, 1266, 2379
BmiI GGNNCC 2 cut(s) 1559, 2396
BmrFI CCNGG 2 cut(s) 1008, 1555
BmsI GCATC 7 cut(s) 141, 466, 496, 1056, 1381, 1411, 1513
BoxI GACNNNNGTC 1 cut(s) 853
BpmI CTGGAG 2 cut(s) 30, 1461
Bpu14I TTCGAA 2 cut(s) 313, 2018
BpuEI CTTGAG 2 cut(s) 1241, 1379
BsaAI YACGTR 2 cut(s) 547, 2730
BsaJI CCNNGG 6 cut(s) 102, 155, 762, 1040, 1070, 1553
BsaWI WCCGGW 2 cut(s) 676, 1181
Bsc4I CCNNNNNNNGG 6 cut(s) 481, 619, 1013, 1396, 1531, 2962
Bse1I ACTGG 7 cut(s) 33, 532, 1444, 2064, 2499, 2684, 2861
Bse3DI GCAATG 1 cut(s) 1651
BseAI TCCGGA 1 cut(s) 1181
BseBI CCWGG 2 cut(s) 1008, 1555
BseDI CCNNGG 6 cut(s) 102, 155, 762, 1040, 1070, 1553
BseLI CCNNNNNNNGG 6 cut(s) 481, 619, 1013, 1396, 1531, 2962
BseMI GCAATG 1 cut(s) 1651
BseMII CTCAG 4 cut(s) 102, 441, 525, 678
BseNI ACTGG 7 cut(s) 33, 532, 1444, 2064, 2499, 2684, 2861
BseRI GAGGAG 1 cut(s) 650
BseXI GCAGC 4 cut(s) 215, 323, 1130, 2510
Bsh1236I CGCG 2 cut(s) 957, 2884
BshFI GGCC 1 cut(s) 595
BshNI GGYRCC 2 cut(s) 1557, 2394
BsiHKAI GWGCWC 2 cut(s) 2365, 2841
BsiSI CCGG 2 cut(s) 677, 1182
BslI CCNNNNNNNGG 6 cut(s) 481, 619, 1013, 1396, 1531, 2962
BsmAI GTCTC 4 cut(s) 446, 1430, 2336, 2708
BsmBI CGTCTC 1 cut(s) 446
BsnI GGCC 1 cut(s) 595
Bsp119I TTCGAA 2 cut(s) 313, 2018
Bsp1286I GDGCHC 2 cut(s) 2365, 2841
Bsp13I TCCGGA 1 cut(s) 1181
Bsp19I CCATGG 1 cut(s) 102
BspACI CCGC 7 cut(s) 592, 876, 1402, 1508, 1703, 1788, 2194
BspANI GGCC 1 cut(s) 595
BspCNI CTCAG 4 cut(s) 103, 442, 526, 677
BspEI TCCGGA 1 cut(s) 1181
BspFNI CGCG 2 cut(s) 957, 2884
BspHI TCATGA 5 cut(s) 820, 924, 1732, 1888, 2904
BspLI GGNNCC 2 cut(s) 1559, 2396
BspPI GGATC 7 cut(s) 411, 774, 1326, 1686, 1834, 2630, 2795
BspT104I TTCGAA 2 cut(s) 313, 2018
BspT107I GGYRCC 2 cut(s) 1557, 2394
BspTI CTTAAG 2 cut(s) 653, 1565
BsrBI CCGCTC 1 cut(s) 1402
BsrDI GCAATG 1 cut(s) 1651
BsrI ACTGG 7 cut(s) 33, 532, 1444, 2064, 2499, 2684, 2861
BssECI CCNNGG 6 cut(s) 102, 155, 762, 1040, 1070, 1553
BssT1I CCWWGG 4 cut(s) 102, 155, 762, 1070
Bst2UI CCWGG 2 cut(s) 1008, 1555
Bst4CI ACNGT 6 cut(s) 503, 986, 1041, 1232, 1304, 2240
Bst6I CTCTTC 3 cut(s) 309, 807, 2029
BstAFI CTTAAG 2 cut(s) 653, 1565
BstAPI GCANNNNNTGC 3 cut(s) 228, 1143, 2205
BstBAI YACGTR 2 cut(s) 547, 2730
BstBI TTCGAA 2 cut(s) 313, 2018
BstC8I GCNNGC 4 cut(s) 874, 1786, 2206, 2950
BstDEI CTNAG 8 cut(s) 111, 167, 450, 534, 664, 1023, 2153, 2549
BstDSI CCRYGG 2 cut(s) 102, 1040
BstENI CCTNNNNNAGG 2 cut(s) 479, 1394
BstFNI CGCG 2 cut(s) 957, 2884
BstHHI GCGC 2 cut(s) 710, 2279
BstMAI GTCTC 4 cut(s) 446, 1430, 2336, 2708
BstMWI GCNNNNNNNGC 7 cut(s) 228, 333, 1134, 1143, 1662, 2205, 2874
BstNI CCWGG 2 cut(s) 1008, 1555
BstNSI RCATGY 6 cut(s) 867, 1611, 1779, 2208, 2306, 2952
BstPAI GACNNNNGTC 1 cut(s) 853
BstSCI CCNGG 2 cut(s) 1006, 1553
BstSFI CTRYAG 2 cut(s) 2236, 2781
BstSNI TACGTA 1 cut(s) 547
BstUI CGCG 2 cut(s) 957, 2884
BstV1I GCAGC 4 cut(s) 215, 323, 1130, 2510
BstX2I RGATCY 4 cut(s) 403, 766, 1318, 1678
BstXI CCANNNNNNTGG 1 cut(s) 2718
BstYI RGATCY 4 cut(s) 403, 766, 1318, 1678
BsuI GTATCC 1 cut(s) 432
BsuRI GGCC 1 cut(s) 595
BtgI CCRYGG 2 cut(s) 102, 1040
BtrI CACGTC 1 cut(s) 400
BtsIMutI CAGTG 6 cut(s) 26, 211, 1119, 1300, 2363, 2432
Cac8I GCNNGC 4 cut(s) 874, 1786, 2206, 2950
CciI TCATGA 5 cut(s) 820, 924, 1732, 1888, 2904
CfoI GCGC 2 cut(s) 710, 2279
Cfr13I GGNCC 4 cut(s) 133, 354, 1266, 2379
CseI GACGC 4 cut(s) 463, 946, 2309, 2941
Csp6I GTAC 4 cut(s) 1336, 2069, 2395, 2818
CviQI GTAC 4 cut(s) 1336, 2069, 2395, 2818
DdeI CTNAG 8 cut(s) 111, 167, 450, 534, 664, 1023, 2153, 2549
DraI TTTAAA 2 cut(s) 783, 1695
EaeI YGGCCR 1 cut(s) 593
Eam1104I CTCTTC 3 cut(s) 309, 807, 2029
EarI CTCTTC 3 cut(s) 309, 807, 2029
EciI GGCGGA 1 cut(s) 1497
Eco105I TACGTA 1 cut(s) 547
Eco130I CCWWGG 4 cut(s) 102, 155, 762, 1070
Eco47I GGWCC 4 cut(s) 133, 354, 1266, 2379
Eco57I CTGAAG 3 cut(s) 290, 2094, 2408
Eco72I CACGTG 1 cut(s) 2730
EcoNI CCTNNNNNAGG 2 cut(s) 479, 1394
EcoRII CCWGG 2 cut(s) 1006, 1553
EcoT14I CCWWGG 4 cut(s) 102, 155, 762, 1070
EcoT22I ATGCAT 1 cut(s) 2757
ErhI CCWWGG 4 cut(s) 102, 155, 762, 1070
Esp3I CGTCTC 1 cut(s) 446
FalI AAGNNNNNCTT 4 cut(s) 927, 959, 1839, 1871
FauI CCCGC 2 cut(s) 869, 1781
FauNDI CATATG 2 cut(s) 1817, 2098
FbaI TGATCA 4 cut(s) 823, 979, 1297, 1891
Fnu4HI GCNGC 5 cut(s) 229, 337, 593, 1144, 2524
Fsp4HI GCNGC 5 cut(s) 229, 337, 593, 1144, 2524
FspBI CTAG 4 cut(s) 2001, 2289, 2748, 2957
FspI TGCGCA 1 cut(s) 709
GlaI GCGC 2 cut(s) 709, 2278
GluI GCNGC 5 cut(s) 229, 337, 593, 1144, 2524
GsuI CTGGAG 2 cut(s) 30, 1461
HaeIII GGCC 1 cut(s) 595
HapII CCGG 2 cut(s) 677, 1182
HgaI GACGC 4 cut(s) 463, 946, 2309, 2941
HhaI GCGC 2 cut(s) 710, 2279
Hin6I GCGC 2 cut(s) 708, 2277
HinP1I GCGC 2 cut(s) 708, 2277
HincII GTYRAC 2 cut(s) 1583, 2629
HindII GTYRAC 2 cut(s) 1583, 2629
HpaII CCGG 2 cut(s) 677, 1182
Hpy166II GTNNAC 6 cut(s) 81, 188, 625, 1537, 1583, 2629
Hpy188I TCNGA 9 cut(s) 112, 268, 601, 619, 807, 1600, 1956, 1992, 2443
Hpy8I GTNNAC 6 cut(s) 81, 188, 625, 1537, 1583, 2629
Hpy99I CGWCG 2 cut(s) 77, 401
HpyCH4III ACNGT 6 cut(s) 503, 986, 1041, 1232, 1304, 2240
HpyCH4IV ACGT 7 cut(s) 399, 546, 772, 1878, 2163, 2729, 2934
HpyF10VI GCNNNNNNNGC 7 cut(s) 228, 333, 1134, 1143, 1662, 2205, 2874
HpyF3I CTNAG 8 cut(s) 111, 167, 450, 534, 664, 1023, 2153, 2549
HpySE526I ACGT 7 cut(s) 399, 546, 772, 1878, 2163, 2729, 2934
HspAI GCGC 2 cut(s) 708, 2277
Kpn2I TCCGGA 1 cut(s) 1181
KpnI GGTACC 1 cut(s) 2398
Ksp22I TGATCA 4 cut(s) 823, 979, 1297, 1891
LmnI GCTCC 4 cut(s) 663, 1399, 1575, 2368
Lsp1109I GCAGC 4 cut(s) 215, 323, 1130, 2510
LweI GCATC 7 cut(s) 141, 466, 496, 1056, 1381, 1411, 1513
MaeI CTAG 4 cut(s) 2001, 2289, 2748, 2957
MaeII ACGT 7 cut(s) 399, 546, 772, 1878, 2163, 2729, 2934
MbiI CCGCTC 1 cut(s) 1402
MfeI CAATTG 1 cut(s) 1313
MflI RGATCY 4 cut(s) 403, 766, 1318, 1678
MhlI GDGCHC 2 cut(s) 2365, 2841
MluI ACGCGT 1 cut(s) 955
MlyI GAGTC 7 cut(s) 183, 269, 843, 1184, 1755, 2151, 2771
MmeI TCCRAC 2 cut(s) 301, 994
Mph1103I ATGCAT 1 cut(s) 2757
MroI TCCGGA 1 cut(s) 1181
MslI CAYNNNNRTG 3 cut(s) 862, 2166, 2807
MspCI CTTAAG 2 cut(s) 653, 1565
MspI CCGG 2 cut(s) 677, 1182
MspR9I CCNGG 2 cut(s) 1008, 1555
MunI CAATTG 1 cut(s) 1313
MvaI CCWGG 2 cut(s) 1008, 1555
MvnI CGCG 2 cut(s) 957, 2884
MwoI GCNNNNNNNGC 7 cut(s) 228, 333, 1134, 1143, 1662, 2205, 2874
NcoI CCATGG 1 cut(s) 102
NdeI CATATG 2 cut(s) 1817, 2098
NlaIV GGNNCC 2 cut(s) 1559, 2396
NmuCI GTSAC 6 cut(s) 362, 1117, 1829, 2252, 2412, 2774
NsbI TGCGCA 1 cut(s) 709
NsiI ATGCAT 1 cut(s) 2757
NspI RCATGY 6 cut(s) 867, 1611, 1779, 2208, 2306, 2952
NspV TTCGAA 2 cut(s) 313, 2018
PaeI GCATGC 2 cut(s) 2208, 2952
PagI TCATGA 5 cut(s) 820, 924, 1732, 1888, 2904
PciI ACATGT 3 cut(s) 863, 1607, 1775
PfeI GAWTC 4 cut(s) 107, 928, 1112, 2911
PkrI GCNGC 5 cut(s) 230, 338, 594, 1145, 2525
PleI GAGTC 7 cut(s) 183, 268, 843, 1183, 1755, 2151, 2771
PmaCI CACGTG 1 cut(s) 2730
PmlI CACGTG 1 cut(s) 2730
PpsI GAGTC 7 cut(s) 183, 268, 843, 1183, 1755, 2151, 2771
Ppu21I YACGTR 2 cut(s) 547, 2730
PscI ACATGT 3 cut(s) 863, 1607, 1775
PshAI GACNNNNGTC 1 cut(s) 853
PshBI ATTAAT 1 cut(s) 969
Psp1406I AACGTT 1 cut(s) 1878
Psp6I CCWGG 2 cut(s) 1006, 1553
PspCI CACGTG 1 cut(s) 2730
PspGI CCWGG 2 cut(s) 1006, 1553
PspN4I GGNNCC 2 cut(s) 1559, 2396
PspPI GGNCC 4 cut(s) 133, 354, 1266, 2379
PsuI RGATCY 4 cut(s) 403, 766, 1318, 1678
RsaI GTAC 4 cut(s) 1337, 2070, 2396, 2819
RsaNI GTAC 4 cut(s) 1336, 2069, 2395, 2818
RseI CAYNNNNRTG 3 cut(s) 862, 2166, 2807
SatI GCNGC 5 cut(s) 229, 337, 593, 1144, 2524
Sau96I GGNCC 4 cut(s) 133, 354, 1266, 2379
SchI GAGTC 7 cut(s) 183, 269, 843, 1184, 1755, 2151, 2771
ScrFI CCNGG 2 cut(s) 1008, 1555
SduI GDGCHC 2 cut(s) 2365, 2841
SfaNI GCATC 7 cut(s) 141, 466, 496, 1056, 1381, 1411, 1513
SfcI CTRYAG 2 cut(s) 2236, 2781
SfuI TTCGAA 2 cut(s) 313, 2018
SinI GGWCC 4 cut(s) 133, 354, 1266, 2379
SmiMI CAYNNNNRTG 3 cut(s) 862, 2166, 2807
SmlI CTYRAG 4 cut(s) 653, 1220, 1394, 1565
SmoI CTYRAG 4 cut(s) 653, 1220, 1394, 1565
SnaBI TACGTA 1 cut(s) 547
SphI GCATGC 2 cut(s) 2208, 2952
SsiI CCGC 7 cut(s) 592, 876, 1402, 1508, 1703, 1788, 2194
SspI AATATT 2 cut(s) 1630, 2825
SspMI CTAG 4 cut(s) 2001, 2289, 2748, 2957
StyD4I CCNGG 2 cut(s) 1006, 1553
StyI CCWWGG 4 cut(s) 102, 155, 762, 1070
TaaI ACNGT 6 cut(s) 503, 986, 1041, 1232, 1304, 2240
TaiI ACGT 7 cut(s) 402, 549, 775, 1881, 2166, 2732, 2937
TauI GCSGC 1 cut(s) 595
TfiI GAWTC 4 cut(s) 107, 928, 1112, 2911
TscAI CASTG 6 cut(s) 33, 211, 1126, 1307, 2363, 2432
TseFI GTSAC 6 cut(s) 362, 1117, 1829, 2252, 2412, 2774
TseI GCWGC 4 cut(s) 228, 336, 1143, 2523
Tsp45I GTSAC 6 cut(s) 362, 1117, 1829, 2252, 2412, 2774
TspDTI ATGAA 9 cut(s) 153, 570, 913, 920, 1144, 2003, 2309, 2921, 2943
TspGWI ACGGA 3 cut(s) 738, 1650, 1754
TspRI CASTG 6 cut(s) 33, 211, 1126, 1307, 2363, 2432
Vha464I CTTAAG 2 cut(s) 653, 1565
VpaK11BI GGWCC 4 cut(s) 133, 354, 1266, 2379
VspI ATTAAT 1 cut(s) 969
XagI CCTNNNNNAGG 2 cut(s) 479, 1394
XapI RAATTY 4 cut(s) 808, 1018, 1720, 1930
XceI RCATGY 6 cut(s) 867, 1611, 1779, 2208, 2306, 2952
XcmI CCANNNNNNNNNTGG 3 cut(s) 251, 1166, 2276
XspI CTAG 4 cut(s) 2001, 2289, 2748, 2957
Zsp2I ATGCAT 1 cut(s) 2757
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.