BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C1_2 | PF03107 | 65 - 108 | 6e-08 | C1 domain |
| C1_2 | PF03107 | 121 - 165 | 3e-06 | C1 domain |
| C1_2 | PF03107 | 181 - 228 | 3e-09 | C1 domain |
| C1_2 | PF03107 | 242 - 283 | 2.2e-12 | C1 domain |
| C1_2 | PF03107 | 293 - 341 | 5.7e-09 | C1 domain |
| C1_2 | PF03107 | 376 - 425 | 6e-13 | C1 domain |
| C1_2 | PF03107 | 539 - 587 | 6.8e-11 | C1 domain |
| C1-like_CT | PF22926 | 607 - 649 | 5.6e-18 | C1 domain-like, C-terminal |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 616, 1832 |
| AccI | GTMKAC | 1 cut(s) | 1620 |
| AciI | CCGC | 5 cut(s) | 503, 783, 972, 988, 1425 |
| AclWI | GGATC | 7 cut(s) | 34, 272, 279, 318, 404, 1905, 1918 |
| AcsI | RAATTY | 1 cut(s) | 925 |
| AcuI | CTGAAG | 2 cut(s) | 649, 1089 |
| AcvI | CACGTG | 1 cut(s) | 1722 |
| AdeI | CACNNNGTG | 1 cut(s) | 1362 |
| AfaI | GTAC | 6 cut(s) | 329, 1391, 1419, 1708, 1795, 1886 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 526, 955, 1399 |
| AflII | CTTAAG | 2 cut(s) | 215, 560 |
| AflIII | ACRYGT | 3 cut(s) | 770, 1719, 1721 |
| AgsI | TTSAA | 8 cut(s) | 167, 188, 224, 304, 721, 1431, 1553, 1900 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1525 |
| AjnI | CCWGG | 1 cut(s) | 1786 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 745, 777 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1431, 1463 |
| AluBI | AGCT | 9 cut(s) | 135, 141, 220, 376, 565, 669, 1054, 1739, 1919 |
| AluI | AGCT | 9 cut(s) | 135, 141, 220, 376, 565, 669, 1054, 1739, 1919 |
| Alw21I | GWGCWC | 2 cut(s) | 1056, 1168 |
| Alw26I | GTCTC | 6 cut(s) | 201, 353, 789, 1223, 1761, 1851 |
| AlwI | GGATC | 7 cut(s) | 34, 272, 279, 318, 404, 1905, 1918 |
| ApoI | RAATTY | 1 cut(s) | 925 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 506, 538 |
| AspLEI | GCGC | 3 cut(s) | 617, 1274, 1833 |
| AsuHPI | GGTGA | 9 cut(s) | 200, 359, 370, 533, 733, 881, 1111, 1253, 1724 |
| AsuII | TTCGAA | 1 cut(s) | 1013 |
| AsuNHI | GCTAGC | 1 cut(s) | 416 |
| BamHI | GGATCC | 1 cut(s) | 1910 |
| BanII | GRGCYC | 1 cut(s) | 1056 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 15, 47 |
| BauI | CACGAG | 1 cut(s) | 44 |
| BbrPI | CACGTG | 1 cut(s) | 1722 |
| Bbv12I | GWGCWC | 2 cut(s) | 1056, 1168 |
| BbvCI | CCTCAGC | 1 cut(s) | 1915 |
| BccI | CCATC | 6 cut(s) | 590, 706, 1458, 1473, 1756, 1943 |
| BceAI | ACGGC | 1 cut(s) | 46 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 395, 429 |
| BciT130I | CCWGG | 1 cut(s) | 1788 |
| BciVI | GTATCC | 1 cut(s) | 1971 |
| BclI | TGATCA | 1 cut(s) | 886 |
| BcoDI | GTCTC | 6 cut(s) | 201, 353, 789, 1223, 1761, 1851 |
| BfaI | CTAG | 6 cut(s) | 78, 417, 1026, 1284, 1590, 1740 |
| BfmI | CTRYAG | 2 cut(s) | 136, 1561 |
| BfrI | CTTAAG | 2 cut(s) | 215, 560 |
| BfuI | GTATCC | 1 cut(s) | 1971 |
| BglII | AGATCT | 1 cut(s) | 291 |
| Bme1390I | CCNGG | 1 cut(s) | 1788 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1525 |
| BmiI | GGNNCC | 1 cut(s) | 1912 |
| BmrFI | CCNGG | 1 cut(s) | 1788 |
| BmsI | GCATC | 3 cut(s) | 48, 58, 373 |
| BmtI | GCTAGC | 1 cut(s) | 420 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1915 |
| Bpu14I | TTCGAA | 1 cut(s) | 1013 |
| BpuEI | CTTGAG | 1 cut(s) | 371 |
| BsaAI | YACGTR | 2 cut(s) | 1545, 1722 |
| BsaI | GGTCTC | 1 cut(s) | 1223 |
| BsaWI | WCCGGW | 1 cut(s) | 583 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 422, 452 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 526, 955, 1399 |
| Bse1I | ACTGG | 3 cut(s) | 111, 1393, 1676 |
| Bse3DI | GCAATG | 4 cut(s) | 827, 1201, 1516, 1876 |
| BseBI | CCWGG | 1 cut(s) | 1788 |
| BseGI | GGATG | 5 cut(s) | 1039, 1345, 1450, 1468, 1627 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 526, 955, 1399 |
| BseMI | GCAATG | 4 cut(s) | 827, 1201, 1516, 1876 |
| BseMII | CTCAG | 1 cut(s) | 1929 |
| BseNI | ACTGG | 3 cut(s) | 111, 1393, 1676 |
| BseYI | CCCAGC | 1 cut(s) | 1206 |
| BsgI | GTGCAG | 1 cut(s) | 1339 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1056, 1168 |
| BsiSI | CCGG | 3 cut(s) | 506, 584, 949 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 526, 955, 1399 |
| BsmAI | GTCTC | 6 cut(s) | 201, 353, 789, 1223, 1761, 1851 |
| BsmBI | CGTCTC | 2 cut(s) | 201, 353 |
| Bso31I | GGTCTC | 1 cut(s) | 1223 |
| Bsp119I | TTCGAA | 1 cut(s) | 1013 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1056, 1168 |
| BspACI | CCGC | 5 cut(s) | 503, 783, 972, 988, 1425 |
| BspCNI | CTCAG | 1 cut(s) | 1928 |
| BspHI | TCATGA | 1 cut(s) | 831 |
| BspLI | GGNNCC | 1 cut(s) | 1912 |
| BspOI | GCTAGC | 1 cut(s) | 420 |
| BspPI | GGATC | 7 cut(s) | 34, 272, 279, 318, 404, 1905, 1918 |
| BspQI | GCTCTTC | 1 cut(s) | 1173 |
| BspT104I | TTCGAA | 1 cut(s) | 1013 |
| BspTI | CTTAAG | 2 cut(s) | 215, 560 |
| BspTNI | GGTCTC | 1 cut(s) | 1223 |
| BsrDI | GCAATG | 4 cut(s) | 827, 1201, 1516, 1876 |
| BsrI | ACTGG | 3 cut(s) | 111, 1393, 1676 |
| BssSI | CACGAG | 1 cut(s) | 44 |
| Bst2BI | CACGAG | 1 cut(s) | 44 |
| Bst2UI | CCWGG | 1 cut(s) | 1788 |
| Bst4CI | ACNGT | 6 cut(s) | 36, 320, 410, 893, 1422, 1443 |
| Bst6I | CTCTTC | 2 cut(s) | 1065, 1173 |
| BstAFI | CTTAAG | 2 cut(s) | 215, 560 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1200, 1515 |
| BstBAI | YACGTR | 2 cut(s) | 1545, 1722 |
| BstBI | TTCGAA | 1 cut(s) | 1013 |
| BstC8I | GCNNGC | 3 cut(s) | 418, 781, 1201 |
| BstDEI | CTNAG | 2 cut(s) | 1148, 1915 |
| BstF5I | GGATG | 5 cut(s) | 1039, 1345, 1450, 1468, 1627 |
| BstHHI | GCGC | 3 cut(s) | 617, 1274, 1833 |
| BstMAI | GTCTC | 6 cut(s) | 201, 353, 789, 1223, 1761, 1851 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 96, 1200, 1515 |
| BstNI | CCWGG | 1 cut(s) | 1788 |
| BstNSI | RCATGY | 2 cut(s) | 774, 1885 |
| BstSCI | CCNGG | 1 cut(s) | 1786 |
| BstSFI | CTRYAG | 2 cut(s) | 136, 1561 |
| BstX2I | RGATCY | 4 cut(s) | 271, 291, 310, 1910 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1214 |
| BstYI | RGATCY | 4 cut(s) | 271, 291, 310, 1910 |
| BsuI | GTATCC | 1 cut(s) | 1971 |
| BtsCI | GGATG | 5 cut(s) | 1039, 1345, 1450, 1468, 1627 |
| BtsI | GCAGTG | 2 cut(s) | 1351, 1356 |
| BtsIMutI | CAGTG | 4 cut(s) | 118, 1351, 1356, 1400 |
| Cac8I | GCNNGC | 3 cut(s) | 418, 781, 1201 |
| CciI | TCATGA | 1 cut(s) | 831 |
| CfoI | GCGC | 3 cut(s) | 617, 1274, 1833 |
| CseI | GACGC | 3 cut(s) | 105, 370, 1631 |
| Csp6I | GTAC | 6 cut(s) | 328, 1390, 1418, 1707, 1794, 1885 |
| CviQI | GTAC | 6 cut(s) | 328, 1390, 1418, 1707, 1794, 1885 |
| DdeI | CTNAG | 2 cut(s) | 1148, 1915 |
| DraI | TTTAAA | 2 cut(s) | 690, 1938 |
| DraIII | CACNNNGTG | 1 cut(s) | 1362 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1525 |
| Eam1104I | CTCTTC | 2 cut(s) | 1065, 1173 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1525 |
| EarI | CTCTTC | 2 cut(s) | 1065, 1173 |
| EciI | GGCGGA | 1 cut(s) | 492 |
| Ecl136II | GAGCTC | 1 cut(s) | 1054 |
| Eco24I | GRGCYC | 1 cut(s) | 1056 |
| Eco31I | GGTCTC | 1 cut(s) | 1223 |
| Eco53kI | GAGCTC | 1 cut(s) | 1054 |
| Eco57I | CTGAAG | 2 cut(s) | 649, 1089 |
| Eco72I | CACGTG | 1 cut(s) | 1722 |
| EcoICRI | GAGCTC | 1 cut(s) | 1054 |
| EcoRI | GAATTC | 1 cut(s) | 925 |
| EcoRII | CCWGG | 1 cut(s) | 1786 |
| EcoT38I | GRGCYC | 1 cut(s) | 1056 |
| Esp3I | CGTCTC | 2 cut(s) | 201, 353 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 834, 866 |
| FauI | CCCGC | 2 cut(s) | 776, 965 |
| FauNDI | CATATG | 3 cut(s) | 812, 1093, 1819 |
| FbaI | TGATCA | 1 cut(s) | 886 |
| FblI | GTMKAC | 1 cut(s) | 1620 |
| FokI | GGATG | 5 cut(s) | 1046, 1352, 1437, 1455, 1614 |
| FriOI | GRGCYC | 1 cut(s) | 1056 |
| FspBI | CTAG | 6 cut(s) | 78, 417, 1026, 1284, 1590, 1740 |
| FspI | TGCGCA | 2 cut(s) | 616, 1832 |
| GlaI | GCGC | 3 cut(s) | 616, 1273, 1832 |
| GsaI | CCCAGC | 1 cut(s) | 1210 |
| HapII | CCGG | 3 cut(s) | 506, 584, 949 |
| HgaI | GACGC | 3 cut(s) | 105, 370, 1631 |
| HhaI | GCGC | 3 cut(s) | 617, 1274, 1833 |
| Hin6I | GCGC | 3 cut(s) | 615, 1272, 1831 |
| HinP1I | GCGC | 3 cut(s) | 615, 1272, 1831 |
| HincII | GTYRAC | 2 cut(s) | 578, 1994 |
| HindII | GTYRAC | 2 cut(s) | 578, 1994 |
| HindIII | AAGCTT | 1 cut(s) | 218 |
| HinfI | GANTC | 8 cut(s) | 170, 499, 761, 1152, 1277, 1371, 1699, 1871 |
| HpaII | CCGG | 3 cut(s) | 506, 584, 949 |
| HphI | GGTGA | 9 cut(s) | 200, 359, 370, 533, 733, 881, 1111, 1253, 1724 |
| Hpy166II | GTNNAC | 7 cut(s) | 95, 208, 230, 532, 578, 1621, 1994 |
| Hpy188I | TCNGA | 7 cut(s) | 178, 358, 526, 595, 1438, 1704, 1965 |
| Hpy188III | TCNNGA | 6 cut(s) | 388, 734, 832, 842, 851, 1897 |
| Hpy8I | GTNNAC | 7 cut(s) | 95, 208, 230, 532, 578, 1621, 1994 |
| HpyAV | CCTTC | 6 cut(s) | 392, 487, 866, 946, 1052, 1894 |
| HpyCH4III | ACNGT | 6 cut(s) | 36, 320, 410, 893, 1422, 1443 |
| HpyCH4IV | ACGT | 5 cut(s) | 1315, 1544, 1721, 1802, 1990 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 96, 1200, 1515 |
| HpyF3I | CTNAG | 2 cut(s) | 1148, 1915 |
| HpySE526I | ACGT | 5 cut(s) | 1315, 1544, 1721, 1802, 1990 |
| HspAI | GCGC | 3 cut(s) | 615, 1272, 1831 |
| Ksp22I | TGATCA | 1 cut(s) | 886 |
| LguI | GCTCTTC | 1 cut(s) | 1173 |
| LmnI | GCTCC | 1 cut(s) | 570 |
| LweI | GCATC | 3 cut(s) | 48, 58, 373 |
| MaeI | CTAG | 6 cut(s) | 78, 417, 1026, 1284, 1590, 1740 |
| MaeII | ACGT | 5 cut(s) | 1315, 1544, 1721, 1802, 1990 |
| MaeIII | GTNAC | 6 cut(s) | 27, 296, 659, 1327, 1676, 1872 |
| MboII | GAAGA | 7 cut(s) | 179, 1082, 1091, 1160, 1250, 1508, 1978 |
| MfeI | CAATTG | 1 cut(s) | 1522 |
| MflI | RGATCY | 4 cut(s) | 271, 291, 310, 1910 |
| MhlI | GDGCHC | 2 cut(s) | 1056, 1168 |
| MluCI | AATT | 4 cut(s) | 67, 925, 1431, 1522 |
| MlyI | GAGTC | 2 cut(s) | 1365, 1880 |
| MseI | TTAA | 5 cut(s) | 216, 561, 689, 1799, 1937 |
| MslI | CAYNNNNRTG | 4 cut(s) | 243, 465, 815, 1161 |
| MspA1I | CMGCKG | 1 cut(s) | 988 |
| MspCI | CTTAAG | 2 cut(s) | 215, 560 |
| MspI | CCGG | 3 cut(s) | 506, 584, 949 |
| MspR9I | CCNGG | 1 cut(s) | 1788 |
| MunI | CAATTG | 1 cut(s) | 1522 |
| MvaI | CCWGG | 1 cut(s) | 1788 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 96, 1200, 1515 |
| NdeI | CATATG | 3 cut(s) | 812, 1093, 1819 |
| NheI | GCTAGC | 1 cut(s) | 416 |
| NlaIV | GGNNCC | 1 cut(s) | 1912 |
| NmuCI | GTSAC | 4 cut(s) | 27, 296, 1676, 1872 |
| NsbI | TGCGCA | 2 cut(s) | 616, 1832 |
| NspI | RCATGY | 2 cut(s) | 774, 1885 |
| NspV | TTCGAA | 1 cut(s) | 1013 |
| PagI | TCATGA | 1 cut(s) | 831 |
| PciI | ACATGT | 1 cut(s) | 770 |
| PciSI | GCTCTTC | 1 cut(s) | 1173 |
| PfeI | GAWTC | 6 cut(s) | 170, 499, 761, 1152, 1277, 1699 |
| PleI | GAGTC | 2 cut(s) | 1365, 1879 |
| PmaCI | CACGTG | 1 cut(s) | 1722 |
| PmlI | CACGTG | 1 cut(s) | 1722 |
| PpsI | GAGTC | 2 cut(s) | 1365, 1879 |
| Ppu21I | YACGTR | 2 cut(s) | 1545, 1722 |
| PscI | ACATGT | 1 cut(s) | 770 |
| Psp124BI | GAGCTC | 1 cut(s) | 1056 |
| Psp6I | CCWGG | 1 cut(s) | 1786 |
| PspCI | CACGTG | 1 cut(s) | 1722 |
| PspFI | CCCAGC | 1 cut(s) | 1206 |
| PspGI | CCWGG | 1 cut(s) | 1786 |
| PspN4I | GGNNCC | 1 cut(s) | 1912 |
| PsuI | RGATCY | 4 cut(s) | 271, 291, 310, 1910 |
| RsaI | GTAC | 6 cut(s) | 329, 1391, 1419, 1708, 1795, 1886 |
| RsaNI | GTAC | 6 cut(s) | 328, 1390, 1418, 1707, 1794, 1885 |
| RseI | CAYNNNNRTG | 4 cut(s) | 243, 465, 815, 1161 |
| SacI | GAGCTC | 1 cut(s) | 1056 |
| SapI | GCTCTTC | 1 cut(s) | 1173 |
| SaqAI | TTAA | 5 cut(s) | 216, 561, 689, 1799, 1937 |
| SchI | GAGTC | 2 cut(s) | 1365, 1880 |
| ScrFI | CCNGG | 1 cut(s) | 1788 |
| SduI | GDGCHC | 2 cut(s) | 1056, 1168 |
| SfaNI | GCATC | 3 cut(s) | 48, 58, 373 |
| SfcI | CTRYAG | 2 cut(s) | 136, 1561 |
| SfuI | TTCGAA | 1 cut(s) | 1013 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 243, 465, 815, 1161 |
| SmlI | CTYRAG | 3 cut(s) | 215, 386, 560 |
| SmoI | CTYRAG | 3 cut(s) | 215, 386, 560 |
| Sse9I | AATT | 4 cut(s) | 67, 925, 1431, 1522 |
| SsiI | CCGC | 5 cut(s) | 503, 783, 972, 988, 1425 |
| SspMI | CTAG | 6 cut(s) | 78, 417, 1026, 1284, 1590, 1740 |
| SstI | GAGCTC | 1 cut(s) | 1056 |
| StyD4I | CCNGG | 1 cut(s) | 1786 |
| TaaI | ACNGT | 6 cut(s) | 36, 320, 410, 893, 1422, 1443 |
| TaiI | ACGT | 5 cut(s) | 1318, 1547, 1724, 1805, 1993 |
| TaqI | TCGA | 4 cut(s) | 405, 1013, 1056, 1581 |
| TasI | AATT | 4 cut(s) | 67, 925, 1431, 1522 |
| TatI | WGTACW | 3 cut(s) | 1417, 1706, 1793 |
| TfiI | GAWTC | 6 cut(s) | 170, 499, 761, 1152, 1277, 1699 |
| Tru1I | TTAA | 5 cut(s) | 216, 561, 689, 1799, 1937 |
| Tru9I | TTAA | 5 cut(s) | 216, 561, 689, 1799, 1937 |
| TscAI | CASTG | 4 cut(s) | 118, 1358, 1363, 1400 |
| TseFI | GTSAC | 4 cut(s) | 27, 296, 1676, 1872 |
| Tsp45I | GTSAC | 4 cut(s) | 27, 296, 1676, 1872 |
| TspGWI | ACGGA | 2 cut(s) | 898, 1059 |
| TspRI | CASTG | 4 cut(s) | 118, 1358, 1363, 1400 |
| Vha464I | CTTAAG | 2 cut(s) | 215, 560 |
| XapI | RAATTY | 1 cut(s) | 925 |
| XceI | RCATGY | 2 cut(s) | 774, 1885 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1229 |
| XmiI | GTMKAC | 1 cut(s) | 1620 |
| XspI | CTAG | 6 cut(s) | 78, 417, 1026, 1284, 1590, 1740 |