AT3G45840

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000226
Physical Location & Seq
Reverse (-)
16847904 .. 16849944
2041 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G45840.1

Sequence Viewer

Length: 1776 bp
ATGGCTATATTATCGATAAAACTACCTATTCACATACATCCTTTGTCCCTTTCCTTTCGATTTCATGATCGGTGTGAAGGCTGCAGTTTTCGAAACCAAGGTGAATACTATGGAGGCTATCGATGTAATGATTCTGACTGCAATCGTGTTCTGTTTCACAAGGAATGCGCCGAGTCACCACTTGAAATCAACCACCCTTCTCACCCGGAACATCCTCTCCGGCTTACAGAGAGGCCTCCAAGATATGAATGTGATATATGCGGCATTCATCACTTAGCTGATGTGCCGTATTTTTATCATTGTTCCATATGTGACTTCAACGTCGACACATCATGTGCGCGGAAACCACCACCGCCACCTACTCATGATTTTCAAGACCTACCATTTGTCTTTCCAAAGATAAGTGGAATATACAATTGTTGTGGAGTATGTGGGCACTCAGTTGTTGCTGGTAAATATTATTATTCACTACCTTCTCGGGATCAGTATGCTCATTTGGAGTGTATATATCATGAGAAAAAAGTAAACCTTCCTTTTCACCCTAATCACCCTCTTGAGCTCACCATATCTAAATCCCTCCCTGATGATGCCGAAAAAGCATGTGTTTTGTGTGGAGTGAGATCGGAAATTGTGATGTATTACTGCTTAATATGTGACTTCAGCATGTGCCTAAACTGTGTGAGAAGCCCTCCACCTCTTACGGCCAAGTCTCTTATTTATGTCTTCAATGTGATGTTATGGTCCATCGAAGTTGTATTGGCTTACCGCATTGAATCAGTTTCATGGGGCTTCATTTGCCCCAAATATGTTGTTCATTCGCAATGTGCAACAAGTTACAACGTTTGGGATGGGATAGAACTTGAAGGGATACCAGAAGAAGCTGAAGATCTTCCGTTTAAGGTGGTTGGTGATAACCTGATAAATCATTTCAGCCACGAGAAACATAATCTAAGGCTTACCAATGAAGACATTATTTATGATGAAAGTAGCCGATGTGAAGCATGCATCTTTCCTCGCAACTCTGGTTCGATATATTGTTGCGATCAATGTACTTTTTTCCTTCATGAAAAATGTGCACATCTGCCTATGAAGAGACGCCACTTAATATACAACAGACCATTTACCCTACATGCTAGAGGAAAAGATCTCCAAATAGATTGGTTCTCATGTGACGCTTGTGGAAAACAATCGACTGGTTTCAGGTACATCTCTGATGATTTAATGCTTGATGTACATTGCAGTTCCGTTTCCGAACCGTTCGTCCATGATGGCCATGTACATCCCTTATATTACAAAGAAGAAGCCAGTACCAAGTGTGATTCATGTCATAAGCTGTCTTATAACATGCTTGGTTGTGATGTTTGTGACTTTAGTTTGGATTTTTGTTGTGCAAATTTGCCAAAGACACTTAAGCACAAATACGATAGACATCCTCTCTCCCTATGTTATGGTGAAAAGGCAAGTGGTAAATATTGTTGTGATATTTGCGAGACGGAAATGGATCCAAGTAAGTGGTTCTACACATGCGATGATTGTGTGGTCACATTCCATATTGACTGTGTTTTTGGGGATTTCTCACGCTTCATCGCAGGATCCATATTCGAGACTATAATATACACATTTGAAGTGGTTCCTACCAAAGATACTACACGACAGCTATGCTCCCAGTGTCACTCTCGATGCAAAACACCTTTCATTCTAAAGGCTCTTAGCCAAACTGAAGATTATTGTATTTGTTCTTTCAAGTGTCTTAGTTCATATTTTTCTAAGTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2

Protein Analysis

591

Amino Acids

67.91

Weight (kDa)

6.02

Isoelectric Point (pI)

52.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 66 - 113 1.2e-10 C1 domain
C1_2 PF03107 178 - 227 2.5e-09 C1 domain
C1_2 PF03107 310 - 359 3.6e-10 C1 domain
C1_2 PF03107 473 - 521 9.1e-11 C1 domain
C1-like_CT PF22926 541 - 584 5.4e-13 C1 domain-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1341
AasI GACNNNNNNGTC 1 cut(s) 320
AccI GTMKAC 1 cut(s) 324
AccII CGCG 1 cut(s) 340
AciI CCGC 4 cut(s) 261, 340, 353, 766
AclI AACGTT 1 cut(s) 840
AclWI GGATC 5 cut(s) 489, 1496, 1509, 1587, 1600
AcoI YGGCCR 2 cut(s) 702, 1270
AcsI RAATTY 1 cut(s) 1393
AcuI CTGAAG 3 cut(s) 643, 903, 1740
AcyI GRCGYC 1 cut(s) 1096
AfaI GTAC 5 cut(s) 1051, 1205, 1233, 1278, 1309
AflII CTTAAG 1 cut(s) 1409
AgsI TTSAA 8 cut(s) 185, 319, 374, 727, 773, 863, 1625, 1744
AloI GAACNNNNNNTCC 4 cut(s) 201, 233, 1245, 1277
AluBI AGCT 5 cut(s) 278, 559, 881, 1333, 1657
AluI AGCT 5 cut(s) 278, 559, 881, 1333, 1657
Alw21I GWGCWC 2 cut(s) 561, 1078
Alw26I GTCTC 4 cut(s) 714, 1087, 1484, 1598
Alw44I GTGCAC 1 cut(s) 1074
AlwI GGATC 5 cut(s) 489, 1496, 1509, 1587, 1600
Ama87I CYCGRG 1 cut(s) 477
AoxI GGCC 3 cut(s) 233, 702, 1270
ApaLI GTGCAC 1 cut(s) 1074
ApeKI GCWGC 1 cut(s) 81
ApoI RAATTY 1 cut(s) 1393
ArsI GACNNNNNNTTYG 6 cut(s) 368, 400, 1245, 1277, 1547, 1579
Asp700I GAANNNNTTC 2 cut(s) 888, 1629
AspLEI GCGC 2 cut(s) 170, 340
AspS9I GGNCC 1 cut(s) 741
AsuC2I CCSGG 1 cut(s) 206
AsuHPI GGTGA 8 cut(s) 113, 168, 194, 530, 539, 553, 920, 1463
AsuII TTCGAA 1 cut(s) 91
AvaI CYCGRG 1 cut(s) 477
AvaII GGWCC 1 cut(s) 741
BaeGI GKGCMC 2 cut(s) 438, 1078
BalI TGGCCA 1 cut(s) 1272
BamHI GGATCC 2 cut(s) 1501, 1592
BanII GRGCYC 1 cut(s) 561
BauI CACGAG 1 cut(s) 935
BbsI GAAGAC 2 cut(s) 715, 972
Bbv12I GWGCWC 2 cut(s) 561, 1078
BbvI GCAGC 1 cut(s) 68
BccI CCATC 3 cut(s) 752, 842, 1262
BceAI ACGGC 2 cut(s) 271, 717
BcgI CGANNNNNNTGC 2 cut(s) 1641, 1675
BciVI GTATCC 1 cut(s) 861
BcnI CCSGG 1 cut(s) 206
BcoDI GTCTC 4 cut(s) 714, 1087, 1484, 1598
BfaI CTAG 1 cut(s) 1134
BfmI CTRYAG 1 cut(s) 82
BfrI CTTAAG 1 cut(s) 1409
BfuI GTATCC 1 cut(s) 861
BglII AGATCT 2 cut(s) 886, 1144
BisI GCNGC 2 cut(s) 82, 262
BlsI GCNGC 2 cut(s) 83, 263
Bme1390I CCNGG 1 cut(s) 206
Bme18I GGWCC 1 cut(s) 741
BmeT110I CYCGRG 1 cut(s) 477
BmgT120I GGNCC 1 cut(s) 741
BmiI GGNNCC 3 cut(s) 1503, 1594, 1632
BmrFI CCNGG 1 cut(s) 206
BmrI ACTGGG 1 cut(s) 1660
BmsI GCATC 3 cut(s) 577, 1014, 1670
BmuI ACTGGG 1 cut(s) 1660
BpiI GAAGAC 2 cut(s) 715, 972
BplI GAGNNNNNCTC 2 cut(s) 673, 705
Bpu14I TTCGAA 1 cut(s) 91
BpuEI CTTGAG 1 cut(s) 575
BpuMI CCSGG 1 cut(s) 206
Bsa29I ATCGAT 2 cut(s) 14, 121
BsaBI GATNNNNATC 1 cut(s) 1428
BsaHI GRCGYC 1 cut(s) 1096
BsaJI CCNNGG 1 cut(s) 97
BsaXI ACNNNNNCTCC 2 cut(s) 201, 231
Bse1I ACTGG 3 cut(s) 1198, 1305, 1666
Bse3DI GCAATG 2 cut(s) 827, 1234
Bse8I GATNNNNATC 1 cut(s) 1428
BseCI ATCGAT 2 cut(s) 14, 121
BseDI CCNNGG 1 cut(s) 97
BseGI GGATG 5 cut(s) 37, 211, 853, 1279, 1429
BseJI GATNNNNATC 1 cut(s) 1428
BseMI GCAATG 2 cut(s) 827, 1234
BseMII CTCAG 1 cut(s) 453
BseNI ACTGG 3 cut(s) 1198, 1305, 1666
BseSI GKGCMC 2 cut(s) 438, 1078
BseXI GCAGC 1 cut(s) 68
Bsh1236I CGCG 1 cut(s) 340
BshFI GGCC 3 cut(s) 235, 704, 1272
BshVI ATCGAT 2 cut(s) 14, 121
BsiHKAI GWGCWC 2 cut(s) 561, 1078
BsiHKCI CYCGRG 1 cut(s) 477
BsiSI CCGG 2 cut(s) 206, 220
BslFI GGGAC 1 cut(s) 31
BsmAI GTCTC 4 cut(s) 714, 1087, 1484, 1598
BsmBI CGTCTC 2 cut(s) 1087, 1484
BsmFI GGGAC 1 cut(s) 31
BsmI GAATGC 2 cut(s) 170, 264
BsnI GGCC 3 cut(s) 235, 704, 1272
BsoBI CYCGRG 1 cut(s) 477
Bsp119I TTCGAA 1 cut(s) 91
Bsp1286I GDGCHC 3 cut(s) 438, 561, 1078
Bsp1407I TGTACA 2 cut(s) 1231, 1276
Bsp143I GATC 8 cut(s) 67, 481, 620, 886, 1042, 1144, 1501, 1592
BspACI CCGC 4 cut(s) 261, 340, 353, 766
BspANI GGCC 3 cut(s) 235, 704, 1272
BspCNI CTCAG 1 cut(s) 452
BspDI ATCGAT 2 cut(s) 14, 121
BspFNI CGCG 1 cut(s) 340
BspHI TCATGA 4 cut(s) 64, 364, 511, 1063
BspLI GGNNCC 3 cut(s) 1503, 1594, 1632
BspMAI CTGCAG 1 cut(s) 86
BspPI GGATC 5 cut(s) 489, 1496, 1509, 1587, 1600
BspT104I TTCGAA 1 cut(s) 91
BspTI CTTAAG 1 cut(s) 1409
BsrDI GCAATG 2 cut(s) 827, 1234
BsrGI TGTACA 2 cut(s) 1231, 1276
BsrI ACTGG 3 cut(s) 1198, 1305, 1666
BssECI CCNNGG 1 cut(s) 97
BssMI GATC 8 cut(s) 67, 481, 620, 886, 1042, 1144, 1501, 1592
BssNI GRCGYC 1 cut(s) 1096
BssSI CACGAG 1 cut(s) 935
BssT1I CCWWGG 1 cut(s) 97
Bst2BI CACGAG 1 cut(s) 935
Bst4CI ACNGT 3 cut(s) 677, 1257, 1559
Bst6I CTCTTC 1 cut(s) 1085
BstACI GRCGYC 1 cut(s) 1096
BstAFI CTTAAG 1 cut(s) 1409
BstAUI TGTACA 2 cut(s) 1231, 1276
BstBI TTCGAA 1 cut(s) 91
BstC8I GCNNGC 1 cut(s) 1003
BstDEI CTNAG 6 cut(s) 274, 439, 950, 1709, 1751, 1767
BstF5I GGATG 5 cut(s) 37, 211, 853, 1279, 1429
BstFNI CGCG 1 cut(s) 340
BstHHI GCGC 2 cut(s) 170, 340
BstKTI GATC 8 cut(s) 70, 484, 623, 889, 1045, 1147, 1504, 1595
BstMAI GTCTC 4 cut(s) 714, 1087, 1484, 1598
BstMBI GATC 8 cut(s) 67, 481, 620, 886, 1042, 1144, 1501, 1592
BstMWI GCNNNNNNNGC 2 cut(s) 596, 795
BstNSI RCATGY 6 cut(s) 603, 667, 1005, 1133, 1348, 1527
BstSCI CCNGG 1 cut(s) 204
BstSFI CTRYAG 1 cut(s) 82
BstSLI GKGCMC 2 cut(s) 438, 1078
BstUI CGCG 1 cut(s) 340
BstV1I GCAGC 1 cut(s) 68
BstV2I GAAGAC 2 cut(s) 715, 972
BstX2I RGATCY 4 cut(s) 886, 1144, 1501, 1592
BstXI CCANNNNNNTGG 1 cut(s) 1512
BstYI RGATCY 4 cut(s) 886, 1144, 1501, 1592
Bsu15I ATCGAT 2 cut(s) 14, 121
BsuI GTATCC 1 cut(s) 861
BsuRI GGCC 3 cut(s) 235, 704, 1272
BsuTUI ATCGAT 2 cut(s) 14, 121
BtgZI GCGATG 2 cut(s) 1542, 1570
BtsCI GGATG 5 cut(s) 37, 211, 853, 1279, 1429
BtsIMutI CAGTG 1 cut(s) 1673
Cac8I GCNNGC 1 cut(s) 1003
CciI TCATGA 4 cut(s) 64, 364, 511, 1063
CfoI GCGC 2 cut(s) 170, 340
Cfr13I GGNCC 1 cut(s) 741
ClaI ATCGAT 2 cut(s) 14, 121
CseI GACGC 2 cut(s) 1104, 1181
Csp6I GTAC 5 cut(s) 1050, 1204, 1232, 1277, 1308
CspCI CAANNNNNGTGG 2 cut(s) 403, 438
CviQI GTAC 5 cut(s) 1050, 1204, 1232, 1277, 1308
DdeI CTNAG 6 cut(s) 274, 439, 950, 1709, 1751, 1767
DpnI GATC 8 cut(s) 69, 483, 622, 888, 1044, 1146, 1503, 1594
DpnII GATC 8 cut(s) 67, 481, 620, 886, 1042, 1144, 1501, 1592
DrdI GACNNNNNNGTC 1 cut(s) 320
DseDI GACNNNNNNGTC 1 cut(s) 320
EaeI YGGCCR 2 cut(s) 702, 1270
Eam1104I CTCTTC 1 cut(s) 1085
EarI CTCTTC 1 cut(s) 1085
Ecl136II GAGCTC 1 cut(s) 559
Eco130I CCWWGG 1 cut(s) 97
Eco147I AGGCCT 1 cut(s) 235
Eco24I GRGCYC 1 cut(s) 561
Eco47I GGWCC 1 cut(s) 741
Eco53kI GAGCTC 1 cut(s) 559
Eco57I CTGAAG 3 cut(s) 643, 903, 1740
Eco88I CYCGRG 1 cut(s) 477
EcoICRI GAGCTC 1 cut(s) 559
EcoT14I CCWWGG 1 cut(s) 97
EcoT22I ATGCAT 1 cut(s) 1007
EcoT38I GRGCYC 1 cut(s) 561
ErhI CCWWGG 1 cut(s) 97
Esp3I CGTCTC 2 cut(s) 1087, 1484
FalI AAGNNNNNCTT 2 cut(s) 513, 545
FaqI GGGAC 1 cut(s) 31
FauNDI CATATG 1 cut(s) 308
FblI GTMKAC 1 cut(s) 324
Fnu4HI GCNGC 2 cut(s) 82, 262
FokI GGATG 5 cut(s) 24, 198, 860, 1266, 1416
FriOI GRGCYC 1 cut(s) 561
Fsp4HI GCNGC 2 cut(s) 82, 262
FspBI CTAG 1 cut(s) 1134
GlaI GCGC 2 cut(s) 169, 339
GluI GCNGC 2 cut(s) 82, 262
HaeIII GGCC 3 cut(s) 235, 704, 1272
HapII CCGG 2 cut(s) 206, 220
HgaI GACGC 2 cut(s) 1104, 1181
HhaI GCGC 2 cut(s) 170, 340
Hin1I GRCGYC 1 cut(s) 1096
Hin6I GCGC 2 cut(s) 168, 338
HinP1I GCGC 2 cut(s) 168, 338
HincII GTYRAC 1 cut(s) 325
HindII GTYRAC 1 cut(s) 325
HinfI GANTC 4 cut(s) 131, 173, 773, 1319
HpaII CCGG 2 cut(s) 206, 220
HphI GGTGA 8 cut(s) 113, 168, 194, 530, 539, 553, 920, 1463
Hpy166II GTNNAC 3 cut(s) 325, 526, 1076
Hpy188I TCNGA 4 cut(s) 136, 625, 1213, 1252
Hpy188III TCNNGA 9 cut(s) 65, 365, 374, 479, 512, 554, 1064, 1603, 1677
Hpy8I GTNNAC 3 cut(s) 325, 526, 1076
Hpy99I CGWCG 1 cut(s) 326
HpyAV CCTTC 6 cut(s) 71, 207, 483, 539, 857, 1070
HpyCH4III ACNGT 3 cut(s) 677, 1257, 1559
HpyCH4IV ACGT 2 cut(s) 321, 840
HpyCH4V TGCA 8 cut(s) 84, 141, 827, 1005, 1076, 1239, 1391, 1683
HpyF10VI GCNNNNNNNGC 2 cut(s) 596, 795
HpyF3I CTNAG 6 cut(s) 274, 439, 950, 1709, 1751, 1767
HpySE526I ACGT 2 cut(s) 321, 840
Hsp92I GRCGYC 1 cut(s) 1096
HspAI GCGC 2 cut(s) 168, 338
Kzo9I GATC 8 cut(s) 67, 481, 620, 886, 1042, 1144, 1501, 1592
LmnI GCTCC 1 cut(s) 1667
Lsp1109I GCAGC 1 cut(s) 68
LweI GCATC 3 cut(s) 577, 1014, 1670
MaeI CTAG 1 cut(s) 1134
MaeII ACGT 2 cut(s) 321, 840
MaeIII GTNAC 8 cut(s) 174, 311, 653, 833, 1169, 1364, 1540, 1670
MalI GATC 8 cut(s) 69, 483, 622, 888, 1044, 1146, 1503, 1594
MboI GATC 8 cut(s) 67, 481, 620, 886, 1042, 1144, 1501, 1592
MboII GAAGA 8 cut(s) 715, 881, 887, 896, 977, 1102, 1310, 1733
MfeI CAATTG 1 cut(s) 415
MflI RGATCY 4 cut(s) 886, 1144, 1501, 1592
MhlI GDGCHC 3 cut(s) 438, 561, 1078
MlsI TGGCCA 1 cut(s) 1272
MluCI AATT 3 cut(s) 415, 627, 1393
MluNI TGGCCA 1 cut(s) 1272
MlyI GAGTC 1 cut(s) 182
Mox20I TGGCCA 1 cut(s) 1272
Mph1103I ATGCAT 1 cut(s) 1007
MroXI GAANNNNTTC 2 cut(s) 888, 1629
MscI TGGCCA 1 cut(s) 1272
MseI TTAA 5 cut(s) 647, 897, 1103, 1220, 1410
Msp20I TGGCCA 1 cut(s) 1272
MspCI CTTAAG 1 cut(s) 1409
MspI CCGG 2 cut(s) 206, 220
MspR9I CCNGG 1 cut(s) 206
MunI CAATTG 1 cut(s) 415
Mva1269I GAATGC 2 cut(s) 170, 264
MvnI CGCG 1 cut(s) 340
MwoI GCNNNNNNNGC 2 cut(s) 596, 795
NciI CCSGG 1 cut(s) 206
NdeI CATATG 1 cut(s) 308
NdeII GATC 8 cut(s) 67, 481, 620, 886, 1042, 1144, 1501, 1592
NlaIV GGNNCC 3 cut(s) 1503, 1594, 1632
NmeAIII GCCGAG 1 cut(s) 196
NmuCI GTSAC 7 cut(s) 174, 311, 653, 1169, 1364, 1540, 1670
NsiI ATGCAT 1 cut(s) 1007
NspI RCATGY 6 cut(s) 603, 667, 1005, 1133, 1348, 1527
NspV TTCGAA 1 cut(s) 91
PaeI GCATGC 1 cut(s) 1005
PagI TCATGA 4 cut(s) 64, 364, 511, 1063
PceI AGGCCT 1 cut(s) 235
PctI GAATGC 2 cut(s) 170, 264
PdmI GAANNNNTTC 2 cut(s) 888, 1629
PfeI GAWTC 3 cut(s) 131, 773, 1319
PkrI GCNGC 2 cut(s) 83, 263
PleI GAGTC 1 cut(s) 181
PpsI GAGTC 1 cut(s) 181
PsiI TTATAA 1 cut(s) 1341
Psp124BI GAGCTC 1 cut(s) 561
Psp1406I AACGTT 1 cut(s) 840
PspN4I GGNNCC 3 cut(s) 1503, 1594, 1632
PspPI GGNCC 1 cut(s) 741
PstI CTGCAG 1 cut(s) 86
PsuI RGATCY 4 cut(s) 886, 1144, 1501, 1592
RsaI GTAC 5 cut(s) 1051, 1205, 1233, 1278, 1309
RsaNI GTAC 5 cut(s) 1050, 1204, 1232, 1277, 1308
SacI GAGCTC 1 cut(s) 561
SalI GTCGAC 1 cut(s) 323
SaqAI TTAA 5 cut(s) 647, 897, 1103, 1220, 1410
SatI GCNGC 2 cut(s) 82, 262
Sau3AI GATC 8 cut(s) 67, 481, 620, 886, 1042, 1144, 1501, 1592
Sau96I GGNCC 1 cut(s) 741
SchI GAGTC 1 cut(s) 182
ScrFI CCNGG 1 cut(s) 206
SduI GDGCHC 3 cut(s) 438, 561, 1078
SfaNI GCATC 3 cut(s) 577, 1014, 1670
SfcI CTRYAG 1 cut(s) 82
SfuI TTCGAA 1 cut(s) 91
SinI GGWCC 1 cut(s) 741
SmlI CTYRAG 2 cut(s) 554, 1409
SmoI CTYRAG 2 cut(s) 554, 1409
SphI GCATGC 1 cut(s) 1005
Sse9I AATT 3 cut(s) 415, 627, 1393
SseBI AGGCCT 1 cut(s) 235
SsiI CCGC 4 cut(s) 261, 340, 353, 766
SspI AATATT 2 cut(s) 458, 1472
SspMI CTAG 1 cut(s) 1134
SstI GAGCTC 1 cut(s) 561
StuI AGGCCT 1 cut(s) 235
StyD4I CCNGG 1 cut(s) 204
StyI CCWWGG 1 cut(s) 97
TaaI ACNGT 3 cut(s) 677, 1257, 1559
TaiI ACGT 2 cut(s) 324, 843
TasI AATT 3 cut(s) 415, 627, 1393
TatI WGTACW 3 cut(s) 1049, 1231, 1276
TauI GCSGC 1 cut(s) 264
TfiI GAWTC 3 cut(s) 131, 773, 1319
Tru1I TTAA 5 cut(s) 647, 897, 1103, 1220, 1410
Tru9I TTAA 5 cut(s) 647, 897, 1103, 1220, 1410
TscAI CASTG 1 cut(s) 1673
TseFI GTSAC 7 cut(s) 174, 311, 653, 1169, 1364, 1540, 1670
TseI GCWGC 1 cut(s) 81
Tsp45I GTSAC 7 cut(s) 174, 311, 653, 1169, 1364, 1540, 1670
TspGWI ACGGA 3 cut(s) 882, 1234, 1508
TspRI CASTG 1 cut(s) 1673
Vha464I CTTAAG 1 cut(s) 1409
VneI GTGCAC 1 cut(s) 1074
VpaK11BI GGWCC 1 cut(s) 741
XapI RAATTY 1 cut(s) 1393
XceI RCATGY 6 cut(s) 603, 667, 1005, 1133, 1348, 1527
XmiI GTMKAC 1 cut(s) 324
XmnI GAANNNNTTC 2 cut(s) 888, 1629
XspI CTAG 1 cut(s) 1134
Zsp2I ATGCAT 1 cut(s) 1007
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.