Prupe.7G074600_v2.0.a1

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000226
Physical Location & Seq
Forward (+)
11186665 .. 11189663
2999 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G074600.1

Sequence Viewer

Length: 1764 bp
ATGGCTCTGAGTCCGATTAATCCAGGGAGAAGGATTGATCAGAATCAACATTTGAATCACGAGCATCCCATGATGGAAGTGCAGAGGAAGAATGATGGTCAACTTATTTTCTGCGATGGGTGCGGTGACCCAGTGCTTGGGCCTAGCTACACTTGCAACATTTGTTACGAACAGCGTAGAAGTAGCTTCGATCTCCATAAATCATGCGCCGAGCTACCGGGTGAGATCCACCACCCGATCCACCGCAAGCACCCACTTACTCTTGACACAAGCGACAGGGAAAAGAGTTGCAGTGCATGTCATCAAGATTGCATCTCGAGGTTCAGTTACAGTTGTTTCCAATGTGAGTTCAACATTGACCTCCAATGTGCTTCCAATTGGCGCAACATTCTTGACTTTCATGACCACAAATTCACCCTTCATAGGAAGCCAGCGAAATTAACTTGTGAAGCCTGCGGCGAAGAAAGTGTTAGTACTAATATTTACAGTACTAGATTTATTTACAGTAAATATGGCACCGCCATGTACCTCTGCAGCATCTGCCAGCTCCTGGTCCATGGATGTTGTTCTAGGTTACCAACCCACATCAAAACGGCCCAGCACCAACACCGCCTAAAGCTCACCTGGTCGTTTGAAGATACTTTCCCGAAAATCCAAAATTTCTGTGACCTCTGTTATAGAAACATGGACAAAAGCCGCGCAGTTTATTATTGTGAACATGAATATTGCAGTTATGTCGCCCACAATGACTGCGCAACACGACGTTATGAGGCAGTTGAAGATAGTGCTGCTGCTGATGATGATGATAGAATAATCAGCAACCAAATTGAGTTGCAAATCAATCACTTCAGCCATCCACATGTCTTAGCCCTCATCAATAGTGATCATCAAGATAATGGTGGTGATGATGATGATGATGATAGAATAATCACTTGTAATGGCTGCATGCGACCCATCACCAAAGTGGATGCCTTTTATAGCTGTACAAAACAAGAGTCGTCGTGCTCTTTCTTTCTACATACAGCTTGTGCACAGTCACCTAAAAAGATGCATTTGGCAACTATCATTGGCCAGGACTTGGAACTCCATCCAAGGACTCATTCGATTGGTGGGGTGTTCAAGTGTCTTCTTTGTTATACGTTTGGCCAAGGCTTCGTATACCTTTATGAGATTAATTCAATTTTCGGCATTGACCTTCAGTGCGCTATTCTATGGAAGCAGAAGTCTCTTAAACATGAGGCTCATTTTCACACCCTCCAGTTTAACAAAAACAATGAAAGCACTTATAAATGTAGGGGTTGTGGCACTTCTAAAATTTTGCATTGGTTCAGTTGTAGGAGATGCGACTTCCATCTCTGTTTTTCATGTGTTAAATTACCACCTACAGCAAGGCACAAGTACGACAACCATCCTCTCAAGCTCACCTATAACAGTGTTGAAAACGAGTTAGATGAATATTATTGTGAAATATGCGAAGGCAAACGAGATCCCGGACTCTGGTTCTACTCCTGCTCGGATTGTGACTTCGATTGTCATCCTCATTGCATTCTCGGGAGGTATCCGCAAGTCAAGTTAGGAGATAGTTACAAGCATCCGACTCACCCACACCTTGTCACCCTTGTTGACAAGAGAAAGAGTGAAATTCCTTCCGATAAGAGAGAGCGGATTCTTCCTTGTAAGAAGTGTAGTCAACCTTGCGAACGATTGGTGTTTGAATGTTCTAAGTGTAAAATAAATTTCCACATAAAATGTTATATTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

588

Amino Acids

68.02

Weight (kDa)

6.95

Isoelectric Point (pI)

48.56

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1287
Acc16I TGCGCA 1 cut(s) 754
AccB1I GGYRCC 1 cut(s) 515
AccB7I CCANNNNNTGG 3 cut(s) 137, 550, 1078
AccBSI CCGCTC 1 cut(s) 1663
AccI GTMKAC 1 cut(s) 1158
AccII CGCG 1 cut(s) 699
AciI CCGC 8 cut(s) 123, 244, 456, 519, 610, 697, 1562, 1663
AclWI GGATC 3 cut(s) 220, 232, 1481
AcoI YGGCCR 2 cut(s) 1069, 1144
AcsI RAATTY 5 cut(s) 410, 658, 1314, 1641, 1735
AcuI CTGAAG 2 cut(s) 832, 1181
AfaI GTAC 5 cut(s) 475, 490, 527, 985, 1400
AfiI CCNNNNNNNGG 5 cut(s) 137, 423, 550, 1078, 1497
AflIII ACRYGT 1 cut(s) 859
AgsI TTSAA 8 cut(s) 55, 352, 635, 779, 1120, 1179, 1439, 1715
AjnI CCWGG 4 cut(s) 22, 549, 623, 1071
AjuI GAANNNNNNNTTGG 2 cut(s) 1084, 1116
AleI CACNNNNGTG 1 cut(s) 962
AluBI AGCT 8 cut(s) 147, 186, 214, 547, 619, 981, 1025, 1420
AluI AGCT 8 cut(s) 147, 186, 214, 547, 619, 981, 1025, 1420
Alw21I GWGCWC 2 cut(s) 1007, 1033
Alw26I GTCTC 1 cut(s) 1230
Alw44I GTGCAC 1 cut(s) 1029
AlwI GGATC 3 cut(s) 220, 232, 1481
AlwNI CAGNNNCTG 2 cut(s) 540, 550
Ama87I CYCGRG 2 cut(s) 316, 1550
AoxI GGCC 4 cut(s) 140, 594, 1069, 1144
ApaLI GTGCAC 1 cut(s) 1029
ApeKI GCWGC 4 cut(s) 534, 788, 791, 942
ApoI RAATTY 5 cut(s) 410, 658, 1314, 1641, 1735
ArsI GACNNNNNNTTYG 2 cut(s) 980, 1012
AseI ATTAAT 2 cut(s) 18, 1173
AspLEI GCGC 5 cut(s) 209, 384, 701, 755, 1205
AspS9I GGNCC 3 cut(s) 140, 553, 595
AsuC2I CCSGG 2 cut(s) 219, 1491
AvaI CYCGRG 2 cut(s) 316, 1550
AvaII GGWCC 1 cut(s) 553
BaeGI GKGCMC 1 cut(s) 1033
BalI TGGCCA 2 cut(s) 1071, 1146
BanI GGYRCC 1 cut(s) 515
BauI CACGAG 1 cut(s) 59
BbsI GAAGAC 1 cut(s) 1118
Bbv12I GWGCWC 2 cut(s) 1007, 1033
BbvI GCAGC 4 cut(s) 546, 775, 778, 929
BccI CCATC 8 cut(s) 67, 89, 110, 861, 962, 1095, 1359, 1416
BceAI ACGGC 1 cut(s) 609
BcgI CGANNNNNNTGC 2 cut(s) 718, 752
BciT130I CCWGG 4 cut(s) 24, 551, 625, 1073
BciVI GTATCC 1 cut(s) 1569
BclI TGATCA 2 cut(s) 37, 883
BcnI CCSGG 2 cut(s) 219, 1491
BcoDI GTCTC 1 cut(s) 1230
BfaI CTAG 3 cut(s) 144, 492, 570
BfmI CTRYAG 2 cut(s) 532, 1383
BfuI GTATCC 1 cut(s) 1569
BisI GCNGC 6 cut(s) 457, 535, 697, 789, 792, 943
BlsI GCNGC 6 cut(s) 458, 536, 698, 790, 793, 944
BmcAI AGTACT 2 cut(s) 475, 490
Bme1390I CCNGG 6 cut(s) 24, 219, 551, 625, 1073, 1491
Bme18I GGWCC 1 cut(s) 553
BmeT110I CYCGRG 2 cut(s) 316, 1550
BmgT120I GGNCC 3 cut(s) 140, 553, 595
BmiI GGNNCC 1 cut(s) 517
BmrFI CCNGG 6 cut(s) 24, 219, 551, 625, 1073, 1491
BmrI ACTGGG 1 cut(s) 125
BmsI GCATC 7 cut(s) 73, 321, 546, 958, 1038, 1331, 1600
BmuI ACTGGG 1 cut(s) 125
BpiI GAAGAC 1 cut(s) 1118
BpmI CTGGAG 1 cut(s) 1241
BpuEI CTTGAG 1 cut(s) 1400
BpuMI CCSGG 2 cut(s) 219, 1491
BsaBI GATNNNNATC 2 cut(s) 42, 1533
BsaJI CCNNGG 4 cut(s) 23, 556, 1091, 1147
Bsc4I CCNNNNNNNGG 5 cut(s) 137, 423, 550, 1078, 1497
Bse1I ACTGG 2 cut(s) 131, 1258
Bse3DI GCAATG 1 cut(s) 1540
Bse8I GATNNNNATC 2 cut(s) 42, 1533
BseBI CCWGG 4 cut(s) 24, 551, 625, 1073
BseDI CCNNGG 4 cut(s) 23, 556, 1091, 1147
BseGI GGATG 8 cut(s) 64, 566, 853, 973, 1087, 1408, 1534, 1591
BseJI GATNNNNATC 2 cut(s) 42, 1533
BseLI CCNNNNNNNGG 5 cut(s) 137, 423, 550, 1078, 1497
BseMI GCAATG 1 cut(s) 1540
BseNI ACTGG 2 cut(s) 131, 1258
BseSI GKGCMC 1 cut(s) 1033
BseXI GCAGC 4 cut(s) 546, 775, 778, 929
BseYI CCCAGC 1 cut(s) 597
BsgI GTGCAG 1 cut(s) 101
Bsh1236I CGCG 1 cut(s) 699
BshFI GGCC 4 cut(s) 142, 596, 1071, 1146
BshNI GGYRCC 1 cut(s) 515
BsiHKAI GWGCWC 2 cut(s) 1007, 1033
BsiHKCI CYCGRG 2 cut(s) 316, 1550
BsiSI CCGG 2 cut(s) 218, 1491
BslI CCNNNNNNNGG 5 cut(s) 137, 423, 550, 1078, 1497
BsmAI GTCTC 1 cut(s) 1230
BsmI GAATGC 1 cut(s) 1545
BsnI GGCC 4 cut(s) 142, 596, 1071, 1146
BsoBI CYCGRG 2 cut(s) 316, 1550
Bsp1286I GDGCHC 2 cut(s) 1007, 1033
Bsp1407I TGTACA 1 cut(s) 983
Bsp143I GATC 6 cut(s) 37, 190, 225, 237, 883, 1486
Bsp19I CCATGG 1 cut(s) 556
BspACI CCGC 8 cut(s) 123, 244, 456, 519, 610, 697, 1562, 1663
BspANI GGCC 4 cut(s) 142, 596, 1071, 1146
BspFNI CGCG 1 cut(s) 699
BspHI TCATGA 1 cut(s) 400
BspLI GGNNCC 1 cut(s) 517
BspMAI CTGCAG 1 cut(s) 536
BspPI GGATC 3 cut(s) 220, 232, 1481
BspT107I GGYRCC 1 cut(s) 515
BsrBI CCGCTC 1 cut(s) 1663
BsrDI GCAATG 1 cut(s) 1540
BsrGI TGTACA 1 cut(s) 983
BsrI ACTGG 2 cut(s) 131, 1258
BssECI CCNNGG 4 cut(s) 23, 556, 1091, 1147
BssMI GATC 6 cut(s) 37, 190, 225, 237, 883, 1486
BssNAI GTATAC 1 cut(s) 1159
BssSI CACGAG 1 cut(s) 59
BssT1I CCWWGG 3 cut(s) 556, 1091, 1147
Bst1107I GTATAC 1 cut(s) 1159
Bst2BI CACGAG 1 cut(s) 59
Bst2UI CCWGG 4 cut(s) 24, 551, 625, 1073
Bst4CI ACNGT 5 cut(s) 332, 488, 506, 1035, 1433
BstAPI GCANNNNNTGC 1 cut(s) 540
BstAUI TGTACA 1 cut(s) 983
BstC8I GCNNGC 5 cut(s) 248, 432, 454, 545, 947
BstDEI CTNAG 3 cut(s) 8, 865, 1722
BstDSI CCRYGG 1 cut(s) 556
BstEII GGTNACC 2 cut(s) 125, 573
BstF5I GGATG 8 cut(s) 64, 566, 853, 973, 1087, 1408, 1534, 1591
BstFNI CGCG 1 cut(s) 699
BstHHI GCGC 5 cut(s) 209, 384, 701, 755, 1205
BstKTI GATC 6 cut(s) 40, 193, 228, 240, 886, 1489
BstMAI GTCTC 1 cut(s) 1230
BstMBI GATC 6 cut(s) 37, 190, 225, 237, 883, 1486
BstMWI GCNNNNNNNGC 3 cut(s) 120, 153, 540
BstNI CCWGG 4 cut(s) 24, 551, 625, 1073
BstNSI RCATGY 3 cut(s) 300, 863, 949
BstPI GGTNACC 2 cut(s) 125, 573
BstSCI CCNGG 6 cut(s) 22, 217, 549, 623, 1071, 1489
BstSFI CTRYAG 2 cut(s) 532, 1383
BstSLI GKGCMC 1 cut(s) 1033
BstUI CGCG 1 cut(s) 699
BstV1I GCAGC 4 cut(s) 546, 775, 778, 929
BstV2I GAAGAC 1 cut(s) 1118
BstX2I RGATCY 2 cut(s) 225, 1486
BstYI RGATCY 2 cut(s) 225, 1486
BstZ17I GTATAC 1 cut(s) 1159
BsuI GTATCC 1 cut(s) 1569
BsuRI GGCC 4 cut(s) 142, 596, 1071, 1146
BtgI CCRYGG 1 cut(s) 556
BtgZI GCGATG 1 cut(s) 129
BtsCI GGATG 8 cut(s) 64, 566, 853, 973, 1087, 1408, 1534, 1591
BtsI GCAGTG 1 cut(s) 298
BtsIMutI CAGTG 4 cut(s) 138, 298, 1205, 1438
Cac8I GCNNGC 5 cut(s) 248, 432, 454, 545, 947
CaiI CAGNNNCTG 2 cut(s) 540, 550
CciI TCATGA 1 cut(s) 400
CfoI GCGC 5 cut(s) 209, 384, 701, 755, 1205
Cfr13I GGNCC 3 cut(s) 140, 553, 595
CsiI ACCWGGT 1 cut(s) 623
Csp6I GTAC 5 cut(s) 474, 489, 526, 984, 1399
CviQI GTAC 5 cut(s) 474, 489, 526, 984, 1399
DdeI CTNAG 3 cut(s) 8, 865, 1722
DpnI GATC 6 cut(s) 39, 192, 227, 239, 885, 1488
DpnII GATC 6 cut(s) 37, 190, 225, 237, 883, 1486
EaeI YGGCCR 2 cut(s) 1069, 1144
Eco130I CCWWGG 3 cut(s) 556, 1091, 1147
Eco47I GGWCC 1 cut(s) 553
Eco57I CTGAAG 2 cut(s) 832, 1181
Eco88I CYCGRG 2 cut(s) 316, 1550
Eco91I GGTNACC 2 cut(s) 125, 573
EcoO65I GGTNACC 2 cut(s) 125, 573
EcoRII CCWGG 4 cut(s) 22, 549, 623, 1071
EcoT14I CCWWGG 3 cut(s) 556, 1091, 1147
EcoT22I ATGCAT 1 cut(s) 1053
ErhI CCWWGG 3 cut(s) 556, 1091, 1147
FbaI TGATCA 2 cut(s) 37, 883
FblI GTMKAC 1 cut(s) 1158
Fnu4HI GCNGC 6 cut(s) 457, 535, 697, 789, 792, 943
FokI GGATG 8 cut(s) 51, 573, 840, 980, 1074, 1395, 1521, 1578
Fsp4HI GCNGC 6 cut(s) 457, 535, 697, 789, 792, 943
FspBI CTAG 3 cut(s) 144, 492, 570
FspI TGCGCA 1 cut(s) 754
GlaI GCGC 5 cut(s) 208, 383, 700, 754, 1204
GluI GCNGC 6 cut(s) 457, 535, 697, 789, 792, 943
GsaI CCCAGC 1 cut(s) 601
GsuI CTGGAG 1 cut(s) 1241
HaeIII GGCC 4 cut(s) 142, 596, 1071, 1146
HapII CCGG 2 cut(s) 218, 1491
HhaI GCGC 5 cut(s) 209, 384, 701, 755, 1205
Hin6I GCGC 5 cut(s) 207, 382, 699, 753, 1203
HinP1I GCGC 5 cut(s) 207, 382, 699, 753, 1203
HincII GTYRAC 3 cut(s) 101, 1624, 1691
HindII GTYRAC 3 cut(s) 101, 1624, 1691
HinfI GANTC 8 cut(s) 10, 43, 55, 995, 1096, 1494, 1597, 1666
HpaII CCGG 2 cut(s) 218, 1491
Hpy166II GTNNAC 6 cut(s) 101, 716, 1031, 1159, 1624, 1691
Hpy188I TCNGA 6 cut(s) 9, 15, 42, 1516, 1596, 1651
Hpy188III TCNNGA 9 cut(s) 59, 263, 305, 316, 392, 401, 646, 890, 1552
Hpy8I GTNNAC 6 cut(s) 101, 716, 1031, 1159, 1624, 1691
Hpy99I CGWCG 2 cut(s) 765, 1003
HpyAV CCTTC 5 cut(s) 24, 428, 1205, 1469, 1656
HpyCH4III ACNGT 5 cut(s) 332, 488, 506, 1035, 1433
HpyCH4IV ACGT 2 cut(s) 763, 1139
HpyF10VI GCNNNNNNNGC 3 cut(s) 120, 153, 540
HpyF3I CTNAG 3 cut(s) 8, 865, 1722
HpySE526I ACGT 2 cut(s) 763, 1139
HspAI GCGC 5 cut(s) 207, 382, 699, 753, 1203
Ksp22I TGATCA 2 cut(s) 37, 883
Kzo9I GATC 6 cut(s) 37, 190, 225, 237, 883, 1486
LmnI GCTCC 1 cut(s) 552
Lsp1109I GCAGC 4 cut(s) 546, 775, 778, 929
LweI GCATC 7 cut(s) 73, 321, 546, 958, 1038, 1331, 1600
MabI ACCWGGT 1 cut(s) 623
MaeI CTAG 3 cut(s) 144, 492, 570
MaeII ACGT 2 cut(s) 763, 1139
MaeIII GTNAC 9 cut(s) 125, 164, 326, 573, 665, 1035, 1520, 1583, 1612
MalI GATC 6 cut(s) 39, 192, 227, 239, 885, 1488
MbiI CCGCTC 1 cut(s) 1663
MboI GATC 6 cut(s) 37, 190, 225, 237, 883, 1486
MboII GAAGA 6 cut(s) 100, 473, 647, 791, 1118, 1661
MfeI CAATTG 1 cut(s) 376
MflI RGATCY 2 cut(s) 225, 1486
MhlI GDGCHC 2 cut(s) 1007, 1033
MlsI TGGCCA 2 cut(s) 1071, 1146
MluNI TGGCCA 2 cut(s) 1071, 1146
MlyI GAGTC 5 cut(s) 19, 1004, 1090, 1488, 1591
MmeI TCCRAC 1 cut(s) 1619
Mox20I TGGCCA 2 cut(s) 1071, 1146
Mph1103I ATGCAT 1 cut(s) 1053
MscI TGGCCA 2 cut(s) 1071, 1146
MseI TTAA 6 cut(s) 18, 440, 1173, 1230, 1263, 1371
MslI CAYNNNNRTG 3 cut(s) 521, 858, 962
Msp20I TGGCCA 2 cut(s) 1071, 1146
MspI CCGG 2 cut(s) 218, 1491
MspR9I CCNGG 6 cut(s) 24, 219, 551, 625, 1073, 1491
MunI CAATTG 1 cut(s) 376
Mva1269I GAATGC 1 cut(s) 1545
MvaI CCWGG 4 cut(s) 24, 551, 625, 1073
MvnI CGCG 1 cut(s) 699
MwoI GCNNNNNNNGC 3 cut(s) 120, 153, 540
NciI CCSGG 2 cut(s) 219, 1491
NcoI CCATGG 1 cut(s) 556
NdeII GATC 6 cut(s) 37, 190, 225, 237, 883, 1486
NlaIV GGNNCC 1 cut(s) 517
NmeAIII GCCGAG 1 cut(s) 235
NmuCI GTSAC 5 cut(s) 125, 665, 1035, 1520, 1612
NsbI TGCGCA 1 cut(s) 754
NsiI ATGCAT 1 cut(s) 1053
NspI RCATGY 3 cut(s) 300, 863, 949
OliI CACNNNNGTG 1 cut(s) 962
PaeI GCATGC 1 cut(s) 949
PaeR7I CTCGAG 1 cut(s) 316
PagI TCATGA 1 cut(s) 400
PciI ACATGT 1 cut(s) 859
PctI GAATGC 1 cut(s) 1545
PfeI GAWTC 3 cut(s) 43, 55, 1666
PflMI CCANNNNNTGG 3 cut(s) 137, 550, 1078
PfoI TCCNGGA 1 cut(s) 1489
PkrI GCNGC 6 cut(s) 458, 536, 698, 790, 793, 944
PleI GAGTC 5 cut(s) 18, 1003, 1090, 1488, 1591
PpsI GAGTC 5 cut(s) 18, 1003, 1090, 1488, 1591
PscI ACATGT 1 cut(s) 859
PshBI ATTAAT 2 cut(s) 18, 1173
PsiI TTATAA 1 cut(s) 1287
Psp6I CCWGG 4 cut(s) 22, 549, 623, 1071
PspEI GGTNACC 2 cut(s) 125, 573
PspFI CCCAGC 1 cut(s) 597
PspGI CCWGG 4 cut(s) 22, 549, 623, 1071
PspN4I GGNNCC 1 cut(s) 517
PspPI GGNCC 3 cut(s) 140, 553, 595
PstI CTGCAG 1 cut(s) 536
PstNI CAGNNNCTG 2 cut(s) 540, 550
PsuI RGATCY 2 cut(s) 225, 1486
RsaI GTAC 5 cut(s) 475, 490, 527, 985, 1400
RsaNI GTAC 5 cut(s) 474, 489, 526, 984, 1399
RseI CAYNNNNRTG 3 cut(s) 521, 858, 962
SaqAI TTAA 6 cut(s) 18, 440, 1173, 1230, 1263, 1371
SatI GCNGC 6 cut(s) 457, 535, 697, 789, 792, 943
Sau3AI GATC 6 cut(s) 37, 190, 225, 237, 883, 1486
Sau96I GGNCC 3 cut(s) 140, 553, 595
ScaI AGTACT 2 cut(s) 475, 490
SchI GAGTC 5 cut(s) 19, 1004, 1090, 1488, 1591
ScrFI CCNGG 6 cut(s) 24, 219, 551, 625, 1073, 1491
SduI GDGCHC 2 cut(s) 1007, 1033
SexAI ACCWGGT 1 cut(s) 623
SfaNI GCATC 7 cut(s) 73, 321, 546, 958, 1038, 1331, 1600
SfcI CTRYAG 2 cut(s) 532, 1383
Sfr274I CTCGAG 1 cut(s) 316
SinI GGWCC 1 cut(s) 553
SlaI CTCGAG 1 cut(s) 316
SmiMI CAYNNNNRTG 3 cut(s) 521, 858, 962
SmlI CTYRAG 2 cut(s) 316, 1415
SmoI CTYRAG 2 cut(s) 316, 1415
SphI GCATGC 1 cut(s) 949
SsiI CCGC 8 cut(s) 123, 244, 456, 519, 610, 697, 1562, 1663
SspI AATATT 3 cut(s) 481, 725, 1457
SspMI CTAG 3 cut(s) 144, 492, 570
StyD4I CCNGG 6 cut(s) 22, 217, 549, 623, 1071, 1489
StyI CCWWGG 3 cut(s) 556, 1091, 1147
TaaI ACNGT 5 cut(s) 332, 488, 506, 1035, 1433
TaiI ACGT 2 cut(s) 766, 1142
TaqI TCGA 4 cut(s) 189, 317, 1103, 1527
TatI WGTACW 3 cut(s) 473, 488, 983
TauI GCSGC 2 cut(s) 459, 699
TfiI GAWTC 3 cut(s) 43, 55, 1666
Tru1I TTAA 6 cut(s) 18, 440, 1173, 1230, 1263, 1371
Tru9I TTAA 6 cut(s) 18, 440, 1173, 1230, 1263, 1371
TscAI CASTG 4 cut(s) 138, 298, 1205, 1438
TseFI GTSAC 5 cut(s) 125, 665, 1035, 1520, 1612
TseI GCWGC 4 cut(s) 534, 788, 791, 942
Tsp45I GTSAC 5 cut(s) 125, 665, 1035, 1520, 1612
TspDTI ATGAA 6 cut(s) 389, 410, 735, 1290, 1353, 1467
TspRI CASTG 4 cut(s) 138, 298, 1205, 1438
Van91I CCANNNNNTGG 3 cut(s) 137, 550, 1078
VneI GTGCAC 1 cut(s) 1029
VpaK11BI GGWCC 1 cut(s) 553
VspI ATTAAT 2 cut(s) 18, 1173
XapI RAATTY 5 cut(s) 410, 658, 1314, 1641, 1735
XceI RCATGY 3 cut(s) 300, 863, 949
XcmI CCANNNNNNNNNTGG 1 cut(s) 961
XhoI CTCGAG 1 cut(s) 316
XmiI GTMKAC 1 cut(s) 1158
XspI CTAG 3 cut(s) 144, 492, 570
ZrmI AGTACT 2 cut(s) 475, 490
Zsp2I ATGCAT 1 cut(s) 1053
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.