AT3G27500

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000226
Physical Location & Seq
Reverse (-)
10182730 .. 10185198
2469 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G27500.3

Sequence Viewer

Length: 2079 bp
ATGACTTATGAGTTAGAAGAGTTAGAAGGACACGAGCATCTTGTTTCCCGCGTTAAACATCATGATGGTCTGGAATGCGATGCTTGTGATCGATTGAATGTTGATGGCTATTCATGCAGCGAATGCAAGTTTAATATTCATGTAGCATGTACATTTGTGTTCGATAAACAAGAGATAGTCGACCACCCTTCTCATGATGGACATTCTCTTAAGCTTCTTACAACTGGAGCTCCTGATCACACAGATCCAAAATGTCATCTCTGCGGTAATAACACCAAGCGCCTTCTTTTTCATTGCTCTGTTTGTCAACTCAATTTGGACATTTTTTGCATAGCTGATCACCTATTAGGCCCAGAATATCTGAATATGCCATGGCACCCCCATCCTCTACTATGTTTTGATTTTGGATCTAGAAATTGGTGCGACTTTTGTAACGAGAATTATGAAGGACAAGGTTACCTCTGCTATCGTTGCGGGTTGAGGATTCATGAGAAATGTGTAGTTGAATTACAAGAGATCACTCAACACCCTTCTCATGTCAGGCACCCTCTTAAGCTTCTCACCAGTGGAGCTCCAAATTACACAAACCCAAGATGTCATATATGTGGAGAGGACACTGGAAACTTACTTTATCATTGTGATATTTGTAAGTTCAATTTGGATTTGCAGTGTGCGATAAAAAGCTCTCCACCCGTTGCTCTTTCAAATATGAAGGTCCATGAGCATACACTCACACTCATGCCAAAATTGATCTCCTTCGTTTGTGATGCTTGTGGAACAAAAGGCGATCGTTCTCCTTACATATGTGTACAATGTGATTTCATGACCTTCCATCAAAAGTGTGCTCGTTTACCACGTGTCATTCATGTCAATCACCATGACCACCGAGTTTCCTTCAAGTATCCTCTTGGTCCTGGAGATTGGAGATGTGGAGTTTGTTGGGATGAGATTGATTGGTCATACGGGGCTTACTCATGTTCTCTTTGTTCTCGTTATGCTATTCATTCACTATGTGCAACAAGAGATGACGTGTGGGATGGGGAAGAGCTTGATGGAGTACCTGAAGAAATTGAAGACATCGAGCCATTCAAGAGGAATGATGACAACACAATCGATCATTTCTCTCATCGACATAACCACATGAGCCTCGACAAAGGTGGTGAAGAAAGTAGCTTCTGTAAAGCATGTGCTCATCCCATCGGTTCTTCTTCCTCACTCTACAAGTGTTCAGAATGCAGTTTCATTCTTCATGAAACATGTGCTAATCTTCCGATGAAGAAGCGACATTTTCTGAGCCCACAACCACTGACTCTTAGCTATCATCGCCTTCAACGCCGTTGGGGAGTAGAAATTTGCGAAGCTTGTCAGCAAATTTTTTGCAAAGGATTCATCTACTCGTCGTATTTAGAAGAGAACTTTGACTTACCATGCAGTTCAATTACTGTGCCTTTTATCCATGGAAGTCATGATCATCATTTACTCTACCTCAAACTAGAAAACGGTAACGTGAAGACTTGCCAGGGTTGCGGTATCGATGAAAAAAGAGTCGCCATAGGTTGTACCAAATGCAATTATTTTTTGGATTTCCGCTGTGCCACTCTACCATTAACGGTAACACTTTCCAGGTACGATGATCATCCACTCACTCTTTGTTATGGTGACGAAAAAGCAAGCGGCAAATATTGGTGTGATATTTGTGAAAGAGAGACCAATCCAAAAACTTGGTTCTACACTTGTAACGATTGCGGGGTCACTTTACATGTTTTGTGTGTAGTTGGAGATGTTAGATACGCCAAACCAAAAGCAATGATCGAGTACTATATAGAATTGCTGTCAAACAATAGCTCTTCAAGACCATTTTGCCACAACTGCTATTGTCGCTGCCCAGGCCCCTTCATTCTTAGGATAAGAAAGCAACATGACGCCCATCTTGGTGGAGAATATTACATATTCTTTTGTTCTTATTATTGTTACATAATCACCAAAAGTAAGAAGGAGTACTCCAAAATTAAGTTGAGATGTCCTCCTTGGAGAAGTGGACATCAAAGCCAATTGATGGAGTTGCAAAACGACCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2

Protein Analysis

692

Amino Acids

79.58

Weight (kDa)

6.28

Isoelectric Point (pI)

48.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 10 - 50 1.5e-06 C1 domain
C1_2 PF03107 63 - 111 1.8e-07 C1 domain
C1_2 PF03107 124 - 167 2.9e-06 C1 domain
C1_2 PF03107 177 - 225 1.3e-10 C1 domain
C1_2 PF03107 239 - 282 3.5e-11 C1 domain
C1_2 PF03107 292 - 339 5.6e-09 C1 domain
C1_2 PF03107 374 - 421 6.3e-10 C1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 375, 543
AccB7I CCANNNNNTGG 1 cut(s) 2056
AccI GTMKAC 1 cut(s) 180
AccII CGCG 1 cut(s) 51
AciI CCGC 7 cut(s) 49, 264, 474, 1527, 1588, 1674, 1746
AclWI GGATC 2 cut(s) 239, 415
AcsI RAATTY 2 cut(s) 1350, 1371
AcuI CTGAAG 1 cut(s) 1083
AcvI CACGTG 1 cut(s) 857
AcyI GRCGYC 1 cut(s) 1923
AdeI CACNNNGTG 1 cut(s) 1013
AfaI GTAC 7 cut(s) 151, 810, 1059, 1561, 1628, 1817, 2000
AfiI CCNNNNNNNGG 1 cut(s) 2056
AflII CTTAAG 2 cut(s) 209, 551
AflIII ACRYGT 4 cut(s) 856, 1029, 1256, 1759
AjiI CACGTC 1 cut(s) 1030
AjnI CCWGG 4 cut(s) 913, 1518, 1622, 1885
Alw21I GWGCWC 4 cut(s) 232, 574, 847, 1192
Alw26I GTCTC 1 cut(s) 1700
AlwI GGATC 2 cut(s) 239, 415
AoxI GGCC 2 cut(s) 349, 1888
ApeKI GCWGC 2 cut(s) 117, 1881
ApoI RAATTY 2 cut(s) 1350, 1371
AspLEI GCGC 1 cut(s) 282
AspS9I GGNCC 4 cut(s) 350, 715, 911, 1889
AsuHPI GGTGA 6 cut(s) 332, 553, 866, 1172, 1670, 1972
AvaII GGWCC 2 cut(s) 715, 911
BanI GGYRCC 2 cut(s) 375, 543
BanII GRGCYC 3 cut(s) 232, 574, 1298
BauI CACGAG 1 cut(s) 32
BbrPI CACGTG 1 cut(s) 857
BbsI GAAGAC 2 cut(s) 1080, 1517
Bbv12I GWGCWC 4 cut(s) 232, 574, 847, 1192
BbvI GCAGC 2 cut(s) 129, 1868
BceAI ACGGC 1 cut(s) 1320
BciT130I CCWGG 4 cut(s) 915, 1520, 1624, 1887
BciVI GTATCC 1 cut(s) 912
BclI TGATCA 4 cut(s) 235, 337, 1468, 1633
BcoDI GTCTC 1 cut(s) 1700
BfaI CTAG 2 cut(s) 411, 1493
BfoI RGCGCY 1 cut(s) 283
BfrI CTTAAG 2 cut(s) 209, 551
BfuI GTATCC 1 cut(s) 912
BisI GCNGC 3 cut(s) 118, 1675, 1882
BlsI GCNGC 3 cut(s) 119, 1676, 1883
BmcAI AGTACT 2 cut(s) 1817, 2000
Bme1390I CCNGG 4 cut(s) 915, 1520, 1624, 1887
Bme18I GGWCC 2 cut(s) 715, 911
BmgBI CACGTC 1 cut(s) 1030
BmgT120I GGNCC 4 cut(s) 350, 715, 911, 1889
BmiI GGNNCC 3 cut(s) 377, 545, 1891
BmrFI CCNGG 4 cut(s) 915, 1520, 1624, 1887
BmsI GCATC 3 cut(s) 46, 70, 757
BpiI GAAGAC 2 cut(s) 1080, 1517
BplI GAGNNNNNCTC 2 cut(s) 2008, 2040
BpmI CTGGAG 2 cut(s) 246, 936
Bsa29I ATCGAT 3 cut(s) 91, 1113, 1533
BsaAI YACGTR 1 cut(s) 857
BsaBI GATNNNNATC 1 cut(s) 1635
BsaHI GRCGYC 1 cut(s) 1923
BsaI GGTCTC 1 cut(s) 1700
BsaJI CCNNGG 5 cut(s) 371, 1456, 1519, 1885, 2027
BsaXI ACNNNNNCTCC 2 cut(s) 214, 244
Bsc4I CCNNNNNNNGG 1 cut(s) 2056
Bse1I ACTGG 4 cut(s) 229, 564, 622, 2074
Bse3DI GCAATG 2 cut(s) 292, 1812
Bse8I GATNNNNATC 1 cut(s) 1635
BseBI CCWGG 4 cut(s) 915, 1520, 1624, 1887
BseCI ATCGAT 3 cut(s) 91, 1113, 1533
BseDI CCNNGG 5 cut(s) 371, 1456, 1519, 1885, 2027
BseGI GGATG 5 cut(s) 382, 949, 1042, 1192, 1636
BseJI GATNNNNATC 1 cut(s) 1635
BseLI CCNNNNNNNGG 1 cut(s) 2056
BseMI GCAATG 2 cut(s) 292, 1812
BseMII CTCAG 1 cut(s) 1283
BseNI ACTGG 4 cut(s) 229, 564, 622, 2074
BseXI GCAGC 2 cut(s) 129, 1868
Bsh1236I CGCG 1 cut(s) 51
Bsh1285I CGRYCG 1 cut(s) 790
BshFI GGCC 2 cut(s) 351, 1890
BshNI GGYRCC 2 cut(s) 375, 543
BshVI ATCGAT 3 cut(s) 91, 1113, 1533
BsiEI CGRYCG 1 cut(s) 790
BsiHKAI GWGCWC 4 cut(s) 232, 574, 847, 1192
BslI CCNNNNNNNGG 1 cut(s) 2056
BsmAI GTCTC 1 cut(s) 1700
BsmI GAATGC 3 cut(s) 80, 128, 1238
BsnI GGCC 2 cut(s) 351, 1890
Bso31I GGTCTC 1 cut(s) 1700
Bsp1286I GDGCHC 5 cut(s) 232, 574, 847, 1192, 1298
Bsp1407I TGTACA 2 cut(s) 149, 808
Bsp19I CCATGG 2 cut(s) 371, 1456
BspACI CCGC 7 cut(s) 49, 264, 474, 1527, 1588, 1674, 1746
BspANI GGCC 2 cut(s) 351, 1890
BspCNI CTCAG 1 cut(s) 1284
BspDI ATCGAT 3 cut(s) 91, 1113, 1533
BspFNI CGCG 1 cut(s) 51
BspHI TCATGA 6 cut(s) 61, 193, 487, 822, 1249, 1465
BspLI GGNNCC 3 cut(s) 377, 545, 1891
BspPI GGATC 2 cut(s) 239, 415
BspQI GCTCTTC 2 cut(s) 1038, 1852
BspT107I GGYRCC 2 cut(s) 375, 543
BspTI CTTAAG 2 cut(s) 209, 551
BspTNI GGTCTC 1 cut(s) 1700
BsrDI GCAATG 2 cut(s) 292, 1812
BsrGI TGTACA 2 cut(s) 149, 808
BsrI ACTGG 4 cut(s) 229, 564, 622, 2074
BssECI CCNNGG 5 cut(s) 371, 1456, 1519, 1885, 2027
BssNI GRCGYC 1 cut(s) 1923
BssSI CACGAG 1 cut(s) 32
BssT1I CCWWGG 3 cut(s) 371, 1456, 2027
Bst2BI CACGAG 1 cut(s) 32
Bst2UI CCWGG 4 cut(s) 915, 1520, 1624, 1887
Bst4CI ACNGT 3 cut(s) 1444, 1502, 1612
Bst6I CTCTTC 4 cut(s) 12, 1038, 1404, 1852
BstACI GRCGYC 1 cut(s) 1923
BstAFI CTTAAG 2 cut(s) 209, 551
BstAPI GCANNNNNTGC 1 cut(s) 123
BstAUI TGTACA 2 cut(s) 149, 808
BstBAI YACGTR 1 cut(s) 857
BstC8I GCNNGC 1 cut(s) 1672
BstDEI CTNAG 3 cut(s) 1292, 1313, 1901
BstDSI CCRYGG 2 cut(s) 371, 1456
BstEII GGTNACC 1 cut(s) 455
BstF5I GGATG 5 cut(s) 382, 949, 1042, 1192, 1636
BstFNI CGCG 1 cut(s) 51
BstH2I RGCGCY 1 cut(s) 283
BstHHI GCGC 1 cut(s) 282
BstMAI GTCTC 1 cut(s) 1700
BstMCI CGRYCG 1 cut(s) 790
BstMWI GCNNNNNNNGC 9 cut(s) 114, 123, 471, 1323, 1332, 1524, 1869, 1878, 1887
BstNI CCWGG 4 cut(s) 915, 1520, 1624, 1887
BstNSI RCATGY 4 cut(s) 150, 1188, 1260, 1763
BstPI GGTNACC 1 cut(s) 455
BstSCI CCNGG 4 cut(s) 913, 1518, 1622, 1885
BstUI CGCG 1 cut(s) 51
BstV1I GCAGC 2 cut(s) 129, 1868
BstV2I GAAGAC 2 cut(s) 1080, 1517
BstX2I RGATCY 2 cut(s) 244, 407
BstXI CCANNNNNNTGG 2 cut(s) 1722, 1934
BstYI RGATCY 2 cut(s) 244, 407
Bsu15I ATCGAT 3 cut(s) 91, 1113, 1533
BsuI GTATCC 1 cut(s) 912
BsuRI GGCC 2 cut(s) 351, 1890
BsuTUI ATCGAT 3 cut(s) 91, 1113, 1533
BtgI CCRYGG 2 cut(s) 371, 1456
BtgZI GCGATG 2 cut(s) 93, 1307
BtrI CACGTC 1 cut(s) 1030
BtsCI GGATG 5 cut(s) 382, 949, 1042, 1192, 1636
BtsI GCAGTG 1 cut(s) 674
BtsIMutI CAGTG 4 cut(s) 571, 615, 674, 1304
Cac8I GCNNGC 1 cut(s) 1672
CciI TCATGA 6 cut(s) 61, 193, 487, 822, 1249, 1465
CfoI GCGC 1 cut(s) 282
Cfr13I GGNCC 4 cut(s) 350, 715, 911, 1889
ClaI ATCGAT 3 cut(s) 91, 1113, 1533
CseI GACGC 1 cut(s) 1931
Csp6I GTAC 7 cut(s) 150, 809, 1058, 1560, 1627, 1816, 1999
CviQI GTAC 7 cut(s) 150, 809, 1058, 1560, 1627, 1816, 1999
DdeI CTNAG 3 cut(s) 1292, 1313, 1901
DraIII CACNNNGTG 1 cut(s) 1013
Eam1104I CTCTTC 4 cut(s) 12, 1038, 1404, 1852
EarI CTCTTC 4 cut(s) 12, 1038, 1404, 1852
Ecl136II GAGCTC 2 cut(s) 230, 572
Eco130I CCWWGG 3 cut(s) 371, 1456, 2027
Eco24I GRGCYC 3 cut(s) 232, 574, 1298
Eco31I GGTCTC 1 cut(s) 1700
Eco47I GGWCC 2 cut(s) 715, 911
Eco53kI GAGCTC 2 cut(s) 230, 572
Eco57I CTGAAG 1 cut(s) 1083
Eco72I CACGTG 1 cut(s) 857
Eco91I GGTNACC 1 cut(s) 455
EcoICRI GAGCTC 2 cut(s) 230, 572
EcoO109I RGGNCCY 1 cut(s) 1889
EcoO65I GGTNACC 1 cut(s) 455
EcoRII CCWGG 4 cut(s) 913, 1518, 1622, 1885
EcoT14I CCWWGG 3 cut(s) 371, 1456, 2027
EcoT38I GRGCYC 3 cut(s) 232, 574, 1298
ErhI CCWWGG 3 cut(s) 371, 1456, 2027
FauI CCCGC 3 cut(s) 56, 467, 1739
FauNDI CATATG 1 cut(s) 803
FbaI TGATCA 4 cut(s) 235, 337, 1468, 1633
FblI GTMKAC 1 cut(s) 180
Fnu4HI GCNGC 3 cut(s) 118, 1675, 1882
FokI GGATG 5 cut(s) 369, 956, 1049, 1179, 1623
FriOI GRGCYC 3 cut(s) 232, 574, 1298
Fsp4HI GCNGC 3 cut(s) 118, 1675, 1882
FspBI CTAG 2 cut(s) 411, 1493
GlaI GCGC 1 cut(s) 281
GluI GCNGC 3 cut(s) 118, 1675, 1882
GsuI CTGGAG 2 cut(s) 246, 936
HaeII RGCGCY 1 cut(s) 283
HaeIII GGCC 2 cut(s) 351, 1890
HgaI GACGC 1 cut(s) 1931
HhaI GCGC 1 cut(s) 282
Hin1I GRCGYC 1 cut(s) 1923
Hin6I GCGC 1 cut(s) 280
HinP1I GCGC 1 cut(s) 280
HincII GTYRAC 2 cut(s) 181, 308
HindII GTYRAC 2 cut(s) 181, 308
HindIII AAGCTT 3 cut(s) 212, 554, 1359
HinfI GANTC 4 cut(s) 484, 1309, 1386, 1545
HphI GGTGA 6 cut(s) 332, 553, 866, 1172, 1670, 1972
Hpy166II GTNNAC 5 cut(s) 181, 308, 809, 851, 2039
Hpy188I TCNGA 4 cut(s) 363, 1231, 1272, 1293
Hpy8I GTNNAC 5 cut(s) 181, 308, 809, 851, 2039
Hpy99I CGWCG 1 cut(s) 1402
HpyCH4III ACNGT 3 cut(s) 1444, 1502, 1612
HpyCH4IV ACGT 3 cut(s) 856, 1029, 1506
HpyF10VI GCNNNNNNNGC 9 cut(s) 114, 123, 471, 1323, 1332, 1524, 1869, 1878, 1887
HpyF3I CTNAG 3 cut(s) 1292, 1313, 1901
HpySE526I ACGT 3 cut(s) 856, 1029, 1506
Hsp92I GRCGYC 1 cut(s) 1923
HspAI GCGC 1 cut(s) 280
Ksp22I TGATCA 4 cut(s) 235, 337, 1468, 1633
LguI GCTCTTC 2 cut(s) 1038, 1852
LmnI GCTCC 4 cut(s) 227, 235, 569, 577
Lsp1109I GCAGC 2 cut(s) 129, 1868
LweI GCATC 3 cut(s) 46, 70, 757
MaeI CTAG 2 cut(s) 411, 1493
MaeII ACGT 3 cut(s) 856, 1029, 1506
MaeIII GTNAC 8 cut(s) 431, 455, 1502, 1612, 1658, 1736, 1750, 1970
MfeI CAATTG 1 cut(s) 2051
MflI RGATCY 2 cut(s) 244, 407
MhlI GDGCHC 5 cut(s) 232, 574, 847, 1192, 1298
MlyI GAGTC 2 cut(s) 1303, 1554
MmeI TCCRAC 1 cut(s) 1756
MseI TTAA 6 cut(s) 54, 132, 210, 552, 1607, 2010
MslI CAYNNNNRTG 4 cut(s) 63, 603, 737, 1932
MspA1I CMGCKG 1 cut(s) 1590
MspCI CTTAAG 2 cut(s) 209, 551
MspR9I CCNGG 4 cut(s) 915, 1520, 1624, 1887
MunI CAATTG 1 cut(s) 2051
Mva1269I GAATGC 3 cut(s) 80, 128, 1238
MvaI CCWGG 4 cut(s) 915, 1520, 1624, 1887
MvnI CGCG 1 cut(s) 51
MwoI GCNNNNNNNGC 9 cut(s) 114, 123, 471, 1323, 1332, 1524, 1869, 1878, 1887
NcoI CCATGG 2 cut(s) 371, 1456
NdeI CATATG 1 cut(s) 803
NlaIV GGNNCC 3 cut(s) 377, 545, 1891
NmuCI GTSAC 2 cut(s) 1658, 1750
NspI RCATGY 4 cut(s) 150, 1188, 1260, 1763
PagI TCATGA 6 cut(s) 61, 193, 487, 822, 1249, 1465
PciI ACATGT 2 cut(s) 1256, 1759
PciSI GCTCTTC 2 cut(s) 1038, 1852
PcsI WCGNNNNNNNCGW 1 cut(s) 853
PctI GAATGC 3 cut(s) 80, 128, 1238
PfeI GAWTC 2 cut(s) 484, 1386
PflMI CCANNNNNTGG 1 cut(s) 2056
PfoI TCCNGGA 1 cut(s) 913
PkrI GCNGC 3 cut(s) 119, 1676, 1883
Ple19I CGATCG 1 cut(s) 790
PleI GAGTC 2 cut(s) 1303, 1553
PmaCI CACGTG 1 cut(s) 857
PmlI CACGTG 1 cut(s) 857
PpsI GAGTC 2 cut(s) 1303, 1553
Ppu21I YACGTR 1 cut(s) 857
PscI ACATGT 2 cut(s) 1256, 1759
Psp124BI GAGCTC 2 cut(s) 232, 574
Psp6I CCWGG 4 cut(s) 913, 1518, 1622, 1885
PspCI CACGTG 1 cut(s) 857
PspEI GGTNACC 1 cut(s) 455
PspGI CCWGG 4 cut(s) 913, 1518, 1622, 1885
PspN4I GGNNCC 3 cut(s) 377, 545, 1891
PspPI GGNCC 4 cut(s) 350, 715, 911, 1889
PsuI RGATCY 2 cut(s) 244, 407
PvuI CGATCG 1 cut(s) 790
RsaI GTAC 7 cut(s) 151, 810, 1059, 1561, 1628, 1817, 2000
RsaNI GTAC 7 cut(s) 150, 809, 1058, 1560, 1627, 1816, 1999
RseI CAYNNNNRTG 4 cut(s) 63, 603, 737, 1932
SacI GAGCTC 2 cut(s) 232, 574
SalI GTCGAC 1 cut(s) 179
SapI GCTCTTC 2 cut(s) 1038, 1852
SaqAI TTAA 6 cut(s) 54, 132, 210, 552, 1607, 2010
SatI GCNGC 3 cut(s) 118, 1675, 1882
Sau96I GGNCC 4 cut(s) 350, 715, 911, 1889
ScaI AGTACT 2 cut(s) 1817, 2000
SchI GAGTC 2 cut(s) 1303, 1554
ScrFI CCNGG 4 cut(s) 915, 1520, 1624, 1887
SduI GDGCHC 5 cut(s) 232, 574, 847, 1192, 1298
SfaNI GCATC 3 cut(s) 46, 70, 757
SinI GGWCC 2 cut(s) 715, 911
SmiMI CAYNNNNRTG 4 cut(s) 63, 603, 737, 1932
SmlI CTYRAG 2 cut(s) 209, 551
SmoI CTYRAG 2 cut(s) 209, 551
SsiI CCGC 7 cut(s) 49, 264, 474, 1527, 1588, 1674, 1746
SspI AATATT 3 cut(s) 136, 1682, 1943
SspMI CTAG 2 cut(s) 411, 1493
SstI GAGCTC 2 cut(s) 232, 574
StyD4I CCNGG 4 cut(s) 913, 1518, 1622, 1885
StyI CCWWGG 3 cut(s) 371, 1456, 2027
TaaI ACNGT 3 cut(s) 1444, 1502, 1612
TaiI ACGT 3 cut(s) 859, 1032, 1509
TaqI TCGA 9 cut(s) 91, 162, 180, 1080, 1113, 1129, 1149, 1533, 1812
TatI WGTACW 4 cut(s) 149, 808, 1815, 1998
TauI GCSGC 1 cut(s) 1677
TfiI GAWTC 2 cut(s) 484, 1386
Tru1I TTAA 6 cut(s) 54, 132, 210, 552, 1607, 2010
Tru9I TTAA 6 cut(s) 54, 132, 210, 552, 1607, 2010
TscAI CASTG 4 cut(s) 571, 622, 674, 1311
TseFI GTSAC 2 cut(s) 1658, 1750
TseI GCWGC 2 cut(s) 117, 1881
Tsp45I GTSAC 2 cut(s) 1658, 1750
TspRI CASTG 4 cut(s) 571, 622, 674, 1311
Van91I CCANNNNNTGG 1 cut(s) 2056
Vha464I CTTAAG 2 cut(s) 209, 551
VpaK11BI GGWCC 2 cut(s) 715, 911
XapI RAATTY 2 cut(s) 1350, 1371
XbaI TCTAGA 1 cut(s) 410
XceI RCATGY 4 cut(s) 150, 1188, 1260, 1763
XmiI GTMKAC 1 cut(s) 180
XspI CTAG 2 cut(s) 411, 1493
ZrmI AGTACT 2 cut(s) 1817, 2000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.