BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| C1_2 | PF03107 | 162 - 205 | 3.1e-10 | C1 domain |
| C1_2 | PF03107 | 216 - 265 | 4.7e-10 | C1 domain |
| C1_2 | PF03107 | 302 - 351 | 1.7e-09 | C1 domain |
| C1_2 | PF03107 | 428 - 469 | 3.4e-06 | C1 domain |
| C1_2 | PF03107 | 479 - 529 | 2.2e-08 | C1 domain |
| C1-like_CT | PF22926 | 545 - 587 | 3.4e-10 | C1 domain-like, C-terminal |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1675 |
| AccBSI | CCGCTC | 1 cut(s) | 117 |
| AccII | CGCG | 2 cut(s) | 564, 1127 |
| AciI | CCGC | 3 cut(s) | 115, 259, 496 |
| AclWI | GGATC | 6 cut(s) | 383, 791, 929, 942, 1286, 1454 |
| AcuI | CTGAAG | 1 cut(s) | 202 |
| AfaI | GTAC | 5 cut(s) | 94, 289, 1306, 1521, 1654 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 930 |
| AflII | CTTAAG | 2 cut(s) | 326, 1297 |
| AflIII | ACRYGT | 4 cut(s) | 562, 1052, 1085, 1125 |
| AgsI | TTSAA | 7 cut(s) | 25, 518, 720, 805, 1543, 1571, 1686 |
| AjnI | CCWGG | 1 cut(s) | 951 |
| AleI | CACNNNNGTG | 1 cut(s) | 1371 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 816, 848 |
| AluBI | AGCT | 7 cut(s) | 139, 183, 213, 325, 760, 1188, 1546 |
| AluI | AGCT | 7 cut(s) | 139, 183, 213, 325, 760, 1188, 1546 |
| Alw21I | GWGCWC | 3 cut(s) | 350, 762, 1343 |
| Alw26I | GTCTC | 1 cut(s) | 1442 |
| Alw44I | GTGCAC | 2 cut(s) | 346, 1339 |
| AlwI | GGATC | 6 cut(s) | 383, 791, 929, 942, 1286, 1454 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1562 |
| AoxI | GGCC | 1 cut(s) | 669 |
| ApaLI | GTGCAC | 2 cut(s) | 346, 1339 |
| ApeKI | GCWGC | 1 cut(s) | 180 |
| AseI | ATTAAT | 1 cut(s) | 663 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1203, 1637 |
| AspS9I | GGNCC | 2 cut(s) | 532, 669 |
| AsuC2I | CCSGG | 1 cut(s) | 263 |
| AsuHPI | GGTGA | 3 cut(s) | 430, 451, 1199 |
| AvaII | GGWCC | 1 cut(s) | 532 |
| BaeGI | GKGCMC | 3 cut(s) | 350, 774, 1343 |
| BamHI | GGATCC | 1 cut(s) | 934 |
| BanII | GRGCYC | 1 cut(s) | 762 |
| BbsI | GAAGAC | 4 cut(s) | 27, 495, 1460, 1496 |
| Bbv12I | GWGCWC | 3 cut(s) | 350, 762, 1343 |
| BbvI | GCAGC | 1 cut(s) | 192 |
| BccI | CCATC | 7 cut(s) | 523, 597, 743, 932, 1106, 1130, 1227 |
| BceAI | ACGGC | 1 cut(s) | 695 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1587, 1621 |
| BciT130I | CCWGG | 1 cut(s) | 953 |
| BclI | TGATCA | 1 cut(s) | 1378 |
| BcnI | CCSGG | 1 cut(s) | 263 |
| BcoDI | GTCTC | 1 cut(s) | 1442 |
| BfaI | CTAG | 3 cut(s) | 702, 1037, 1547 |
| BfmI | CTRYAG | 2 cut(s) | 943, 1606 |
| BfrI | CTTAAG | 2 cut(s) | 326, 1297 |
| BfuAI | ACCTGC | 1 cut(s) | 1675 |
| BglII | AGATCT | 1 cut(s) | 252 |
| BisI | GCNGC | 1 cut(s) | 181 |
| BlsI | GCNGC | 1 cut(s) | 182 |
| Bme1390I | CCNGG | 2 cut(s) | 263, 953 |
| Bme18I | GGWCC | 1 cut(s) | 532 |
| BmgT120I | GGNCC | 2 cut(s) | 532, 669 |
| BmiI | GGNNCC | 1 cut(s) | 936 |
| BmrFI | CCNGG | 2 cut(s) | 263, 953 |
| BmsI | GCATC | 3 cut(s) | 938, 993, 1679 |
| BpiI | GAAGAC | 4 cut(s) | 27, 495, 1460, 1496 |
| BpuEI | CTTGAG | 1 cut(s) | 233 |
| BpuMI | CCSGG | 1 cut(s) | 263 |
| BsaAI | YACGTR | 1 cut(s) | 1086 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1218, 1290 |
| BsaJI | CCNNGG | 1 cut(s) | 995 |
| BsaWI | WCCGGW | 1 cut(s) | 342 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 816, 846 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 930 |
| Bse3DI | GCAATG | 1 cut(s) | 36 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1218, 1290 |
| BseBI | CCWGG | 1 cut(s) | 953 |
| BseDI | CCNNGG | 1 cut(s) | 995 |
| BseGI | GGATG | 4 cut(s) | 76, 754, 874, 1225 |
| BseJI | GATNNNNATC | 2 cut(s) | 1218, 1290 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 930 |
| BseMI | GCAATG | 1 cut(s) | 36 |
| BseMII | CTCAG | 1 cut(s) | 874 |
| BseSI | GKGCMC | 3 cut(s) | 350, 774, 1343 |
| BseXI | GCAGC | 1 cut(s) | 192 |
| BsgI | GTGCAG | 1 cut(s) | 199 |
| Bsh1236I | CGCG | 2 cut(s) | 564, 1127 |
| Bsh1285I | CGRYCG | 1 cut(s) | 496 |
| BshFI | GGCC | 1 cut(s) | 671 |
| BsiEI | CGRYCG | 1 cut(s) | 496 |
| BsiHKAI | GWGCWC | 3 cut(s) | 350, 762, 1343 |
| BsiSI | CCGG | 3 cut(s) | 262, 343, 1422 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 930 |
| BsmAI | GTCTC | 1 cut(s) | 1442 |
| BsmBI | CGTCTC | 1 cut(s) | 1442 |
| BsmI | GAATGC | 2 cut(s) | 524, 692 |
| BsnI | GGCC | 1 cut(s) | 671 |
| Bsp1286I | GDGCHC | 4 cut(s) | 350, 762, 774, 1343 |
| BspACI | CCGC | 3 cut(s) | 115, 259, 496 |
| BspANI | GGCC | 1 cut(s) | 671 |
| BspCNI | CTCAG | 1 cut(s) | 873 |
| BspFNI | CGCG | 2 cut(s) | 564, 1127 |
| BspHI | TCATGA | 5 cut(s) | 583, 844, 973, 1132, 1288 |
| BspLI | GGNNCC | 1 cut(s) | 936 |
| BspMAI | CTGCAG | 1 cut(s) | 1610 |
| BspMI | ACCTGC | 1 cut(s) | 1675 |
| BspPI | GGATC | 6 cut(s) | 383, 791, 929, 942, 1286, 1454 |
| BspQI | GCTCTTC | 1 cut(s) | 843 |
| BspTI | CTTAAG | 2 cut(s) | 326, 1297 |
| BsrBI | CCGCTC | 1 cut(s) | 117 |
| BsrDI | GCAATG | 1 cut(s) | 36 |
| BssECI | CCNNGG | 1 cut(s) | 995 |
| Bst2UI | CCWGG | 1 cut(s) | 953 |
| Bst4CI | ACNGT | 4 cut(s) | 287, 581, 1203, 1309 |
| Bst6I | CTCTTC | 2 cut(s) | 730, 843 |
| BstAFI | CTTAAG | 2 cut(s) | 326, 1297 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 177, 354, 1338 |
| BstBAI | YACGTR | 1 cut(s) | 1086 |
| BstC8I | GCNNGC | 2 cut(s) | 224, 323 |
| BstDEI | CTNAG | 4 cut(s) | 140, 267, 860, 1499 |
| BstF5I | GGATG | 4 cut(s) | 76, 754, 874, 1225 |
| BstFNI | CGCG | 2 cut(s) | 564, 1127 |
| BstMAI | GTCTC | 1 cut(s) | 1442 |
| BstMCI | CGRYCG | 1 cut(s) | 496 |
| BstNI | CCWGG | 1 cut(s) | 953 |
| BstNSI | RCATGY | 3 cut(s) | 480, 857, 901 |
| BstSCI | CCNGG | 2 cut(s) | 261, 951 |
| BstSFI | CTRYAG | 2 cut(s) | 943, 1606 |
| BstSLI | GKGCMC | 3 cut(s) | 350, 774, 1343 |
| BstUI | CGCG | 2 cut(s) | 564, 1127 |
| BstV1I | GCAGC | 1 cut(s) | 192 |
| BstV2I | GAAGAC | 4 cut(s) | 27, 495, 1460, 1496 |
| BstX2I | RGATCY | 5 cut(s) | 252, 388, 796, 934, 1459 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1112 |
| BstYI | RGATCY | 5 cut(s) | 252, 388, 796, 934, 1459 |
| BsuRI | GGCC | 1 cut(s) | 671 |
| BtgZI | GCGATG | 1 cut(s) | 575 |
| BtsCI | GGATG | 4 cut(s) | 76, 754, 874, 1225 |
| BtsI | GCAGTG | 2 cut(s) | 166, 1615 |
| BtsIMutI | CAGTG | 3 cut(s) | 166, 1107, 1615 |
| BveI | ACCTGC | 1 cut(s) | 1675 |
| Cac8I | GCNNGC | 2 cut(s) | 224, 323 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1562 |
| CciI | TCATGA | 5 cut(s) | 583, 844, 973, 1132, 1288 |
| Cfr13I | GGNCC | 2 cut(s) | 532, 669 |
| CseI | GACGC | 1 cut(s) | 553 |
| Csp6I | GTAC | 5 cut(s) | 93, 288, 1305, 1520, 1653 |
| CviQI | GTAC | 5 cut(s) | 93, 288, 1305, 1520, 1653 |
| DdeI | CTNAG | 4 cut(s) | 140, 267, 860, 1499 |
| Eam1104I | CTCTTC | 2 cut(s) | 730, 843 |
| EarI | CTCTTC | 2 cut(s) | 730, 843 |
| EciI | GGCGGA | 1 cut(s) | 248 |
| Ecl136II | GAGCTC | 1 cut(s) | 760 |
| Eco24I | GRGCYC | 1 cut(s) | 762 |
| Eco32I | GATATC | 1 cut(s) | 829 |
| Eco47I | GGWCC | 1 cut(s) | 532 |
| Eco53kI | GAGCTC | 1 cut(s) | 760 |
| Eco57I | CTGAAG | 1 cut(s) | 202 |
| EcoICRI | GAGCTC | 1 cut(s) | 760 |
| EcoRII | CCWGG | 1 cut(s) | 951 |
| EcoRV | GATATC | 1 cut(s) | 829 |
| EcoT22I | ATGCAT | 2 cut(s) | 478, 1334 |
| EcoT38I | GRGCYC | 1 cut(s) | 762 |
| Esp3I | CGTCTC | 1 cut(s) | 1442 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 45, 77 |
| FbaI | TGATCA | 1 cut(s) | 1378 |
| Fnu4HI | GCNGC | 1 cut(s) | 181 |
| FokI | GGATG | 4 cut(s) | 63, 761, 881, 1212 |
| FriOI | GRGCYC | 1 cut(s) | 762 |
| Fsp4HI | GCNGC | 1 cut(s) | 181 |
| FspBI | CTAG | 3 cut(s) | 702, 1037, 1547 |
| GluI | GCNGC | 1 cut(s) | 181 |
| HaeIII | GGCC | 1 cut(s) | 671 |
| HapII | CCGG | 3 cut(s) | 262, 343, 1422 |
| HgaI | GACGC | 1 cut(s) | 553 |
| HincII | GTYRAC | 2 cut(s) | 283, 895 |
| HindII | GTYRAC | 2 cut(s) | 283, 895 |
| HindIII | AAGCTT | 1 cut(s) | 323 |
| HinfI | GANTC | 3 cut(s) | 101, 1418, 1551 |
| HpaI | GTTAAC | 1 cut(s) | 895 |
| HpaII | CCGG | 3 cut(s) | 262, 343, 1422 |
| HphI | GGTGA | 3 cut(s) | 430, 451, 1199 |
| Hpy166II | GTNNAC | 6 cut(s) | 283, 348, 895, 1341, 1414, 1520 |
| Hpy188I | TCNGA | 6 cut(s) | 654, 863, 999, 1069, 1198, 1464 |
| Hpy8I | GTNNAC | 6 cut(s) | 283, 348, 895, 1341, 1414, 1520 |
| Hpy99I | CGWCG | 2 cut(s) | 932, 1065 |
| HpyAV | CCTTC | 2 cut(s) | 71, 620 |
| HpyCH4III | ACNGT | 4 cut(s) | 287, 581, 1203, 1309 |
| HpyCH4IV | ACGT | 5 cut(s) | 188, 243, 1054, 1085, 1241 |
| HpyF3I | CTNAG | 4 cut(s) | 140, 267, 860, 1499 |
| HpySE526I | ACGT | 5 cut(s) | 188, 243, 1054, 1085, 1241 |
| Ksp22I | TGATCA | 1 cut(s) | 1378 |
| KspAI | GTTAAC | 1 cut(s) | 895 |
| LguI | GCTCTTC | 1 cut(s) | 843 |
| LmnI | GCTCC | 1 cut(s) | 122 |
| Lsp1109I | GCAGC | 1 cut(s) | 192 |
| LweI | GCATC | 3 cut(s) | 938, 993, 1679 |
| MaeI | CTAG | 3 cut(s) | 702, 1037, 1547 |
| MaeII | ACGT | 5 cut(s) | 188, 243, 1054, 1085, 1241 |
| MaeIII | GTNAC | 4 cut(s) | 55, 457, 880, 1389 |
| MbiI | CCGCTC | 1 cut(s) | 117 |
| MflI | RGATCY | 5 cut(s) | 252, 388, 796, 934, 1459 |
| MhlI | GDGCHC | 4 cut(s) | 350, 762, 774, 1343 |
| MluCI | AATT | 7 cut(s) | 19, 227, 405, 523, 664, 874, 1072 |
| MluI | ACGCGT | 2 cut(s) | 562, 1125 |
| MlyI | GAGTC | 1 cut(s) | 110 |
| MmeI | TCCRAC | 1 cut(s) | 632 |
| MnlI | CCTC | 9 cut(s) | 446, 452, 671, 1005, 1033, 1163, 1329, 1582, 1611 |
| Mph1103I | ATGCAT | 2 cut(s) | 478, 1334 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1203, 1637 |
| MslI | CAYNNNNRTG | 3 cut(s) | 365, 1110, 1371 |
| MspCI | CTTAAG | 2 cut(s) | 326, 1297 |
| MspI | CCGG | 3 cut(s) | 262, 343, 1422 |
| MspR9I | CCNGG | 2 cut(s) | 263, 953 |
| Mva1269I | GAATGC | 2 cut(s) | 524, 692 |
| MvaI | CCWGG | 1 cut(s) | 953 |
| MvnI | CGCG | 2 cut(s) | 564, 1127 |
| NciI | CCSGG | 1 cut(s) | 263 |
| NlaIV | GGNNCC | 1 cut(s) | 936 |
| NmuCI | GTSAC | 2 cut(s) | 457, 1389 |
| NsiI | ATGCAT | 2 cut(s) | 478, 1334 |
| NspI | RCATGY | 3 cut(s) | 480, 857, 901 |
| OliI | CACNNNNGTG | 1 cut(s) | 1371 |
| PagI | TCATGA | 5 cut(s) | 583, 844, 973, 1132, 1288 |
| PciSI | GCTCTTC | 1 cut(s) | 843 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 1003, 1060, 1422 |
| PctI | GAATGC | 2 cut(s) | 524, 692 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1203, 1637 |
| PfeI | GAWTC | 2 cut(s) | 1418, 1551 |
| PflFI | GACNNNGTC | 1 cut(s) | 1260 |
| PkrI | GCNGC | 1 cut(s) | 182 |
| PleI | GAGTC | 1 cut(s) | 109 |
| PpsI | GAGTC | 1 cut(s) | 109 |
| Ppu21I | YACGTR | 1 cut(s) | 1086 |
| PshBI | ATTAAT | 1 cut(s) | 663 |
| Psp124BI | GAGCTC | 1 cut(s) | 762 |
| Psp6I | CCWGG | 1 cut(s) | 951 |
| PspGI | CCWGG | 1 cut(s) | 951 |
| PspN4I | GGNNCC | 1 cut(s) | 936 |
| PspPI | GGNCC | 2 cut(s) | 532, 669 |
| PstI | CTGCAG | 1 cut(s) | 1610 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1562 |
| PsuI | RGATCY | 5 cut(s) | 252, 388, 796, 934, 1459 |
| PsyI | GACNNNGTC | 1 cut(s) | 1260 |
| RsaI | GTAC | 5 cut(s) | 94, 289, 1306, 1521, 1654 |
| RsaNI | GTAC | 5 cut(s) | 93, 288, 1305, 1520, 1653 |
| RseI | CAYNNNNRTG | 3 cut(s) | 365, 1110, 1371 |
| SacI | GAGCTC | 1 cut(s) | 762 |
| SapI | GCTCTTC | 1 cut(s) | 843 |
| SatI | GCNGC | 1 cut(s) | 181 |
| Sau96I | GGNCC | 2 cut(s) | 532, 669 |
| SchI | GAGTC | 1 cut(s) | 110 |
| ScrFI | CCNGG | 2 cut(s) | 263, 953 |
| SduI | GDGCHC | 4 cut(s) | 350, 762, 774, 1343 |
| SfaNI | GCATC | 3 cut(s) | 938, 993, 1679 |
| SfcI | CTRYAG | 2 cut(s) | 943, 1606 |
| SinI | GGWCC | 1 cut(s) | 532 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 365, 1110, 1371 |
| SmlI | CTYRAG | 3 cut(s) | 248, 326, 1297 |
| SmoI | CTYRAG | 3 cut(s) | 248, 326, 1297 |
| Sse9I | AATT | 7 cut(s) | 19, 227, 405, 523, 664, 874, 1072 |
| SsiI | CCGC | 3 cut(s) | 115, 259, 496 |
| SspI | AATATT | 1 cut(s) | 542 |
| SspMI | CTAG | 3 cut(s) | 702, 1037, 1547 |
| SstI | GAGCTC | 1 cut(s) | 762 |
| StyD4I | CCNGG | 2 cut(s) | 261, 951 |
| TaaI | ACNGT | 4 cut(s) | 287, 581, 1203, 1309 |
| TaiI | ACGT | 5 cut(s) | 191, 246, 1057, 1088, 1244 |
| TaqI | TCGA | 5 cut(s) | 316, 762, 927, 1063, 1597 |
| TasI | AATT | 7 cut(s) | 19, 227, 405, 523, 664, 874, 1072 |
| TatI | WGTACW | 3 cut(s) | 287, 1519, 1652 |
| TfiI | GAWTC | 2 cut(s) | 1418, 1551 |
| TscAI | CASTG | 3 cut(s) | 173, 1114, 1615 |
| TseFI | GTSAC | 2 cut(s) | 457, 1389 |
| TseI | GCWGC | 1 cut(s) | 180 |
| Tsp45I | GTSAC | 2 cut(s) | 457, 1389 |
| TspGWI | ACGGA | 3 cut(s) | 54, 690, 1399 |
| TspRI | CASTG | 3 cut(s) | 173, 1114, 1615 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1260 |
| Vha464I | CTTAAG | 2 cut(s) | 326, 1297 |
| VneI | GTGCAC | 2 cut(s) | 346, 1339 |
| VpaK11BI | GGWCC | 1 cut(s) | 532 |
| VspI | ATTAAT | 1 cut(s) | 663 |
| XbaI | TCTAGA | 1 cut(s) | 1036 |
| XceI | RCATGY | 3 cut(s) | 480, 857, 901 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1203, 1637 |
| XspI | CTAG | 3 cut(s) | 702, 1037, 1547 |
| Zsp2I | ATGCAT | 2 cut(s) | 478, 1334 |