AT4G14980

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0000226
Physical Location & Seq
Reverse (-)
8561876 .. 8563667
1792 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G14980.1

Sequence Viewer

Length: 1638 bp
ATGCTTTCTACTGAATCTGAAATAGAGACCAGGCCTAATCTTTTGGTGCCGTTGCATGAACATCCTTTATCATGTACAGAAGAATTTATCTATTCTTGCGATTTTTGTAATAGTCGAAATGGCATTGCCTATCAGTGCACGGAGTGCGGCTATCGGCTGCACAAAGACTGTATCCAGGGCTTTCTCAGCTATCCATCTCCGTGCGGTCACTCTCTCAAGATCTCCATGCCCAACAAATCACCTCAATATGCAAATGACCGATGCCATTTTTGTCTGTGCAAGCTTAAGACTCCGTTTGCTCGTTGCACGGTGTGCAACATAAACATTAGTCCACTTTGTATGGTAAAGCAACCACCACTCACTATTTGTAACCCAAAGCACCACAAGCATAGCCTCACCCTCTTGGTAAGGTTAGTCATCTTTACTTGTAATGCATGTGGTGTGGAAGGCGACCGCAATCCTTATGTATGTCTTCAATGCAATCTGATGGTCCACAAAGACTGTATTGAGAATCTACCGCGAGTCATATGCATCAATCGGCACGATCATCGCATCTTTCATACTTTCCATCTTGGTCAACGAGAAGAACATTGGGAGTGTGGAGTTTGTCGGAAGACGGTTGATTGGGTATATGGAGCTTTTAAATGCTCTCGTTGTCCTAATTACGCCGTTCATTCAAGATGTGCAACGAAAAAGGAAGTGTGGGATGGGATCGAACTTGAAGATGTACCCGAGGAGGAGGAAGAAGTCGAAGAACCATTTGTGGTAATTAATGAAAAAGAGATCATTCATTTTAGTCATGAAGAACATGTTCTCAGATTGGATGAGAATTATGTTACGGATAATGTTAACATGCGTTGCAGAGGTTGCGTTCTTGCCATCAACGGTGATTCCTGCTACAAATGCGTGGAATGTGATTATATTCTTCACAAAGCATGTGCTAGTCTTCCTCGGAAGAAGCGACATTTGTTGCATAATCATAAACTCACTCTACAGGTTGACGAGGCTGCATCTTCAGATTTTGTGTGTACAGCTTGTAGAACGTATTCTAATGGTTTCAGGTACAAGTGTTTCGAAGGTTGCGAAGATGATGTTGTGTATGATGTTCGGTGTAGTTCCGTATCGGAACCATTTCAGCATGATCTGCATCCACATCCCTTATATTGGACATTGGAAAGTTCCAAACGATGTCAAGCTTGTGGCACGGAAACTGATGATAATCTCTTAAATTGTACGGTTTGTGATGATTACGCATTATGCATGAAGTGTGCCACTTTACCAAGAAAGGTAAAACATAGGTGTGATGATCATTTTCTGTCACTATGTCAAGGTGTGGGAAACGCAAGCGGCAACTTGTGGTGTGATATTTGTGAGACCAAGACAGATCCAAATGTATGTTACTATACATGTGAAGAATGTGGGCTTAGTCTCCATCTTAATTGTGTTCTTGGTGATTTTTATTATGTTAAGGTAATTCCTGATCAGCCGAAAGTATTTGCCAACAATGGGGTTACTCGACTTTTTTGCGGCGTTTGTGAAGTTCGTTGCAAGTTTCCCTTCATCATGTGGGGAGCTGTAGGAGACTTTACTGGCTACGTTTGTTCGATTAACTGTGTATTCCCAAAAGCGGATAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2

Protein Analysis

545

Amino Acids

62.33

Weight (kDa)

6.15

Isoelectric Point (pI)

51.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 126 - 169 4.8e-11 C1 domain
C1_2 PF03107 179 - 229 1.2e-08 C1 domain
C1_2 PF03107 265 - 314 3.7e-10 C1 domain
C1_2 PF03107 324 - 371 5e-08 C1 domain
C1_2 PF03107 382 - 424 7e-07 C1 domain
C1_2 PF03107 433 - 482 8e-08 C1 domain
C1-like_CT PF22926 497 - 539 1e-10 C1 domain-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 46
AccII CGCG 1 cut(s) 520
AciI CCGC 7 cut(s) 147, 204, 454, 518, 1347, 1527, 1628
AclWI GGATC 2 cut(s) 719, 1379
AcsI RAATTY 1 cut(s) 83
AcuI CTGAAG 1 cut(s) 999
AdeI CACNNNGTG 2 cut(s) 144, 312
AfaI GTAC 5 cut(s) 76, 729, 1030, 1064, 1234
AfiI CCNNNNNNNGG 3 cut(s) 1164, 1506, 1627
AflII CTTAAG 1 cut(s) 284
AflIII ACRYGT 2 cut(s) 808, 1406
AgsI TTSAA 3 cut(s) 476, 678, 722
AjnI CCWGG 2 cut(s) 29, 174
AluBI AGCT 6 cut(s) 189, 283, 638, 1034, 1196, 1574
AluI AGCT 6 cut(s) 189, 283, 638, 1034, 1196, 1574
Alw21I GWGCWC 1 cut(s) 140
Alw26I GTCTC 4 cut(s) 20, 1367, 1433, 1575
Alw44I GTGCAC 1 cut(s) 136
AlwI GGATC 2 cut(s) 719, 1379
Ama87I CYCGRG 1 cut(s) 731
AoxI GGCC 1 cut(s) 32
ApaLI GTGCAC 1 cut(s) 136
ApeKI GCWGC 2 cut(s) 157, 1007
ApoI RAATTY 1 cut(s) 83
AseI ATTAAT 1 cut(s) 771
Asp700I GAANNNNTTC 3 cut(s) 810, 1045, 1131
AspS9I GGNCC 1 cut(s) 490
AsuHPI GGTGA 4 cut(s) 231, 388, 899, 1463
AsuII TTCGAA 1 cut(s) 1074
AvaI CYCGRG 1 cut(s) 731
AvaII GGWCC 1 cut(s) 490
BaeGI GKGCMC 1 cut(s) 140
BaeI ACNNNNGTAYC 2 cut(s) 1054, 1087
BanI GGYRCC 1 cut(s) 46
BbsI GAAGAC 3 cut(s) 464, 620, 938
Bbv12I GWGCWC 1 cut(s) 140
BbvI GCAGC 2 cut(s) 144, 994
BccI CCATC 6 cut(s) 202, 481, 576, 701, 887, 1440
BceAI ACGGC 2 cut(s) 34, 653
BcgI CGANNNNNNTGC 6 cut(s) 510, 530, 544, 564, 1506, 1540
BciT130I CCWGG 2 cut(s) 31, 176
BciVI GTATCC 1 cut(s) 182
BclI TGATCA 2 cut(s) 1306, 1480
BcoDI GTCTC 4 cut(s) 20, 1367, 1433, 1575
BfaI CTAG 1 cut(s) 942
BfmI CTRYAG 2 cut(s) 992, 1575
BfrI CTTAAG 1 cut(s) 284
BfuI GTATCC 1 cut(s) 182
BglII AGATCT 1 cut(s) 219
BisI GCNGC 5 cut(s) 148, 158, 1008, 1348, 1528
BlsI GCNGC 5 cut(s) 149, 159, 1009, 1349, 1529
Bme1390I CCNGG 2 cut(s) 31, 176
Bme18I GGWCC 1 cut(s) 490
BmeT110I CYCGRG 1 cut(s) 731
BmgT120I GGNCC 1 cut(s) 490
BmiI GGNNCC 2 cut(s) 48, 1128
BmrFI CCNGG 2 cut(s) 31, 176
BmsI GCATC 5 cut(s) 251, 540, 561, 1019, 1156
BpiI GAAGAC 3 cut(s) 464, 620, 938
Bpu14I TTCGAA 1 cut(s) 1074
BpuEI CTTGAG 1 cut(s) 200
BsaBI GATNNNNATC 2 cut(s) 1146, 1218
BsaI GGTCTC 2 cut(s) 20, 1367
BsaJI CCNNGG 3 cut(s) 175, 732, 950
Bsc4I CCNNNNNNNGG 3 cut(s) 1164, 1506, 1627
Bse1I ACTGG 1 cut(s) 1594
Bse3DI GCAATG 1 cut(s) 123
Bse8I GATNNNNATC 2 cut(s) 1146, 1218
BseBI CCWGG 2 cut(s) 31, 176
BseDI CCNNGG 3 cut(s) 175, 732, 950
BseGI GGATG 5 cut(s) 61, 712, 829, 1147, 1153
BseJI GATNNNNATC 2 cut(s) 1146, 1218
BseLI CCNNNNNNNGG 3 cut(s) 1164, 1506, 1627
BseMI GCAATG 1 cut(s) 123
BseMII CTCAG 2 cut(s) 199, 829
BseNI ACTGG 1 cut(s) 1594
BseRI GAGGAG 2 cut(s) 749, 752
BseSI GKGCMC 1 cut(s) 140
BseXI GCAGC 2 cut(s) 144, 994
BsgI GTGCAG 1 cut(s) 143
Bsh1236I CGCG 1 cut(s) 520
Bsh1285I CGRYCG 1 cut(s) 454
BshFI GGCC 1 cut(s) 34
BshNI GGYRCC 1 cut(s) 46
BsiEI CGRYCG 1 cut(s) 454
BsiHKAI GWGCWC 1 cut(s) 140
BsiHKCI CYCGRG 1 cut(s) 731
BslI CCNNNNNNNGG 3 cut(s) 1164, 1506, 1627
BsmAI GTCTC 4 cut(s) 20, 1367, 1433, 1575
BsnI GGCC 1 cut(s) 34
Bso31I GGTCTC 2 cut(s) 20, 1367
BsoBI CYCGRG 1 cut(s) 731
Bsp119I TTCGAA 1 cut(s) 1074
Bsp1286I GDGCHC 1 cut(s) 140
Bsp1407I TGTACA 2 cut(s) 74, 1028
Bsp143I GATC 8 cut(s) 219, 544, 711, 783, 1141, 1306, 1384, 1480
BspACI CCGC 7 cut(s) 147, 204, 454, 518, 1347, 1527, 1628
BspANI GGCC 1 cut(s) 34
BspCNI CTCAG 2 cut(s) 198, 828
BspFNI CGCG 1 cut(s) 520
BspHI TCATGA 1 cut(s) 799
BspLI GGNNCC 2 cut(s) 48, 1128
BspPI GGATC 2 cut(s) 719, 1379
BspT104I TTCGAA 1 cut(s) 1074
BspT107I GGYRCC 1 cut(s) 46
BspTI CTTAAG 1 cut(s) 284
BspTNI GGTCTC 2 cut(s) 20, 1367
BsrDI GCAATG 1 cut(s) 123
BsrGI TGTACA 2 cut(s) 74, 1028
BsrI ACTGG 1 cut(s) 1594
BssECI CCNNGG 3 cut(s) 175, 732, 950
BssMI GATC 8 cut(s) 219, 544, 711, 783, 1141, 1306, 1384, 1480
Bst2UI CCWGG 2 cut(s) 31, 176
Bst4CI ACNGT 7 cut(s) 170, 310, 503, 619, 887, 1237, 1613
BstAFI CTTAAG 1 cut(s) 284
BstAPI GCANNNNNTGC 4 cut(s) 144, 312, 867, 1144
BstAUI TGTACA 2 cut(s) 74, 1028
BstBI TTCGAA 1 cut(s) 1074
BstC8I GCNNGC 2 cut(s) 281, 1345
BstDEI CTNAG 3 cut(s) 185, 815, 1424
BstF5I GGATG 5 cut(s) 61, 712, 829, 1147, 1153
BstFNI CGCG 1 cut(s) 520
BstKTI GATC 8 cut(s) 222, 547, 714, 786, 1144, 1309, 1387, 1483
BstMAI GTCTC 4 cut(s) 20, 1367, 1433, 1575
BstMBI GATC 8 cut(s) 219, 544, 711, 783, 1141, 1306, 1384, 1480
BstMCI CGRYCG 1 cut(s) 454
BstMWI GCNNNNNNNGC 7 cut(s) 144, 186, 312, 385, 867, 903, 1144
BstNI CCWGG 2 cut(s) 31, 176
BstNSI RCATGY 5 cut(s) 438, 812, 856, 939, 1410
BstSCI CCNGG 2 cut(s) 29, 174
BstSFI CTRYAG 2 cut(s) 992, 1575
BstSLI GKGCMC 1 cut(s) 140
BstUI CGCG 1 cut(s) 520
BstV1I GCAGC 2 cut(s) 144, 994
BstV2I GAAGAC 3 cut(s) 464, 620, 938
BstX2I RGATCY 2 cut(s) 219, 1384
BstYI RGATCY 2 cut(s) 219, 1384
BsuI GTATCC 1 cut(s) 182
BsuRI GGCC 1 cut(s) 34
BtgZI GCGATG 1 cut(s) 533
BtsCI GGATG 5 cut(s) 61, 712, 829, 1147, 1153
BtsIMutI CAGTG 1 cut(s) 140
Cac8I GCNNGC 2 cut(s) 281, 1345
CciI TCATGA 1 cut(s) 799
Cfr13I GGNCC 1 cut(s) 490
Csp6I GTAC 5 cut(s) 75, 728, 1029, 1063, 1233
CviQI GTAC 5 cut(s) 75, 728, 1029, 1063, 1233
DdeI CTNAG 3 cut(s) 185, 815, 1424
DpnI GATC 8 cut(s) 221, 546, 713, 785, 1143, 1308, 1386, 1482
DpnII GATC 8 cut(s) 219, 544, 711, 783, 1141, 1306, 1384, 1480
DraI TTTAAA 1 cut(s) 643
DraIII CACNNNGTG 2 cut(s) 144, 312
Eco147I AGGCCT 1 cut(s) 34
Eco31I GGTCTC 2 cut(s) 20, 1367
Eco47I GGWCC 1 cut(s) 490
Eco57I CTGAAG 1 cut(s) 999
Eco88I CYCGRG 1 cut(s) 731
EcoRII CCWGG 2 cut(s) 29, 174
EcoT22I ATGCAT 3 cut(s) 436, 533, 1262
FalI AAGNNNNNCTT 2 cut(s) 1541, 1573
FauNDI CATATG 1 cut(s) 527
FbaI TGATCA 2 cut(s) 1306, 1480
Fnu4HI GCNGC 5 cut(s) 148, 158, 1008, 1348, 1528
FokI GGATG 5 cut(s) 48, 719, 836, 1134, 1140
Fsp4HI GCNGC 5 cut(s) 148, 158, 1008, 1348, 1528
FspBI CTAG 1 cut(s) 942
GluI GCNGC 5 cut(s) 148, 158, 1008, 1348, 1528
HaeIII GGCC 1 cut(s) 34
HincII GTYRAC 3 cut(s) 578, 850, 1000
HindII GTYRAC 3 cut(s) 578, 850, 1000
HindIII AAGCTT 2 cut(s) 281, 1194
HinfI GANTC 5 cut(s) 14, 289, 511, 522, 890
HpaI GTTAAC 1 cut(s) 850
HphI GGTGA 4 cut(s) 231, 388, 899, 1463
Hpy166II GTNNAC 7 cut(s) 138, 332, 493, 578, 850, 1000, 1029
Hpy188I TCNGA 7 cut(s) 19, 486, 612, 818, 954, 1018, 1126
Hpy188III TCNNGA 4 cut(s) 217, 678, 800, 1478
Hpy8I GTNNAC 7 cut(s) 138, 332, 493, 578, 850, 1000, 1029
HpyAV CCTTC 3 cut(s) 440, 1070, 1567
HpyCH4III ACNGT 7 cut(s) 170, 310, 503, 619, 887, 1237, 1613
HpyCH4IV ACGT 2 cut(s) 1043, 1596
HpyF10VI GCNNNNNNNGC 7 cut(s) 144, 186, 312, 385, 867, 903, 1144
HpyF3I CTNAG 3 cut(s) 185, 815, 1424
HpySE526I ACGT 2 cut(s) 1043, 1596
Ksp22I TGATCA 2 cut(s) 1306, 1480
KspAI GTTAAC 1 cut(s) 850
Kzo9I GATC 8 cut(s) 219, 544, 711, 783, 1141, 1306, 1384, 1480
LmnI GCTCC 2 cut(s) 635, 1571
LpnPI CCDG 9 cut(s) 16, 43, 161, 188, 907, 980, 1045, 1491, 1575
Lsp1109I GCAGC 2 cut(s) 144, 994
LweI GCATC 5 cut(s) 251, 540, 561, 1019, 1156
MaeI CTAG 1 cut(s) 942
MaeII ACGT 2 cut(s) 1043, 1596
MaeIII GTNAC 6 cut(s) 206, 368, 835, 1317, 1397, 1510
MalI GATC 8 cut(s) 221, 546, 713, 785, 1143, 1308, 1386, 1482
MboI GATC 8 cut(s) 219, 544, 711, 783, 1141, 1306, 1384, 1480
MflI RGATCY 2 cut(s) 219, 1384
MhlI GDGCHC 1 cut(s) 140
MluCI AATT 7 cut(s) 83, 661, 768, 829, 1228, 1438, 1473
MlyI GAGTC 2 cut(s) 283, 531
MmeI TCCRAC 1 cut(s) 590
MnlI CCTC 9 cut(s) 252, 404, 410, 727, 730, 733, 857, 960, 997
Mph1103I ATGCAT 3 cut(s) 436, 533, 1262
MroXI GAANNNNTTC 3 cut(s) 810, 1045, 1131
MseI TTAA 8 cut(s) 285, 642, 771, 849, 1226, 1437, 1467, 1608
MslI CAYNNNNRTG 2 cut(s) 199, 1299
MspCI CTTAAG 1 cut(s) 284
MspR9I CCNGG 2 cut(s) 31, 176
MvaI CCWGG 2 cut(s) 31, 176
MvnI CGCG 1 cut(s) 520
MwoI GCNNNNNNNGC 7 cut(s) 144, 186, 312, 385, 867, 903, 1144
NdeI CATATG 1 cut(s) 527
NdeII GATC 8 cut(s) 219, 544, 711, 783, 1141, 1306, 1384, 1480
NlaIV GGNNCC 2 cut(s) 48, 1128
NmuCI GTSAC 2 cut(s) 206, 1317
NsiI ATGCAT 3 cut(s) 436, 533, 1262
NspI RCATGY 5 cut(s) 438, 812, 856, 939, 1410
NspV TTCGAA 1 cut(s) 1074
PagI TCATGA 1 cut(s) 799
PceI AGGCCT 1 cut(s) 34
PciI ACATGT 2 cut(s) 808, 1406
PcsI WCGNNNNNNNCGW 2 cut(s) 958, 1080
PdmI GAANNNNTTC 3 cut(s) 810, 1045, 1131
PfeI GAWTC 3 cut(s) 14, 511, 890
PkrI GCNGC 5 cut(s) 149, 159, 1009, 1349, 1529
PleI GAGTC 2 cut(s) 283, 530
PpsI GAGTC 2 cut(s) 283, 530
PscI ACATGT 2 cut(s) 808, 1406
PshBI ATTAAT 1 cut(s) 771
Psp6I CCWGG 2 cut(s) 29, 174
PspGI CCWGG 2 cut(s) 29, 174
PspN4I GGNNCC 2 cut(s) 48, 1128
PspPI GGNCC 1 cut(s) 490
PsuI RGATCY 2 cut(s) 219, 1384
RsaI GTAC 5 cut(s) 76, 729, 1030, 1064, 1234
RsaNI GTAC 5 cut(s) 75, 728, 1029, 1063, 1233
RseI CAYNNNNRTG 2 cut(s) 199, 1299
SaqAI TTAA 8 cut(s) 285, 642, 771, 849, 1226, 1437, 1467, 1608
SatI GCNGC 5 cut(s) 148, 158, 1008, 1348, 1528
Sau3AI GATC 8 cut(s) 219, 544, 711, 783, 1141, 1306, 1384, 1480
Sau96I GGNCC 1 cut(s) 490
SchI GAGTC 2 cut(s) 283, 531
ScrFI CCNGG 2 cut(s) 31, 176
SduI GDGCHC 1 cut(s) 140
SfaNI GCATC 5 cut(s) 251, 540, 561, 1019, 1156
SfcI CTRYAG 2 cut(s) 992, 1575
SfuI TTCGAA 1 cut(s) 1074
SinI GGWCC 1 cut(s) 490
SmiMI CAYNNNNRTG 2 cut(s) 199, 1299
SmlI CTYRAG 2 cut(s) 215, 284
SmoI CTYRAG 2 cut(s) 215, 284
Sse9I AATT 7 cut(s) 83, 661, 768, 829, 1228, 1438, 1473
SseBI AGGCCT 1 cut(s) 34
SsiI CCGC 7 cut(s) 147, 204, 454, 518, 1347, 1527, 1628
SspMI CTAG 1 cut(s) 942
StuI AGGCCT 1 cut(s) 34
StyD4I CCNGG 2 cut(s) 29, 174
TaaI ACNGT 7 cut(s) 170, 310, 503, 619, 887, 1237, 1613
TaiI ACGT 2 cut(s) 1046, 1599
TaqI TCGA 6 cut(s) 115, 714, 750, 1074, 1516, 1604
TaqII GACCGA 1 cut(s) 273
TasI AATT 7 cut(s) 83, 661, 768, 829, 1228, 1438, 1473
TatI WGTACW 2 cut(s) 74, 1028
TauI GCSGC 3 cut(s) 150, 1350, 1530
TfiI GAWTC 3 cut(s) 14, 511, 890
Tru1I TTAA 8 cut(s) 285, 642, 771, 849, 1226, 1437, 1467, 1608
Tru9I TTAA 8 cut(s) 285, 642, 771, 849, 1226, 1437, 1467, 1608
TscAI CASTG 1 cut(s) 140
TseFI GTSAC 2 cut(s) 206, 1317
TseI GCWGC 2 cut(s) 157, 1007
Tsp45I GTSAC 2 cut(s) 206, 1317
TspDTI ATGAA 8 cut(s) 72, 548, 662, 779, 789, 816, 1277, 1549
TspGWI ACGGA 6 cut(s) 155, 189, 282, 854, 1108, 1220
TspRI CASTG 1 cut(s) 140
Vha464I CTTAAG 1 cut(s) 284
VneI GTGCAC 1 cut(s) 136
VpaK11BI GGWCC 1 cut(s) 490
VspI ATTAAT 1 cut(s) 771
XapI RAATTY 1 cut(s) 83
XceI RCATGY 5 cut(s) 438, 812, 856, 939, 1410
XmnI GAANNNNTTC 3 cut(s) 810, 1045, 1131
XspI CTAG 1 cut(s) 942
Zsp2I ATGCAT 3 cut(s) 436, 533, 1262
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.