Rh1BG271700

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000226
Physical Location & Seq
Forward (+)
40715477 .. 40716784
1308 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG271700.1

Sequence Viewer

Length: 1308 bp
ATGGATAAGCAGCAGCTTAAACACTTTGGTCACAGGCATCCATTGATGTTGAAGGAACAATATGGCGGCCGTCTACCAGTTTCATGTGAGGCATGTGGCGATGCAGTGCTAGGTCCTCACTACAGTTGCAACCAATGTTTCGACAAATTCATTCTCCATAAGTCATGTGCGCAGCTACCAAGGGAGATGCTCCAGCACCCTTTGCACAGCAAGCACCCACTTAAACTTCGGACGAAGATTTCAAGAGGCAAATGGTTTGATTGTGATGCTTGTCGGGCACGATCCAATGCCTTCTCCTATAGATGTCGCCCATGTGAGTTCCACCTCGACGTCAAATGTGCTTTCAATTTCAGAAACACAGACAGTATAGTACATTTCAGTCACAAGCATGTATTGAGCTTGAGTACTGAAAATCAATCTGAAGAGGGACCACCACTCTTGTGTACTGGGTGCTTAGAGCAAGTCCTTGGCCCTAGATACATTTGCGAAATTCCTTTCGAGAGGGAGAGAAGCTGCTCATCCATTGTTCTGCATCAATCTTGTGCGAAGCTATCTCGTGAGATCCAGCACCCGATGCACCGCCAACACCCACTTATTCTCAATCAAAATGGAGCACGAGAATCCCACTGTGATGCTTGTGGCAAAGATTGCAGCCGCAGATTCAATTACAGTTGTTTCCGATGTGACTTCAACCTCGACCTCAAATGTGCTTCCGAGAAAGGCTTCAAACATTTCAGTCACGAGCATCCATTAATGTTCCAGAAGGGGGGAGGAGACGACAAGAAGAAAGGAAATAATGGTCCACTAGTTGTTTGCGATGGGTGCCAGAACCATTTACTTGGCCCTAGTTACACTTGCATCAGTACATATCGCGGTCTTAAATGCTCTTTCAATCTCCACAAGTCATGTGCAGACTTACCCCTCGAGATCCAACACCCAGTACACTGTCAACATCCGCTTTTTCTTCTCAATACAATTGAGAATATCAAAGTTAAAAAATGCTCATGTAATGCCTGCAATCAACCTTGCAGATACCGCTACAGCTGTTCCATATGCGATTTCAACCTTGACCTCAACTGTGCCTCCAATTGGCGAAAAATTATCGACACTGAATCTCATGAGCATCAGTTTACGGTGATCCCCCGGAAGGAAATGGCCCAGCTCACCTTATATGTGACGTTTGTGGGGAGTACTGGAGTCGCGCTGCCTACTACTTCTGTAGCATCTGCCAGCTCTGGGTCCATAAGGAATGTGCTTCATTTCCACTCGACACCAAAATACCCGAGCACCAACACCACCTCAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

435

Amino Acids

49.35

Weight (kDa)

8.74

Isoelectric Point (pI)

40.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 10 - 57 3.2e-08 C1 domain
C1_2 PF03107 67 - 114 5.6e-10 C1 domain
C1_2 PF03107 192 - 237 2.5e-09 C1 domain
C1_2 PF03107 314 - 361 8.5e-07 C1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 333
Acc16I TGCGCA 1 cut(s) 171
AccB1I GGYRCC 1 cut(s) 822
AccI GTMKAC 1 cut(s) 73
AccII CGCG 2 cut(s) 873, 1202
AciI CCGC 6 cut(s) 66, 580, 655, 873, 956, 1036
AclWI GGATC 4 cut(s) 276, 556, 922, 1132
AcoI YGGCCR 1 cut(s) 67
AcsI RAATTY 2 cut(s) 146, 489
AcuI CTGAAG 1 cut(s) 441
AcyI GRCGYC 1 cut(s) 330
AfaI GTAC 6 cut(s) 372, 406, 445, 865, 942, 1192
AfiI CCNNNNNNNGG 4 cut(s) 766, 1089, 1147, 1236
AgsI TTSAA 8 cut(s) 52, 243, 346, 664, 691, 727, 892, 1063
AhlI ACTAGT 1 cut(s) 805
AleI CACNNNNGTG 1 cut(s) 439
AluBI AGCT 8 cut(s) 16, 175, 399, 513, 550, 1044, 1162, 1233
AluI AGCT 8 cut(s) 16, 175, 399, 513, 550, 1044, 1162, 1233
Alw21I GWGCWC 2 cut(s) 616, 1289
Alw26I GTCTC 1 cut(s) 768
AlwI GGATC 4 cut(s) 276, 556, 922, 1132
Ama87I CYCGRG 2 cut(s) 923, 1282
AoxI GGCC 4 cut(s) 67, 469, 841, 1155
ApeKI GCWGC 6 cut(s) 10, 13, 172, 513, 651, 1204
ApoI RAATTY 2 cut(s) 146, 489
AseI ATTAAT 1 cut(s) 752
Asp700I GAANNNNTTC 1 cut(s) 722
AspLEI GCGC 2 cut(s) 172, 1204
AspS9I GGNCC 7 cut(s) 113, 428, 470, 800, 842, 1156, 1239
AsuC2I CCSGG 1 cut(s) 1144
AsuHPI GGTGA 2 cut(s) 1147, 1156
AvaI CYCGRG 2 cut(s) 923, 1282
AvaII GGWCC 4 cut(s) 113, 428, 800, 1239
BaeGI GKGCMC 1 cut(s) 280
BanI GGYRCC 1 cut(s) 822
BauI CACGAG 3 cut(s) 555, 615, 740
Bbv12I GWGCWC 2 cut(s) 616, 1289
BbvI GCAGC 6 cut(s) 22, 25, 184, 500, 663, 1191
BccI CCATC 1 cut(s) 812
BceAI ACGGC 1 cut(s) 54
BcnI CCSGG 1 cut(s) 1144
BcoDI GTCTC 1 cut(s) 768
BcuI ACTAGT 1 cut(s) 805
BfaI CTAG 4 cut(s) 110, 474, 806, 846
BfmI CTRYAG 4 cut(s) 121, 298, 1039, 1218
BisI GCNGC 8 cut(s) 11, 14, 67, 173, 514, 652, 655, 1205
BlsI GCNGC 8 cut(s) 12, 15, 68, 174, 515, 653, 656, 1206
BmcAI AGTACT 2 cut(s) 406, 1192
Bme1390I CCNGG 1 cut(s) 1144
Bme18I GGWCC 4 cut(s) 113, 428, 800, 1239
BmeT110I CYCGRG 2 cut(s) 923, 1282
BmgT120I GGNCC 7 cut(s) 113, 428, 470, 800, 842, 1156, 1239
BmiI GGNNCC 3 cut(s) 429, 824, 1240
BmrFI CCNGG 1 cut(s) 1144
BmrI ACTGGG 2 cut(s) 456, 932
BmuI ACTGGG 2 cut(s) 456, 932
BpmI CTGGAG 2 cut(s) 176, 1215
BpuEI CTTGAG 2 cut(s) 421, 1285
BpuMI CCSGG 1 cut(s) 1144
BsaHI GRCGYC 1 cut(s) 330
BsaJI CCNNGG 3 cut(s) 179, 466, 1142
BsaXI ACNNNNNCTCC 2 cut(s) 1067, 1097
Bsc4I CCNNNNNNNGG 4 cut(s) 766, 1089, 1147, 1236
Bse1I ACTGG 4 cut(s) 77, 451, 938, 1198
BseDI CCNNGG 3 cut(s) 179, 466, 1142
BseGI GGATG 4 cut(s) 37, 518, 745, 952
BseLI CCNNNNNNNGG 4 cut(s) 766, 1089, 1147, 1236
BseNI ACTGG 4 cut(s) 77, 451, 938, 1198
BseRI GAGGAG 1 cut(s) 786
BseSI GKGCMC 1 cut(s) 280
BseX3I CGGCCG 1 cut(s) 67
BseXI GCAGC 6 cut(s) 22, 25, 184, 500, 663, 1191
BseYI CCCAGC 1 cut(s) 1158
BsgI GTGCAG 1 cut(s) 930
Bsh1236I CGCG 2 cut(s) 873, 1202
Bsh1285I CGRYCG 1 cut(s) 70
BshFI GGCC 4 cut(s) 69, 471, 843, 1157
BshNI GGYRCC 1 cut(s) 822
BsiEI CGRYCG 1 cut(s) 70
BsiHKAI GWGCWC 2 cut(s) 616, 1289
BsiHKCI CYCGRG 2 cut(s) 923, 1282
BsiSI CCGG 1 cut(s) 1144
BslFI GGGAC 1 cut(s) 441
BslI CCNNNNNNNGG 4 cut(s) 766, 1089, 1147, 1236
BsmAI GTCTC 1 cut(s) 768
BsmBI CGTCTC 1 cut(s) 768
BsmFI GGGAC 1 cut(s) 441
BsnI GGCC 4 cut(s) 69, 471, 843, 1157
BsoBI CYCGRG 2 cut(s) 923, 1282
Bsp1286I GDGCHC 3 cut(s) 280, 616, 1289
Bsp143I GATC 4 cut(s) 281, 561, 927, 1137
BspACI CCGC 6 cut(s) 66, 580, 655, 873, 956, 1036
BspANI GGCC 4 cut(s) 69, 471, 843, 1157
BspFNI CGCG 2 cut(s) 873, 1202
BspHI TCATGA 1 cut(s) 1117
BspLI GGNNCC 3 cut(s) 429, 824, 1240
BspPI GGATC 4 cut(s) 276, 556, 922, 1132
BspT107I GGYRCC 1 cut(s) 822
BsrI ACTGG 4 cut(s) 77, 451, 938, 1198
BssECI CCNNGG 3 cut(s) 179, 466, 1142
BssMI GATC 4 cut(s) 281, 561, 927, 1137
BssNI GRCGYC 1 cut(s) 330
BssSI CACGAG 3 cut(s) 555, 615, 740
BssT1I CCWWGG 2 cut(s) 179, 466
Bst2BI CACGAG 3 cut(s) 555, 615, 740
Bst4CI ACNGT 7 cut(s) 125, 365, 629, 671, 947, 1079, 1135
Bst6I CTCTTC 1 cut(s) 417
BstACI GRCGYC 1 cut(s) 330
BstAPI GCANNNNNTGC 3 cut(s) 202, 574, 648
BstC8I GCNNGC 3 cut(s) 212, 1015, 1231
BstDEI CTNAG 1 cut(s) 454
BstF5I GGATG 4 cut(s) 37, 518, 745, 952
BstFNI CGCG 2 cut(s) 873, 1202
BstHHI GCGC 2 cut(s) 172, 1204
BstKTI GATC 4 cut(s) 284, 564, 930, 1140
BstMAI GTCTC 1 cut(s) 768
BstMBI GATC 4 cut(s) 281, 561, 927, 1137
BstMCI CGRYCG 1 cut(s) 70
BstMWI GCNNNNNNNGC 7 cut(s) 202, 211, 275, 574, 648, 822, 1035
BstNSI RCATGY 2 cut(s) 96, 392
BstSCI CCNGG 1 cut(s) 1142
BstSFI CTRYAG 4 cut(s) 121, 298, 1039, 1218
BstSLI GKGCMC 1 cut(s) 280
BstUI CGCG 2 cut(s) 873, 1202
BstV1I GCAGC 6 cut(s) 22, 25, 184, 500, 663, 1191
BstX2I RGATCY 2 cut(s) 561, 927
BstXI CCANNNNNNTGG 1 cut(s) 839
BstYI RGATCY 2 cut(s) 561, 927
BstZI CGGCCG 1 cut(s) 67
BsuRI GGCC 4 cut(s) 69, 471, 843, 1157
BtgZI GCGATG 2 cut(s) 114, 831
BtsCI GGATG 4 cut(s) 37, 518, 745, 952
BtsI GCAGTG 1 cut(s) 111
BtsIMutI CAGTG 4 cut(s) 111, 625, 943, 1107
Cac8I GCNNGC 3 cut(s) 212, 1015, 1231
CciI TCATGA 1 cut(s) 1117
CfoI GCGC 2 cut(s) 172, 1204
Cfr13I GGNCC 7 cut(s) 113, 428, 470, 800, 842, 1156, 1239
Csp6I GTAC 6 cut(s) 371, 405, 444, 864, 941, 1191
CspCI CAANNNNNGTGG 2 cut(s) 420, 455
CviAII CATG 8 cut(s) 84, 93, 165, 312, 389, 906, 1005, 1118
CviQI GTAC 6 cut(s) 371, 405, 444, 864, 941, 1191
DdeI CTNAG 1 cut(s) 454
DpnI GATC 4 cut(s) 283, 563, 929, 1139
DpnII GATC 4 cut(s) 281, 561, 927, 1137
EaeI YGGCCR 1 cut(s) 67
EagI CGGCCG 1 cut(s) 67
Eam1104I CTCTTC 1 cut(s) 417
EarI CTCTTC 1 cut(s) 417
EclXI CGGCCG 1 cut(s) 67
Eco130I CCWWGG 2 cut(s) 179, 466
Eco47I GGWCC 4 cut(s) 113, 428, 800, 1239
Eco52I CGGCCG 1 cut(s) 67
Eco57I CTGAAG 1 cut(s) 441
Eco88I CYCGRG 2 cut(s) 923, 1282
EcoO109I RGGNCCY 1 cut(s) 113
EcoT14I CCWWGG 2 cut(s) 179, 466
ErhI CCWWGG 2 cut(s) 179, 466
Esp3I CGTCTC 1 cut(s) 768
FaeI CATG 8 cut(s) 87, 96, 168, 315, 392, 909, 1008, 1121
FaqI GGGAC 1 cut(s) 441
FatI CATG 8 cut(s) 83, 92, 164, 311, 388, 905, 1004, 1117
FauNDI CATATG 1 cut(s) 1052
FblI GTMKAC 1 cut(s) 73
Fnu4HI GCNGC 8 cut(s) 11, 14, 67, 173, 514, 652, 655, 1205
FokI GGATG 4 cut(s) 24, 505, 732, 939
Fsp4HI GCNGC 8 cut(s) 11, 14, 67, 173, 514, 652, 655, 1205
FspBI CTAG 4 cut(s) 110, 474, 806, 846
FspI TGCGCA 1 cut(s) 171
GlaI GCGC 2 cut(s) 171, 1203
GluI GCNGC 8 cut(s) 11, 14, 67, 173, 514, 652, 655, 1205
GsaI CCCAGC 1 cut(s) 1162
GsuI CTGGAG 2 cut(s) 176, 1215
HaeIII GGCC 4 cut(s) 69, 471, 843, 1157
HapII CCGG 1 cut(s) 1144
HhaI GCGC 2 cut(s) 172, 1204
Hin1I GRCGYC 1 cut(s) 330
Hin1II CATG 8 cut(s) 87, 96, 168, 315, 392, 909, 1008, 1121
Hin6I GCGC 2 cut(s) 170, 1202
HinP1I GCGC 2 cut(s) 170, 1202
HincII GTYRAC 1 cut(s) 950
HindII GTYRAC 1 cut(s) 950
HinfI GANTC 4 cut(s) 620, 660, 1112, 1197
HpaII CCGG 1 cut(s) 1144
HphI GGTGA 2 cut(s) 1147, 1156
Hpy166II GTNNAC 6 cut(s) 74, 444, 803, 943, 950, 1131
Hpy188I TCNGA 5 cut(s) 231, 353, 421, 680, 715
Hpy188III TCNNGA 7 cut(s) 243, 499, 557, 740, 760, 925, 1118
Hpy8I GTNNAC 6 cut(s) 74, 444, 803, 943, 950, 1131
Hpy99I CGWCG 1 cut(s) 332
HpyAV CCTTC 4 cut(s) 46, 301, 757, 1141
HpyCH4III ACNGT 7 cut(s) 125, 365, 629, 671, 947, 1079, 1135
HpyCH4IV ACGT 2 cut(s) 330, 1178
HpyF10VI GCNNNNNNNGC 7 cut(s) 202, 211, 275, 574, 648, 822, 1035
HpyF3I CTNAG 1 cut(s) 454
HpySE526I ACGT 2 cut(s) 330, 1178
Hsp92I GRCGYC 1 cut(s) 330
Hsp92II CATG 8 cut(s) 87, 96, 168, 315, 392, 909, 1008, 1121
HspAI GCGC 2 cut(s) 170, 1202
Kzo9I GATC 4 cut(s) 281, 561, 927, 1137
LmnI GCTCC 2 cut(s) 195, 611
Lsp1109I GCAGC 6 cut(s) 22, 25, 184, 500, 663, 1191
MaeI CTAG 4 cut(s) 110, 474, 806, 846
MaeII ACGT 2 cut(s) 330, 1178
MaeIII GTNAC 6 cut(s) 29, 380, 683, 737, 848, 1174
MalI GATC 4 cut(s) 283, 563, 929, 1139
MboI GATC 4 cut(s) 281, 561, 927, 1137
MboII GAAGA 4 cut(s) 247, 434, 796, 956
MfeI CAATTG 2 cut(s) 975, 1087
MflI RGATCY 2 cut(s) 561, 927
MhlI GDGCHC 3 cut(s) 280, 616, 1289
MluCI AATT 7 cut(s) 146, 346, 489, 664, 975, 1087, 1098
MlyI GAGTC 1 cut(s) 1206
MmeI TCCRAC 1 cut(s) 955
MroXI GAANNNNTTC 1 cut(s) 722
MseI TTAA 6 cut(s) 18, 222, 752, 879, 993, 1306
MslI CAYNNNNRTG 3 cut(s) 387, 439, 630
MspA1I CMGCKG 1 cut(s) 1044
MspI CCGG 1 cut(s) 1144
MspR9I CCNGG 1 cut(s) 1144
MunI CAATTG 2 cut(s) 975, 1087
MvnI CGCG 2 cut(s) 873, 1202
MwoI GCNNNNNNNGC 7 cut(s) 202, 211, 275, 574, 648, 822, 1035
NciI CCSGG 1 cut(s) 1144
NdeI CATATG 1 cut(s) 1052
NdeII GATC 4 cut(s) 281, 561, 927, 1137
NlaIII CATG 8 cut(s) 87, 96, 168, 315, 392, 909, 1008, 1121
NlaIV GGNNCC 3 cut(s) 429, 824, 1240
NmuCI GTSAC 5 cut(s) 29, 380, 683, 737, 1174
NsbI TGCGCA 1 cut(s) 171
NspI RCATGY 2 cut(s) 96, 392
OliI CACNNNNGTG 1 cut(s) 439
PaeR7I CTCGAG 1 cut(s) 923
PagI TCATGA 1 cut(s) 1117
PdmI GAANNNNTTC 1 cut(s) 722
PfeI GAWTC 3 cut(s) 620, 660, 1112
PkrI GCNGC 8 cut(s) 12, 15, 68, 174, 515, 653, 656, 1206
PleI GAGTC 1 cut(s) 1205
PpsI GAGTC 1 cut(s) 1205
PpuMI RGGWCCY 1 cut(s) 113
PshBI ATTAAT 1 cut(s) 752
Psp5II RGGWCCY 1 cut(s) 113
PspFI CCCAGC 1 cut(s) 1158
PspN4I GGNNCC 3 cut(s) 429, 824, 1240
PspPI GGNCC 7 cut(s) 113, 428, 470, 800, 842, 1156, 1239
PspPPI RGGWCCY 1 cut(s) 113
PsuI RGATCY 2 cut(s) 561, 927
PvuII CAGCTG 1 cut(s) 1044
RsaI GTAC 6 cut(s) 372, 406, 445, 865, 942, 1192
RsaNI GTAC 6 cut(s) 371, 405, 444, 864, 941, 1191
RseI CAYNNNNRTG 3 cut(s) 387, 439, 630
SaqAI TTAA 6 cut(s) 18, 222, 752, 879, 993, 1306
SatI GCNGC 8 cut(s) 11, 14, 67, 173, 514, 652, 655, 1205
Sau3AI GATC 4 cut(s) 281, 561, 927, 1137
Sau96I GGNCC 7 cut(s) 113, 428, 470, 800, 842, 1156, 1239
ScaI AGTACT 2 cut(s) 406, 1192
SchI GAGTC 1 cut(s) 1206
ScrFI CCNGG 1 cut(s) 1144
SduI GDGCHC 3 cut(s) 280, 616, 1289
SfcI CTRYAG 4 cut(s) 121, 298, 1039, 1218
Sfr274I CTCGAG 1 cut(s) 923
SinI GGWCC 4 cut(s) 113, 428, 800, 1239
SlaI CTCGAG 1 cut(s) 923
SmiMI CAYNNNNRTG 3 cut(s) 387, 439, 630
SmlI CTYRAG 3 cut(s) 400, 923, 1300
SmoI CTYRAG 3 cut(s) 400, 923, 1300
SpeI ACTAGT 1 cut(s) 805
Sse9I AATT 7 cut(s) 146, 346, 489, 664, 975, 1087, 1098
SsiI CCGC 6 cut(s) 66, 580, 655, 873, 956, 1036
SspMI CTAG 4 cut(s) 110, 474, 806, 846
StyD4I CCNGG 1 cut(s) 1142
StyI CCWWGG 2 cut(s) 179, 466
TaaI ACNGT 7 cut(s) 125, 365, 629, 671, 947, 1079, 1135
TaiI ACGT 2 cut(s) 333, 1181
TaqI TCGA 7 cut(s) 141, 327, 498, 696, 924, 1104, 1268
TasI AATT 7 cut(s) 146, 346, 489, 664, 975, 1087, 1098
TatI WGTACW 6 cut(s) 370, 404, 443, 863, 940, 1190
TauI GCSGC 2 cut(s) 69, 657
TfiI GAWTC 3 cut(s) 620, 660, 1112
Tru1I TTAA 6 cut(s) 18, 222, 752, 879, 993, 1306
Tru9I TTAA 6 cut(s) 18, 222, 752, 879, 993, 1306
TscAI CASTG 4 cut(s) 111, 632, 950, 1114
TseFI GTSAC 5 cut(s) 29, 380, 683, 737, 1174
TseI GCWGC 6 cut(s) 10, 13, 172, 513, 651, 1204
Tsp45I GTSAC 5 cut(s) 29, 380, 683, 737, 1174
TspDTI ATGAA 3 cut(s) 72, 139, 1247
TspRI CASTG 4 cut(s) 111, 632, 950, 1114
VpaK11BI GGWCC 4 cut(s) 113, 428, 800, 1239
VspI ATTAAT 1 cut(s) 752
XapI RAATTY 2 cut(s) 146, 489
XceI RCATGY 2 cut(s) 96, 392
XhoI CTCGAG 1 cut(s) 923
XmiI GTMKAC 1 cut(s) 73
XmnI GAANNNNTTC 1 cut(s) 722
XspI CTAG 4 cut(s) 110, 474, 806, 846
ZraI GACGTC 1 cut(s) 331
ZrmI AGTACT 2 cut(s) 406, 1192
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.