Rmu_sc0006604.1_g000012

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006604.1
OG0000226
Physical Location & Seq
Forward (+)
62102 .. 65257
3156 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006604.1_g000012.1.cds

Sequence Viewer

Length: 3156 bp
atggatcagcttcaacatttcaatcacgtccatccattgacgtttaaagaaggggagcagaaaaatcaagatggtacagcagcagcagttggtccaccagttgtatgcactgcgtgtggggatcgagtgcacggtcccagctacagttgcaaccaatgttccaaatttattctccacaagtcgtgtgcggagttgccccgtgagatccagcacccgatccacaaccatccactaattctcctcccagatagatattacaattgtgatatttgtcgcaatcaccattctggcttattttcttacaaatgtgagccatgtgacttcgaccttgacctccaatgtgcttccaatctgagcaacataaaatacttgaaacacttcagtcatgagcatgcactgatctttgtggaagatccggaaagacgagagagaggccgtgtaccagttgtttgtcaagggtgccaagagcaagtgttgggtccagcctattgctgcagccggtatctttgccactacactctccataagtcatgtacggagatgccccttgagtttcgtcatccgaggcatacccaacacccacttattctcaacacagatagagcacaaaaatacctttgtgatgcgtgtaaccaagattgcagcgacaggttcacttacagttgcttccagtgtcacttcaaccttgaccctcaatgtactttcaatcggaccggctttaaacatttcagtcacttccatcgattgatgtttaaggaaggggagcagaaaaatgaagatggtgcagcagcagcaggtccaccagttgtatgcactgcatgtggggatctagtgcttggtcctagctacagttgcaaccaatgttctaaattcaatctccacaagtcgtgtgcggagttgccccgtgagatccgccacccaatacacaagcatcctctaattctcttcgccgatgatgaatattacgaaacttgtaatatttgtggcagagactgtgagggattatacttttacagttgtttggaatgcgacttcggccttgacatccaatgtgcttctaatttgagcaacattaaatatgcggaacacttcagtcatcgccatatattgatctttagggaagagcaggaaaagggagatgcaagtcaaccagttttatgtgatgggtgcggagaccaagtaactggtccaagttttagctgcagagcttgctcctacactcttcataaatcatgtgtggagctgcccctgcatcacccggtgcataccgatcactcacttaatctcaacagagatacaacacgagaatactgctgtgatgcctgtaaccaagattgccgcctcagattcacttacagttgcttcgagtgtgacttcaaccttgacctcaaatgttcttccgatcataatgccataaaacatttcatgcacgagcatgctttgatgtttaaggaagcgcaagatgaagaatatgttggtcctattgttgtttgtgatgggtgccaagatccagttcttggccctagttacacttgcatcaatagctatcgacgtcacaaatgtggattcaatctccacaaatcatgtgcagagctagagcgtaaaatccagcaccccatgcaccgccaacactctcttttgctttcaaatcctactgaaaatatcgaagtaccttgcctttgttatgcctgcaagaaaacttgcggattccgttacaactgttccgtatgtgatttcaaccttgatctcaaatgtgcctccaattggaaaaacattattgggaacgactctcacaagcatcagttcaccgttcttctcatgaaggaaatggctgaactccaccttacttgtgacgtttgtggggagtacaagcactggagtggcaccgtctactacatctgtagcatctgccaactcttggtccataaggagtgtgcttcattacgacacaacatcaaattttctgggcatcaacaacatcgcctcaagctaatctggttcgttgaagacacttaccccaagcatctattttgtaaagtctgctccacaggtattgataaatgtcgcgctgtttattcttgccatgaaggttgcgattatgttgttcacattgcatgcacaatcggtgactattttggcaaaaaagaaaaattcggcacagatctatttgatgctaagattataaaaaaagatgcagaattcaagcacttcagtcatcaacataaactaacagcccagaatcctcgtgataaagatgaccatagaagaatcatttgtgagggttgcatccgacccatcactatcctcacaaattccttttatagctgtaaagagtcttgttgctttttctttctccatccagtctgtgctcagttacctaaaaaactgcttctccgactagttcactcacacaagttcacactcctcccacgagttccttctattgacggcgtgtttcagtgttatatgtgccgcaccttcagccaaggctttgcatacaattgtgaggaatgcacaggcaaaaatgttatctacaatattgaccttcagtgcattgtatattgggagaataaggctcttaaacatgactctcacgttcactggctcctcatcaacacagaatgggacgtctattgcagcggttgtggttccaaattttttttcttctttagttgtaagagatgcaatttccatctctgtatatcatgcgttaagttacctcttaccgctaagcaccgatacgacgatcatcctctcaatctcacatatgctagtgacgaagatgagctgggttactattgtgaaatatgcgagggaaaaagagatcgaacacattggttctaccgctgcaaggattgtgactttgattgccatactcattgcattttagggaggtatccgcaagtcaagctagggagcacttacaagcacgatgctcatggtcaacacctcgtcacccttgttgataagtcaaagagccccattcctttggataagaaagacaatattcttccctgcgagaagtgtggaaaaccttgtgaaggattggtgtttgaatgtgaagagtgcaatataagtatccaccgagaaggatgttgtcaggtgacagatttggagagttctgtcaagtctccaaagaagagctcaggcaaatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

1051

Amino Acids

121.11

Weight (kDa)

6.85

Isoelectric Point (pI)

48.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2183
AatII GACGTC 2 cut(s) 1555, 2631
Acc36I ACCTGC 1 cut(s) 785
AccB1I GGYRCC 3 cut(s) 459, 1500, 1883
AccB7I CCANNNNNTGG 2 cut(s) 1517, 1918
AccI GTMKAC 1 cut(s) 1890
AccII CGCG 1 cut(s) 2067
AccIII TCCGGA 1 cut(s) 415
AclWI GGATC 8 cut(s) 12, 129, 199, 211, 407, 834, 904, 1502
AcsI RAATTY 7 cut(s) 164, 869, 1958, 2150, 2198, 2311, 2654
AcuI CTGAAG 5 cut(s) 364, 1075, 2194, 2464, 2531
AcyI GRCGYC 2 cut(s) 1552, 2628
AdeI CACNNNGTG 2 cut(s) 114, 1261
AfaI GTAC 6 cut(s) 76, 441, 535, 700, 1671, 1868
AfiI CCNNNNNNNGG 5 cut(s) 1517, 1764, 1918, 2851, 3041
AhlI ACTAGT 1 cut(s) 2398
AjiI CACGTC 1 cut(s) 28
AjuI GAANNNNNNNTTGG 6 cut(s) 1458, 1490, 1497, 1529, 2645, 2677
AleI CACNNNNGTG 2 cut(s) 1560, 1878
Alw21I GWGCWC 5 cut(s) 132, 607, 2371, 2921, 3146
Alw26I GTCTC 3 cut(s) 984, 1167, 3135
Alw44I GTGCAC 1 cut(s) 128
AlwI GGATC 8 cut(s) 12, 129, 199, 211, 407, 834, 904, 1502
AlwNI CAGNNNCTG 1 cut(s) 993
Aor13HI TCCGGA 1 cut(s) 415
AoxI GGCC 3 cut(s) 433, 1036, 1519
ApaLI GTGCAC 1 cut(s) 128
ApoI RAATTY 7 cut(s) 164, 869, 1958, 2150, 2198, 2311, 2654
Asp700I GAANNNNTTC 1 cut(s) 377
AspLEI GCGC 2 cut(s) 1459, 2069
AsuC2I CCSGG 1 cut(s) 1259
AsuHPI GGTGA 6 cut(s) 272, 1247, 1798, 2138, 2947, 3115
AvaII GGWCC 9 cut(s) 92, 134, 479, 711, 797, 839, 1187, 1478, 1921
BaeGI GKGCMC 1 cut(s) 132
BanI GGYRCC 3 cut(s) 459, 1500, 1883
BanII GRGCYC 2 cut(s) 2981, 3146
BauI CACGAG 4 cut(s) 1302, 1430, 2244, 2430
BbsI GAAGAC 1 cut(s) 2013
Bbv12I GWGCWC 5 cut(s) 132, 607, 2371, 2921, 3146
BceAI ACGGC 2 cut(s) 420, 2464
BcgI CGANNNNNNTGC 4 cut(s) 1293, 1327, 1391, 1425
BciVI GTATCC 2 cut(s) 2907, 3089
BcnI CCSGG 1 cut(s) 1259
BcoDI GTCTC 3 cut(s) 984, 1167, 3135
BcuI ACTAGT 1 cut(s) 2398
BfaI CTAG 7 cut(s) 830, 843, 1524, 1595, 2399, 2772, 2912
BfmI CTRYAG 5 cut(s) 142, 493, 847, 1201, 1900
BfuAI ACCTGC 1 cut(s) 785
BfuI GTATCC 2 cut(s) 2907, 3089
BglII AGATCT 1 cut(s) 2161
BlpI GCTNAGC 1 cut(s) 2730
Bme1390I CCNGG 1 cut(s) 1259
Bme18I GGWCC 9 cut(s) 92, 134, 479, 711, 797, 839, 1187, 1478, 1921
BmgBI CACGTC 1 cut(s) 28
BmiI GGNNCC 7 cut(s) 136, 461, 480, 1502, 1885, 2606, 2650
BmrFI CCNGG 1 cut(s) 1259
BpiI GAAGAC 1 cut(s) 2013
BpmI CTGGAG 1 cut(s) 1897
Bpu10I CCTNAGC 1 cut(s) 3145
Bpu1102I GCTNAGC 1 cut(s) 2730
BpuEI CTTGAG 2 cut(s) 569, 1970
BpuMI CCSGG 1 cut(s) 1259
Bsa29I ATCGAT 1 cut(s) 742
BsaHI GRCGYC 2 cut(s) 1552, 2628
BsaI GGTCTC 1 cut(s) 1167
BsaJI CCNNGG 2 cut(s) 563, 2485
BsaWI WCCGGW 1 cut(s) 415
BsaXI ACNNNNNCTCC 6 cut(s) 222, 252, 1164, 1194, 2376, 2406
Bsc4I CCNNNNNNNGG 5 cut(s) 1517, 1764, 1918, 2851, 3041
Bse118I RCCGGY 2 cut(s) 498, 713
Bse3DI GCAATG 2 cut(s) 2109, 2878
BseAI TCCGGA 1 cut(s) 415
BseCI ATCGAT 1 cut(s) 742
BseDI CCNNGG 2 cut(s) 563, 2485
BseGI GGATG 9 cut(s) 31, 226, 559, 931, 1044, 2286, 2356, 2749, 3098
BseLI CCNNNNNNNGG 5 cut(s) 1517, 1764, 1918, 2851, 3041
BseMI GCAATG 2 cut(s) 2109, 2878
BseMII CTCAG 3 cut(s) 344, 1357, 2384
BseRI GAGGAG 3 cut(s) 230, 2414, 2597
BseSI GKGCMC 1 cut(s) 132
BseYI CCCAGC 2 cut(s) 137, 2788
BsgI GTGCAG 2 cut(s) 804, 1608
Bsh1236I CGCG 1 cut(s) 2067
BshFI GGCC 3 cut(s) 435, 1038, 1521
BshNI GGYRCC 3 cut(s) 459, 1500, 1883
BshVI ATCGAT 1 cut(s) 742
BsiHKAI GWGCWC 5 cut(s) 132, 607, 2371, 2921, 3146
BsiSI CCGG 4 cut(s) 416, 499, 714, 1259
BslFI GGGAC 2 cut(s) 120, 2639
BslI CCNNNNNNNGG 5 cut(s) 1517, 1764, 1918, 2851, 3041
BsmAI GTCTC 3 cut(s) 984, 1167, 3135
BsmFI GGGAC 2 cut(s) 120, 2639
BsmI GAATGC 2 cut(s) 1031, 2516
BsnI GGCC 3 cut(s) 435, 1038, 1521
Bso31I GGTCTC 1 cut(s) 1167
Bsp1286I GDGCHC 6 cut(s) 132, 607, 2371, 2921, 2981, 3146
Bsp13I TCCGGA 1 cut(s) 415
Bsp1720I GCTNAGC 1 cut(s) 2730
BspANI GGCC 3 cut(s) 435, 1038, 1521
BspCNI CTCAG 3 cut(s) 345, 1356, 2383
BspDI ATCGAT 1 cut(s) 742
BspEI TCCGGA 1 cut(s) 415
BspFNI CGCG 1 cut(s) 2067
BspHI TCATGA 2 cut(s) 385, 1818
BspLI GGNNCC 7 cut(s) 136, 461, 480, 1502, 1885, 2606, 2650
BspMAI CTGCAG 2 cut(s) 497, 1205
BspMI ACCTGC 1 cut(s) 785
BspPI GGATC 8 cut(s) 12, 129, 199, 211, 407, 834, 904, 1502
BspQI GCTCTTC 2 cut(s) 1116, 3134
BspT107I GGYRCC 3 cut(s) 459, 1500, 1883
BspTNI GGTCTC 1 cut(s) 1167
BsrDI GCAATG 2 cut(s) 2109, 2878
BsrFI RCCGGY 2 cut(s) 498, 713
BssAI RCCGGY 2 cut(s) 498, 713
BssECI CCNNGG 2 cut(s) 563, 2485
BssNI GRCGYC 2 cut(s) 1552, 2628
BssSI CACGAG 4 cut(s) 1302, 1430, 2244, 2430
BssT1I CCWWGG 1 cut(s) 2485
Bst2BI CACGAG 4 cut(s) 1302, 1430, 2244, 2430
Bst6I CTCTTC 5 cut(s) 950, 1116, 1227, 3057, 3134
BstACI GRCGYC 2 cut(s) 1552, 2628
BstAPI GCANNNNNTGC 2 cut(s) 1209, 1618
BstC8I GCNNGC 5 cut(s) 393, 1210, 1437, 1690, 2116
BstDEI CTNAG 6 cut(s) 353, 1343, 2175, 2370, 2730, 3145
BstENI CCTNNNNNAGG 1 cut(s) 3039
BstF5I GGATG 9 cut(s) 31, 226, 559, 931, 1044, 2286, 2356, 2749, 3098
BstFNI CGCG 1 cut(s) 2067
BstHHI GCGC 2 cut(s) 1459, 2069
BstMAI GTCTC 3 cut(s) 984, 1167, 3135
BstNSI RCATGY 4 cut(s) 395, 822, 1439, 2118
BstSCI CCNGG 1 cut(s) 1257
BstSFI CTRYAG 5 cut(s) 142, 493, 847, 1201, 1900
BstSLI GKGCMC 1 cut(s) 132
BstUI CGCG 1 cut(s) 2067
BstV2I GAAGAC 1 cut(s) 2013
BstX2I RGATCY 6 cut(s) 204, 412, 826, 909, 1507, 2161
BstXI CCANNNNNNTGG 2 cut(s) 1184, 2989
BstYI RGATCY 6 cut(s) 204, 412, 826, 909, 1507, 2161
Bsu15I ATCGAT 1 cut(s) 742
BsuI GTATCC 2 cut(s) 2907, 3089
BsuRI GGCC 3 cut(s) 435, 1038, 1521
BsuTUI ATCGAT 1 cut(s) 742
BtgZI GCGATG 2 cut(s) 1082, 1964
BtrI CACGTC 1 cut(s) 28
BtsCI GGATG 9 cut(s) 31, 226, 559, 931, 1044, 2286, 2356, 2749, 3098
BtsI GCAGTG 2 cut(s) 108, 813
BtsIMutI CAGTG 8 cut(s) 108, 395, 677, 813, 1873, 2465, 2555, 2599
BveI ACCTGC 1 cut(s) 785
Cac8I GCNNGC 5 cut(s) 393, 1210, 1437, 1690, 2116
CaiI CAGNNNCTG 1 cut(s) 993
CciI TCATGA 2 cut(s) 385, 1818
CfoI GCGC 2 cut(s) 1459, 2069
Cfr10I RCCGGY 2 cut(s) 498, 713
ClaI ATCGAT 1 cut(s) 742
CpoI CGGWCCG 1 cut(s) 711
Csp6I GTAC 6 cut(s) 75, 440, 534, 699, 1670, 1867
CspCI CAANNNNNGTGG 4 cut(s) 1829, 1864, 2035, 2070
CspI CGGWCCG 1 cut(s) 711
CviQI GTAC 6 cut(s) 75, 440, 534, 699, 1670, 1867
DdeI CTNAG 6 cut(s) 353, 1343, 2175, 2370, 2730, 3145
DraI TTTAAA 2 cut(s) 46, 721
DraIII CACNNNGTG 2 cut(s) 114, 1261
Eam1104I CTCTTC 5 cut(s) 950, 1116, 1227, 3057, 3134
EarI CTCTTC 5 cut(s) 950, 1116, 1227, 3057, 3134
EciI GGCGGA 1 cut(s) 902
Ecl136II GAGCTC 1 cut(s) 3144
Eco130I CCWWGG 1 cut(s) 2485
Eco24I GRGCYC 2 cut(s) 2981, 3146
Eco31I GGTCTC 1 cut(s) 1167
Eco47I GGWCC 9 cut(s) 92, 134, 479, 711, 797, 839, 1187, 1478, 1921
Eco53kI GAGCTC 1 cut(s) 3144
Eco57I CTGAAG 5 cut(s) 364, 1075, 2194, 2464, 2531
EcoICRI GAGCTC 1 cut(s) 3144
EcoNI CCTNNNNNAGG 1 cut(s) 3039
EcoRI GAATTC 1 cut(s) 2198
EcoT14I CCWWGG 1 cut(s) 2485
EcoT38I GRGCYC 2 cut(s) 2981, 3146
ErhI CCWWGG 1 cut(s) 2485
FaqI GGGAC 2 cut(s) 120, 2639
FauNDI CATATG 1 cut(s) 2767
FblI GTMKAC 1 cut(s) 1890
FokI GGATG 9 cut(s) 18, 213, 546, 918, 1031, 2273, 2343, 2736, 3105
FriOI GRGCYC 2 cut(s) 2981, 3146
FspBI CTAG 7 cut(s) 830, 843, 1524, 1595, 2399, 2772, 2912
GlaI GCGC 2 cut(s) 1458, 2068
GsaI CCCAGC 2 cut(s) 141, 2792
GsuI CTGGAG 1 cut(s) 1897
HaeIII GGCC 3 cut(s) 435, 1038, 1521
HapII CCGG 4 cut(s) 416, 499, 714, 1259
HhaI GCGC 2 cut(s) 1459, 2069
Hin1I GRCGYC 2 cut(s) 1552, 2628
Hin6I GCGC 2 cut(s) 1457, 2067
HinP1I GCGC 2 cut(s) 1457, 2067
HincII GTYRAC 2 cut(s) 1148, 2945
HindII GTYRAC 2 cut(s) 1148, 2945
HinfI GANTC 8 cut(s) 1347, 1566, 1707, 1787, 2239, 2268, 2333, 2588
HpaII CCGG 4 cut(s) 416, 499, 714, 1259
HphI GGTGA 6 cut(s) 272, 1247, 1798, 2138, 2947, 3115
Hpy188I TCNGA 7 cut(s) 354, 564, 711, 1346, 1402, 2291, 2396
Hpy188III TCNNGA 5 cut(s) 68, 386, 416, 1819, 2246
Hpy99I CGWCG 2 cut(s) 1554, 2747
HpyAV CCTTC 9 cut(s) 44, 752, 1816, 2081, 2448, 2488, 2555, 3035, 3083
HpyCH4IV ACGT 6 cut(s) 27, 41, 1552, 1854, 2595, 2628
HpyF3I CTNAG 6 cut(s) 353, 1343, 2175, 2370, 2730, 3145
HpySE526I ACGT 6 cut(s) 27, 41, 1552, 1854, 2595, 2628
Hsp92I GRCGYC 2 cut(s) 1552, 2628
HspAI GCGC 2 cut(s) 1457, 2067
Kpn2I TCCGGA 1 cut(s) 415
LguI GCTCTTC 2 cut(s) 1116, 3134
LmnI GCTCC 7 cut(s) 55, 763, 1217, 1240, 2048, 2610, 2916
MaeI CTAG 7 cut(s) 830, 843, 1524, 1595, 2399, 2772, 2912
MaeII ACGT 6 cut(s) 27, 41, 1552, 1854, 2595, 2628
MfeI CAATTG 3 cut(s) 259, 1762, 2500
MflI RGATCY 6 cut(s) 204, 412, 826, 909, 1507, 2161
MhlI GDGCHC 6 cut(s) 132, 607, 2371, 2921, 2981, 3146
MlyI GAGTC 3 cut(s) 1781, 2342, 2582
MmeI TCCRAC 2 cut(s) 2314, 2419
MroI TCCGGA 1 cut(s) 415
MroXI GAANNNNTTC 1 cut(s) 377
MseI TTAA 8 cut(s) 45, 720, 753, 1074, 1281, 1449, 2580, 2712
MslI CAYNNNNRTG 4 cut(s) 390, 1434, 1560, 1878
MspA1I CMGCKG 2 cut(s) 2640, 2847
MspI CCGG 4 cut(s) 416, 499, 714, 1259
MspR9I CCNGG 1 cut(s) 1259
MunI CAATTG 3 cut(s) 259, 1762, 2500
Mva1269I GAATGC 2 cut(s) 1031, 2516
MvnI CGCG 1 cut(s) 2067
NciI CCSGG 1 cut(s) 1259
NdeI CATATG 1 cut(s) 2767
NlaIV GGNNCC 7 cut(s) 136, 461, 480, 1502, 1885, 2606, 2650
NspI RCATGY 4 cut(s) 395, 822, 1439, 2118
OliI CACNNNNGTG 2 cut(s) 1560, 1878
PaeI GCATGC 3 cut(s) 395, 1439, 2118
PagI TCATGA 2 cut(s) 385, 1818
PciSI GCTCTTC 2 cut(s) 1116, 3134
PctI GAATGC 2 cut(s) 1031, 2516
PdmI GAANNNNTTC 1 cut(s) 377
PfeI GAWTC 5 cut(s) 1347, 1566, 1707, 2239, 2268
PflMI CCANNNNNTGG 2 cut(s) 1517, 1918
PleI GAGTC 3 cut(s) 1781, 2341, 2582
PpsI GAGTC 3 cut(s) 1781, 2341, 2582
PsiI TTATAA 1 cut(s) 2183
Psp124BI GAGCTC 1 cut(s) 3146
PspFI CCCAGC 2 cut(s) 137, 2788
PspN4I GGNNCC 7 cut(s) 136, 461, 480, 1502, 1885, 2606, 2650
PstI CTGCAG 2 cut(s) 497, 1205
PstNI CAGNNNCTG 1 cut(s) 993
PsuI RGATCY 6 cut(s) 204, 412, 826, 909, 1507, 2161
RsaI GTAC 6 cut(s) 76, 441, 535, 700, 1671, 1868
RsaNI GTAC 6 cut(s) 75, 440, 534, 699, 1670, 1867
RseI CAYNNNNRTG 4 cut(s) 390, 1434, 1560, 1878
Rsr2I CGGWCCG 1 cut(s) 711
RsrII CGGWCCG 1 cut(s) 711
SacI GAGCTC 1 cut(s) 3146
SapI GCTCTTC 2 cut(s) 1116, 3134
SaqAI TTAA 8 cut(s) 45, 720, 753, 1074, 1281, 1449, 2580, 2712
SchI GAGTC 3 cut(s) 1781, 2342, 2582
ScrFI CCNGG 1 cut(s) 1259
SduI GDGCHC 6 cut(s) 132, 607, 2371, 2921, 2981, 3146
SfcI CTRYAG 5 cut(s) 142, 493, 847, 1201, 1900
SinI GGWCC 9 cut(s) 92, 134, 479, 711, 797, 839, 1187, 1478, 1921
SmiMI CAYNNNNRTG 4 cut(s) 390, 1434, 1560, 1878
SmlI CTYRAG 2 cut(s) 548, 1985
SmoI CTYRAG 2 cut(s) 548, 1985
SpeI ACTAGT 1 cut(s) 2398
SphI GCATGC 3 cut(s) 395, 1439, 2118
SspI AATATT 4 cut(s) 962, 979, 2539, 3007
SspMI CTAG 7 cut(s) 830, 843, 1524, 1595, 2399, 2772, 2912
SstI GAGCTC 1 cut(s) 3146
StyD4I CCNGG 1 cut(s) 1257
StyI CCWWGG 1 cut(s) 2485
TaiI ACGT 6 cut(s) 30, 44, 1555, 1857, 2598, 2631
TaqI TCGA 7 cut(s) 124, 324, 742, 1365, 1549, 1665, 2827
TatI WGTACW 2 cut(s) 698, 1866
TauI GCSGC 2 cut(s) 1341, 2475
TfiI GAWTC 5 cut(s) 1347, 1566, 1707, 2239, 2268
Tru1I TTAA 8 cut(s) 45, 720, 753, 1074, 1281, 1449, 2580, 2712
Tru9I TTAA 8 cut(s) 45, 720, 753, 1074, 1281, 1449, 2580, 2712
TscAI CASTG 8 cut(s) 115, 402, 677, 820, 1880, 2465, 2555, 2606
TspDTI ATGAA 8 cut(s) 789, 972, 1214, 1414, 1479, 1835, 1929, 2100
TspGWI ACGGA 3 cut(s) 551, 1700, 1714
TspRI CASTG 8 cut(s) 115, 402, 677, 820, 1880, 2465, 2555, 2606
Van91I CCANNNNNTGG 2 cut(s) 1517, 1918
VneI GTGCAC 1 cut(s) 128
VpaK11BI GGWCC 9 cut(s) 92, 134, 479, 711, 797, 839, 1187, 1478, 1921
XagI CCTNNNNNAGG 1 cut(s) 3039
XapI RAATTY 7 cut(s) 164, 869, 1958, 2150, 2198, 2311, 2654
XceI RCATGY 4 cut(s) 395, 822, 1439, 2118
XmiI GTMKAC 1 cut(s) 1890
XmnI GAANNNNTTC 1 cut(s) 377
XspI CTAG 7 cut(s) 830, 843, 1524, 1595, 2399, 2772, 2912
ZraI GACGTC 2 cut(s) 1553, 2629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.