AT5G44770

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000226
Physical Location & Seq
Forward (+)
18065012 .. 18066696
1685 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G44770.1

Sequence Viewer

Length: 1626 bp
ATGTCTAAACTCATGCTGCCGTTTCATGAGCATCCTATGACAATTTCGAACCTATACAACCATGCTTGCGATTTTTGCCCTGGAAGACCGAAACCTGGCACCATATTTTTTTGCGAGAAGTGCGACTTGGATCTGCACAAGGGATGTGCCGGCAAATTCCTCAACAACTCATCTCGCTGTAATCACTCTCTCAAGATTTTCCAAGGTAGGTTCGGACAGTTCGGTGAAGATGACGACTACCAATGCCATTATTGTCAACAAAATGTAGGATTTCATTTTGCTCGTTGCACGATATGCAACATAAGCATCGACGAAAAGTGTCTGCGAAATCCACCACCACTCACTATTTTCCAACCAAAGCACCACAAGCATAGCCTCTTCCTCTTGGGAAGACTAGTCGCATTTACTTGTAATGCATGTGGTGTGGAAGGCGACCGCAATCCTTATATATGTATTGAATGCAATCTGATGCTCCACAAAGAGTGTACTGATCTACCAAGGGTCATAAGCATAAATCGTCATGAGCATCGCATATCTCATACCTTTCATCTTGGCAAAGGAGAAGGCGTTTGGGAGTGTGGAGTTTGTCGGAAGACGATTGATTGTGTCTATGGAGCTTTTATATGCTCTCGCTGTCCCAGTAGTTATGCTGTTCATTCAAGATGTGCAACAAGAAAAGAAGTATGGGATGGGATAGAACTCGAAGATGTGCCAGAAGAAGATGAAGAACTCGAAGATCCATTCAAGGTAATTAATGAAAAAGGAGATATTGTTCATTTTAGTCATGAAGAACACGTTCTCAGATTGGATGTGAATTATGTTCATGATAATGATACTATGTGCTGTGGAGGTTGTATTCTTCCCATCAATGATGATCCATGCTACAAGTGCGTGGAATGTGATTTCTGCCTTCACAAAGGATGTGCTAGTCTTCCTCGAAAGAAAGCCCATTTTTTGCACAACCATAAAATTAGCCTACGGGCTCATAAGGATGACGTTTATGTAGATAAATGCGGAGCTTGTAAAACTTATTCTAATGGTTTCAAGTACGAGTGTCACGACAAAAGCAGCTGTAGAGGTAATATAAAGTATGATATCCGTTGTAGCTCCATATCAGAGCCGTTTCACCATGATGATCTGCATCCACATCCTTTATATTGGACCTTGGAAGAAACCAAACAGTGTAAGGCTTGTGGCACAGAGATACTTAAGCCTTTAAGTTGTTTGGTGTGTGAGTATGCTCTATGTATAAGGTGTGCTACTTTACCAAAAAAGGTAAAACATAGGTGTGATGATCACTTCTTGTCACTATGCCATGATGCTGGAAACTCGAGCGGTGACTTGTGGTGTGATATTTGTGAGACCAAGACCGATCCAAGTGTATGTTACTACACTTGTGATAAGTGTGGGGTCAGTCTCCATATTAATTGTGTACTAGGAGATTTATATTATACGAAGGTAGGACTCGTCTATCCTGGTCTTGAAGTACTTCCCAACAATGGTGCTACTCGACCTTTCTGCAACAGCTGTAAAGTTCGTTGCAAGTTCAGCTTCCTTATGAAGCAAACTCTAGGAGACCTTGTTCGTTACTTTTGTTCAATACGTTGTATTCCTAGAGCAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2

Protein Analysis

541

Amino Acids

61.72

Weight (kDa)

7.0

Isoelectric Point (pI)

43.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 120 - 162 1.7e-10 C1 domain
C1_2 PF03107 172 - 223 6.8e-07 C1 domain
C1_2 PF03107 260 - 309 2.7e-08 C1 domain
C1_2 PF03107 380 - 420 1.3e-06 C1 domain
C1_2 PF03107 429 - 478 7.2e-08 C1 domain
C1-like_CT PF22926 495 - 537 4.1e-14 C1 domain-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 98
AccBSI CCGCTC 1 cut(s) 1335
AciI CCGC 3 cut(s) 436, 1014, 1335
AclWI GGATC 4 cut(s) 138, 731, 869, 1367
AcsI RAATTY 1 cut(s) 155
AfaI GTAC 4 cut(s) 487, 1049, 1434, 1488
AfiI CCNNNNNNNGG 2 cut(s) 95, 1499
AflII CTTAAG 1 cut(s) 1208
AflIII ACRYGT 1 cut(s) 793
AgsI TTSAA 6 cut(s) 458, 660, 745, 1045, 1484, 1599
AhlI ACTAGT 1 cut(s) 394
AjnI CCWGG 3 cut(s) 79, 94, 1474
AjuI GAANNNNNNNTTGG 2 cut(s) 110, 142
AloI GAACNNNNNNTCC 4 cut(s) 756, 788, 1566, 1598
AluBI AGCT 6 cut(s) 617, 1019, 1071, 1107, 1527, 1551
AluI AGCT 6 cut(s) 617, 1019, 1071, 1107, 1527, 1551
Alw26I GTCTC 3 cut(s) 1355, 1421, 1569
AlwI GGATC 4 cut(s) 138, 731, 869, 1367
Ama87I CYCGRG 1 cut(s) 1330
ApeKI GCWGC 2 cut(s) 16, 1068
ApoI RAATTY 1 cut(s) 155
AseI ATTAAT 2 cut(s) 753, 1425
Asp700I GAANNNNTTC 2 cut(s) 795, 1488
AspS9I GGNCC 1 cut(s) 1161
AsuHPI GGTGA 3 cut(s) 236, 1118, 1349
AsuII TTCGAA 1 cut(s) 47
AvaI CYCGRG 1 cut(s) 1330
AvaII GGWCC 1 cut(s) 1161
BanI GGYRCC 1 cut(s) 98
BanII GRGCYC 1 cut(s) 985
BbsI GAAGAC 4 cut(s) 91, 397, 599, 923
BbvI GCAGC 2 cut(s) 3, 1080
BccI CCATC 2 cut(s) 683, 872
BceAI ACGGC 2 cut(s) 4, 1105
BcgI CGANNNNNNTGC 2 cut(s) 1500, 1534
BciT130I CCWGG 3 cut(s) 81, 96, 1476
BclI TGATCA 1 cut(s) 1294
BcoDI GTCTC 3 cut(s) 1355, 1421, 1569
BcuI ACTAGT 1 cut(s) 394
BfaI CTAG 5 cut(s) 395, 927, 1436, 1571, 1614
BfmI CTRYAG 1 cut(s) 1072
BfrI CTTAAG 1 cut(s) 1208
BisI GCNGC 2 cut(s) 17, 1069
BlsI GCNGC 2 cut(s) 18, 1070
BmcAI AGTACT 1 cut(s) 1488
Bme1390I CCNGG 3 cut(s) 81, 96, 1476
Bme18I GGWCC 1 cut(s) 1161
BmeT110I CYCGRG 1 cut(s) 1330
BmgT120I GGNCC 1 cut(s) 1161
BmiI GGNNCC 1 cut(s) 100
BmrFI CCNGG 3 cut(s) 81, 96, 1476
BmrI ACTGGG 1 cut(s) 633
BmsI GCATC 6 cut(s) 40, 315, 459, 535, 1150, 1309
BmuI ACTGGG 1 cut(s) 633
BpiI GAAGAC 4 cut(s) 91, 397, 599, 923
Bpu14I TTCGAA 1 cut(s) 47
BpuEI CTTGAG 1 cut(s) 176
BsaBI GATNNNNATC 1 cut(s) 1140
BsaI GGTCTC 2 cut(s) 1355, 1569
BsaJI CCNNGG 4 cut(s) 79, 202, 497, 1164
BsaXI ACNNNNNCTCC 6 cut(s) 552, 582, 756, 786, 1566, 1596
Bsc4I CCNNNNNNNGG 2 cut(s) 95, 1499
Bse118I RCCGGY 1 cut(s) 149
Bse1I ACTGG 1 cut(s) 639
Bse8I GATNNNNATC 1 cut(s) 1140
BseBI CCWGG 3 cut(s) 81, 96, 1476
BseDI CCNNGG 4 cut(s) 79, 202, 497, 1164
BseGI GGATG 8 cut(s) 31, 149, 694, 814, 926, 997, 1141, 1147
BseJI GATNNNNATC 1 cut(s) 1140
BseLI CCNNNNNNNGG 2 cut(s) 95, 1499
BseMII CTCAG 1 cut(s) 814
BseNI ACTGG 1 cut(s) 639
BseXI GCAGC 2 cut(s) 3, 1080
BsgI GTGCAG 1 cut(s) 119
Bsh1285I CGRYCG 1 cut(s) 436
BshNI GGYRCC 1 cut(s) 98
BsiEI CGRYCG 1 cut(s) 436
BsiHKCI CYCGRG 1 cut(s) 1330
BsiSI CCGG 1 cut(s) 150
BslFI GGGAC 1 cut(s) 621
BslI CCNNNNNNNGG 2 cut(s) 95, 1499
BsmAI GTCTC 3 cut(s) 1355, 1421, 1569
BsmFI GGGAC 1 cut(s) 621
BsmI GAATGC 1 cut(s) 464
Bso31I GGTCTC 2 cut(s) 1355, 1569
BsoBI CYCGRG 1 cut(s) 1330
Bsp119I TTCGAA 1 cut(s) 47
Bsp1286I GDGCHC 1 cut(s) 985
Bsp143I GATC 7 cut(s) 130, 490, 736, 874, 1135, 1294, 1372
BspACI CCGC 3 cut(s) 436, 1014, 1335
BspCNI CTCAG 1 cut(s) 813
BspHI TCATGA 4 cut(s) 25, 520, 784, 823
BspLI GGNNCC 1 cut(s) 100
BspPI GGATC 4 cut(s) 138, 731, 869, 1367
BspT104I TTCGAA 1 cut(s) 47
BspT107I GGYRCC 1 cut(s) 98
BspTI CTTAAG 1 cut(s) 1208
BspTNI GGTCTC 2 cut(s) 1355, 1569
BsrBI CCGCTC 1 cut(s) 1335
BsrFI RCCGGY 1 cut(s) 149
BsrI ACTGG 1 cut(s) 639
BssAI RCCGGY 1 cut(s) 149
BssECI CCNNGG 4 cut(s) 79, 202, 497, 1164
BssMI GATC 7 cut(s) 130, 490, 736, 874, 1135, 1294, 1372
BssT1I CCWWGG 3 cut(s) 202, 497, 1164
Bst2UI CCWGG 3 cut(s) 81, 96, 1476
Bst4CI ACNGT 2 cut(s) 219, 1182
Bst6I CTCTTC 1 cut(s) 383
BstAFI CTTAAG 1 cut(s) 1208
BstAPI GCANNNNNTGC 1 cut(s) 294
BstBI TTCGAA 1 cut(s) 47
BstC8I GCNNGC 2 cut(s) 67, 151
BstDEI CTNAG 1 cut(s) 800
BstF5I GGATG 8 cut(s) 31, 149, 694, 814, 926, 997, 1141, 1147
BstKTI GATC 7 cut(s) 133, 493, 739, 877, 1138, 1297, 1375
BstMAI GTCTC 3 cut(s) 1355, 1421, 1569
BstMBI GATC 7 cut(s) 130, 490, 736, 874, 1135, 1294, 1372
BstMCI CGRYCG 1 cut(s) 436
BstMWI GCNNNNNNNGC 7 cut(s) 75, 120, 294, 303, 367, 888, 1548
BstNI CCWGG 3 cut(s) 81, 96, 1476
BstNSI RCATGY 1 cut(s) 420
BstSCI CCNGG 3 cut(s) 79, 94, 1474
BstSFI CTRYAG 1 cut(s) 1072
BstV1I GCAGC 2 cut(s) 3, 1080
BstV2I GAAGAC 4 cut(s) 91, 397, 599, 923
BstX2I RGATCY 2 cut(s) 130, 736
BstXI CCANNNNNNTGG 1 cut(s) 1322
BstYI RGATCY 2 cut(s) 130, 736
BtgZI GCGATG 1 cut(s) 512
BtsCI GGATG 8 cut(s) 31, 149, 694, 814, 926, 997, 1141, 1147
BtsIMutI CAGTG 1 cut(s) 1187
Cac8I GCNNGC 2 cut(s) 67, 151
CciI TCATGA 4 cut(s) 25, 520, 784, 823
Cfr10I RCCGGY 1 cut(s) 149
Cfr13I GGNCC 1 cut(s) 1161
Csp6I GTAC 4 cut(s) 486, 1048, 1433, 1487
CviQI GTAC 4 cut(s) 486, 1048, 1433, 1487
DdeI CTNAG 1 cut(s) 800
DpnI GATC 7 cut(s) 132, 492, 738, 876, 1137, 1296, 1374
DpnII GATC 7 cut(s) 130, 490, 736, 874, 1135, 1294, 1372
Eam1104I CTCTTC 1 cut(s) 383
EarI CTCTTC 1 cut(s) 383
Eco130I CCWWGG 3 cut(s) 202, 497, 1164
Eco24I GRGCYC 1 cut(s) 985
Eco31I GGTCTC 2 cut(s) 1355, 1569
Eco32I GATATC 1 cut(s) 1096
Eco47I GGWCC 1 cut(s) 1161
Eco88I CYCGRG 1 cut(s) 1330
EcoRII CCWGG 3 cut(s) 79, 94, 1474
EcoRV GATATC 1 cut(s) 1096
EcoT14I CCWWGG 3 cut(s) 202, 497, 1164
EcoT22I ATGCAT 1 cut(s) 418
EcoT38I GRGCYC 1 cut(s) 985
ErhI CCWWGG 3 cut(s) 202, 497, 1164
FalI AAGNNNNNCTT 4 cut(s) 110, 142, 1535, 1567
FaqI GGGAC 1 cut(s) 621
FbaI TGATCA 1 cut(s) 1294
Fnu4HI GCNGC 2 cut(s) 17, 1069
FokI GGATG 8 cut(s) 18, 156, 701, 821, 933, 1004, 1128, 1134
FriOI GRGCYC 1 cut(s) 985
Fsp4HI GCNGC 2 cut(s) 17, 1069
FspBI CTAG 5 cut(s) 395, 927, 1436, 1571, 1614
GluI GCNGC 2 cut(s) 17, 1069
HapII CCGG 1 cut(s) 150
HincII GTYRAC 1 cut(s) 257
HindII GTYRAC 1 cut(s) 257
HinfI GANTC 1 cut(s) 1464
HpaII CCGG 1 cut(s) 150
HphI GGTGA 3 cut(s) 236, 1118, 1349
Hpy166II GTNNAC 3 cut(s) 257, 486, 1433
Hpy188I TCNGA 5 cut(s) 215, 468, 591, 803, 1117
Hpy188III TCNNGA 8 cut(s) 26, 193, 521, 660, 785, 824, 1058, 1481
Hpy8I GTNNAC 3 cut(s) 257, 486, 1433
Hpy99I CGWCG 1 cut(s) 314
HpyAV CCTTC 4 cut(s) 422, 557, 920, 1450
HpyCH4III ACNGT 2 cut(s) 219, 1182
HpyCH4IV ACGT 3 cut(s) 795, 996, 1603
HpyF10VI GCNNNNNNNGC 7 cut(s) 75, 120, 294, 303, 367, 888, 1548
HpyF3I CTNAG 1 cut(s) 800
HpySE526I ACGT 3 cut(s) 795, 996, 1603
KroI GCCGGC 1 cut(s) 149
KroNI GCCGGC 1 cut(s) 151
Ksp22I TGATCA 1 cut(s) 1294
Kzo9I GATC 7 cut(s) 130, 490, 736, 874, 1135, 1294, 1372
LmnI GCTCC 4 cut(s) 477, 614, 1016, 1112
Lsp1109I GCAGC 2 cut(s) 3, 1080
LweI GCATC 6 cut(s) 40, 315, 459, 535, 1150, 1309
MaeI CTAG 5 cut(s) 395, 927, 1436, 1571, 1614
MaeII ACGT 3 cut(s) 795, 996, 1603
MaeIII GTNAC 5 cut(s) 1055, 1305, 1337, 1385, 1586
MalI GATC 7 cut(s) 132, 492, 738, 876, 1137, 1296, 1374
MbiI CCGCTC 1 cut(s) 1335
MboI GATC 7 cut(s) 130, 490, 736, 874, 1135, 1294, 1372
MflI RGATCY 2 cut(s) 130, 736
MhlI GDGCHC 1 cut(s) 985
MluCI AATT 6 cut(s) 42, 155, 750, 814, 969, 1426
MlyI GAGTC 1 cut(s) 1458
MmeI TCCRAC 2 cut(s) 376, 569
MnlI CCTC 6 cut(s) 170, 386, 392, 842, 945, 1070
Mph1103I ATGCAT 1 cut(s) 418
MroNI GCCGGC 1 cut(s) 149
MroXI GAANNNNTTC 2 cut(s) 795, 1488
MseI TTAA 4 cut(s) 753, 1209, 1217, 1425
MslI CAYNNNNRTG 4 cut(s) 828, 990, 1131, 1287
MspA1I CMGCKG 2 cut(s) 1071, 1527
MspCI CTTAAG 1 cut(s) 1208
MspI CCGG 1 cut(s) 150
MspR9I CCNGG 3 cut(s) 81, 96, 1476
Mva1269I GAATGC 1 cut(s) 464
MvaI CCWGG 3 cut(s) 81, 96, 1476
MwoI GCNNNNNNNGC 7 cut(s) 75, 120, 294, 303, 367, 888, 1548
NaeI GCCGGC 1 cut(s) 151
NdeII GATC 7 cut(s) 130, 490, 736, 874, 1135, 1294, 1372
NgoMIV GCCGGC 1 cut(s) 149
NlaIV GGNNCC 1 cut(s) 100
NmuCI GTSAC 3 cut(s) 1055, 1305, 1337
NsiI ATGCAT 1 cut(s) 418
NspI RCATGY 1 cut(s) 420
NspV TTCGAA 1 cut(s) 47
PaeR7I CTCGAG 1 cut(s) 1330
PagI TCATGA 4 cut(s) 25, 520, 784, 823
PcsI WCGNNNNNNNCGW 1 cut(s) 1056
PctI GAATGC 1 cut(s) 464
PdiI GCCGGC 1 cut(s) 151
PdmI GAANNNNTTC 2 cut(s) 795, 1488
PkrI GCNGC 2 cut(s) 18, 1070
PleI GAGTC 1 cut(s) 1458
PpsI GAGTC 1 cut(s) 1458
PshBI ATTAAT 2 cut(s) 753, 1425
Psp6I CCWGG 3 cut(s) 79, 94, 1474
PspGI CCWGG 3 cut(s) 79, 94, 1474
PspN4I GGNNCC 1 cut(s) 100
PspPI GGNCC 1 cut(s) 1161
PspXI VCTCGAGB 1 cut(s) 1330
PsuI RGATCY 2 cut(s) 130, 736
PvuII CAGCTG 2 cut(s) 1071, 1527
RsaI GTAC 4 cut(s) 487, 1049, 1434, 1488
RsaNI GTAC 4 cut(s) 486, 1048, 1433, 1487
RseI CAYNNNNRTG 4 cut(s) 828, 990, 1131, 1287
SaqAI TTAA 4 cut(s) 753, 1209, 1217, 1425
SatI GCNGC 2 cut(s) 17, 1069
Sau3AI GATC 7 cut(s) 130, 490, 736, 874, 1135, 1294, 1372
Sau96I GGNCC 1 cut(s) 1161
ScaI AGTACT 1 cut(s) 1488
SchI GAGTC 1 cut(s) 1458
ScrFI CCNGG 3 cut(s) 81, 96, 1476
SduI GDGCHC 1 cut(s) 985
SfaNI GCATC 6 cut(s) 40, 315, 459, 535, 1150, 1309
SfcI CTRYAG 1 cut(s) 1072
Sfr274I CTCGAG 1 cut(s) 1330
SfuI TTCGAA 1 cut(s) 47
SinI GGWCC 1 cut(s) 1161
SlaI CTCGAG 1 cut(s) 1330
SmiMI CAYNNNNRTG 4 cut(s) 828, 990, 1131, 1287
SmlI CTYRAG 3 cut(s) 191, 1208, 1330
SmoI CTYRAG 3 cut(s) 191, 1208, 1330
SpeI ACTAGT 1 cut(s) 394
Sse9I AATT 6 cut(s) 42, 155, 750, 814, 969, 1426
SsiI CCGC 3 cut(s) 436, 1014, 1335
SspMI CTAG 5 cut(s) 395, 927, 1436, 1571, 1614
StyD4I CCNGG 3 cut(s) 79, 94, 1474
StyI CCWWGG 3 cut(s) 202, 497, 1164
TaaI ACNGT 2 cut(s) 219, 1182
TaiI ACGT 3 cut(s) 798, 999, 1606
TaqI TCGA 7 cut(s) 47, 309, 702, 732, 937, 1331, 1510
TaqII GACCGA 2 cut(s) 103, 1385
TasI AATT 6 cut(s) 42, 155, 750, 814, 969, 1426
TatI WGTACW 3 cut(s) 485, 1432, 1486
Tru1I TTAA 4 cut(s) 753, 1209, 1217, 1425
Tru9I TTAA 4 cut(s) 753, 1209, 1217, 1425
TscAI CASTG 1 cut(s) 1187
TseFI GTSAC 3 cut(s) 1055, 1305, 1337
TseI GCWGC 2 cut(s) 16, 1068
Tsp45I GTSAC 3 cut(s) 1055, 1305, 1337
TspGWI ACGGA 1 cut(s) 1088
TspRI CASTG 1 cut(s) 1187
Vha464I CTTAAG 1 cut(s) 1208
VpaK11BI GGWCC 1 cut(s) 1161
VspI ATTAAT 2 cut(s) 753, 1425
XapI RAATTY 1 cut(s) 155
XceI RCATGY 1 cut(s) 420
XhoI CTCGAG 1 cut(s) 1330
XmnI GAANNNNTTC 2 cut(s) 795, 1488
XspI CTAG 5 cut(s) 395, 927, 1436, 1571, 1614
ZrmI AGTACT 1 cut(s) 1488
Zsp2I ATGCAT 1 cut(s) 418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.