Rh4BG170600

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0000226
Physical Location & Seq
Forward (+)
30551176 .. 30564775
13600 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG170600.1

Sequence Viewer

Length: 3684 bp
ATGCACAGTAATCATCCACTTCTTCTTATCACAAGCAAATCGAGAAGCTACCGTCGATATGCCTGTGATGTTTGTCGCAAACTCTTCGAGGGCTTCTCTTACACATGTTCTGAATGTCGCTTCGACATTGACATCAAATGTGCCTCAAATTTCAAAAACATAGGGTGTATACTACATTTCAGTCACAAGCATATATTGACCTTGAGTGATAATCCATCTGGAGGTGGTCCACCAGTATATTGTATTGGATGCCTAGAGCAAGTGCTTGGTCCTAGCTACATTTGCAAAAGGAATTCGTTGAGGGAGAAAAGTTGCTCCATTGTTCTACATAAGTCTTGCGCAGAGCTACCTCTTGAAATCCAGCACCCAATGCATCGCCAACACCTGCTTATGCTTAATCTAAGTGGAGCACGAGAATGCCACTGTGATGCTTGTGACCAAGATTGCAGCAGCAGATTTACTTACAATTGTTTCCAATGTGACTTCAACCTTCACCTTAAATGTGCTTCTGATTGGAAAGACTTTCAACATTTCAGCCATGAGCATCCATTATTGTTTAACAAACGAGAAGCGTCAGGTCAGCCAGCTTTATGCTCTGCATGTGAGGATCTAGTACTTGGTCCTAACTATAGTTGCAACCGATGCTCTAATTTCATTCTCCATAAGTCATGTGCAAAGCTACCTAGAGAGATCCTCCAACACCCGATGCACAGTAAACACCCACTTCTTCTTCTCACAGGCAAATCAAGAAGGTACAGTCAGTATGCATGTGATGTTTGCCGCAAAAGCTTCAAGAGCTTCTCTTACACATGTCCTGAATGTAGCTTTGATATTGACCTAAAATGTTCTTCCAATTTCAAAAGCATGGGTTGTCTATTACACTTCAGTCACAAGCACATATTGACCTTGAGTGATAATCCATCTGGAGGTGGTCCACCATTATATTGTATTGGGTGCCTAGAGCAAGTGCTTGGTCCTAGCTACATTTGCAAAAGGAATTCGTTGAGGGAGAAAAGTTGCTCCATTGTTCTACATAAGTCTTGCGCAGAGCTACCTCTTGAAATCCAGCACCCAATGCATCACCAACACTCGCTTGTGCTTAATCTAAGTGGAGCACGAGAATGCCACTGTGATGCTTGTGACCAAGATTGCAGCAGCAGATTTACTTACAATTGTTTCCAATGTGACTTCAACCTTCACCTTAAATGTGCTTCTGATTGGAAAGACTTTCAACATTTCAGCCACGAGCATCCATTATTGTTTAACAAACGTGAAGCGTCAGGTCAGCCAGCTTTATGCTCTGCATGTGAGGATCTAGTACTTGGTCCTAACTATAGTTGCAACCGATGCTCTAATTTCATTCTCCATAAGTCATGTGCAAAGCTACCTAGAGAGATCCTCCAGCACCCGATGCACAGTAAACACCCACTTCTTCTTATCACAGGCAAATCAAGAAGGTACAGTCAGTATGTATGTGATGTTTGCCGCAAAAGCTTTAAGAGCTTTTCTTACACATGTTCTGAATGTTGCTTTGATATTGACCTAAAATGTGCTTCCAATTTCAAAAGCATCGACTGTATAGTACACTTCAGTCACAAACATATATTGAGCTTAAGTGATAGTCCATCTGGAGGTAGTCCACCAGTCTCTTGTACTGGGTGCCTGGAGCCCGTGCTTGGTCCTAGCTACATTTGTAAAAGGAATTTAAGGGACAAAAGCTGCTCCATTCATCTGCATAAATCGTGTGCAGAGCTACCTCTTGAAATCCAACACCCAATGCACCGCCAACACTCACTTATTCTCAACCTAAATGGAGCACGAGAATGCCATTGTGATGCCTGTGACCAAGATTGCAGCCGCAGATTCACTTATAGCTGTTTCCAATGTGACTTCAACATCGACCTAAAATGTGCTTCTGAGAAAGGCTTCAAACATTTTAGTCACGAACATCCATTAATGTTCAAGAGGGGCAATAAAGCAAAGGAATATACTGGTCTACTAGTAATTTGCGATGGGTGCCAAGATCCAATACTTGGACCTAGTTACACATGCATCAATACATACCGACGTCGCAAATGTTGCTTCAATCTCCACAAATCATGTGCGGAGTTACCTAGTGAGATCCAGCACCCAGTGCACCGTCAACACCCACTTTTTCTCCTCAATTCAATTCAGAATGTTAAAGTCCGTTGCTTGTGTAATGCTTGCAACCAGCCTTGCTTATACCGCTACAATTGTTCCATATGTGATTTCAACCTTCACCTTAAATGTGCCTCCAATTGGGAAAACATTATTGGAAATGCCTCTCACGAGCATCAGTTCATTGTGCTACCCATGGAATTGGCTGACCTCCATATCAATTGTCACATTTGTGATGACTACTGGAATGGCAGCGCCTACTATATCTGTAGCATTTGCCAACTCTTGGTCCATCAGGAATGTGCTTCATTACCACGTGACATTAAAATGTCTGGGCACCAACATCGCCTCAACCTAACCTGGTTTCTTGAAGACATTTACCCCAAGGACCAGCTTTGTGTAGTCTGTCGTACAAGTGTTGAAAAATCTCGCGCTGTTTATTATTGTCACGAATGTAGTGGCTATGTTTCCCACACTACGTGCATGATACTTGAGTATTTTCGAGAAGAAGAAAACCCAAACAGAATCTCTGCTGATGATGATGATGAGTTCGATGATGATGGGCAATTAGAGCACTTCAGTCATCAGCATTTGTTACTCGTTAATGATCATCGTGAGCTGGTTCAAGATGAGAGGACAATTACTTGTGAAGGTTGCATTCGACCCATCAATACCATCACTGAAACCTTTTACAGCTGTACGAACCAAGAACAGTCGTGCCATTTCTTTCTCCACGATATCTGTGCTCGATTACCAGCAAAGATGTTTATCCCACTCCTTCACTCACATGTGTTCACACTGCTTTCTCGTGCTCCTTCTTTTGACGGCATGTTTCAGTGTTATATGTGTGGTAGCTTTAATCAAGGCTTTGTATACAGTTGTCAGGAATGTGCTTCTCCAGCAGGCGACAATCTTTTCTACCTTGACGTTGAGTGCAGTATGTATTGGAGGGACAAGACTCTTAAACATGAGTCTCATGCTCACCAGCTCCTTCTTTGTACAGAATGGGAGGACGTCTATTGCAGGGGTTGTGGTTCCGATATATTTTTCTGCTTTAGTTGTAAGAAATGCAACTACTATCTTTGTATTTCGTGTGTCAAATTACCTCTTACTGGTAGGCACCGATACGACGAGCATCCTCTCAAGCTCACCTATGCTAGTGCTGAAGACGAGCTAGGTGAATATTACTGTGAAGTATGTGAAGGGACAAGAAATCCAGCACATTGGTTCTACGAGTGCAAAGACTGTGAGTTTGATTGTCATCCTCATTGCATTCTGGGGAGGTATCCGTATGTTAAGCTAGGGAGCACTTACAAGCATGATGCTCATGCAGCACACCACGTCACTCTTGTTAGTAAGTGGAAGAGCCCCATTCGGCTGGATAAGAGAGACAACATTCTTCCTTGTGAGAAGTGTGGTATACTTTGCAAGGGATTGGTCTTTGAATGCAAAGAGTGCAATATAAATTTTCACCGAGATGGATGTTGCGGGACTATAGATTTGGAAAGTTCTCGAACGTCTTCTCAGATCCAAGAGCTAAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

1227

Amino Acids

140.72

Weight (kDa)

6.93

Isoelectric Point (pI)

56.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 2 - 48 4.7e-09 C1 domain
C1_2 PF03107 124 - 169 6.6e-06 C1 domain
C1_2 PF03107 178 - 225 8e-09 C1 domain
C1_2 PF03107 236 - 282 4.7e-09 C1 domain
C1_2 PF03107 360 - 404 8.7e-07 C1 domain
C1_2 PF03107 413 - 460 8e-09 C1 domain
C1_2 PF03107 471 - 518 3.9e-09 C1 domain
C1_2 PF03107 593 - 638 2.1e-06 C1 domain
C1_2 PF03107 712 - 758 4.8e-07 C1 domain
C1_2 PF03107 825 - 875 1.1e-06 C1 domain
C1_2 PF03107 1088 - 1138 1.5e-07 C1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 393
AatII GACGTC 2 cut(s) 2071, 3156
Acc16I TGCGCA 2 cut(s) 340, 1045
Acc36I ACCTGC 1 cut(s) 393
AccB1I GGYRCC 5 cut(s) 954, 1659, 2016, 2475, 3258
AccB7I CCANNNNNTGG 2 cut(s) 2033, 2425
AccI GTMKAC 4 cut(s) 169, 1996, 3012, 3559
AccII CGCG 1 cut(s) 2571
AciI CCGC 7 cut(s) 781, 1486, 1783, 1858, 2105, 2227, 3627
AclWI GGATC 7 cut(s) 615, 685, 1320, 1390, 2018, 2116, 3661
AcsI RAATTY 5 cut(s) 148, 292, 997, 1702, 3604
AcuI CTGAAG 4 cut(s) 868, 1573, 2701, 3324
AcvI CACGTG 1 cut(s) 2456
AcyI GRCGYC 2 cut(s) 2068, 3153
AdeI CACNNNGTG 2 cut(s) 2134, 2619
AfaI GTAC 9 cut(s) 615, 755, 1320, 1460, 1584, 1654, 2551, 2839, 3139
AfiI CCNNNNNNNGG 8 cut(s) 221, 926, 1631, 1676, 2033, 2280, 2425, 3251
AflII CTTAAG 1 cut(s) 1612
AflIII ACRYGT 4 cut(s) 104, 809, 1514, 2926
AhlI ACTAGT 1 cut(s) 1999
AjiI CACGTC 1 cut(s) 3481
AjnI CCWGG 2 cut(s) 1662, 2498
AjuI GAANNNNNNNTTGG 2 cut(s) 2277, 2309
AleI CACNNNNGTG 1 cut(s) 2370
Alw21I GWGCWC 8 cut(s) 412, 1117, 1819, 2139, 2715, 2887, 2953, 3449
Alw26I GTCTC 3 cut(s) 1651, 3117, 3522
Alw44I GTGCAC 1 cut(s) 2135
AlwI GGATC 7 cut(s) 615, 685, 1320, 1390, 2018, 2116, 3661
ApaLI GTGCAC 1 cut(s) 2135
ApeKI GCWGC 8 cut(s) 447, 450, 1152, 1155, 1719, 1854, 2391, 3470
ApoI RAATTY 5 cut(s) 148, 292, 997, 1702, 3604
ArsI GACNNNNNNTTYG 4 cut(s) 3374, 3406, 3622, 3654
AseI ATTAAT 1 cut(s) 1955
Asp700I GAANNNNTTC 2 cut(s) 1925, 3658
AspLEI GCGC 4 cut(s) 341, 1046, 2396, 2573
AsuHPI GGTGA 8 cut(s) 485, 1073, 1190, 2252, 3113, 3280, 3329, 3602
BaeGI GKGCMC 2 cut(s) 2139, 2478
BaeI ACNNNNGTAYC 2 cut(s) 2618, 2651
BanI GGYRCC 5 cut(s) 954, 1659, 2016, 2475, 3258
BanII GRGCYC 2 cut(s) 1671, 3509
BauI CACGAG 6 cut(s) 411, 1116, 1244, 1818, 2309, 2946
BbrPI CACGTG 1 cut(s) 2456
BbsI GAAGAC 3 cut(s) 2517, 3312, 3651
Bbv12I GWGCWC 8 cut(s) 412, 1117, 1819, 2139, 2715, 2887, 2953, 3449
BbvI GCAGC 8 cut(s) 459, 462, 1164, 1167, 1706, 1866, 2403, 3482
BccI CCATC 9 cut(s) 223, 928, 1633, 2006, 2439, 2693, 2813, 2822, 3611
BceAI ACGGC 1 cut(s) 2980
BcgI CGANNNNNNTGC 6 cut(s) 67, 101, 2465, 2499, 2864, 2898
BciT130I CCWGG 2 cut(s) 1664, 2500
BciVI GTATCC 1 cut(s) 3435
BclI TGATCA 1 cut(s) 2746
BcoDI GTCTC 3 cut(s) 1651, 3117, 3522
BcuI ACTAGT 1 cut(s) 1999
BfmI CTRYAG 4 cut(s) 628, 1333, 2407, 3633
BfoI RGCGCY 1 cut(s) 2397
BfrI CTTAAG 1 cut(s) 1612
BfuAI ACCTGC 1 cut(s) 393
BfuI GTATCC 1 cut(s) 3435
BmcAI AGTACT 2 cut(s) 615, 1320
Bme1390I CCNGG 2 cut(s) 1664, 2500
BmgBI CACGTC 1 cut(s) 3481
BmiI GGNNCC 7 cut(s) 956, 1661, 1668, 2018, 2477, 3175, 3260
BmrFI CCNGG 2 cut(s) 1664, 2500
BmrI ACTGGG 2 cut(s) 1665, 2126
BmuI ACTGGG 2 cut(s) 1665, 2126
BpiI GAAGAC 3 cut(s) 2517, 3312, 3651
BplI GAGNNNNNCTC 6 cut(s) 80, 112, 678, 710, 1383, 1415
BpmI CTGGAG 6 cut(s) 240, 945, 1385, 1650, 1685, 3021
BpuEI CTTGAG 4 cut(s) 223, 928, 2651, 3266
BsaAI YACGTR 2 cut(s) 2456, 2619
BsaBI GATNNNNATC 2 cut(s) 2906, 3399
BsaHI GRCGYC 2 cut(s) 2068, 3153
BsaJI CCNNGG 2 cut(s) 2334, 2523
BsaXI ACNNNNNCTCC 2 cut(s) 2142, 2172
Bsc4I CCNNNNNNNGG 8 cut(s) 221, 926, 1631, 1676, 2033, 2280, 2425, 3251
Bse1I ACTGG 7 cut(s) 233, 1643, 1660, 1996, 2132, 2387, 3256
Bse3DI GCAATG 1 cut(s) 3406
Bse8I GATNNNNATC 2 cut(s) 2906, 3399
BseBI CCWGG 2 cut(s) 1664, 2500
BseDI CCNNGG 2 cut(s) 2334, 2523
BseGI GGATG 8 cut(s) 13, 254, 544, 1249, 1948, 3274, 3400, 3626
BseJI GATNNNNATC 2 cut(s) 2906, 3399
BseLI CCNNNNNNNGG 8 cut(s) 221, 926, 1631, 1676, 2033, 2280, 2425, 3251
BseMI GCAATG 1 cut(s) 3406
BseMII CTCAG 2 cut(s) 1908, 3677
BseNI ACTGG 7 cut(s) 233, 1643, 1660, 1996, 2132, 2387, 3256
BseRI GAGGAG 1 cut(s) 2150
BseSI GKGCMC 2 cut(s) 2139, 2478
BseXI GCAGC 8 cut(s) 459, 462, 1164, 1167, 1706, 1866, 2403, 3482
BsgI GTGCAG 2 cut(s) 1767, 3094
Bsh1236I CGCG 1 cut(s) 2571
BshNI GGYRCC 5 cut(s) 954, 1659, 2016, 2475, 3258
BsiHKAI GWGCWC 8 cut(s) 412, 1117, 1819, 2139, 2715, 2887, 2953, 3449
BslFI GGGAC 4 cut(s) 1724, 3104, 3358, 3643
BslI CCNNNNNNNGG 8 cut(s) 221, 926, 1631, 1676, 2033, 2280, 2425, 3251
BsmAI GTCTC 3 cut(s) 1651, 3117, 3522
BsmFI GGGAC 4 cut(s) 1724, 3104, 3358, 3643
BsmI GAATGC 6 cut(s) 422, 1127, 1829, 2796, 3411, 3590
Bsp1407I TGTACA 1 cut(s) 3137
Bsp143I GATC 8 cut(s) 607, 690, 1312, 1395, 2023, 2121, 2746, 3666
Bsp19I CCATGG 1 cut(s) 2334
BspACI CCGC 7 cut(s) 781, 1486, 1783, 1858, 2105, 2227, 3627
BspCNI CTCAG 2 cut(s) 1909, 3676
BspFNI CGCG 1 cut(s) 2571
BspLI GGNNCC 7 cut(s) 956, 1661, 1668, 2018, 2477, 3175, 3260
BspMI ACCTGC 1 cut(s) 393
BspPI GGATC 7 cut(s) 615, 685, 1320, 1390, 2018, 2116, 3661
BspQI GCTCTTC 1 cut(s) 3497
BspT107I GGYRCC 5 cut(s) 954, 1659, 2016, 2475, 3258
BspTI CTTAAG 1 cut(s) 1612
BsrDI GCAATG 1 cut(s) 3406
BsrGI TGTACA 1 cut(s) 3137
BsrI ACTGG 7 cut(s) 233, 1643, 1660, 1996, 2132, 2387, 3256
BssECI CCNNGG 2 cut(s) 2334, 2523
BssMI GATC 8 cut(s) 607, 690, 1312, 1395, 2023, 2121, 2746, 3666
BssNAI GTATAC 3 cut(s) 170, 3013, 3560
BssNI GRCGYC 2 cut(s) 2068, 3153
BssSI CACGAG 6 cut(s) 411, 1116, 1244, 1818, 2309, 2946
BssT1I CCWWGG 2 cut(s) 2334, 2523
Bst1107I GTATAC 3 cut(s) 170, 3013, 3560
Bst2BI CACGAG 6 cut(s) 411, 1116, 1244, 1818, 2309, 2946
Bst2UI CCWGG 2 cut(s) 1664, 2500
Bst6I CTCTTC 2 cut(s) 89, 3497
BstACI GRCGYC 2 cut(s) 2068, 3153
BstAFI CTTAAG 1 cut(s) 1612
BstAPI GCANNNNNTGC 8 cut(s) 370, 642, 1075, 1347, 1411, 2079, 2134, 3594
BstAUI TGTACA 1 cut(s) 3137
BstBAI YACGTR 2 cut(s) 2456, 2619
BstC8I GCNNGC 4 cut(s) 585, 1290, 2206, 3043
BstDEI CTNAG 5 cut(s) 401, 1106, 1917, 3663, 3677
BstDSI CCRYGG 1 cut(s) 2334
BstF5I GGATG 8 cut(s) 13, 254, 544, 1249, 1948, 3274, 3400, 3626
BstFNI CGCG 1 cut(s) 2571
BstH2I RGCGCY 1 cut(s) 2397
BstHHI GCGC 4 cut(s) 341, 1046, 2396, 2573
BstKTI GATC 8 cut(s) 610, 693, 1315, 1398, 2026, 2124, 2749, 3669
BstMAI GTCTC 3 cut(s) 1651, 3117, 3522
BstMBI GATC 8 cut(s) 607, 690, 1312, 1395, 2023, 2121, 2746, 3666
BstNI CCWGG 2 cut(s) 1664, 2500
BstNSI RCATGY 9 cut(s) 108, 603, 771, 813, 1308, 1518, 2052, 2930, 2971
BstSCI CCNGG 2 cut(s) 1662, 2498
BstSFI CTRYAG 4 cut(s) 628, 1333, 2407, 3633
BstSLI GKGCMC 2 cut(s) 2139, 2478
BstUI CGCG 1 cut(s) 2571
BstV1I GCAGC 8 cut(s) 459, 462, 1164, 1167, 1706, 1866, 2403, 3482
BstV2I GAAGAC 3 cut(s) 2517, 3312, 3651
BstX2I RGATCY 7 cut(s) 607, 690, 1312, 1395, 2023, 2121, 3666
BstXI CCANNNNNNTGG 3 cut(s) 2341, 3363, 3517
BstYI RGATCY 7 cut(s) 607, 690, 1312, 1395, 2023, 2121, 3666
BstZ17I GTATAC 3 cut(s) 170, 3013, 3560
BsuI GTATCC 1 cut(s) 3435
BtgI CCRYGG 1 cut(s) 2334
BtgZI GCGATG 3 cut(s) 359, 2025, 2468
BtrI CACGTC 1 cut(s) 3481
BtsCI GGATG 8 cut(s) 13, 254, 544, 1249, 1948, 3274, 3400, 3626
BtsI GCAGTG 1 cut(s) 2936
BtsIMutI CAGTG 6 cut(s) 421, 1126, 2139, 2817, 2936, 2981
BveI ACCTGC 1 cut(s) 393
Cac8I GCNNGC 4 cut(s) 585, 1290, 2206, 3043
CfoI GCGC 4 cut(s) 341, 1046, 2396, 2573
CseI GACGC 2 cut(s) 561, 1266
CsiI ACCWGGT 1 cut(s) 2498
Csp6I GTAC 9 cut(s) 614, 754, 1319, 1459, 1583, 1653, 2550, 2838, 3138
CviQI GTAC 9 cut(s) 614, 754, 1319, 1459, 1583, 1653, 2550, 2838, 3138
DdeI CTNAG 5 cut(s) 401, 1106, 1917, 3663, 3677
DpnI GATC 8 cut(s) 609, 692, 1314, 1397, 2025, 2123, 2748, 3668
DpnII GATC 8 cut(s) 607, 690, 1312, 1395, 2023, 2121, 2746, 3666
DraIII CACNNNGTG 2 cut(s) 2134, 2619
Eam1104I CTCTTC 2 cut(s) 89, 3497
EarI CTCTTC 2 cut(s) 89, 3497
Eco130I CCWWGG 2 cut(s) 2334, 2523
Eco24I GRGCYC 2 cut(s) 1671, 3509
Eco32I GATATC 1 cut(s) 2878
Eco57I CTGAAG 4 cut(s) 868, 1573, 2701, 3324
Eco72I CACGTG 1 cut(s) 2456
EcoRI GAATTC 2 cut(s) 292, 997
EcoRII CCWGG 2 cut(s) 1662, 2498
EcoRV GATATC 1 cut(s) 2878
EcoT14I CCWWGG 2 cut(s) 2334, 2523
EcoT22I ATGCAT 4 cut(s) 375, 769, 1080, 2054
EcoT38I GRGCYC 2 cut(s) 1671, 3509
ErhI CCWWGG 2 cut(s) 2334, 2523
FaqI GGGAC 4 cut(s) 1724, 3104, 3358, 3643
FauI CCCGC 1 cut(s) 3620
FauNDI CATATG 1 cut(s) 2243
FbaI TGATCA 1 cut(s) 2746
FblI GTMKAC 4 cut(s) 169, 1996, 3012, 3559
FokI GGATG 7 cut(s) 261, 531, 1236, 1935, 3261, 3387, 3633
FriOI GRGCYC 2 cut(s) 1671, 3509
FspI TGCGCA 2 cut(s) 340, 1045
GlaI GCGC 4 cut(s) 340, 1045, 2395, 2572
GsuI CTGGAG 6 cut(s) 240, 945, 1385, 1650, 1685, 3021
HaeII RGCGCY 1 cut(s) 2397
HgaI GACGC 2 cut(s) 561, 1266
HhaI GCGC 4 cut(s) 341, 1046, 2396, 2573
Hin1I GRCGYC 2 cut(s) 2068, 3153
Hin6I GCGC 4 cut(s) 339, 1044, 2394, 2571
HinP1I GCGC 4 cut(s) 339, 1044, 2394, 2571
HincII GTYRAC 1 cut(s) 2144
HindII GTYRAC 1 cut(s) 2144
HindIII AAGCTT 2 cut(s) 787, 1492
HinfI GANTC 4 cut(s) 1863, 2664, 3097, 3110
HphI GGTGA 8 cut(s) 485, 1073, 1190, 2252, 3113, 3280, 3329, 3602
Hpy188I TCNGA 8 cut(s) 112, 511, 1216, 1522, 1918, 2175, 3178, 3666
Hpy99I CGWCG 4 cut(s) 57, 2070, 2073, 3272
HpyCH4IV ACGT 8 cut(s) 1270, 2068, 2455, 2618, 3066, 3153, 3480, 3656
HpyF3I CTNAG 5 cut(s) 401, 1106, 1917, 3663, 3677
HpySE526I ACGT 8 cut(s) 1270, 2068, 2455, 2618, 3066, 3153, 3480, 3656
Hsp92I GRCGYC 2 cut(s) 2068, 3153
HspAI GCGC 4 cut(s) 339, 1044, 2394, 2571
Ksp22I TGATCA 1 cut(s) 2746
Kzo9I GATC 8 cut(s) 607, 690, 1312, 1395, 2023, 2121, 2746, 3666
LguI GCTCTTC 1 cut(s) 3497
Lsp1109I GCAGC 8 cut(s) 459, 462, 1164, 1167, 1706, 1866, 2403, 3482
MabI ACCWGGT 1 cut(s) 2498
MaeII ACGT 8 cut(s) 1270, 2068, 2455, 2618, 3066, 3153, 3480, 3656
MalI GATC 8 cut(s) 609, 692, 1314, 1397, 2025, 2123, 2748, 3668
MboI GATC 8 cut(s) 607, 690, 1312, 1395, 2023, 2121, 2746, 3666
MfeI CAATTG 5 cut(s) 466, 1171, 2233, 2278, 2359
MflI RGATCY 7 cut(s) 607, 690, 1312, 1395, 2023, 2121, 3666
MlyI GAGTC 2 cut(s) 3091, 3119
MmeI TCCRAC 2 cut(s) 721, 1792
Mph1103I ATGCAT 4 cut(s) 375, 769, 1080, 2054
MroXI GAANNNNTTC 2 cut(s) 1925, 3658
MspA1I CMGCKG 1 cut(s) 2835
MspCI CTTAAG 1 cut(s) 1612
MspR9I CCNGG 2 cut(s) 1664, 2500
MunI CAATTG 5 cut(s) 466, 1171, 2233, 2278, 2359
Mva1269I GAATGC 6 cut(s) 422, 1127, 1829, 2796, 3411, 3590
MvaI CCWGG 2 cut(s) 1664, 2500
MvnI CGCG 1 cut(s) 2571
NcoI CCATGG 1 cut(s) 2334
NdeI CATATG 1 cut(s) 2243
NdeII GATC 8 cut(s) 607, 690, 1312, 1395, 2023, 2121, 2746, 3666
NlaIV GGNNCC 7 cut(s) 956, 1661, 1668, 2018, 2477, 3175, 3260
NsbI TGCGCA 2 cut(s) 340, 1045
NsiI ATGCAT 4 cut(s) 375, 769, 1080, 2054
NspI RCATGY 9 cut(s) 108, 603, 771, 813, 1308, 1518, 2052, 2930, 2971
OliI CACNNNNGTG 1 cut(s) 2370
PaqCI CACCTGC 1 cut(s) 393
PciI ACATGT 4 cut(s) 104, 809, 1514, 2926
PciSI GCTCTTC 1 cut(s) 3497
PctI GAATGC 6 cut(s) 422, 1127, 1829, 2796, 3411, 3590
PdmI GAANNNNTTC 2 cut(s) 1925, 3658
PfeI GAWTC 2 cut(s) 1863, 2664
PflMI CCANNNNNTGG 2 cut(s) 2033, 2425
PleI GAGTC 2 cut(s) 3091, 3118
PmaCI CACGTG 1 cut(s) 2456
PmlI CACGTG 1 cut(s) 2456
PpsI GAGTC 2 cut(s) 3091, 3118
Ppu21I YACGTR 2 cut(s) 2456, 2619
PscI ACATGT 4 cut(s) 104, 809, 1514, 2926
PshBI ATTAAT 1 cut(s) 1955
Psp6I CCWGG 2 cut(s) 1662, 2498
PspCI CACGTG 1 cut(s) 2456
PspGI CCWGG 2 cut(s) 1662, 2498
PspN4I GGNNCC 7 cut(s) 956, 1661, 1668, 2018, 2477, 3175, 3260
PsuI RGATCY 7 cut(s) 607, 690, 1312, 1395, 2023, 2121, 3666
PvuII CAGCTG 1 cut(s) 2835
RsaI GTAC 9 cut(s) 615, 755, 1320, 1460, 1584, 1654, 2551, 2839, 3139
RsaNI GTAC 9 cut(s) 614, 754, 1319, 1459, 1583, 1653, 2550, 2838, 3138
SapI GCTCTTC 1 cut(s) 3497
Sau3AI GATC 8 cut(s) 607, 690, 1312, 1395, 2023, 2121, 2746, 3666
ScaI AGTACT 2 cut(s) 615, 1320
SchI GAGTC 2 cut(s) 3091, 3119
ScrFI CCNGG 2 cut(s) 1664, 2500
SexAI ACCWGGT 1 cut(s) 2498
SfcI CTRYAG 4 cut(s) 628, 1333, 2407, 3633
SmlI CTYRAG 5 cut(s) 202, 907, 1612, 2630, 3281
SmoI CTYRAG 5 cut(s) 202, 907, 1612, 2630, 3281
SpeI ACTAGT 1 cut(s) 1999
SsiI CCGC 7 cut(s) 781, 1486, 1783, 1858, 2105, 2227, 3627
SspI AATATT 1 cut(s) 3323
StyD4I CCNGG 2 cut(s) 1662, 2498
StyI CCWWGG 2 cut(s) 2334, 2523
TaiI ACGT 8 cut(s) 1273, 2071, 2458, 2621, 3069, 3156, 3483, 3659
TatI WGTACW 5 cut(s) 613, 1318, 1582, 1652, 3137
TauI GCSGC 3 cut(s) 783, 1488, 1860
TfiI GAWTC 2 cut(s) 1863, 2664
TscAI CASTG 6 cut(s) 428, 1133, 2139, 2824, 2943, 2981
TseI GCWGC 8 cut(s) 447, 450, 1152, 1155, 1719, 1854, 2391, 3470
TspDTI ATGAA 5 cut(s) 643, 1348, 1718, 2311, 2436
TspGWI ACGGA 2 cut(s) 2177, 3417
TspRI CASTG 6 cut(s) 428, 1133, 2139, 2824, 2943, 2981
Van91I CCANNNNNTGG 2 cut(s) 2033, 2425
Vha464I CTTAAG 1 cut(s) 1612
VneI GTGCAC 1 cut(s) 2135
VspI ATTAAT 1 cut(s) 1955
XapI RAATTY 5 cut(s) 148, 292, 997, 1702, 3604
XceI RCATGY 9 cut(s) 108, 603, 771, 813, 1308, 1518, 2052, 2930, 2971
XmiI GTMKAC 4 cut(s) 169, 1996, 3012, 3559
XmnI GAANNNNTTC 2 cut(s) 1925, 3658
ZraI GACGTC 2 cut(s) 2069, 3154
ZrmI AGTACT 2 cut(s) 615, 1320
Zsp2I ATGCAT 4 cut(s) 375, 769, 1080, 2054
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.