AT5G59930

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
OG0000226
Physical Location & Seq
Forward (+)
24134225 .. 24136665
2441 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G59930.1

Sequence Viewer

Length: 1971 bp
ATGGATACATCAGCAGTACAACTACCCTTTCGCGATTATTCTCTTCAACCTGCTCCTCGGTACATCAACGCTAGATGTCATATCTGCTCTGTAACAGGTGCCATCTACAACGGCTACTTTTGCAATGATCCTATTGTTTGGATGCATAAGGAGTGCGTTGAGCTCCCATCTGAGATCAACCATCTTTTCCACCCCCAACATCCTCTCTTGCTCACATATGAAGAGGGATGGTGGAGTTGTTTCTGTGCTTTGTGTGGAGAAACAAAGCCAGCGAAGTACTTTTATAGTTGTTCCACATGTAAAATCAAGGTGGATTTGACTTGTGGGATGAACCCACCACCGCCAGCTATTGAACATCCCATCTGCCATGACCATCCACTTGTCTTCCTGAAGAAAAGACAGGAGAAAACCCCTTGTGAAGTTTGCAAGAATAGAATTCTTGGATCATCCTATTCATGTCTTGGATGCGAGTTGTACTTCCACGTGGGCTGCATCCATCTCTCGAAAGAGGTAAATCATCCTTGTCACTCTGATCATCCTCTCATGCTCGTCGAATCTGAATCACTTACAGATAATGATAAGAAGACTTGTTTTCTATGTGGGCAACAACCGCATGGTATTCTTTATCATTGTTCTATCTGCAACTTCACACTGTGCATTGGTTGTATCAAATCACCACCACCTCTTGTTGTCGAGAATGTGAAGACGCACAAGCATCCTCTTACTTTCTTTCCAAGAGGAGTCTACTGCACTTGTAACGTTTGTGGGGTAAAAGGACTTATACTCTCTTATATGTGTCTTCAGTGTGGTTTTGCGGTCCATTGTAGTTGTGTAGACTTACCTCAAGTCATAAACATAAATCGTCATGATCATCGCATTTCTTTCACACAGCATCTTGGTCCTGGGTATTTGAACTGTGGAGTTTGCCGAAGAAGTGTATGCCAATTCAATGGAGCTTATTCTTGCTTAGTTTGCCCCAACTATGCAGTTCATTCACGGTGTGCAACAAGATATGACATATGGGATGGTGTGGAACTGGAAGGGAAAGCTGAGAATATTGAGGATATTGCGCCATTTAAGGTGGTTGGGGATGACTTGATTCGTCATTTTAGTCACAGCAAACATTCTTTAAGACTCCACAAGAACAATATCATTTATGATGATAGTACACGATGTGAAGCATGTGGCCATCCAGTCGAATTTGGTCGAATATACAATTGTGAGGAATGCTGTTTCATTCTTCATGAAAAGTGTGCTAATCTCCCTATGAAGAAAAGGCTTGTCTTTTCTACCTTACCATTCCTATTACTGGGACCGGGTAATGATGTTTGCAAGGTTTTAGATTGCAAGTTATGTGGAATGTTTTTTACTGGTTTCGAGTACAAGTCCCAAGAAAGGAGGCAAAGCGATATCGATGTACATTGTGGTTCCCTTACGGAGCCGTTCGTCCATGATGGCCATTTACATCCCTTATATTTTGATCAAAAGCAAAAGGAGCTTCCTTGCAATGCTTGTCAAAAAACCATAAGAGATTATATGCTTTGTTGTGCTGATTGTGACTTCAATTTGTGTTTATGGTGCGCTAGTCTGCCAAAAAAGATAAGGCATAGCAACGATGAGCACATTCTCACGCTATGTTGTGGTGAAGAAGCAAATGGAAAATATTGGTGTGATATCTGTGAGGCAGAGTTGGATCCAAGTAAATGGTTCTATACATGCTTTGGTTGTGGAGGCACATTGCATGTGGAATGCGTACTAGGAGATTTCTCACGTCTCATGCCAGGATGCACCATTGACTACCGGGTATATACCGTGGAGGTGGTTTTCAATAATCACAACACGCGACCAATGTGCAGCCGGTGTCACTCTCGATGCAAGGTTTCTGTAATCCTTAAGTTTCGTGAGGGTAACATTGTATATTTTTTTTGTTCACGTTCATGTTTTCTGATGCATTTCTCATATTATCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2

Protein Analysis

656

Amino Acids

74.89

Weight (kDa)

6.92

Isoelectric Point (pI)

51.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 63 - 108 3.9e-07 C1 domain
C1_2 PF03107 122 - 165 1.9e-07 C1 domain
C1_2 PF03107 174 - 223 3.3e-08 C1 domain
C1_2 PF03107 235 - 278 2.3e-08 C1 domain
C1_2 PF03107 287 - 335 1e-09 C1 domain
C1_2 PF03107 370 - 419 2.7e-11 C1 domain
C1_2 PF03107 537 - 585 5e-10 C1 domain
C1-like_CT PF22926 605 - 648 4.4e-14 C1 domain-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 58
AccB1I GGYRCC 1 cut(s) 98
AccI GTMKAC 2 cut(s) 744, 834
AccII CGCG 2 cut(s) 33, 1843
AciI CCGC 3 cut(s) 341, 611, 815
AclI AACGTT 1 cut(s) 759
AclWI GGATC 4 cut(s) 122, 451, 1688, 1701
AcoI YGGCCR 2 cut(s) 1186, 1456
AcsI RAATTY 2 cut(s) 435, 1199
AcuI CTGAAG 2 cut(s) 410, 785
AcvI CACGTG 1 cut(s) 484
AdeI CACNNNGTG 3 cut(s) 654, 1001, 1175
AfaI GTAC 8 cut(s) 18, 62, 278, 476, 1168, 1382, 1419, 1755
AfiI CCNNNNNNNGG 2 cut(s) 1309, 1395
AflII CTTAAG 1 cut(s) 1892
AflIII ACRYGT 1 cut(s) 296
AgsI TTSAA 6 cut(s) 47, 353, 913, 949, 1564, 1828
AjiI CACGTC 1 cut(s) 1772
AjnI CCWGG 2 cut(s) 901, 1780
AluBI AGCT 5 cut(s) 163, 347, 956, 1049, 1498
AluI AGCT 5 cut(s) 163, 347, 956, 1049, 1498
Alw21I GWGCWC 2 cut(s) 165, 1623
Alw26I GTCTC 1 cut(s) 1778
AlwI GGATC 4 cut(s) 122, 451, 1688, 1701
AoxI GGCC 2 cut(s) 1186, 1456
ApeKI GCWGC 2 cut(s) 489, 1854
ApoI RAATTY 2 cut(s) 435, 1199
AspLEI GCGC 2 cut(s) 1072, 1583
AspS9I GGNCC 3 cut(s) 817, 899, 1313
AsuC2I CCSGG 2 cut(s) 1317, 1802
AsuHPI GGTGA 2 cut(s) 666, 1655
AvaII GGWCC 3 cut(s) 817, 899, 1313
BalI TGGCCA 2 cut(s) 1188, 1458
BamHI GGATCC 1 cut(s) 1693
BanI GGYRCC 1 cut(s) 98
BanII GRGCYC 1 cut(s) 165
BbrPI CACGTG 1 cut(s) 484
BbsI GAAGAC 4 cut(s) 376, 590, 710, 791
Bbv12I GWGCWC 2 cut(s) 165, 1623
BbvI GCAGC 2 cut(s) 476, 1866
BceAI ACGGC 2 cut(s) 127, 1426
BcgI CGANNNNNNTGC 2 cut(s) 1833, 1867
BciT130I CCWGG 2 cut(s) 903, 1782
BclI TGATCA 3 cut(s) 532, 868, 1480
BcnI CCSGG 2 cut(s) 1317, 1802
BcoDI GTCTC 1 cut(s) 1778
BfaI CTAG 3 cut(s) 72, 1584, 1757
BfrI CTTAAG 1 cut(s) 1892
BfuAI ACCTGC 1 cut(s) 58
BisI GCNGC 2 cut(s) 490, 1855
BlsI GCNGC 2 cut(s) 491, 1856
BmcAI AGTACT 1 cut(s) 278
Bme1390I CCNGG 4 cut(s) 903, 1317, 1782, 1802
Bme18I GGWCC 3 cut(s) 817, 899, 1313
BmgBI CACGTC 1 cut(s) 1772
BmgT120I GGNCC 3 cut(s) 817, 899, 1313
BmiI GGNNCC 5 cut(s) 100, 1314, 1429, 1440, 1695
BmrFI CCNGG 4 cut(s) 903, 1317, 1782, 1802
BmrI ACTGGG 1 cut(s) 1319
BmsI GCATC 8 cut(s) 132, 455, 501, 724, 901, 1775, 1862, 1938
BmuI ACTGGG 1 cut(s) 1319
BpiI GAAGAC 4 cut(s) 376, 590, 710, 791
BpuEI CTTGAG 1 cut(s) 828
BpuMI CCSGG 2 cut(s) 1317, 1802
Bsa29I ATCGAT 1 cut(s) 1413
BsaAI YACGTR 1 cut(s) 484
BsaJI CCNNGG 3 cut(s) 56, 902, 1812
Bsc4I CCNNNNNNNGG 2 cut(s) 1309, 1395
Bse118I RCCGGY 1 cut(s) 1857
Bse1I ACTGG 4 cut(s) 1041, 1193, 1314, 1375
Bse3DI GCAATG 3 cut(s) 130, 1513, 1736
BseBI CCWGG 2 cut(s) 903, 1782
BseCI ATCGAT 1 cut(s) 1413
BseDI CCNNGG 3 cut(s) 56, 902, 1812
BseLI CCNNNNNNNGG 2 cut(s) 1309, 1395
BseMI GCAATG 3 cut(s) 130, 1513, 1736
BseMII CTCAG 2 cut(s) 162, 1041
BseNI ACTGG 4 cut(s) 1041, 1193, 1314, 1375
BseRI GAGGAG 2 cut(s) 45, 753
BseXI GCAGC 2 cut(s) 476, 1866
BsgI GTGCAG 2 cut(s) 733, 1873
Bsh1236I CGCG 2 cut(s) 33, 1843
BshFI GGCC 2 cut(s) 1188, 1458
BshNI GGYRCC 1 cut(s) 98
BshVI ATCGAT 1 cut(s) 1413
BsiHKAI GWGCWC 2 cut(s) 165, 1623
BsiSI CCGG 3 cut(s) 1316, 1801, 1858
BslFI GGGAC 2 cut(s) 1326, 1372
BslI CCNNNNNNNGG 2 cut(s) 1309, 1395
BsmAI GTCTC 1 cut(s) 1778
BsmBI CGTCTC 1 cut(s) 1778
BsmFI GGGAC 2 cut(s) 1326, 1372
BsmI GAATGC 2 cut(s) 1232, 1754
BsnI GGCC 2 cut(s) 1188, 1458
Bsp1286I GDGCHC 2 cut(s) 165, 1623
Bsp1407I TGTACA 1 cut(s) 1417
Bsp143I GATC 7 cut(s) 127, 174, 443, 532, 868, 1480, 1693
Bsp68I TCGCGA 1 cut(s) 33
BspACI CCGC 3 cut(s) 341, 611, 815
BspANI GGCC 2 cut(s) 1188, 1458
BspCNI CTCAG 2 cut(s) 163, 1042
BspDI ATCGAT 1 cut(s) 1413
BspFNI CGCG 2 cut(s) 33, 1843
BspHI TCATGA 2 cut(s) 865, 1243
BspLI GGNNCC 5 cut(s) 100, 1314, 1429, 1440, 1695
BspMI ACCTGC 1 cut(s) 58
BspPI GGATC 4 cut(s) 122, 451, 1688, 1701
BspT107I GGYRCC 1 cut(s) 98
BspTI CTTAAG 1 cut(s) 1892
BsrDI GCAATG 3 cut(s) 130, 1513, 1736
BsrFI RCCGGY 1 cut(s) 1857
BsrGI TGTACA 1 cut(s) 1417
BsrI ACTGG 4 cut(s) 1041, 1193, 1314, 1375
BssAI RCCGGY 1 cut(s) 1857
BssECI CCNNGG 3 cut(s) 56, 902, 1812
BssMI GATC 7 cut(s) 127, 174, 443, 532, 868, 1480, 1693
Bst2UI CCWGG 2 cut(s) 903, 1782
Bst4CI ACNGT 4 cut(s) 654, 917, 999, 1813
Bst6I CTCTTC 2 cut(s) 48, 216
BstAFI CTTAAG 1 cut(s) 1892
BstAUI TGTACA 1 cut(s) 1417
BstBAI YACGTR 1 cut(s) 484
BstC8I GCNNGC 2 cut(s) 270, 345
BstDEI CTNAG 3 cut(s) 171, 967, 1050
BstDSI CCRYGG 1 cut(s) 1812
BstFNI CGCG 2 cut(s) 33, 1843
BstHHI GCGC 2 cut(s) 1072, 1583
BstKTI GATC 7 cut(s) 130, 177, 446, 535, 871, 1483, 1696
BstMAI GTCTC 1 cut(s) 1778
BstMBI GATC 7 cut(s) 127, 174, 443, 532, 868, 1480, 1693
BstMWI GCNNNNNNNGC 4 cut(s) 120, 610, 972, 1495
BstNI CCWGG 2 cut(s) 903, 1782
BstNSI RCATGY 4 cut(s) 300, 1185, 1719, 1745
BstSCI CCNGG 4 cut(s) 901, 1315, 1780, 1800
BstUI CGCG 2 cut(s) 33, 1843
BstV1I GCAGC 2 cut(s) 476, 1866
BstV2I GAAGAC 4 cut(s) 376, 590, 710, 791
BstX2I RGATCY 1 cut(s) 1693
BstXI CCANNNNNNTGG 2 cut(s) 950, 1704
BstYI RGATCY 1 cut(s) 1693
Bsu15I ATCGAT 1 cut(s) 1413
BsuRI GGCC 2 cut(s) 1188, 1458
BsuTUI ATCGAT 1 cut(s) 1413
BtgI CCRYGG 1 cut(s) 1812
BtgZI GCGATG 1 cut(s) 857
BtrI CACGTC 1 cut(s) 1772
BtsIMutI CAGTG 2 cut(s) 650, 809
BtuMI TCGCGA 1 cut(s) 33
BveI ACCTGC 1 cut(s) 58
Cac8I GCNNGC 2 cut(s) 270, 345
CciI TCATGA 2 cut(s) 865, 1243
CfoI GCGC 2 cut(s) 1072, 1583
Cfr10I RCCGGY 1 cut(s) 1857
Cfr13I GGNCC 3 cut(s) 817, 899, 1313
ClaI ATCGAT 1 cut(s) 1413
CseI GACGC 1 cut(s) 715
Csp6I GTAC 8 cut(s) 17, 61, 277, 475, 1167, 1381, 1418, 1754
CspCI CAANNNNNGTGG 2 cut(s) 1336, 1371
CviQI GTAC 8 cut(s) 17, 61, 277, 475, 1167, 1381, 1418, 1754
DdeI CTNAG 3 cut(s) 171, 967, 1050
DpnI GATC 7 cut(s) 129, 176, 445, 534, 870, 1482, 1695
DpnII GATC 7 cut(s) 127, 174, 443, 532, 868, 1480, 1693
DraIII CACNNNGTG 3 cut(s) 654, 1001, 1175
EaeI YGGCCR 2 cut(s) 1186, 1456
Eam1104I CTCTTC 2 cut(s) 48, 216
EarI CTCTTC 2 cut(s) 48, 216
Ecl136II GAGCTC 1 cut(s) 163
Eco24I GRGCYC 1 cut(s) 165
Eco32I GATATC 2 cut(s) 1411, 1675
Eco47I GGWCC 3 cut(s) 817, 899, 1313
Eco53kI GAGCTC 1 cut(s) 163
Eco57I CTGAAG 2 cut(s) 410, 785
Eco72I CACGTG 1 cut(s) 484
EcoICRI GAGCTC 1 cut(s) 163
EcoRI GAATTC 1 cut(s) 435
EcoRII CCWGG 2 cut(s) 901, 1780
EcoRV GATATC 2 cut(s) 1411, 1675
EcoT22I ATGCAT 2 cut(s) 147, 1953
EcoT38I GRGCYC 1 cut(s) 165
Esp3I CGTCTC 1 cut(s) 1778
FaqI GGGAC 2 cut(s) 1326, 1372
FauNDI CATATG 2 cut(s) 217, 1019
FbaI TGATCA 3 cut(s) 532, 868, 1480
FblI GTMKAC 2 cut(s) 744, 834
Fnu4HI GCNGC 2 cut(s) 490, 1855
FriOI GRGCYC 1 cut(s) 165
Fsp4HI GCNGC 2 cut(s) 490, 1855
FspBI CTAG 3 cut(s) 72, 1584, 1757
GlaI GCGC 2 cut(s) 1071, 1582
GluI GCNGC 2 cut(s) 490, 1855
HaeIII GGCC 2 cut(s) 1188, 1458
HapII CCGG 3 cut(s) 1316, 1801, 1858
HgaI GACGC 1 cut(s) 715
HhaI GCGC 2 cut(s) 1072, 1583
Hin6I GCGC 2 cut(s) 1070, 1581
HinP1I GCGC 2 cut(s) 1070, 1581
HinfI GANTC 5 cut(s) 554, 560, 741, 1099, 1134
HpaII CCGG 3 cut(s) 1316, 1801, 1858
HphI GGTGA 2 cut(s) 666, 1655
Hpy166II GTNNAC 4 cut(s) 745, 835, 1169, 1931
Hpy188I TCNGA 4 cut(s) 172, 532, 559, 1947
Hpy188III TCNNGA 8 cut(s) 32, 388, 502, 694, 866, 1244, 1869, 1901
Hpy8I GTNNAC 4 cut(s) 745, 835, 1169, 1931
Hpy99I CGWCG 1 cut(s) 554
HpyAV CCTTC 1 cut(s) 1034
HpyCH4III ACNGT 4 cut(s) 654, 917, 999, 1813
HpyCH4IV ACGT 4 cut(s) 483, 759, 1771, 1933
HpyF10VI GCNNNNNNNGC 4 cut(s) 120, 610, 972, 1495
HpyF3I CTNAG 3 cut(s) 171, 967, 1050
HpySE526I ACGT 4 cut(s) 483, 759, 1771, 1933
HspAI GCGC 2 cut(s) 1070, 1581
Ksp22I TGATCA 3 cut(s) 532, 868, 1480
Kzo9I GATC 7 cut(s) 127, 174, 443, 532, 868, 1480, 1693
LmnI GCTCC 5 cut(s) 58, 168, 953, 1438, 1495
Lsp1109I GCAGC 2 cut(s) 476, 1866
LweI GCATC 8 cut(s) 132, 455, 501, 724, 901, 1775, 1862, 1938
MaeI CTAG 3 cut(s) 72, 1584, 1757
MaeII ACGT 4 cut(s) 483, 759, 1771, 1933
MaeIII GTNAC 7 cut(s) 91, 524, 755, 1112, 1556, 1862, 1907
MalI GATC 7 cut(s) 129, 176, 445, 534, 870, 1482, 1695
MboI GATC 7 cut(s) 127, 174, 443, 532, 868, 1480, 1693
MfeI CAATTG 1 cut(s) 1216
MflI RGATCY 1 cut(s) 1693
MhlI GDGCHC 2 cut(s) 165, 1623
MlsI TGGCCA 2 cut(s) 1188, 1458
MluCI AATT 5 cut(s) 435, 944, 1199, 1216, 1564
MluNI TGGCCA 2 cut(s) 1188, 1458
MlyI GAGTC 2 cut(s) 750, 1128
MmeI TCCRAC 1 cut(s) 1671
Mox20I TGGCCA 2 cut(s) 1188, 1458
Mph1103I ATGCAT 2 cut(s) 147, 1953
MscI TGGCCA 2 cut(s) 1188, 1458
MseI TTAA 3 cut(s) 1077, 1130, 1893
MslI CAYNNNNRTG 1 cut(s) 1936
Msp20I TGGCCA 2 cut(s) 1188, 1458
MspCI CTTAAG 1 cut(s) 1892
MspI CCGG 3 cut(s) 1316, 1801, 1858
MspR9I CCNGG 4 cut(s) 903, 1317, 1782, 1802
MunI CAATTG 1 cut(s) 1216
Mva1269I GAATGC 2 cut(s) 1232, 1754
MvaI CCWGG 2 cut(s) 903, 1782
MvnI CGCG 2 cut(s) 33, 1843
MwoI GCNNNNNNNGC 4 cut(s) 120, 610, 972, 1495
NciI CCSGG 2 cut(s) 1317, 1802
NdeI CATATG 2 cut(s) 217, 1019
NdeII GATC 7 cut(s) 127, 174, 443, 532, 868, 1480, 1693
NlaIV GGNNCC 5 cut(s) 100, 1314, 1429, 1440, 1695
NmuCI GTSAC 4 cut(s) 524, 1112, 1556, 1862
NruI TCGCGA 1 cut(s) 33
NsiI ATGCAT 2 cut(s) 147, 1953
NspI RCATGY 4 cut(s) 300, 1185, 1719, 1745
PagI TCATGA 2 cut(s) 865, 1243
PciI ACATGT 1 cut(s) 296
PctI GAATGC 2 cut(s) 1232, 1754
PfeI GAWTC 3 cut(s) 554, 560, 1099
PkrI GCNGC 2 cut(s) 491, 1856
PleI GAGTC 2 cut(s) 749, 1128
PmaCI CACGTG 1 cut(s) 484
PmlI CACGTG 1 cut(s) 484
PpsI GAGTC 2 cut(s) 749, 1128
Ppu21I YACGTR 1 cut(s) 484
PscI ACATGT 1 cut(s) 296
Psp124BI GAGCTC 1 cut(s) 165
Psp1406I AACGTT 1 cut(s) 759
Psp6I CCWGG 2 cut(s) 901, 1780
PspCI CACGTG 1 cut(s) 484
PspGI CCWGG 2 cut(s) 901, 1780
PspN4I GGNNCC 5 cut(s) 100, 1314, 1429, 1440, 1695
PspPI GGNCC 3 cut(s) 817, 899, 1313
PsuI RGATCY 1 cut(s) 1693
RruI TCGCGA 1 cut(s) 33
RsaI GTAC 8 cut(s) 18, 62, 278, 476, 1168, 1382, 1419, 1755
RsaNI GTAC 8 cut(s) 17, 61, 277, 475, 1167, 1381, 1418, 1754
RseI CAYNNNNRTG 1 cut(s) 1936
SacI GAGCTC 1 cut(s) 165
SaqAI TTAA 3 cut(s) 1077, 1130, 1893
SatI GCNGC 2 cut(s) 490, 1855
Sau3AI GATC 7 cut(s) 127, 174, 443, 532, 868, 1480, 1693
Sau96I GGNCC 3 cut(s) 817, 899, 1313
ScaI AGTACT 1 cut(s) 278
SchI GAGTC 2 cut(s) 750, 1128
ScrFI CCNGG 4 cut(s) 903, 1317, 1782, 1802
SduI GDGCHC 2 cut(s) 165, 1623
SfaNI GCATC 8 cut(s) 132, 455, 501, 724, 901, 1775, 1862, 1938
SinI GGWCC 3 cut(s) 817, 899, 1313
SmiMI CAYNNNNRTG 1 cut(s) 1936
SmlI CTYRAG 2 cut(s) 843, 1892
SmoI CTYRAG 2 cut(s) 843, 1892
Sse9I AATT 5 cut(s) 435, 944, 1199, 1216, 1564
SsiI CCGC 3 cut(s) 341, 611, 815
SspI AATATT 2 cut(s) 1057, 1664
SspMI CTAG 3 cut(s) 72, 1584, 1757
SstI GAGCTC 1 cut(s) 165
StyD4I CCNGG 4 cut(s) 901, 1315, 1780, 1800
TaaI ACNGT 4 cut(s) 654, 917, 999, 1813
TaiI ACGT 4 cut(s) 486, 762, 1774, 1936
TaqI TCGA 8 cut(s) 503, 552, 693, 1197, 1207, 1377, 1413, 1870
TasI AATT 5 cut(s) 435, 944, 1199, 1216, 1564
TatI WGTACW 6 cut(s) 16, 276, 474, 1166, 1380, 1417
TfiI GAWTC 3 cut(s) 554, 560, 1099
Tru1I TTAA 3 cut(s) 1077, 1130, 1893
Tru9I TTAA 3 cut(s) 1077, 1130, 1893
TscAI CASTG 2 cut(s) 657, 809
TseFI GTSAC 4 cut(s) 524, 1112, 1556, 1862
TseI GCWGC 2 cut(s) 489, 1854
Tsp45I GTSAC 4 cut(s) 524, 1112, 1556, 1862
TspDTI ATGAA 9 cut(s) 234, 344, 444, 980, 1225, 1232, 1260, 1283, 1926
TspGWI ACGGA 1 cut(s) 1451
TspRI CASTG 2 cut(s) 657, 809
Vha464I CTTAAG 1 cut(s) 1892
VpaK11BI GGWCC 3 cut(s) 817, 899, 1313
XapI RAATTY 2 cut(s) 435, 1199
XceI RCATGY 4 cut(s) 300, 1185, 1719, 1745
XmiI GTMKAC 2 cut(s) 744, 834
XspI CTAG 3 cut(s) 72, 1584, 1757
ZrmI AGTACT 1 cut(s) 278
Zsp2I ATGCAT 2 cut(s) 147, 1953
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.