AT2G04680

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Forward (+)
1640058 .. 1642209
2152 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G04680.1

Sequence Viewer

Length: 1974 bp
ATGGAAATAGTGGAGGTATCACCAATTCACAAACATCCTTTGTTACCTATTACTCGTTTTTCTCGTGAACATTGTAAATGTAATGTGTGTGGGTCTGTTGGTTACATTTACGGAGGCTACTGTTGCAATGAGGTGGGATGTGAATCCATGTTTCATAAAGAGTGTGTTGAGTCTTTGTCAGAAATCAAGCACACTTCTCATCCTGATCATCCTCTCAAGCTGCTCATAAGTGACAAAGCATCATTCTGTAGTCGGTGTGAAGGTCGGTTTGAAAACGGTTATATATGTTCTATTTGCGACTTCAAGTTGGATTTTCGTTGTGCTAAAGGACCTGCCCCACTCCTTATTCTTGAAAAATCCAATCTGCACGAGCATCTACTTGAATTCTTCGTGGGATGGCACTCTTGGAAGGGACATAGAGAGTGCAAAGCGTGCGGCGGTGCGGGTTTCCGCGGTTATCGATGGTATGGATGTTATCAATGTGATACACTCTTCCATGGAGAATGTGCTGAGTTTTTTCCAGAAGCAAAACACACTTCTCACCCGCAACACACACTCAAACACATCACATCTGAAGAAGCACCCGATTACGCCGACAACAAGTGTCTTCTTTGCGAGGAGGAGTTTGATCAACAACATCCCAAAATTCACCATTGTGATGTTTGTAATTTCACCATATGTAGAGCATGTATGAAAAACGCACCACCGGTTCGTATTGAAAGCCTTACAACCCATGAACATCAACTACATCTCGTTCCAAGACGCATTGATTTCACTTGCAATGCTTGCGGGACGCTAGGTGACCGAAGTCCTTACTTTTGTCTTCAATGCAATTTCATGATTCATCGCCAGTGTATCGATTTACCACGGGTCATAAACATCAACCGCCACGATCACCGCATCTCTTACACCCGTCGCCTTGGACATGGAGAGTGGAAATGCAAAGTCTGCCGCAAAAAAGTGGATGGGTTCTACGGGGCTTATACTTGCCTCAAATGTCCTAGTTTTGTTGTTCATTCACTATGTGCAACAAGAAACGATGTGTGGGACATGATAGAGCTAGAAGGGATGCAAGAAGAAGAGGAAATTGCGCCATACGAGATGATTGATGCTAACACGATAAAACATTTCAGCCATGATCATAACCTACAAATCAACAATGATGGCCATGGCAGGATTCAACCTGAAAATATAGTTTGTGAAGCGTGTGTGTTCCAGATCTTGTCAGAACCGTTCTACAGTTGCAACCAATGTAGTTTTATACTCCACGAAAAATGTGCAAATCATCCACGGAAGAAACGCCACGTGTGCAACAACACGTCATTCATACTATTCACAGATTCTTGCAACAAAGCTAACGCTTCGTGTGGTCTTTGTAAACAACATTTCACTGGTTTCAGATACGAATCAGGCCCTTATGTTACTATAGATGTACGATGCGCTGCAATTTTGGATACAATTGAGCACGGAAGCCATCAACATCCTTTATATTACTACACTACATTTGACTGGAAGCCTTGTAGCCGATGCAGAGAGGAGGGCGCCGTTTTATTTCGTTGTGATGAGTGTGACTACATTTTGGATGGAAACTGTGCTCTTTTTCCAAAAAAGGTAATGAGAAATAGATACGATGATCATCTTCTCTTCTTGTCTTTCGGTGACAAGAATGTGAGTGGTGACTATTGGTGTGAAGCATGTGAAACGAAAGTGAACCCAAAGGAATGGTTCTATACATGCAACGATTGTGGAACCATATTACATATATCTTGTGTTGTGGGAGATTTCTCATATATCATGCCAGGTTCTCATATAACAACATGGAGAGCTAACGTGGTATCCAACACCTCTATTTGTAGACCAGTTTGCTATATGTGTAACTCTCGATGCAAACTTCCTTCTGTTCTTAAGCTTTCTGACACCAAAGTTGATGTATACCTTTGTTCTTTCAAATGTGCCTATTTTATTAGGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

657

Amino Acids

75.75

Weight (kDa)

6.79

Isoelectric Point (pI)

43.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 66 - 108 1.5e-09 C1 domain
C1_2 PF03107 122 - 170 7.2e-06 C1 domain
C1_2 PF03107 244 - 286 1.3e-11 C1 domain
C1_2 PF03107 295 - 343 4.1e-12 C1 domain
C1_2 PF03107 377 - 427 8.5e-11 C1 domain
C1_2 PF03107 491 - 532 2.2e-06 C1 domain
C1_2 PF03107 542 - 591 4.4e-13 C1 domain
C1-like_CT PF22926 610 - 652 7.6e-14 C1 domain-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 340
AccB1I GGYRCC 1 cut(s) 1541
AccI GTMKAC 2 cut(s) 1855, 1932
AccII CGCG 1 cut(s) 453
AcoI YGGCCR 1 cut(s) 1165
AcsI RAATTY 2 cut(s) 383, 645
AcuI CTGAAG 1 cut(s) 594
AcvI CACGTG 1 cut(s) 1306
AcyI GRCGYC 1 cut(s) 1542
AdeI CACNNNGTG 1 cut(s) 1025
AfaI GTAC 1 cut(s) 1434
AflII CTTAAG 1 cut(s) 1904
AflIII ACRYGT 2 cut(s) 1305, 1317
AgeI ACCGGT 1 cut(s) 706
AgsI TTSAA 8 cut(s) 272, 304, 353, 383, 719, 827, 1181, 1948
AjiI CACGTC 1 cut(s) 1320
AjnI CCWGG 1 cut(s) 1798
AleI CACNNNNGTG 1 cut(s) 654
AluBI AGCT 5 cut(s) 220, 1060, 1355, 1826, 1909
AluI AGCT 5 cut(s) 220, 1060, 1355, 1826, 1909
Alw21I GWGCWC 2 cut(s) 1467, 1597
AoxI GGCC 2 cut(s) 1165, 1411
ApeKI GCWGC 2 cut(s) 220, 1442
ApoI RAATTY 2 cut(s) 383, 645
AsiGI ACCGGT 1 cut(s) 706
AspLEI GCGC 3 cut(s) 1093, 1442, 1544
AspS9I GGNCC 2 cut(s) 329, 1412
AsuHPI GGTGA 8 cut(s) 12, 533, 641, 664, 812, 887, 1670, 1688
AvaII GGWCC 1 cut(s) 329
BalI TGGCCA 1 cut(s) 1167
BanI GGYRCC 1 cut(s) 1541
BauI CACGAG 2 cut(s) 63, 368
BbrPI CACGTG 1 cut(s) 1306
BbsI GAAGAC 2 cut(s) 599, 815
Bbv12I GWGCWC 2 cut(s) 1467, 1597
BbvI GCAGC 2 cut(s) 207, 1429
BccI CCATC 6 cut(s) 390, 456, 959, 1157, 1482, 1577
BceAI ACGGC 1 cut(s) 1529
BcgI CGANNNNNNTGC 2 cut(s) 1259, 1293
BciT130I CCWGG 1 cut(s) 1800
BciVI GTATCC 2 cut(s) 1447, 1846
BclI TGATCA 4 cut(s) 205, 628, 1138, 1633
BfaI CTAG 3 cut(s) 797, 1002, 1061
BfmI CTRYAG 3 cut(s) 247, 1237, 1425
BfoI RGCGCY 1 cut(s) 1545
BfrI CTTAAG 1 cut(s) 1904
BfuAI ACCTGC 1 cut(s) 340
BfuI GTATCC 2 cut(s) 1447, 1846
BglII AGATCT 1 cut(s) 1218
BisI GCNGC 4 cut(s) 221, 436, 952, 1443
BlsI GCNGC 4 cut(s) 222, 437, 953, 1444
Bme1390I CCNGG 1 cut(s) 1800
Bme18I GGWCC 1 cut(s) 329
BmgBI CACGTC 1 cut(s) 1320
BmgT120I GGNCC 2 cut(s) 329, 1412
BmiI GGNNCC 2 cut(s) 1543, 1750
BmrFI CCNGG 1 cut(s) 1800
BmsI GCATC 8 cut(s) 248, 382, 909, 1059, 1099, 1427, 1517, 1874
BoxI GACNNNNGTC 1 cut(s) 807
BpiI GAAGAC 2 cut(s) 599, 815
BpuEI CTTGAG 1 cut(s) 200
Bsa29I ATCGAT 2 cut(s) 460, 858
BsaAI YACGTR 1 cut(s) 1306
BsaBI GATNNNNATC 3 cut(s) 142, 1405, 1635
BsaHI GRCGYC 1 cut(s) 1542
BsaJI CCNNGG 6 cut(s) 451, 496, 866, 919, 1168, 1289
BsaWI WCCGGW 1 cut(s) 706
Bse118I RCCGGY 1 cut(s) 706
Bse1I ACTGG 4 cut(s) 850, 1396, 1514, 1859
Bse3DI GCAATG 2 cut(s) 133, 787
Bse8I GATNNNNATC 3 cut(s) 142, 1405, 1635
BseBI CCWGG 1 cut(s) 1800
BseCI ATCGAT 2 cut(s) 460, 858
BseDI CCNNGG 6 cut(s) 451, 496, 866, 919, 1168, 1289
BseJI GATNNNNATC 3 cut(s) 142, 1405, 1635
BseMI GCAATG 2 cut(s) 133, 787
BseMII CTCAG 1 cut(s) 501
BseNI ACTGG 4 cut(s) 850, 1396, 1514, 1859
BseRI GAGGAG 3 cut(s) 632, 635, 1550
BseXI GCAGC 2 cut(s) 207, 1429
BsgI GTGCAG 1 cut(s) 350
Bsh1236I CGCG 1 cut(s) 453
BshFI GGCC 2 cut(s) 1167, 1413
BshNI GGYRCC 1 cut(s) 1541
BshTI ACCGGT 1 cut(s) 706
BshVI ATCGAT 2 cut(s) 460, 858
BsiHKAI GWGCWC 2 cut(s) 1467, 1597
BsiSI CCGG 1 cut(s) 707
BslFI GGGAC 3 cut(s) 426, 805, 1061
BsmFI GGGAC 3 cut(s) 426, 805, 1061
BsnI GGCC 2 cut(s) 1167, 1413
Bsp1286I GDGCHC 2 cut(s) 1467, 1597
Bsp143I GATC 6 cut(s) 205, 628, 892, 1138, 1218, 1633
Bsp19I CCATGG 2 cut(s) 496, 1168
BspANI GGCC 2 cut(s) 1167, 1413
BspCNI CTCAG 1 cut(s) 502
BspDI ATCGAT 2 cut(s) 460, 858
BspFNI CGCG 1 cut(s) 453
BspHI TCATGA 1 cut(s) 837
BspLI GGNNCC 2 cut(s) 1543, 1750
BspMI ACCTGC 1 cut(s) 340
BspT107I GGYRCC 1 cut(s) 1541
BspTI CTTAAG 1 cut(s) 1904
BsrDI GCAATG 2 cut(s) 133, 787
BsrFI RCCGGY 1 cut(s) 706
BsrI ACTGG 4 cut(s) 850, 1396, 1514, 1859
BssAI RCCGGY 1 cut(s) 706
BssECI CCNNGG 6 cut(s) 451, 496, 866, 919, 1168, 1289
BssMI GATC 6 cut(s) 205, 628, 892, 1138, 1218, 1633
BssNAI GTATAC 1 cut(s) 1933
BssNI GRCGYC 1 cut(s) 1542
BssSI CACGAG 2 cut(s) 63, 368
BssT1I CCWWGG 3 cut(s) 496, 919, 1168
Bst1107I GTATAC 1 cut(s) 1933
Bst2BI CACGAG 2 cut(s) 63, 368
Bst2UI CCWGG 1 cut(s) 1800
Bst4CI ACNGT 5 cut(s) 122, 278, 1233, 1241, 1592
Bst6I CTCTTC 3 cut(s) 497, 1074, 1649
BstACI GRCGYC 1 cut(s) 1542
BstAFI CTTAAG 1 cut(s) 1904
BstAPI GCANNNNNTGC 3 cut(s) 432, 786, 948
BstBAI YACGTR 1 cut(s) 1306
BstC8I GCNNGC 2 cut(s) 433, 787
BstDEI CTNAG 1 cut(s) 510
BstDSI CCRYGG 5 cut(s) 451, 496, 866, 1168, 1289
BstEII GGTNACC 1 cut(s) 800
BstFNI CGCG 1 cut(s) 453
BstH2I RGCGCY 1 cut(s) 1545
BstHHI GCGC 3 cut(s) 1093, 1442, 1544
BstKTI GATC 6 cut(s) 208, 631, 895, 1141, 1221, 1636
BstMBI GATC 6 cut(s) 205, 628, 892, 1138, 1218, 1633
BstMWI GCNNNNNNNGC 5 cut(s) 123, 432, 786, 948, 1308
BstNI CCWGG 1 cut(s) 1800
BstNSI RCATGY 3 cut(s) 690, 1698, 1737
BstPAI GACNNNNGTC 1 cut(s) 807
BstPI GGTNACC 1 cut(s) 800
BstSCI CCNGG 1 cut(s) 1798
BstSFI CTRYAG 3 cut(s) 247, 1237, 1425
BstUI CGCG 1 cut(s) 453
BstV1I GCAGC 2 cut(s) 207, 1429
BstV2I GAAGAC 2 cut(s) 599, 815
BstX2I RGATCY 1 cut(s) 1218
BstXI CCANNNNNNTGG 1 cut(s) 1722
BstYI RGATCY 1 cut(s) 1218
BstZ17I GTATAC 1 cut(s) 1933
Bsu15I ATCGAT 2 cut(s) 460, 858
BsuI GTATCC 2 cut(s) 1447, 1846
BsuRI GGCC 2 cut(s) 1167, 1413
BsuTUI ATCGAT 2 cut(s) 460, 858
BtgI CCRYGG 5 cut(s) 451, 496, 866, 1168, 1289
BtgZI GCGATG 1 cut(s) 830
BtrI CACGTC 1 cut(s) 1320
BtsIMutI CAGTG 2 cut(s) 857, 1389
BveI ACCTGC 1 cut(s) 340
Cac8I GCNNGC 2 cut(s) 433, 787
CciI TCATGA 1 cut(s) 837
CfoI GCGC 3 cut(s) 1093, 1442, 1544
Cfr10I RCCGGY 1 cut(s) 706
Cfr13I GGNCC 2 cut(s) 329, 1412
Cfr42I CCGCGG 1 cut(s) 454
ClaI ATCGAT 2 cut(s) 460, 858
CseI GACGC 2 cut(s) 771, 802
Csp6I GTAC 1 cut(s) 1433
CspAI ACCGGT 1 cut(s) 706
CspCI CAANNNNNGTGG 2 cut(s) 1726, 1761
CviQI GTAC 1 cut(s) 1433
DdeI CTNAG 1 cut(s) 510
DinI GGCGCC 1 cut(s) 1543
DpnI GATC 6 cut(s) 207, 630, 894, 1140, 1220, 1635
DpnII GATC 6 cut(s) 205, 628, 892, 1138, 1218, 1633
DraIII CACNNNGTG 1 cut(s) 1025
EaeI YGGCCR 1 cut(s) 1165
Eam1104I CTCTTC 3 cut(s) 497, 1074, 1649
EarI CTCTTC 3 cut(s) 497, 1074, 1649
Eco130I CCWWGG 3 cut(s) 496, 919, 1168
Eco47I GGWCC 1 cut(s) 329
Eco57I CTGAAG 1 cut(s) 594
Eco72I CACGTG 1 cut(s) 1306
Eco91I GGTNACC 1 cut(s) 800
EcoO109I RGGNCCY 2 cut(s) 329, 1412
EcoO65I GGTNACC 1 cut(s) 800
EcoRI GAATTC 1 cut(s) 383
EcoRII CCWGG 1 cut(s) 1798
EcoT14I CCWWGG 3 cut(s) 496, 919, 1168
EgeI GGCGCC 1 cut(s) 1543
EheI GGCGCC 1 cut(s) 1543
ErhI CCWWGG 3 cut(s) 496, 919, 1168
FaqI GGGAC 3 cut(s) 426, 805, 1061
FauI CCCGC 3 cut(s) 436, 552, 782
FauNDI CATATG 1 cut(s) 677
FbaI TGATCA 4 cut(s) 205, 628, 1138, 1633
FblI GTMKAC 2 cut(s) 1855, 1932
Fnu4HI GCNGC 4 cut(s) 221, 436, 952, 1443
Fsp4HI GCNGC 4 cut(s) 221, 436, 952, 1443
FspBI CTAG 3 cut(s) 797, 1002, 1061
GlaI GCGC 3 cut(s) 1092, 1441, 1543
GluI GCNGC 4 cut(s) 221, 436, 952, 1443
HaeII RGCGCY 1 cut(s) 1545
HaeIII GGCC 2 cut(s) 1167, 1413
HapII CCGG 1 cut(s) 707
HgaI GACGC 2 cut(s) 771, 802
HhaI GCGC 3 cut(s) 1093, 1442, 1544
Hin1I GRCGYC 1 cut(s) 1542
Hin6I GCGC 3 cut(s) 1091, 1440, 1542
HinP1I GCGC 3 cut(s) 1091, 1440, 1542
HindIII AAGCTT 1 cut(s) 1907
HinfI GANTC 6 cut(s) 143, 170, 841, 1177, 1340, 1406
HpaII CCGG 1 cut(s) 707
HphI GGTGA 8 cut(s) 12, 533, 641, 664, 812, 887, 1670, 1688
Hpy166II GTNNAC 5 cut(s) 68, 1379, 1711, 1856, 1933
Hpy188I TCNGA 5 cut(s) 181, 574, 1228, 1400, 1915
Hpy188III TCNNGA 7 cut(s) 65, 203, 350, 521, 838, 1216, 1881
Hpy8I GTNNAC 5 cut(s) 68, 1379, 1711, 1856, 1933
Hpy99I CGWCG 1 cut(s) 918
HpyAV CCTTC 4 cut(s) 254, 403, 1058, 1905
HpyCH4III ACNGT 5 cut(s) 122, 278, 1233, 1241, 1592
HpyCH4IV ACGT 3 cut(s) 1305, 1319, 1830
HpyF10VI GCNNNNNNNGC 5 cut(s) 123, 432, 786, 948, 1308
HpyF3I CTNAG 1 cut(s) 510
HpySE526I ACGT 3 cut(s) 1305, 1319, 1830
Hsp92I GRCGYC 1 cut(s) 1542
HspAI GCGC 3 cut(s) 1091, 1440, 1542
KasI GGCGCC 1 cut(s) 1541
Ksp22I TGATCA 4 cut(s) 205, 628, 1138, 1633
KspI CCGCGG 1 cut(s) 454
Kzo9I GATC 6 cut(s) 205, 628, 892, 1138, 1218, 1633
Lsp1109I GCAGC 2 cut(s) 207, 1429
LweI GCATC 8 cut(s) 248, 382, 909, 1059, 1099, 1427, 1517, 1874
MaeI CTAG 3 cut(s) 797, 1002, 1061
MaeII ACGT 3 cut(s) 1305, 1319, 1830
MaeIII GTNAC 9 cut(s) 42, 101, 230, 800, 1420, 1568, 1658, 1676, 1874
MalI GATC 6 cut(s) 207, 630, 894, 1140, 1220, 1635
MboI GATC 6 cut(s) 205, 628, 892, 1138, 1218, 1633
MfeI CAATTG 1 cut(s) 1458
MflI RGATCY 1 cut(s) 1218
MhlI GDGCHC 2 cut(s) 1467, 1597
MlsI TGGCCA 1 cut(s) 1167
MluCI AATT 8 cut(s) 24, 383, 645, 667, 832, 1086, 1446, 1458
MluNI TGGCCA 1 cut(s) 1167
Mly113I GGCGCC 1 cut(s) 1542
MlyI GAGTC 1 cut(s) 179
MmeI TCCRAC 2 cut(s) 288, 1863
Mox20I TGGCCA 1 cut(s) 1167
MscI TGGCCA 1 cut(s) 1167
MseI TTAA 1 cut(s) 1905
MslI CAYNNNNRTG 2 cut(s) 654, 657
Msp20I TGGCCA 1 cut(s) 1167
MspA1I CMGCKG 1 cut(s) 453
MspCI CTTAAG 1 cut(s) 1904
MspI CCGG 1 cut(s) 707
MspR9I CCNGG 1 cut(s) 1800
MunI CAATTG 1 cut(s) 1458
MvaI CCWGG 1 cut(s) 1800
MvnI CGCG 1 cut(s) 453
MwoI GCNNNNNNNGC 5 cut(s) 123, 432, 786, 948, 1308
NarI GGCGCC 1 cut(s) 1542
NcoI CCATGG 2 cut(s) 496, 1168
NdeI CATATG 1 cut(s) 677
NdeII GATC 6 cut(s) 205, 628, 892, 1138, 1218, 1633
NlaIV GGNNCC 2 cut(s) 1543, 1750
NmuCI GTSAC 5 cut(s) 230, 800, 1568, 1658, 1676
NspI RCATGY 3 cut(s) 690, 1698, 1737
OliI CACNNNNGTG 1 cut(s) 654
PagI TCATGA 1 cut(s) 837
PcsI WCGNNNNNNNCGW 1 cut(s) 61
PfeI GAWTC 5 cut(s) 143, 841, 1177, 1340, 1406
PinAI ACCGGT 1 cut(s) 706
PkrI GCNGC 4 cut(s) 222, 437, 953, 1444
PleI GAGTC 1 cut(s) 178
PluTI GGCGCC 1 cut(s) 1545
PmaCI CACGTG 1 cut(s) 1306
PmlI CACGTG 1 cut(s) 1306
PpsI GAGTC 1 cut(s) 178
Ppu21I YACGTR 1 cut(s) 1306
PpuMI RGGWCCY 1 cut(s) 329
PshAI GACNNNNGTC 1 cut(s) 807
Psp5II RGGWCCY 1 cut(s) 329
Psp6I CCWGG 1 cut(s) 1798
PspCI CACGTG 1 cut(s) 1306
PspEI GGTNACC 1 cut(s) 800
PspGI CCWGG 1 cut(s) 1798
PspN4I GGNNCC 2 cut(s) 1543, 1750
PspPI GGNCC 2 cut(s) 329, 1412
PspPPI RGGWCCY 1 cut(s) 329
PsrI GAACNNNNNNTAC 2 cut(s) 729, 761
PsuI RGATCY 1 cut(s) 1218
RsaI GTAC 1 cut(s) 1434
RsaNI GTAC 1 cut(s) 1433
RseI CAYNNNNRTG 2 cut(s) 654, 657
SacII CCGCGG 1 cut(s) 454
SaqAI TTAA 1 cut(s) 1905
SatI GCNGC 4 cut(s) 221, 436, 952, 1443
Sau3AI GATC 6 cut(s) 205, 628, 892, 1138, 1218, 1633
Sau96I GGNCC 2 cut(s) 329, 1412
SchI GAGTC 1 cut(s) 179
ScrFI CCNGG 1 cut(s) 1800
SduI GDGCHC 2 cut(s) 1467, 1597
SfaNI GCATC 8 cut(s) 248, 382, 909, 1059, 1099, 1427, 1517, 1874
SfcI CTRYAG 3 cut(s) 247, 1237, 1425
SfoI GGCGCC 1 cut(s) 1543
Sfr303I CCGCGG 1 cut(s) 454
SgrBI CCGCGG 1 cut(s) 454
SinI GGWCC 1 cut(s) 329
SmiMI CAYNNNNRTG 2 cut(s) 654, 657
SmlI CTYRAG 2 cut(s) 215, 1904
SmoI CTYRAG 2 cut(s) 215, 1904
Sse9I AATT 8 cut(s) 24, 383, 645, 667, 832, 1086, 1446, 1458
SspDI GGCGCC 1 cut(s) 1541
SspMI CTAG 3 cut(s) 797, 1002, 1061
StyD4I CCNGG 1 cut(s) 1798
StyI CCWWGG 3 cut(s) 496, 919, 1168
TaaI ACNGT 5 cut(s) 122, 278, 1233, 1241, 1592
TaiI ACGT 3 cut(s) 1308, 1322, 1833
TaqI TCGA 3 cut(s) 460, 858, 1882
TaqII GACCGA 1 cut(s) 819
TasI AATT 8 cut(s) 24, 383, 645, 667, 832, 1086, 1446, 1458
TauI GCSGC 2 cut(s) 438, 954
TfiI GAWTC 5 cut(s) 143, 841, 1177, 1340, 1406
Tru1I TTAA 1 cut(s) 1905
Tru9I TTAA 1 cut(s) 1905
TscAI CASTG 2 cut(s) 857, 1396
TseFI GTSAC 5 cut(s) 230, 800, 1568, 1658, 1676
TseI GCWGC 2 cut(s) 220, 1442
Tsp45I GTSAC 5 cut(s) 230, 800, 1568, 1658, 1676
TspDTI ATGAA 7 cut(s) 143, 707, 750, 826, 833, 1004, 1315
TspGWI ACGGA 3 cut(s) 126, 1306, 1482
TspRI CASTG 2 cut(s) 857, 1396
Vha464I CTTAAG 1 cut(s) 1904
VpaK11BI GGWCC 1 cut(s) 329
XapI RAATTY 2 cut(s) 383, 645
XceI RCATGY 3 cut(s) 690, 1698, 1737
XmiI GTMKAC 2 cut(s) 1855, 1932
XspI CTAG 3 cut(s) 797, 1002, 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.