AT3G07000

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000226
Physical Location & Seq
Forward (+)
2209405 .. 2211515
2111 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G07000.1

Sequence Viewer

Length: 1725 bp
ATGGAGCCGATCACGGACCAACCAATGGACCAACCAAAGCAAAAAGTGAAGATTCCCTGCAATCATATGTTACTCTACATACATTTGACGCAATCATATAGTTATTGTGCAGTATGCAATGGAGATTATGGCTTATGCTATTACTGCTCAAGATGCAACTTTCAAGCGCATTCAGAATGCATCGAGTGGCCAGACACCATCGACCACCCGAGTCATTCCAGACATCCTCTCAAGAAAGTCTCCCCCGGGACAATTGACTATACAGATGGCAAATGCCATTTTTGTAGAGAAGAACTTGTTGATCCCATGTATCATTGTTCTTTATGTAACTTCAGCATAGACGTGAATTGTTGGAGGCATCCGCCACAACGTACTATATATCAACCAAAGAGCCACGAGCATACATTCACCCTCATGCCGAGAAAGATCACATTCACTTGTAACGCATGCGGGATGCTTGGTGACTGCAATCCTTACTTTTGTTTTGAATGTGGTTTCATGCTGCACAAAGACTGCATCGATTTGCCCCGAGTGATCAACATCAACCGTCATGACCACCGCATTTCTCGCACTTATCATCTCGGCCACGGCGATTGGGGTTCATGTGGTGTTTGTCGTAAAGAAATAGATTGGAGTCTTGGAGCTTACTCTTGCAAGCGTTGTCCTAATTATGCTGTTCATTCAAAGTGTGCCATAAGGGAAGATGTGTGGAATGGAGAAGAACTAGAAGATGTGCCTGAAGAAGAAGAAGAAATCGAAGATCCATACAAGGTAGTAAATGATAAGGAAATCATTCATTTTTGTCATGAAGAACATAATCTAAGACTTGGTGGTGATGATGATGTTACCGGTTATGAAAAGATGCTGTGCGACGCTTGCATCACTCCCATCAGTTCTGATCCATTCTTCAAATGTGTGCAATGCGAGTTCTTCCTTCATAAAGTATGTGCTAGTCTTCCACGGAGGAAACGAAATATCATGCACACCGAGAAGCTTGATCTACAAGTTACGAAGGCTGGCGAGTATAATAAGTGTATATCTTGTAGAAAAATATTTGATGGCTTCCGGTACTGTTCAAGGTTTGAAAAGTTTGATGTGCGGTGCGGCTCCATTTCCGAGCCTTTTCACCATGAACTGCATCCCCATCCCTTATACCACATTTTGTCAGCAGCCGAAAAACTTAAGCTTTGTGGAGCCTGTGGTAAATATTTACACTATGTCTTAAGTTGTACTGTTTGTGAGTTTAATTTAGGCATGGATTGTGCCACTTTACCAAGAAAAGTGAGACACATATGCGACGCTCATGATTTATCGCTGCATCATGTCCCTGGGAATTCAAAAGGTCAACAACTATGGTGTGATAGTTGTGAGGGAAAGCTAGATCCGAGCGTATGGTTTTATGGATGTGATGATTGTGGGTCAACTCTACATATCAAATGTGTACTTGGAGACTTTAATCACTTAAAGCCAGGGAAAAAATACGGGGAAGCTGAACTAGTCGTCAACGATGGTATGACTAGACCTTTTTGCATATCGTGTAAAAAACGTTGCAGCTTCCCTTCCTTCCTTAAGGCTACTTGTCCAAATACTTTGTGTGAACAACGTTGGGGGTTCCCTTCCTTCCTTAAGGCTGCTTCTCCAGATTCATTTGTTCTGTTCGCTTGTTCAATGGACTGTGCATACGATAAATACTTCATGTTGTGGTTTTATGAAGTTGATTATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2

Protein Analysis

574

Amino Acids

66.27

Weight (kDa)

6.32

Isoelectric Point (pI)

51.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 70 - 117 3.8e-08 C1 domain
C1_2 PF03107 130 - 173 8.1e-11 C1 domain
C1_2 PF03107 182 - 231 2.3e-09 C1 domain
C1_2 PF03107 267 - 317 2.3e-10 C1 domain
C1_2 PF03107 432 - 481 2e-08 C1 domain
C1-like_CT PF22926 498 - 526 1.5e-08 C1 domain-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 25
AciI CCGC 5 cut(s) 362, 450, 559, 1099, 1104
AclI AACGTT 2 cut(s) 1546, 1603
AclWI GGATC 4 cut(s) 296, 755, 893, 1376
AcoI YGGCCR 2 cut(s) 188, 583
AcsI RAATTY 1 cut(s) 1333
AcuI CTGAAG 2 cut(s) 316, 759
AfaI GTAC 4 cut(s) 373, 1070, 1231, 1443
AfiI CCNNNNNNNGG 1 cut(s) 25
AflII CTTAAG 4 cut(s) 1181, 1222, 1568, 1625
AgeI ACCGGT 1 cut(s) 848
AgsI TTSAA 8 cut(s) 164, 488, 684, 910, 1077, 1085, 1338, 1668
AhlI ACTAGT 1 cut(s) 1495
AjiI CACGTC 1 cut(s) 343
AjnI CCWGG 2 cut(s) 1327, 1468
AluBI AGCT 6 cut(s) 644, 994, 1186, 1378, 1490, 1554
AluI AGCT 6 cut(s) 644, 994, 1186, 1378, 1490, 1554
Alw26I GTCTC 3 cut(s) 244, 1279, 1443
AlwI GGATC 4 cut(s) 296, 755, 893, 1376
Ama87I CYCGRG 3 cut(s) 208, 245, 528
AoxI GGCC 2 cut(s) 188, 583
ApeKI GCWGC 5 cut(s) 502, 1169, 1315, 1551, 1631
ApoI RAATTY 1 cut(s) 1333
AsiGI ACCGGT 1 cut(s) 848
Asp700I GAANNNNTTC 1 cut(s) 792
AspLEI GCGC 1 cut(s) 169
AspS9I GGNCC 2 cut(s) 16, 28
AsuC2I CCSGG 2 cut(s) 246, 247
AsuHPI GGTGA 4 cut(s) 400, 473, 845, 1118
AvaI CYCGRG 3 cut(s) 208, 245, 528
AvaII GGWCC 2 cut(s) 16, 28
BalI TGGCCA 1 cut(s) 190
BauI CACGAG 1 cut(s) 395
BbsI GAAGAC 1 cut(s) 947
BbvI GCAGC 5 cut(s) 489, 1181, 1302, 1563, 1618
BccI CCATC 6 cut(s) 206, 260, 896, 1052, 1152, 1502
BceAI ACGGC 1 cut(s) 604
BciT130I CCWGG 2 cut(s) 1329, 1470
BclI TGATCA 1 cut(s) 534
BcnI CCSGG 2 cut(s) 246, 247
BcoDI GTCTC 3 cut(s) 244, 1279, 1443
BcuI ACTAGT 1 cut(s) 1495
BfaI CTAG 5 cut(s) 725, 951, 1379, 1496, 1518
BfrI CTTAAG 4 cut(s) 1181, 1222, 1568, 1625
BisI GCNGC 6 cut(s) 503, 1105, 1170, 1316, 1552, 1632
BlsI GCNGC 6 cut(s) 504, 1106, 1171, 1317, 1553, 1633
Bme1390I CCNGG 4 cut(s) 246, 247, 1329, 1470
Bme18I GGWCC 2 cut(s) 16, 28
BmeT110I CYCGRG 3 cut(s) 208, 245, 528
BmgBI CACGTC 1 cut(s) 343
BmgT120I GGNCC 2 cut(s) 16, 28
BmiI GGNNCC 4 cut(s) 6, 1108, 1195, 1613
BmrFI CCNGG 4 cut(s) 246, 247, 1329, 1470
BmsI GCATC 9 cut(s) 143, 189, 367, 444, 525, 852, 888, 1147, 1327
BpiI GAAGAC 1 cut(s) 947
BpmI CTGGAG 1 cut(s) 1623
BpuEI CTTGAG 2 cut(s) 133, 215
BpuMI CCSGG 2 cut(s) 246, 247
Bsa29I ATCGAT 1 cut(s) 519
BsaBI GATNNNNATC 1 cut(s) 539
BsaJI CCNNGG 7 cut(s) 244, 245, 586, 959, 1327, 1328, 1469
BsaWI WCCGGW 2 cut(s) 848, 1065
Bsc4I CCNNNNNNNGG 1 cut(s) 25
Bse118I RCCGGY 1 cut(s) 848
Bse3DI GCAATG 2 cut(s) 124, 926
Bse8I GATNNNNATC 1 cut(s) 539
BseBI CCWGG 2 cut(s) 1329, 1470
BseCI ATCGAT 1 cut(s) 519
BseDI CCNNGG 7 cut(s) 244, 245, 586, 959, 1327, 1328, 1469
BseGI GGATG 6 cut(s) 223, 358, 459, 1138, 1144, 1409
BseJI GATNNNNATC 1 cut(s) 539
BseLI CCNNNNNNNGG 1 cut(s) 25
BseMI GCAATG 2 cut(s) 124, 926
BseXI GCAGC 5 cut(s) 489, 1181, 1302, 1563, 1618
BsgI GTGCAG 2 cut(s) 129, 488
BshFI GGCC 2 cut(s) 190, 585
BshTI ACCGGT 1 cut(s) 848
BshVI ATCGAT 1 cut(s) 519
BsiHKCI CYCGRG 3 cut(s) 208, 245, 528
BsiSI CCGG 3 cut(s) 246, 849, 1066
BslFI GGGAC 2 cut(s) 262, 1310
BslI CCNNNNNNNGG 1 cut(s) 25
BsmAI GTCTC 3 cut(s) 244, 1279, 1443
BsmFI GGGAC 2 cut(s) 262, 1310
BsmI GAATGC 2 cut(s) 169, 182
BsnI GGCC 2 cut(s) 190, 585
BsoBI CYCGRG 3 cut(s) 208, 245, 528
Bsp143I GATC 8 cut(s) 9, 301, 426, 534, 760, 898, 997, 1381
BspACI CCGC 5 cut(s) 362, 450, 559, 1099, 1104
BspANI GGCC 2 cut(s) 190, 585
BspDI ATCGAT 1 cut(s) 519
BspHI TCATGA 3 cut(s) 550, 805, 1303
BspLI GGNNCC 4 cut(s) 6, 1108, 1195, 1613
BspPI GGATC 4 cut(s) 296, 755, 893, 1376
BspTI CTTAAG 4 cut(s) 1181, 1222, 1568, 1625
BsrDI GCAATG 2 cut(s) 124, 926
BsrFI RCCGGY 1 cut(s) 848
BssAI RCCGGY 1 cut(s) 848
BssECI CCNNGG 7 cut(s) 244, 245, 586, 959, 1327, 1328, 1469
BssMI GATC 8 cut(s) 9, 301, 426, 534, 760, 898, 997, 1381
BssSI CACGAG 1 cut(s) 395
Bst2BI CACGAG 1 cut(s) 395
Bst2UI CCWGG 2 cut(s) 1329, 1470
Bst4CI ACNGT 4 cut(s) 548, 1073, 1234, 1676
BstAFI CTTAAG 4 cut(s) 1181, 1222, 1568, 1625
BstC8I GCNNGC 4 cut(s) 448, 656, 877, 1018
BstDEI CTNAG 1 cut(s) 821
BstDSI CCRYGG 2 cut(s) 586, 959
BstF5I GGATG 6 cut(s) 223, 358, 459, 1138, 1144, 1409
BstHHI GCGC 1 cut(s) 169
BstKTI GATC 8 cut(s) 12, 304, 429, 537, 763, 901, 1000, 1384
BstMAI GTCTC 3 cut(s) 244, 1279, 1443
BstMBI GATC 8 cut(s) 9, 301, 426, 534, 760, 898, 997, 1381
BstMWI GCNNNNNNNGC 4 cut(s) 144, 153, 567, 876
BstNI CCWGG 2 cut(s) 1329, 1470
BstNSI RCATGY 1 cut(s) 450
BstSCI CCNGG 4 cut(s) 244, 245, 1327, 1468
BstV1I GCAGC 5 cut(s) 489, 1181, 1302, 1563, 1618
BstV2I GAAGAC 1 cut(s) 947
BstX2I RGATCY 2 cut(s) 760, 1381
BstYI RGATCY 2 cut(s) 760, 1381
Bsu15I ATCGAT 1 cut(s) 519
BsuRI GGCC 2 cut(s) 190, 585
BsuTUI ATCGAT 1 cut(s) 519
BtgI CCRYGG 2 cut(s) 586, 959
BtrI CACGTC 1 cut(s) 343
BtsCI GGATG 6 cut(s) 223, 358, 459, 1138, 1144, 1409
Cac8I GCNNGC 4 cut(s) 448, 656, 877, 1018
CciI TCATGA 3 cut(s) 550, 805, 1303
CfoI GCGC 1 cut(s) 169
Cfr10I RCCGGY 1 cut(s) 848
Cfr13I GGNCC 2 cut(s) 16, 28
Cfr9I CCCGGG 1 cut(s) 245
ClaI ATCGAT 1 cut(s) 519
CseI GACGC 3 cut(s) 97, 881, 1307
Csp6I GTAC 4 cut(s) 372, 1069, 1230, 1442
CspAI ACCGGT 1 cut(s) 848
CspCI CAANNNNNGTGG 2 cut(s) 575, 610
CviQI GTAC 4 cut(s) 372, 1069, 1230, 1442
DdeI CTNAG 1 cut(s) 821
DpnI GATC 8 cut(s) 11, 303, 428, 536, 762, 900, 999, 1383
DpnII GATC 8 cut(s) 9, 301, 426, 534, 760, 898, 997, 1381
EaeI YGGCCR 2 cut(s) 188, 583
EciI GGCGGA 1 cut(s) 351
Eco47I GGWCC 2 cut(s) 16, 28
Eco57I CTGAAG 2 cut(s) 316, 759
Eco88I CYCGRG 3 cut(s) 208, 245, 528
EcoRI GAATTC 1 cut(s) 1333
EcoRII CCWGG 2 cut(s) 1327, 1468
EcoT22I ATGCAT 1 cut(s) 182
FaqI GGGAC 2 cut(s) 262, 1310
FauI CCCGC 1 cut(s) 443
FauNDI CATATG 2 cut(s) 66, 1292
FbaI TGATCA 1 cut(s) 534
Fnu4HI GCNGC 6 cut(s) 503, 1105, 1170, 1316, 1552, 1632
FokI GGATG 6 cut(s) 210, 345, 466, 1125, 1131, 1416
Fsp4HI GCNGC 6 cut(s) 503, 1105, 1170, 1316, 1552, 1632
FspBI CTAG 5 cut(s) 725, 951, 1379, 1496, 1518
GlaI GCGC 1 cut(s) 168
GluI GCNGC 6 cut(s) 503, 1105, 1170, 1316, 1552, 1632
GsuI CTGGAG 1 cut(s) 1623
HaeIII GGCC 2 cut(s) 190, 585
HapII CCGG 3 cut(s) 246, 849, 1066
HgaI GACGC 3 cut(s) 97, 881, 1307
HhaI GCGC 1 cut(s) 169
Hin6I GCGC 1 cut(s) 167
HinP1I GCGC 1 cut(s) 167
HincII GTYRAC 3 cut(s) 1346, 1422, 1504
HindII GTYRAC 3 cut(s) 1346, 1422, 1504
HindIII AAGCTT 2 cut(s) 992, 1184
HinfI GANTC 4 cut(s) 52, 211, 634, 1643
HpaII CCGG 3 cut(s) 246, 849, 1066
HphI GGTGA 4 cut(s) 400, 473, 845, 1118
Hpy166II GTNNAC 5 cut(s) 1346, 1422, 1442, 1504, 1598
Hpy188I TCNGA 4 cut(s) 175, 898, 1117, 1386
Hpy188III TCNNGA 7 cut(s) 150, 219, 232, 551, 806, 1304, 1640
Hpy8I GTNNAC 5 cut(s) 1346, 1422, 1442, 1504, 1598
Hpy99I CGWCG 2 cut(s) 875, 1301
HpyAV CCTTC 6 cut(s) 944, 1006, 1569, 1573, 1626, 1630
HpyCH4III ACNGT 4 cut(s) 548, 1073, 1234, 1676
HpyCH4IV ACGT 4 cut(s) 342, 370, 1546, 1603
HpyF10VI GCNNNNNNNGC 4 cut(s) 144, 153, 567, 876
HpyF3I CTNAG 1 cut(s) 821
HpySE526I ACGT 4 cut(s) 342, 370, 1546, 1603
HspAI GCGC 1 cut(s) 167
Ksp22I TGATCA 1 cut(s) 534
Kzo9I GATC 8 cut(s) 9, 301, 426, 534, 760, 898, 997, 1381
LmnI GCTCC 4 cut(s) 4, 641, 1112, 1193
Lsp1109I GCAGC 5 cut(s) 489, 1181, 1302, 1563, 1618
LweI GCATC 9 cut(s) 143, 189, 367, 444, 525, 852, 888, 1147, 1327
MaeI CTAG 5 cut(s) 725, 951, 1379, 1496, 1518
MaeII ACGT 4 cut(s) 342, 370, 1546, 1603
MaeIII GTNAC 6 cut(s) 69, 326, 440, 461, 844, 1006
MalI GATC 8 cut(s) 11, 303, 428, 536, 762, 900, 999, 1383
MboI GATC 8 cut(s) 9, 301, 426, 534, 760, 898, 997, 1381
MfeI CAATTG 1 cut(s) 252
MflI RGATCY 2 cut(s) 760, 1381
MlsI TGGCCA 1 cut(s) 190
MluCI AATT 5 cut(s) 252, 346, 667, 1246, 1333
MluNI TGGCCA 1 cut(s) 190
MlyI GAGTC 2 cut(s) 220, 643
MmeI TCCRAC 1 cut(s) 332
MnlI CCTC 5 cut(s) 237, 348, 422, 957, 1363
Mox20I TGGCCA 1 cut(s) 190
Mph1103I ATGCAT 1 cut(s) 182
MroXI GAANNNNTTC 1 cut(s) 792
MscI TGGCCA 1 cut(s) 190
MseI TTAA 8 cut(s) 1182, 1223, 1245, 1455, 1463, 1569, 1626, 1723
MslI CAYNNNNRTG 2 cut(s) 341, 413
Msp20I TGGCCA 1 cut(s) 190
MspCI CTTAAG 4 cut(s) 1181, 1222, 1568, 1625
MspI CCGG 3 cut(s) 246, 849, 1066
MspR9I CCNGG 4 cut(s) 246, 247, 1329, 1470
MunI CAATTG 1 cut(s) 252
Mva1269I GAATGC 2 cut(s) 169, 182
MvaI CCWGG 2 cut(s) 1329, 1470
MwoI GCNNNNNNNGC 4 cut(s) 144, 153, 567, 876
NciI CCSGG 2 cut(s) 246, 247
NdeI CATATG 2 cut(s) 66, 1292
NdeII GATC 8 cut(s) 9, 301, 426, 534, 760, 898, 997, 1381
NlaIV GGNNCC 4 cut(s) 6, 1108, 1195, 1613
NmeAIII GCCGAG 2 cut(s) 444, 561
NmuCI GTSAC 1 cut(s) 461
NsiI ATGCAT 1 cut(s) 182
NspI RCATGY 1 cut(s) 450
PaeI GCATGC 1 cut(s) 450
PagI TCATGA 3 cut(s) 550, 805, 1303
PasI CCCWGGG 1 cut(s) 1328
PcsI WCGNNNNNNNCGW 2 cut(s) 588, 967
PctI GAATGC 2 cut(s) 169, 182
PdmI GAANNNNTTC 1 cut(s) 792
PfeI GAWTC 2 cut(s) 52, 1643
PflMI CCANNNNNTGG 1 cut(s) 25
PinAI ACCGGT 1 cut(s) 848
PkrI GCNGC 6 cut(s) 504, 1106, 1171, 1317, 1553, 1633
PleI GAGTC 2 cut(s) 219, 642
PpsI GAGTC 2 cut(s) 219, 642
Psp1406I AACGTT 2 cut(s) 1546, 1603
Psp6I CCWGG 2 cut(s) 1327, 1468
PspGI CCWGG 2 cut(s) 1327, 1468
PspN4I GGNNCC 4 cut(s) 6, 1108, 1195, 1613
PspPI GGNCC 2 cut(s) 16, 28
PsuI RGATCY 2 cut(s) 760, 1381
RsaI GTAC 4 cut(s) 373, 1070, 1231, 1443
RsaNI GTAC 4 cut(s) 372, 1069, 1230, 1442
RseI CAYNNNNRTG 2 cut(s) 341, 413
SaqAI TTAA 8 cut(s) 1182, 1223, 1245, 1455, 1463, 1569, 1626, 1723
SatI GCNGC 6 cut(s) 503, 1105, 1170, 1316, 1552, 1632
Sau3AI GATC 8 cut(s) 9, 301, 426, 534, 760, 898, 997, 1381
Sau96I GGNCC 2 cut(s) 16, 28
SchI GAGTC 2 cut(s) 220, 643
ScrFI CCNGG 4 cut(s) 246, 247, 1329, 1470
SfaNI GCATC 9 cut(s) 143, 189, 367, 444, 525, 852, 888, 1147, 1327
SinI GGWCC 2 cut(s) 16, 28
SmaI CCCGGG 1 cut(s) 247
SmiMI CAYNNNNRTG 2 cut(s) 341, 413
SmlI CTYRAG 6 cut(s) 148, 230, 1181, 1222, 1568, 1625
SmoI CTYRAG 6 cut(s) 148, 230, 1181, 1222, 1568, 1625
SpeI ACTAGT 1 cut(s) 1495
SphI GCATGC 1 cut(s) 450
Sse9I AATT 5 cut(s) 252, 346, 667, 1246, 1333
SsiI CCGC 5 cut(s) 362, 450, 559, 1099, 1104
SspI AATATT 2 cut(s) 1053, 1208
SspMI CTAG 5 cut(s) 725, 951, 1379, 1496, 1518
StyD4I CCNGG 4 cut(s) 244, 245, 1327, 1468
TaaI ACNGT 4 cut(s) 548, 1073, 1234, 1676
TaiI ACGT 4 cut(s) 345, 373, 1549, 1606
TaqI TCGA 4 cut(s) 183, 201, 519, 756
TasI AATT 5 cut(s) 252, 346, 667, 1246, 1333
TatI WGTACW 2 cut(s) 1229, 1441
TauI GCSGC 1 cut(s) 1107
TfiI GAWTC 2 cut(s) 52, 1643
Tru1I TTAA 8 cut(s) 1182, 1223, 1245, 1455, 1463, 1569, 1626, 1723
Tru9I TTAA 8 cut(s) 1182, 1223, 1245, 1455, 1463, 1569, 1626, 1723
TseFI GTSAC 1 cut(s) 461
TseI GCWGC 5 cut(s) 502, 1169, 1315, 1551, 1631
Tsp45I GTSAC 1 cut(s) 461
TspGWI ACGGA 2 cut(s) 29, 976
TspMI CCCGGG 1 cut(s) 245
Van91I CCANNNNNTGG 1 cut(s) 25
Vha464I CTTAAG 4 cut(s) 1181, 1222, 1568, 1625
VpaK11BI GGWCC 2 cut(s) 16, 28
XapI RAATTY 1 cut(s) 1333
XceI RCATGY 1 cut(s) 450
XmaI CCCGGG 1 cut(s) 245
XmnI GAANNNNTTC 1 cut(s) 792
XspI CTAG 5 cut(s) 725, 951, 1379, 1496, 1518
Zsp2I ATGCAT 1 cut(s) 182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.