AT4G01740

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
753422 .. 755456
2035 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G01740.1

Sequence Viewer

Length: 1959 bp
ATGGATTCCGAAGGAGTGTTAATGCCGTTGATCCACAAGCATCGTATGATGCCTTGGAATGATCTGAGAAGAGGTGATTGCTGTGGCCGTTTTGAATCTATTTGTGATGGTTATTACTGCAAAATCTGTGATATTTTCGTCCACAAGAAATGTGGCGAGTCCTCCGAATATATCGAGCATCCATCTCACCCCAATCACACTCTTCAGCTTCTAAGTACTAGAGGAAATAGCCATGACTGTGATTTATGTGGAAAGAACATCGGGGATCTATTCTATCGTTGTGAGATCTGTGACTTCGACATGGATCTATACTGTGCCAAGTATCCACCACCAGAGGTTATTAACATTTCCAAGACGCATCACCACAAGCTCAACCTTCTCAAGGAGCTGATCCAGTTTGACTATTGCGTATGGCATCCGCCAGAGGTAAATCACACTTTAGAGGTAAACCACTCTTACCACTCCTTGCACCCTCTTAAGCTTCACACTGGTCAACTACCGAATTATTCTGACCGAAAATGTCGTCTATGCGCAAAAGAAATTGAAGTTGGATTGTTTTATCATTGTTCTTTGTGTAATTTCACCTTGGATATGTCTTGTGTTTTAAATCCACCACAACGATATCTTTGGAATTTGAAAGCTCATGACCACCAACTCACCCTGCTCCCAAGTCTCCGTTCTTTTTTATGTAGTGCTTGCGGTTTGAATGGCGACCGAAGCCCTTACATATGTGTTCAATGTGACTTTATGATCCATCAAGTCTGTCTTCATCTTCCTCGTGTCATAAACATTAATCGGCATGATCACCGCGTCTCTCGAACTTCTGTTCTTGGTGTTGTTAATTCGGTATGTGGAGTTTGTCGCCAGAAGGTGGATTGGACTTGTGGAGGTTTTTCTTGTCCGAGGTGTCCTGGCTATGCCGCTCATTCCCTATGTGCTACTAGAGAAGATGTGTGGAACGGAAAAGAACTCGAAGGAGTACCCGAAGAAATAGAAGATATAGAGCCATATGTGGTAATAGATGACAATACAATACAACATTTCAGCCACAAAGAGCATTACCTAAGACTCCACGTTAATAGTGTTCTTTGTGATGACAACAAGCGGTGCAGCGCATGCACCCATCCAATCTGTCTCCAATCTTTCTACGGTTGTATGGATTGTGACTTCATTCTCCACCAAAACTGCGCTGGATTTCTTAGAATGAAATGGCATGTGCTACACAATGAACGTCTTACTCTAGTTACTAATGAGACTGAAGTCTTTAAGTGTTATGCTTGTGAGAGATGGTCCAATGGTTTCAGGTACCAGCAAGGGTATAAATCATTCGATGTTCGGTGCGGTTCAATTTCTGAGCCATTTTTCCATCCAAGTCATCCCGATCATCCCTTATATTGCATTTTACCTTACGGAAAAATATTCTGCAATGGTTGTTACAAGTTCAAATATGGAATGCTCGTGTGCGTTGAATATGAATGTAATCATTTAATATGCTTCAATTGCGCTACTCTACCACCAGTGGTAAAGCATAGAGTTGACGATCATCCTCTCTCACTATGCTATGGTGAAAAGGCTAGTGGTATATGTTGGTGTGACATTTGTGAAGCCAAAGCCGATCCAGAGATATGGTTCTACACGTGTAAAGACCAACGTGCTAGTTTACATACAAGTTGTGTGCTTGGAGACTTTTCAGGGCTCATGCCGGGAAGCACACTCAAGAGTGCGAGCAATTCATCTGAGGTGCTGCTCAACAATATTGTATCTCGTCCATTTTGCAGCTTTTTAGAGCTCATGCCGGGAAGCACGCTAGAGAGTGCGGGCAAATCAGTTGAGGTGGGGCTCAATAAAAGTACATCTCGTCCATTTTGCATCTCGTGTAAGTTGCATTGCATTTTTCCTATCATCTTGAAAAGACTTGGAACCTCAGATGAATACTTTTGCTCTATTCTATGCATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

652

Amino Acids

74.61

Weight (kDa)

6.52

Isoelectric Point (pI)

50.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 61 - 106 4.1e-11 C1 domain
C1_2 PF03107 153 - 201 5e-11 C1 domain
C1_2 PF03107 214 - 255 2.2e-12 C1 domain
C1_2 PF03107 265 - 313 1.1e-06 C1 domain
C1_2 PF03107 348 - 397 3.5e-10 C1 domain
C1_2 PF03107 512 - 559 7.5e-10 C1 domain
C1-like_CT PF22926 610 - 652 9.4e-16 C1 domain-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 532
Acc65I GGTACC 1 cut(s) 1305
AccB1I GGYRCC 1 cut(s) 1305
AccB7I CCANNNNNTGG 1 cut(s) 871
AccBSI CCGCTC 1 cut(s) 923
AccII CGCG 1 cut(s) 810
AciI CCGC 7 cut(s) 419, 699, 808, 921, 1105, 1341, 1817
AclWI GGATC 6 cut(s) 25, 273, 312, 385, 745, 1610
AcoI YGGCCR 1 cut(s) 85
AcsI RAATTY 1 cut(s) 631
AcuI CTGAAG 2 cut(s) 188, 1278
AcvI CACGTG 1 cut(s) 1638
AfaI GTAC 4 cut(s) 217, 981, 1307, 1852
AfiI CCNNNNNNNGG 2 cut(s) 382, 871
AflII CTTAAG 1 cut(s) 476
AflIII ACRYGT 2 cut(s) 1635, 1637
AjnI CCWGG 1 cut(s) 910
AjuI GAANNNNNNNTTGG 4 cut(s) 531, 563, 661, 693
AluBI AGCT 7 cut(s) 208, 370, 388, 481, 641, 1779, 1789
AluI AGCT 7 cut(s) 208, 370, 388, 481, 641, 1779, 1789
Alw21I GWGCWC 1 cut(s) 1791
Alw26I GTCTC 5 cut(s) 677, 817, 1139, 1247, 1677
AlwI GGATC 6 cut(s) 25, 273, 312, 385, 745, 1610
AoxI GGCC 1 cut(s) 85
ApeKI GCWGC 3 cut(s) 1110, 1744, 1776
ApoI RAATTY 1 cut(s) 631
ArsI GACNNNNNNTTYG 2 cut(s) 508, 540
AseI ATTAAT 1 cut(s) 792
Asp718I GGTACC 1 cut(s) 1305
AspLEI GCGC 4 cut(s) 533, 1115, 1190, 1505
AspS9I GGNCC 1 cut(s) 1290
AsuC2I CCSGG 2 cut(s) 1704, 1797
AsuHPI GGTGA 7 cut(s) 86, 179, 353, 574, 649, 797, 1577
AvaII GGWCC 1 cut(s) 1290
BanI GGYRCC 1 cut(s) 1305
BanII GRGCYC 3 cut(s) 1698, 1791, 1842
BauI CACGAG 3 cut(s) 777, 1457, 1873
BbrPI CACGTG 1 cut(s) 1638
BbsI GAAGAC 1 cut(s) 758
Bbv12I GWGCWC 1 cut(s) 1791
BbvI GCAGC 3 cut(s) 1122, 1731, 1788
BccI CCATC 6 cut(s) 101, 190, 762, 1131, 1281, 1374
BceAI ACGGC 2 cut(s) 10, 72
BciT130I CCWGG 1 cut(s) 912
BciVI GTATCC 1 cut(s) 333
BclI TGATCA 1 cut(s) 802
BcnI CCSGG 2 cut(s) 1704, 1797
BcoDI GTCTC 5 cut(s) 677, 817, 1139, 1247, 1677
BfaI CTAG 6 cut(s) 219, 942, 1241, 1575, 1656, 1808
BfrI CTTAAG 1 cut(s) 476
BfuI GTATCC 1 cut(s) 333
BglII AGATCT 1 cut(s) 285
BisI GCNGC 4 cut(s) 921, 1111, 1745, 1777
BlsI GCNGC 4 cut(s) 922, 1112, 1746, 1778
BmcAI AGTACT 1 cut(s) 217
Bme1390I CCNGG 3 cut(s) 912, 1704, 1797
Bme18I GGWCC 1 cut(s) 1290
BmgT120I GGNCC 1 cut(s) 1290
BmiI GGNNCC 2 cut(s) 1307, 1921
BmrFI CCNGG 3 cut(s) 912, 1704, 1797
BmsI GCATC 6 cut(s) 39, 49, 187, 367, 424, 1878
BoxI GACNNNNGTC 1 cut(s) 1259
BpiI GAAGAC 1 cut(s) 758
BpuEI CTTGAG 2 cut(s) 365, 1700
BpuMI CCSGG 2 cut(s) 1704, 1797
BsaAI YACGTR 1 cut(s) 1638
BsaJI CCNNGG 3 cut(s) 53, 585, 902
Bsc4I CCNNNNNNNGG 2 cut(s) 382, 871
Bse1I ACTGG 3 cut(s) 394, 493, 1517
Bse3DI GCAATG 2 cut(s) 1432, 1885
BseBI CCWGG 1 cut(s) 912
BseDI CCNNGG 3 cut(s) 53, 585, 902
BseGI GGATG 7 cut(s) 178, 415, 1123, 1366, 1375, 1384, 1543
BseLI CCNNNNNNNGG 2 cut(s) 382, 871
BseMI GCAATG 2 cut(s) 1432, 1885
BseMII CTCAG 4 cut(s) 56, 1344, 1728, 1938
BseNI ACTGG 3 cut(s) 394, 493, 1517
BseXI GCAGC 3 cut(s) 1122, 1731, 1788
BsgI GTGCAG 1 cut(s) 1129
Bsh1236I CGCG 1 cut(s) 810
Bsh1285I CGRYCG 1 cut(s) 715
BshFI GGCC 1 cut(s) 87
BshNI GGYRCC 1 cut(s) 1305
BsiEI CGRYCG 1 cut(s) 715
BsiHKAI GWGCWC 1 cut(s) 1791
BsiSI CCGG 2 cut(s) 1703, 1796
BslI CCNNNNNNNGG 2 cut(s) 382, 871
BsmAI GTCTC 5 cut(s) 677, 817, 1139, 1247, 1677
BsmBI CGTCTC 1 cut(s) 817
BsmI GAATGC 1 cut(s) 1458
BsnI GGCC 1 cut(s) 87
Bsp1286I GDGCHC 3 cut(s) 1698, 1791, 1842
BspACI CCGC 7 cut(s) 419, 699, 808, 921, 1105, 1341, 1817
BspANI GGCC 1 cut(s) 87
BspCNI CTCAG 4 cut(s) 57, 1345, 1729, 1937
BspFNI CGCG 1 cut(s) 810
BspHI TCATGA 1 cut(s) 643
BspLI GGNNCC 2 cut(s) 1307, 1921
BspPI GGATC 6 cut(s) 25, 273, 312, 385, 745, 1610
BspT107I GGYRCC 1 cut(s) 1305
BspTI CTTAAG 1 cut(s) 476
BsrBI CCGCTC 1 cut(s) 923
BsrDI GCAATG 2 cut(s) 1432, 1885
BsrI ACTGG 3 cut(s) 394, 493, 1517
BssECI CCNNGG 3 cut(s) 53, 585, 902
BssSI CACGAG 3 cut(s) 777, 1457, 1873
BssT1I CCWWGG 2 cut(s) 53, 585
Bst2BI CACGAG 3 cut(s) 777, 1457, 1873
Bst2UI CCWGG 1 cut(s) 912
Bst4CI ACNGT 3 cut(s) 239, 314, 1151
Bst6I CTCTTC 2 cut(s) 64, 207
BstAFI CTTAAG 1 cut(s) 476
BstAPI GCANNNNNTGC 1 cut(s) 1116
BstBAI YACGTR 1 cut(s) 1638
BstC8I GCNNGC 5 cut(s) 697, 1117, 1726, 1805, 1819
BstDEI CTNAG 7 cut(s) 65, 212, 1064, 1199, 1353, 1737, 1924
BstENI CCTNNNNNAGG 1 cut(s) 380
BstF5I GGATG 7 cut(s) 178, 415, 1123, 1366, 1375, 1384, 1543
BstFNI CGCG 1 cut(s) 810
BstHHI GCGC 4 cut(s) 533, 1115, 1190, 1505
BstMAI GTCTC 5 cut(s) 677, 817, 1139, 1247, 1677
BstMCI CGRYCG 1 cut(s) 715
BstMWI GCNNNNNNNGC 3 cut(s) 717, 1116, 1500
BstNI CCWGG 1 cut(s) 912
BstNSI RCATGY 2 cut(s) 1119, 1217
BstPAI GACNNNNGTC 1 cut(s) 1259
BstSCI CCNGG 3 cut(s) 910, 1702, 1795
BstUI CGCG 1 cut(s) 810
BstV1I GCAGC 3 cut(s) 1122, 1731, 1788
BstV2I GAAGAC 1 cut(s) 758
BstX2I RGATCY 3 cut(s) 265, 285, 304
BstXI CCANNNNNNTGG 1 cut(s) 1626
BstYI RGATCY 3 cut(s) 265, 285, 304
BsuI GTATCC 1 cut(s) 333
BsuRI GGCC 1 cut(s) 87
BtsCI GGATG 7 cut(s) 178, 415, 1123, 1366, 1375, 1384, 1543
BtsIMutI CAGTG 2 cut(s) 486, 1524
Cac8I GCNNGC 5 cut(s) 697, 1117, 1726, 1805, 1819
CciI TCATGA 1 cut(s) 643
CfoI GCGC 4 cut(s) 533, 1115, 1190, 1505
Cfr13I GGNCC 1 cut(s) 1290
CseI GACGC 2 cut(s) 364, 799
Csp6I GTAC 4 cut(s) 216, 980, 1306, 1851
CspCI CAANNNNNGTGG 2 cut(s) 133, 168
CviAII CATG 8 cut(s) 233, 301, 644, 800, 1116, 1214, 1699, 1792
CviQI GTAC 4 cut(s) 216, 980, 1306, 1851
DdeI CTNAG 7 cut(s) 65, 212, 1064, 1199, 1353, 1737, 1924
DraI TTTAAA 1 cut(s) 606
EaeI YGGCCR 1 cut(s) 85
Eam1104I CTCTTC 2 cut(s) 64, 207
EarI CTCTTC 2 cut(s) 64, 207
EciI GGCGGA 1 cut(s) 408
Ecl136II GAGCTC 1 cut(s) 1789
Eco130I CCWWGG 2 cut(s) 53, 585
Eco24I GRGCYC 3 cut(s) 1698, 1791, 1842
Eco32I GATATC 1 cut(s) 623
Eco47I GGWCC 1 cut(s) 1290
Eco53kI GAGCTC 1 cut(s) 1789
Eco57I CTGAAG 2 cut(s) 188, 1278
Eco72I CACGTG 1 cut(s) 1638
EcoICRI GAGCTC 1 cut(s) 1789
EcoNI CCTNNNNNAGG 1 cut(s) 380
EcoRII CCWGG 1 cut(s) 910
EcoRV GATATC 1 cut(s) 623
EcoT14I CCWWGG 2 cut(s) 53, 585
EcoT22I ATGCAT 1 cut(s) 1955
EcoT38I GRGCYC 3 cut(s) 1698, 1791, 1842
ErhI CCWWGG 2 cut(s) 53, 585
Esp3I CGTCTC 1 cut(s) 817
FaeI CATG 8 cut(s) 236, 304, 647, 803, 1119, 1217, 1702, 1795
FalI AAGNNNNNCTT 2 cut(s) 750, 782
FatI CATG 8 cut(s) 232, 300, 643, 799, 1115, 1213, 1698, 1791
FauI CCCGC 1 cut(s) 1810
FauNDI CATATG 2 cut(s) 728, 1009
FbaI TGATCA 1 cut(s) 802
Fnu4HI GCNGC 4 cut(s) 921, 1111, 1745, 1777
FokI GGATG 7 cut(s) 165, 402, 1110, 1353, 1362, 1371, 1530
FriOI GRGCYC 3 cut(s) 1698, 1791, 1842
Fsp4HI GCNGC 4 cut(s) 921, 1111, 1745, 1777
FspBI CTAG 6 cut(s) 219, 942, 1241, 1575, 1656, 1808
FspI TGCGCA 1 cut(s) 532
GlaI GCGC 4 cut(s) 532, 1114, 1189, 1504
GluI GCNGC 4 cut(s) 921, 1111, 1745, 1777
HaeIII GGCC 1 cut(s) 87
HapII CCGG 2 cut(s) 1703, 1796
HgaI GACGC 2 cut(s) 364, 799
HhaI GCGC 4 cut(s) 533, 1115, 1190, 1505
Hin1II CATG 8 cut(s) 236, 304, 647, 803, 1119, 1217, 1702, 1795
Hin6I GCGC 4 cut(s) 531, 1113, 1188, 1503
HinP1I GCGC 4 cut(s) 531, 1113, 1188, 1503
HincII GTYRAC 2 cut(s) 494, 1537
HindII GTYRAC 2 cut(s) 494, 1537
HindIII AAGCTT 1 cut(s) 479
HinfI GANTC 4 cut(s) 5, 95, 158, 1068
HpaII CCGG 2 cut(s) 1703, 1796
HphI GGTGA 7 cut(s) 86, 179, 353, 574, 649, 797, 1577
Hpy166II GTNNAC 5 cut(s) 142, 448, 494, 1537, 1661
Hpy188I TCNGA 9 cut(s) 10, 66, 166, 511, 903, 1354, 1738, 1927, 1958
Hpy188III TCNNGA 6 cut(s) 644, 816, 1379, 1619, 1717, 1906
Hpy8I GTNNAC 5 cut(s) 142, 448, 494, 1537, 1661
HpyAV CCTTC 4 cut(s) 5, 386, 862, 968
HpyCH4III ACNGT 3 cut(s) 239, 314, 1151
HpyCH4IV ACGT 4 cut(s) 1074, 1231, 1637, 1651
HpyF10VI GCNNNNNNNGC 3 cut(s) 717, 1116, 1500
HpyF3I CTNAG 7 cut(s) 65, 212, 1064, 1199, 1353, 1737, 1924
HpySE526I ACGT 4 cut(s) 1074, 1231, 1637, 1651
Hsp92II CATG 8 cut(s) 236, 304, 647, 803, 1119, 1217, 1702, 1795
HspAI GCGC 4 cut(s) 531, 1113, 1188, 1503
KpnI GGTACC 1 cut(s) 1309
Ksp22I TGATCA 1 cut(s) 802
LmnI GCTCC 2 cut(s) 385, 669
Lsp1109I GCAGC 3 cut(s) 1122, 1731, 1788
LweI GCATC 6 cut(s) 39, 49, 187, 367, 424, 1878
MaeI CTAG 6 cut(s) 219, 942, 1241, 1575, 1656, 1808
MaeII ACGT 4 cut(s) 1074, 1231, 1637, 1651
MaeIII GTNAC 6 cut(s) 290, 740, 1163, 1243, 1433, 1592
MbiI CCGCTC 1 cut(s) 923
MboII GAAGA 7 cut(s) 81, 194, 758, 764, 959, 998, 1007
MfeI CAATTG 1 cut(s) 1498
MflI RGATCY 3 cut(s) 265, 285, 304
MhlI GDGCHC 3 cut(s) 1698, 1791, 1842
MluCI AATT 8 cut(s) 502, 540, 577, 631, 841, 1347, 1498, 1729
MlyI GAGTC 2 cut(s) 167, 1062
MmeI TCCRAC 1 cut(s) 529
Mph1103I ATGCAT 1 cut(s) 1955
MseI TTAA 9 cut(s) 20, 342, 477, 605, 792, 840, 1077, 1266, 1487
MslI CAYNNNNRTG 1 cut(s) 237
MspCI CTTAAG 1 cut(s) 476
MspI CCGG 2 cut(s) 1703, 1796
MspR9I CCNGG 3 cut(s) 912, 1704, 1797
MunI CAATTG 1 cut(s) 1498
Mva1269I GAATGC 1 cut(s) 1458
MvaI CCWGG 1 cut(s) 912
MvnI CGCG 1 cut(s) 810
MwoI GCNNNNNNNGC 3 cut(s) 717, 1116, 1500
NciI CCSGG 2 cut(s) 1704, 1797
NdeI CATATG 2 cut(s) 728, 1009
NlaIII CATG 8 cut(s) 236, 304, 647, 803, 1119, 1217, 1702, 1795
NlaIV GGNNCC 2 cut(s) 1307, 1921
NmuCI GTSAC 4 cut(s) 290, 740, 1163, 1592
NsbI TGCGCA 1 cut(s) 532
NsiI ATGCAT 1 cut(s) 1955
NspI RCATGY 2 cut(s) 1119, 1217
PaeI GCATGC 1 cut(s) 1119
PagI TCATGA 1 cut(s) 643
PctI GAATGC 1 cut(s) 1458
PfeI GAWTC 2 cut(s) 5, 95
PflMI CCANNNNNTGG 1 cut(s) 871
PkrI GCNGC 4 cut(s) 922, 1112, 1746, 1778
PleI GAGTC 2 cut(s) 166, 1062
PmaCI CACGTG 1 cut(s) 1638
PmlI CACGTG 1 cut(s) 1638
PpsI GAGTC 2 cut(s) 166, 1062
Ppu21I YACGTR 1 cut(s) 1638
PshAI GACNNNNGTC 1 cut(s) 1259
PshBI ATTAAT 1 cut(s) 792
Psp124BI GAGCTC 1 cut(s) 1791
Psp6I CCWGG 1 cut(s) 910
PspCI CACGTG 1 cut(s) 1638
PspGI CCWGG 1 cut(s) 910
PspN4I GGNNCC 2 cut(s) 1307, 1921
PspPI GGNCC 1 cut(s) 1290
PsuI RGATCY 3 cut(s) 265, 285, 304
RsaI GTAC 4 cut(s) 217, 981, 1307, 1852
RsaNI GTAC 4 cut(s) 216, 980, 1306, 1851
RseI CAYNNNNRTG 1 cut(s) 237
SacI GAGCTC 1 cut(s) 1791
SaqAI TTAA 9 cut(s) 20, 342, 477, 605, 792, 840, 1077, 1266, 1487
SatI GCNGC 4 cut(s) 921, 1111, 1745, 1777
Sau96I GGNCC 1 cut(s) 1290
ScaI AGTACT 1 cut(s) 217
SchI GAGTC 2 cut(s) 167, 1062
ScrFI CCNGG 3 cut(s) 912, 1704, 1797
SduI GDGCHC 3 cut(s) 1698, 1791, 1842
SfaNI GCATC 6 cut(s) 39, 49, 187, 367, 424, 1878
SinI GGWCC 1 cut(s) 1290
SmiMI CAYNNNNRTG 1 cut(s) 237
SmlI CTYRAG 3 cut(s) 380, 476, 1715
SmoI CTYRAG 3 cut(s) 380, 476, 1715
SphI GCATGC 1 cut(s) 1119
Sse9I AATT 8 cut(s) 502, 540, 577, 631, 841, 1347, 1498, 1729
SsiI CCGC 7 cut(s) 419, 699, 808, 921, 1105, 1341, 1817
SspI AATATT 2 cut(s) 1419, 1756
SspMI CTAG 6 cut(s) 219, 942, 1241, 1575, 1656, 1808
SstI GAGCTC 1 cut(s) 1791
StyD4I CCNGG 3 cut(s) 910, 1702, 1795
StyI CCWWGG 2 cut(s) 53, 585
TaaI ACNGT 3 cut(s) 239, 314, 1151
TaiI ACGT 4 cut(s) 1077, 1234, 1640, 1654
TaqI TCGA 5 cut(s) 174, 297, 817, 972, 1329
TaqII GACCGA 2 cut(s) 528, 729
TasI AATT 8 cut(s) 502, 540, 577, 631, 841, 1347, 1498, 1729
TatI WGTACW 2 cut(s) 215, 1850
TauI GCSGC 1 cut(s) 923
TfiI GAWTC 2 cut(s) 5, 95
Tru1I TTAA 9 cut(s) 20, 342, 477, 605, 792, 840, 1077, 1266, 1487
Tru9I TTAA 9 cut(s) 20, 342, 477, 605, 792, 840, 1077, 1266, 1487
TscAI CASTG 2 cut(s) 493, 1524
TseFI GTSAC 4 cut(s) 290, 740, 1163, 1592
TseI GCWGC 3 cut(s) 1110, 1744, 1776
Tsp45I GTSAC 4 cut(s) 290, 740, 1163, 1592
TspDTI ATGAA 7 cut(s) 758, 1159, 1220, 1242, 1488, 1722, 1944
TspGWI ACGGA 3 cut(s) 665, 975, 1425
TspRI CASTG 2 cut(s) 493, 1524
Van91I CCANNNNNTGG 1 cut(s) 871
Vha464I CTTAAG 1 cut(s) 476
VpaK11BI GGWCC 1 cut(s) 1290
VspI ATTAAT 1 cut(s) 792
XagI CCTNNNNNAGG 1 cut(s) 380
XapI RAATTY 1 cut(s) 631
XceI RCATGY 2 cut(s) 1119, 1217
XcmI CCANNNNNNNNNTGG 2 cut(s) 149, 1187
XspI CTAG 6 cut(s) 219, 942, 1241, 1575, 1656, 1808
ZrmI AGTACT 1 cut(s) 217
Zsp2I ATGCAT 1 cut(s) 1955
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.