Rh3BG264400

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000226
Physical Location & Seq
Reverse (-)
25606368 .. 25607915
1548 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG264400.1

Sequence Viewer

Length: 1548 bp
ATGCACCGTCAACACCCGCTTTTTCTCCTCAGCATAATTCAAGATATCAGGGTACGCTGCCTTTGTAACGCCTGCAAGCAACTTTGCAAATTCCGATACAACTGTTCCATATGTGACTTCAACCTCCACCTCAAGTGTGCCTCTGATTGGCAAAATATTATTGCAAGTGACTCTCACGAGCATCAGTTCACAATTCTCCGGAAGGAAATGTCTGACCTCCAAGTTAACTGTGACGTTTGTGGTGAGTACTGGACTGGCACCGTCTACTACATGTGTAGCATTTGCCAGCTCTTGGTTCATAAGGAATGCGCTTCATTACCACGTAACATCAAAATACGTGGCCACCAACACCACCTGAAGCTGACTTGGTTCCTTGAAGACATTTACCCCAACCATCTGTCATGGAAAGTCTGCTCTATAAGCATTGATAAATGTCGCGCTGTTTACTGTTGCAGTGAATGTAGCAGTTATGTTGCCCATGTTGCATGTACGACAGGTGAGTACTCTCGAGAAGAAAGCTTTTTGGACATAGCCCTGAATGATGATGAGTCTGTTGATGCTCCAGAGATCAAACACTTCAGTCACCAACATTTATTAGCCGCTAATGATCCTTGTGAGGTAGTTAAATATGATCACAGAGAAATTATTTGTGAGGGATGCATCCGCCCCATAACTGCCATCAAAGATTCCTTTTACAGCTGCACCAAACAAGAAGACGAGTTATGCACTTTCTTTCTCCATAAGATATGTGCTCAATTACCAAAAAAGATGCTTCTCCCTCTACTTCACCAACACCAGTTCACACTCGTCGCAAGGGCACCTTCTATTGGTGGCGTGTTCCAGTGTTATATGTGTGGCACTTTTAACCAAGGCTTTACACATACTTGTGAGGAATGTGCCTTACCAACAGGTGAAACTGTTTTCTACCTTGACCTTCAATGCAGTACTTACTGGGAAAACAAGGCTCTTAAACATGAGTCTCATGTTCACCGACTCCTCCTCAACACAGAATGGGAGGACGTCTACTGCAACAGTTGTGGGTGTGATATATTTTTCTGCTTTAGTTGTAAGAGATGTGAATTTCATCTCTGTATTCCATGTGTCAGATTACCTCTTACTGCTATGCACCGATACGACGATCATCCTCTCAAGCTCACATATGCTAGTGTTGAAGATGAGCTGGGTTACTATTGTGAAATATGCGAAGGAAAACGAGATCCAACACATTGGTTCTACCGCTGCAACGATTGTGACTTTGATTGCCATACTCATTGCATTTTGGGGAGGTATCAGCAAGTCAAGCTAGGGAGTACTTACAAGCACGATGCTCATGGTCAACACCTCGTCACCCTTGTTGATAAGTCAAAGAGCCCCATTCCTTTCGATAAGAGAGAAAACATTCTTCCCTGCCAGAAGTGTGGAAAACCTTGTGAAGGATTGGTGTTTGAATGTGAAGAGTGCAATATAAATATCCACCGAGAAGGATGTTGTCAGGTAACAGATTTGGAGAGTTCTGTCAAGTCTCCAAAGAAGAGCTCAGGCAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

515

Amino Acids

59.55

Weight (kDa)

6.23

Isoelectric Point (pI)

48.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 2 - 47 3.3e-07 C1 domain
C1_2 PF03107 58 - 104 1.1e-07 C1 domain
C1_2 PF03107 377 - 426 1.4e-08 C1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1023
AccB1I GGYRCC 2 cut(s) 257, 817
AccB7I CCANNNNNTGG 1 cut(s) 292
AccI GTMKAC 2 cut(s) 264, 1023
AccII CGCG 1 cut(s) 438
AccIII TCCGGA 1 cut(s) 198
AciI CCGC 4 cut(s) 17, 600, 664, 1237
AclWI GGATC 2 cut(s) 602, 1211
AcoI YGGCCR 1 cut(s) 340
AcsI RAATTY 2 cut(s) 89, 1079
AcuI CTGAAG 2 cut(s) 377, 562
AcyI GRCGYC 1 cut(s) 1020
AfaI GTAC 6 cut(s) 54, 248, 490, 503, 946, 1312
AfiI CCNNNNNNNGG 4 cut(s) 147, 292, 827, 1433
AflIII ACRYGT 1 cut(s) 270
AgsI TTSAA 6 cut(s) 41, 121, 377, 938, 1172, 1448
AluBI AGCT 8 cut(s) 289, 361, 519, 699, 1153, 1180, 1303, 1536
AluI AGCT 8 cut(s) 289, 361, 519, 699, 1153, 1180, 1303, 1536
Alw21I GWGCWC 2 cut(s) 754, 1538
Alw26I GTCTC 2 cut(s) 984, 1527
AlwI GGATC 2 cut(s) 602, 1211
Ama87I CYCGRG 1 cut(s) 507
Aor13HI TCCGGA 1 cut(s) 198
AoxI GGCC 1 cut(s) 340
ApeKI GCWGC 3 cut(s) 57, 699, 1239
ApoI RAATTY 2 cut(s) 89, 1079
Asp700I GAANNNNTTC 1 cut(s) 1398
AspLEI GCGC 2 cut(s) 311, 440
AsuHPI GGTGA 7 cut(s) 254, 509, 575, 779, 923, 980, 1339
AvaI CYCGRG 1 cut(s) 507
BaeGI GKGCMC 1 cut(s) 820
BaeI ACNNNNGTAYC 2 cut(s) 88, 121
BalI TGGCCA 1 cut(s) 342
BanI GGYRCC 2 cut(s) 257, 817
BanII GRGCYC 2 cut(s) 1373, 1538
BauI CACGAG 1 cut(s) 176
BbsI GAAGAC 2 cut(s) 384, 720
Bbv12I GWGCWC 2 cut(s) 754, 1538
BbvCI CCTCAGC 1 cut(s) 29
BbvI GCAGC 3 cut(s) 44, 686, 1226
BccI CCATC 2 cut(s) 402, 686
BclI TGATCA 1 cut(s) 631
BcoDI GTCTC 2 cut(s) 984, 1527
BfaI CTAG 2 cut(s) 1164, 1304
BisI GCNGC 4 cut(s) 58, 600, 700, 1240
BlsI GCNGC 4 cut(s) 59, 601, 701, 1241
BmcAI AGTACT 4 cut(s) 248, 503, 946, 1312
BmeT110I CYCGRG 1 cut(s) 507
BmiI GGNNCC 3 cut(s) 259, 371, 819
BmrI ACTGGG 1 cut(s) 961
BmsI GCATC 6 cut(s) 190, 547, 647, 669, 759, 1315
BmuI ACTGGG 1 cut(s) 961
BpiI GAAGAC 2 cut(s) 384, 720
BpmI CTGGAG 1 cut(s) 546
Bpu10I CCTNAGC 2 cut(s) 29, 1537
BpuEI CTTGAG 2 cut(s) 116, 1133
BsaAI YACGTR 2 cut(s) 323, 338
BsaHI GRCGYC 1 cut(s) 1020
BsaJI CCNNGG 1 cut(s) 868
BsaWI WCCGGW 1 cut(s) 198
Bsc4I CCNNNNNNNGG 4 cut(s) 147, 292, 827, 1433
Bse1I ACTGG 5 cut(s) 254, 259, 796, 841, 956
Bse3DI GCAATG 1 cut(s) 1270
BseAI TCCGGA 1 cut(s) 198
BseDI CCNNGG 1 cut(s) 868
BseGI GGATG 4 cut(s) 660, 662, 1141, 1490
BseLI CCNNNNNNNGG 4 cut(s) 147, 292, 827, 1433
BseMI GCAATG 1 cut(s) 1270
BseMII CTCAG 1 cut(s) 43
BseNI ACTGG 5 cut(s) 254, 259, 796, 841, 956
BseRI GAGGAG 3 cut(s) 17, 986, 989
BseSI GKGCMC 1 cut(s) 820
BseXI GCAGC 3 cut(s) 44, 686, 1226
BseYI CCCAGC 1 cut(s) 1180
BsgI GTGCAG 1 cut(s) 685
Bsh1236I CGCG 1 cut(s) 438
BshFI GGCC 1 cut(s) 342
BshNI GGYRCC 2 cut(s) 257, 817
BsiHKAI GWGCWC 2 cut(s) 754, 1538
BsiHKCI CYCGRG 1 cut(s) 507
BsiSI CCGG 1 cut(s) 199
BslI CCNNNNNNNGG 4 cut(s) 147, 292, 827, 1433
BsmAI GTCTC 2 cut(s) 984, 1527
BsmI GAATGC 1 cut(s) 311
BsnI GGCC 1 cut(s) 342
BsoBI CYCGRG 1 cut(s) 507
Bsp1286I GDGCHC 4 cut(s) 754, 820, 1373, 1538
Bsp13I TCCGGA 1 cut(s) 198
Bsp143I GATC 5 cut(s) 567, 607, 631, 1138, 1216
BspACI CCGC 4 cut(s) 17, 600, 664, 1237
BspANI GGCC 1 cut(s) 342
BspCNI CTCAG 1 cut(s) 42
BspEI TCCGGA 1 cut(s) 198
BspFNI CGCG 1 cut(s) 438
BspLI GGNNCC 3 cut(s) 259, 371, 819
BspPI GGATC 2 cut(s) 602, 1211
BspQI GCTCTTC 1 cut(s) 1526
BspT107I GGYRCC 2 cut(s) 257, 817
BsrDI GCAATG 1 cut(s) 1270
BsrI ACTGG 5 cut(s) 254, 259, 796, 841, 956
BssECI CCNNGG 1 cut(s) 868
BssMI GATC 5 cut(s) 567, 607, 631, 1138, 1216
BssNI GRCGYC 1 cut(s) 1020
BssSI CACGAG 1 cut(s) 176
BssT1I CCWWGG 1 cut(s) 868
Bst2BI CACGAG 1 cut(s) 176
Bst4CI ACNGT 7 cut(s) 8, 104, 230, 262, 449, 919, 1034
Bst6I CTCTTC 2 cut(s) 1449, 1526
BstACI GRCGYC 1 cut(s) 1020
BstBAI YACGTR 2 cut(s) 323, 338
BstC8I GCNNGC 3 cut(s) 73, 77, 287
BstDEI CTNAG 2 cut(s) 29, 1537
BstENI CCTNNNNNAGG 1 cut(s) 1431
BstF5I GGATG 4 cut(s) 660, 662, 1141, 1490
BstFNI CGCG 1 cut(s) 438
BstHHI GCGC 2 cut(s) 311, 440
BstKTI GATC 5 cut(s) 570, 610, 634, 1141, 1219
BstMAI GTCTC 2 cut(s) 984, 1527
BstMBI GATC 5 cut(s) 567, 607, 631, 1138, 1216
BstMWI GCNNNNNNNGC 3 cut(s) 420, 482, 1300
BstNSI RCATGY 2 cut(s) 274, 489
BstSLI GKGCMC 1 cut(s) 820
BstUI CGCG 1 cut(s) 438
BstV1I GCAGC 3 cut(s) 44, 686, 1226
BstV2I GAAGAC 2 cut(s) 384, 720
BstX2I RGATCY 1 cut(s) 1216
BstXI CCANNNNNNTGG 2 cut(s) 1227, 1418
BstYI RGATCY 1 cut(s) 1216
BsuRI GGCC 1 cut(s) 342
BtsCI GGATG 4 cut(s) 660, 662, 1141, 1490
BtsI GCAGTG 1 cut(s) 460
BtsIMutI CAGTG 2 cut(s) 460, 848
Cac8I GCNNGC 3 cut(s) 73, 77, 287
CfoI GCGC 2 cut(s) 311, 440
Csp6I GTAC 6 cut(s) 53, 247, 489, 502, 945, 1311
CspCI CAANNNNNGTGG 4 cut(s) 319, 354, 1018, 1053
CviAII CATG 8 cut(s) 271, 402, 479, 486, 974, 983, 1098, 1331
CviQI GTAC 6 cut(s) 53, 247, 489, 502, 945, 1311
DdeI CTNAG 2 cut(s) 29, 1537
DpnI GATC 5 cut(s) 569, 609, 633, 1140, 1218
DpnII GATC 5 cut(s) 567, 607, 631, 1138, 1216
EaeI YGGCCR 1 cut(s) 340
Eam1104I CTCTTC 2 cut(s) 1449, 1526
EarI CTCTTC 2 cut(s) 1449, 1526
EciI GGCGGA 1 cut(s) 653
Ecl136II GAGCTC 1 cut(s) 1536
Eco130I CCWWGG 1 cut(s) 868
Eco24I GRGCYC 2 cut(s) 1373, 1538
Eco32I GATATC 1 cut(s) 46
Eco53kI GAGCTC 1 cut(s) 1536
Eco57I CTGAAG 2 cut(s) 377, 562
Eco88I CYCGRG 1 cut(s) 507
EcoICRI GAGCTC 1 cut(s) 1536
EcoNI CCTNNNNNAGG 1 cut(s) 1431
EcoRV GATATC 1 cut(s) 46
EcoT14I CCWWGG 1 cut(s) 868
EcoT22I ATGCAT 1 cut(s) 662
EcoT38I GRGCYC 2 cut(s) 1373, 1538
ErhI CCWWGG 1 cut(s) 868
FaeI CATG 8 cut(s) 274, 405, 482, 489, 977, 986, 1101, 1334
FalI AAGNNNNNCTT 2 cut(s) 805, 837
FatI CATG 8 cut(s) 270, 401, 478, 485, 973, 982, 1097, 1330
FauI CCCGC 1 cut(s) 24
FauNDI CATATG 2 cut(s) 110, 1159
FbaI TGATCA 1 cut(s) 631
FblI GTMKAC 2 cut(s) 264, 1023
Fnu4HI GCNGC 4 cut(s) 58, 600, 700, 1240
FokI GGATG 4 cut(s) 647, 669, 1128, 1497
FriOI GRGCYC 2 cut(s) 1373, 1538
Fsp4HI GCNGC 4 cut(s) 58, 600, 700, 1240
FspBI CTAG 2 cut(s) 1164, 1304
GlaI GCGC 2 cut(s) 310, 439
GluI GCNGC 4 cut(s) 58, 600, 700, 1240
GsaI CCCAGC 1 cut(s) 1184
GsuI CTGGAG 1 cut(s) 546
HaeIII GGCC 1 cut(s) 342
HapII CCGG 1 cut(s) 199
HhaI GCGC 2 cut(s) 311, 440
Hin1I GRCGYC 1 cut(s) 1020
Hin1II CATG 8 cut(s) 274, 405, 482, 489, 977, 986, 1101, 1334
Hin6I GCGC 2 cut(s) 309, 438
HinP1I GCGC 2 cut(s) 309, 438
HincII GTYRAC 3 cut(s) 11, 226, 1337
HindII GTYRAC 3 cut(s) 11, 226, 1337
HindIII AAGCTT 1 cut(s) 517
HinfI GANTC 5 cut(s) 170, 548, 686, 977, 993
HpaI GTTAAC 1 cut(s) 226
HpaII CCGG 1 cut(s) 199
HphI GGTGA 7 cut(s) 254, 509, 575, 779, 923, 980, 1339
Hpy166II GTNNAC 9 cut(s) 11, 189, 226, 265, 445, 801, 988, 1024, 1337
Hpy188I TCNGA 4 cut(s) 95, 145, 214, 1106
Hpy188III TCNNGA 6 cut(s) 41, 176, 199, 507, 509, 563
Hpy8I GTNNAC 9 cut(s) 11, 189, 226, 265, 445, 801, 988, 1024, 1337
Hpy99I CGWCG 2 cut(s) 812, 1139
HpyAV CCTTC 6 cut(s) 196, 831, 944, 1199, 1427, 1475
HpyCH4III ACNGT 7 cut(s) 8, 104, 230, 262, 449, 919, 1034
HpyCH4IV ACGT 4 cut(s) 234, 322, 337, 1020
HpyF10VI GCNNNNNNNGC 3 cut(s) 420, 482, 1300
HpyF3I CTNAG 2 cut(s) 29, 1537
HpySE526I ACGT 4 cut(s) 234, 322, 337, 1020
Hsp92I GRCGYC 1 cut(s) 1020
Hsp92II CATG 8 cut(s) 274, 405, 482, 489, 977, 986, 1101, 1334
HspAI GCGC 2 cut(s) 309, 438
Kpn2I TCCGGA 1 cut(s) 198
Ksp22I TGATCA 1 cut(s) 631
KspAI GTTAAC 1 cut(s) 226
Kzo9I GATC 5 cut(s) 567, 607, 631, 1138, 1216
LguI GCTCTTC 1 cut(s) 1526
LmnI GCTCC 1 cut(s) 565
Lsp1109I GCAGC 3 cut(s) 44, 686, 1226
LweI GCATC 6 cut(s) 190, 547, 647, 669, 759, 1315
MaeI CTAG 2 cut(s) 1164, 1304
MaeII ACGT 4 cut(s) 234, 322, 337, 1020
MalI GATC 5 cut(s) 569, 609, 633, 1140, 1218
MboI GATC 5 cut(s) 567, 607, 631, 1138, 1216
MboII GAAGA 7 cut(s) 389, 524, 725, 1184, 1394, 1466, 1543
MflI RGATCY 1 cut(s) 1216
MhlI GDGCHC 4 cut(s) 754, 820, 1373, 1538
MlsI TGGCCA 1 cut(s) 342
MluCI AATT 6 cut(s) 36, 89, 192, 642, 755, 1079
MluNI TGGCCA 1 cut(s) 342
MlyI GAGTC 4 cut(s) 164, 557, 986, 987
MmeI TCCRAC 1 cut(s) 1244
Mox20I TGGCCA 1 cut(s) 342
Mph1103I ATGCAT 1 cut(s) 662
MroI TCCGGA 1 cut(s) 198
MroXI GAANNNNTTC 1 cut(s) 1398
MscI TGGCCA 1 cut(s) 342
MseI TTAA 4 cut(s) 225, 624, 864, 969
MslI CAYNNNNRTG 1 cut(s) 885
Msp20I TGGCCA 1 cut(s) 342
MspA1I CMGCKG 2 cut(s) 699, 1239
MspI CCGG 1 cut(s) 199
Mva1269I GAATGC 1 cut(s) 311
MvnI CGCG 1 cut(s) 438
MwoI GCNNNNNNNGC 3 cut(s) 420, 482, 1300
NdeI CATATG 2 cut(s) 110, 1159
NdeII GATC 5 cut(s) 567, 607, 631, 1138, 1216
NlaIII CATG 8 cut(s) 274, 405, 482, 489, 977, 986, 1101, 1334
NlaIV GGNNCC 3 cut(s) 259, 371, 819
NmuCI GTSAC 6 cut(s) 113, 167, 230, 581, 1250, 1345
NsiI ATGCAT 1 cut(s) 662
NspI RCATGY 2 cut(s) 274, 489
PaeR7I CTCGAG 1 cut(s) 507
PciI ACATGT 1 cut(s) 270
PciSI GCTCTTC 1 cut(s) 1526
PctI GAATGC 1 cut(s) 311
PdmI GAANNNNTTC 1 cut(s) 1398
PfeI GAWTC 1 cut(s) 686
PflMI CCANNNNNTGG 1 cut(s) 292
PkrI GCNGC 4 cut(s) 59, 601, 701, 1241
PleI GAGTC 4 cut(s) 164, 556, 985, 987
PpsI GAGTC 4 cut(s) 164, 556, 985, 987
Ppu21I YACGTR 2 cut(s) 323, 338
PscI ACATGT 1 cut(s) 270
Psp124BI GAGCTC 1 cut(s) 1538
PspFI CCCAGC 1 cut(s) 1180
PspN4I GGNNCC 3 cut(s) 259, 371, 819
PsuI RGATCY 1 cut(s) 1216
PvuII CAGCTG 1 cut(s) 699
RsaI GTAC 6 cut(s) 54, 248, 490, 503, 946, 1312
RsaNI GTAC 6 cut(s) 53, 247, 489, 502, 945, 1311
RseI CAYNNNNRTG 1 cut(s) 885
SacI GAGCTC 1 cut(s) 1538
SapI GCTCTTC 1 cut(s) 1526
SaqAI TTAA 4 cut(s) 225, 624, 864, 969
SatI GCNGC 4 cut(s) 58, 600, 700, 1240
Sau3AI GATC 5 cut(s) 567, 607, 631, 1138, 1216
ScaI AGTACT 4 cut(s) 248, 503, 946, 1312
SchI GAGTC 4 cut(s) 164, 557, 986, 987
SduI GDGCHC 4 cut(s) 754, 820, 1373, 1538
SfaNI GCATC 6 cut(s) 190, 547, 647, 669, 759, 1315
Sfr274I CTCGAG 1 cut(s) 507
SlaI CTCGAG 1 cut(s) 507
SmiMI CAYNNNNRTG 1 cut(s) 885
SmlI CTYRAG 3 cut(s) 131, 507, 1148
SmoI CTYRAG 3 cut(s) 131, 507, 1148
Sse9I AATT 6 cut(s) 36, 89, 192, 642, 755, 1079
SsiI CCGC 4 cut(s) 17, 600, 664, 1237
SspI AATATT 1 cut(s) 157
SspMI CTAG 2 cut(s) 1164, 1304
SstI GAGCTC 1 cut(s) 1538
StyI CCWWGG 1 cut(s) 868
TaaI ACNGT 7 cut(s) 8, 104, 230, 262, 449, 919, 1034
TaiI ACGT 4 cut(s) 237, 325, 340, 1023
TaqI TCGA 2 cut(s) 508, 1383
TasI AATT 6 cut(s) 36, 89, 192, 642, 755, 1079
TatI WGTACW 4 cut(s) 246, 501, 944, 1310
TauI GCSGC 1 cut(s) 602
TfiI GAWTC 1 cut(s) 686
Tru1I TTAA 4 cut(s) 225, 624, 864, 969
Tru9I TTAA 4 cut(s) 225, 624, 864, 969
TscAI CASTG 2 cut(s) 460, 848
TseFI GTSAC 6 cut(s) 113, 167, 230, 581, 1250, 1345
TseI GCWGC 3 cut(s) 57, 699, 1239
Tsp45I GTSAC 6 cut(s) 113, 167, 230, 581, 1250, 1345
TspDTI ATGAA 3 cut(s) 287, 303, 1073
TspRI CASTG 2 cut(s) 460, 848
Van91I CCANNNNNTGG 1 cut(s) 292
XagI CCTNNNNNAGG 1 cut(s) 1431
XapI RAATTY 2 cut(s) 89, 1079
XceI RCATGY 2 cut(s) 274, 489
XhoI CTCGAG 1 cut(s) 507
XmiI GTMKAC 2 cut(s) 264, 1023
XmnI GAANNNNTTC 1 cut(s) 1398
XspI CTAG 2 cut(s) 1164, 1304
ZraI GACGTC 1 cut(s) 1021
ZrmI AGTACT 4 cut(s) 248, 503, 946, 1312
Zsp2I ATGCAT 1 cut(s) 662
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.