AT3G48400

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000226
Physical Location & Seq
Forward (+)
17923678 .. 17925589
1912 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G48400.1

Sequence Viewer

Length: 1860 bp
ATGGAGAGATCAGTAGATTTACCGATTCACAAGCATCCATTATACCATTCATCAAGGTTTATAAATGGTCGTTGCCGCGGTTGCAAGCAAACCTCACCTATCTATAGTGGCTACCGTTGCAATGACTCTGATTGTAACCATGTTTGGTATCACAAAGAATGTGGCGAATCATTACCGGAGATCAATCATCCTTCCCATCTCGAGCATCCGCTCTGCTTAATCGACTACAGGGGAAGTGGTACGTGTGCTTTTTGTGGAGCTTTCTTGTTTGGTCCTACGTATCATTGTTGGATATGCGCCTTTAATATCGATATAGCTTGTGCGAGAAAACAACTACCTCCACTTGCTGCTATTGAAAATCCCAAATGTCATAACCATTCACTTGTTCTTTTGGAGAAGCAAGTGAAGAAAGATCATTGTGGAGTTTGCAAGAAAACAGTTTTTGGTATGTATCCTTACGTTTGTCTTGAGTGTGATGTGTATTTCCACGTCGAATGCATAAATATATCGCGGGAGGTCCACCATTCTTCTCATACTAATCACACTCTCGAGCTTTTCGGATCTGAGTCGCTACCTGATAGCGCTCAAAAGACTTGTCTTTTGTGTGATGACGTATCAGATCACTTGATTTATCATTGTTCCGTTTGCAACTTCAGCATCTGTGTTTATTGTGCGATAAATCCTCCACCGCTTGCTATAGAACATCTTAAGACTCACGAGCATACGCTAACTCTCTTGCCTAGACAAGTTAAGTTTATTTGCAATGCTTGTGGAATGAAAGGTGATGGATGTCCTTACTTTTGTCTTGGATGTGGTTACTTAATCCATCGGAAATGCATCGATTTACCTCGCGTCATTAACATCAATCGTCATGATCATCGCATCTCTCTCACGCATCATCTTGGTCTTCAGTATTCAGAATGTGGAGTATGTCGTCAAAGTGTTAATGGATACTACGGAGGTTATTCTTGCTCTCTTTGTCCCAACTATGTTGTTCATCCACAATGTGCAATGAAAGATGATGTATGGGACGGAATAGAACTCGAAGGGACTCCTGAAGATAGTGAGCAAGATACCGCGCCATTCGAGGTGGTTGATGACAACACGATAAAACATTTCAGCCATGAAAAACATAATTTGATGCTCAACAAGAATGGTATCATCACTCAACATGATGAAATCACACGTTGCCAAGCATGTGTCCTTCCTCTATCGTCAGATCCTAGCTACAGTTGTGGTCAATGTGATTATGTTCTTCATGAAACATGTGCAAATCTCCCTCGAAAGAAAAGGCATGTGTTCAACAACAAACCATTTACGTTACACACAGGAGGTAAAGATTCTTCTAGGAATTGGTTTGAGTGTGATGCTTGTAGAACAATCTCCAATGGTTTTAGATACGTTTCTGGTGATTGGATTCTAGATGTGCATTGCGGTTCGATGTCAGAACCATTGCTCCATGATGGTCATTCACATCCGTTATATTACTACAGAAGGCAAGGCAAGTCATGTCGTTCGTGTCACAACAAAGTGGTGAAACCTAGAGTACTATGTTGTGATACTTGTGACTTTGATTTGGATTTCTACTGTGCTAATTTACCTAAAACGGTAAAACATTGCTACGACGAGCATCCTCTTTCTCTATGCCACGGCGAAGATGATGTGATTAAGGATAACAAATATTGGTGTGACATATGCGAAACAGAAACCGATCCAAAGAAATGGTTCTACACTTGTTATGACTGCGGGGGCGGAACATTAATGTCGATGGACGTGAGTATGAAGTTGTTCCTAACAGCAAGAGTTCTCGACCATTCTGCGACCAATGCCATTCTCGATGTAAAGATCGCTTCATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2

Protein Analysis

619

Amino Acids

70.41

Weight (kDa)

6.37

Isoelectric Point (pI)

49.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 64 - 108 7.5e-06 C1 domain
C1_2 PF03107 122 - 167 1.6e-06 C1 domain
C1_2 PF03107 177 - 225 1e-07 C1 domain
C1_2 PF03107 237 - 280 9e-10 C1 domain
C1_2 PF03107 289 - 337 2e-10 C1 domain
C1_2 PF03107 373 - 424 7.2e-11 C1 domain
C1_2 PF03107 540 - 582 4.5e-07 C1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 62
AccBSI CCGCTC 1 cut(s) 211
AccII CGCG 4 cut(s) 78, 511, 852, 1079
AciI CCGC 9 cut(s) 76, 78, 209, 511, 689, 1077, 1434, 1746, 1752
AclWI GGATC 3 cut(s) 568, 1214, 1706
AcuI CTGAAG 3 cut(s) 637, 893, 1077
AdeI CACNNNGTG 1 cut(s) 1007
AfaI GTAC 2 cut(s) 241, 1548
AfeI AGCGCT 1 cut(s) 583
AflII CTTAAG 1 cut(s) 707
AflIII ACRYGT 3 cut(s) 242, 1184, 1265
AgsI TTSAA 2 cut(s) 356, 1303
AjiI CACGTC 2 cut(s) 490, 1774
AloI GAACNNNNNNTCC 2 cut(s) 1440, 1472
AluBI AGCT 4 cut(s) 260, 317, 553, 1227
AluI AGCT 4 cut(s) 260, 317, 553, 1227
AlwI GGATC 3 cut(s) 568, 1214, 1706
AlwNI CAGNNNCTG 1 cut(s) 660
Ama87I CYCGRG 2 cut(s) 200, 548
Aor51HI AGCGCT 1 cut(s) 583
ApeKI GCWGC 1 cut(s) 347
ArsI GACNNNNNNTTYG 4 cut(s) 580, 583, 612, 615
AseI ATTAAT 1 cut(s) 1760
Asp700I GAANNNNTTC 2 cut(s) 1724, 1787
AspLEI GCGC 3 cut(s) 299, 584, 1081
AspS9I GGNCC 2 cut(s) 272, 517
AsuHPI GGTGA 4 cut(s) 87, 794, 1421, 1546
AvaI CYCGRG 2 cut(s) 200, 548
AvaII GGWCC 2 cut(s) 272, 517
BarI GAAGNNNNNNTAC 2 cut(s) 1327, 1359
BauI CACGAG 1 cut(s) 716
BbsI GAAGAC 1 cut(s) 899
BbvI GCAGC 1 cut(s) 334
BccI CCATC 5 cut(s) 204, 779, 834, 1457, 1762
BceAI ACGGC 1 cut(s) 1666
BcgI CGANNNNNNTGC 2 cut(s) 1799, 1833
BciVI GTATCC 2 cut(s) 462, 944
BclI TGATCA 1 cut(s) 874
BfaI CTAG 5 cut(s) 741, 1224, 1347, 1421, 1542
BfmI CTRYAG 5 cut(s) 103, 226, 696, 1228, 1489
BfoI RGCGCY 1 cut(s) 585
BfrI CTTAAG 1 cut(s) 707
BfuI GTATCC 2 cut(s) 462, 944
BisI GCNGC 2 cut(s) 76, 348
BlsI GCNGC 2 cut(s) 77, 349
BmcAI AGTACT 1 cut(s) 1548
Bme18I GGWCC 2 cut(s) 272, 517
BmeT110I CYCGRG 2 cut(s) 200, 548
BmgBI CACGTC 2 cut(s) 490, 1774
BmgT120I GGNCC 2 cut(s) 272, 517
BmsI GCATC 9 cut(s) 43, 214, 666, 846, 891, 904, 1131, 1357, 1639
BpiI GAAGAC 1 cut(s) 899
BpuEI CTTGAG 1 cut(s) 488
Bsa29I ATCGAT 2 cut(s) 309, 840
BsaAI YACGTR 2 cut(s) 243, 279
BsaJI CCNNGG 2 cut(s) 76, 1648
BsaWI WCCGGW 1 cut(s) 175
BsaXI ACNNNNNCTCC 2 cut(s) 1440, 1470
Bse3DI GCAATG 6 cut(s) 127, 769, 1017, 1429, 1451, 1615
BseCI ATCGAT 2 cut(s) 309, 840
BseDI CCNNGG 2 cut(s) 76, 1648
BseGI GGATG 8 cut(s) 34, 187, 205, 794, 815, 997, 1474, 1630
BseMI GCAATG 6 cut(s) 127, 769, 1017, 1429, 1451, 1615
BseMII CTCAG 1 cut(s) 555
BseXI GCAGC 1 cut(s) 334
Bsh1236I CGCG 4 cut(s) 78, 511, 852, 1079
BshVI ATCGAT 2 cut(s) 309, 840
BsiHKCI CYCGRG 2 cut(s) 200, 548
BsiSI CCGG 1 cut(s) 176
BslFI GGGAC 3 cut(s) 966, 1043, 1063
BsmFI GGGAC 3 cut(s) 966, 1043, 1063
BsmI GAATGC 1 cut(s) 500
BsoBI CYCGRG 2 cut(s) 200, 548
Bsp143I GATC 9 cut(s) 8, 180, 412, 560, 619, 874, 1219, 1711, 1845
BspACI CCGC 9 cut(s) 76, 78, 209, 511, 689, 1077, 1434, 1746, 1752
BspCNI CTCAG 1 cut(s) 556
BspDI ATCGAT 2 cut(s) 309, 840
BspFNI CGCG 4 cut(s) 78, 511, 852, 1079
BspHI TCATGA 2 cut(s) 871, 1258
BspPI GGATC 3 cut(s) 568, 1214, 1706
BspTI CTTAAG 1 cut(s) 707
BsrBI CCGCTC 1 cut(s) 211
BsrDI GCAATG 6 cut(s) 127, 769, 1017, 1429, 1451, 1615
BssECI CCNNGG 2 cut(s) 76, 1648
BssMI GATC 9 cut(s) 8, 180, 412, 560, 619, 874, 1219, 1711, 1845
BssSI CACGAG 1 cut(s) 716
Bst2BI CACGAG 1 cut(s) 716
Bst4CI ACNGT 5 cut(s) 116, 439, 1232, 1589, 1609
BstAFI CTTAAG 1 cut(s) 707
BstBAI YACGTR 2 cut(s) 243, 279
BstC8I GCNNGC 2 cut(s) 86, 693
BstDEI CTNAG 1 cut(s) 564
BstDSI CCRYGG 2 cut(s) 76, 1648
BstF5I GGATG 8 cut(s) 34, 187, 205, 794, 815, 997, 1474, 1630
BstFNI CGCG 4 cut(s) 78, 511, 852, 1079
BstH2I RGCGCY 1 cut(s) 585
BstHHI GCGC 3 cut(s) 299, 584, 1081
BstKTI GATC 9 cut(s) 11, 183, 415, 563, 622, 877, 1222, 1714, 1848
BstMBI GATC 9 cut(s) 8, 180, 412, 560, 619, 874, 1219, 1711, 1845
BstMWI GCNNNNNNNGC 4 cut(s) 81, 117, 654, 1826
BstNSI RCATGY 3 cut(s) 1200, 1269, 1298
BstSFI CTRYAG 5 cut(s) 103, 226, 696, 1228, 1489
BstSNI TACGTA 1 cut(s) 279
BstUI CGCG 4 cut(s) 78, 511, 852, 1079
BstV1I GCAGC 1 cut(s) 334
BstV2I GAAGAC 1 cut(s) 899
BstX2I RGATCY 2 cut(s) 560, 1219
BstXI CCANNNNNNTGG 1 cut(s) 1722
BstYI RGATCY 2 cut(s) 560, 1219
Bsu15I ATCGAT 2 cut(s) 309, 840
BsuI GTATCC 2 cut(s) 462, 944
BsuTUI ATCGAT 2 cut(s) 309, 840
BtgI CCRYGG 2 cut(s) 76, 1648
BtgZI GCGATG 1 cut(s) 863
BtrI CACGTC 2 cut(s) 490, 1774
BtsCI GGATG 8 cut(s) 34, 187, 205, 794, 815, 997, 1474, 1630
Cac8I GCNNGC 2 cut(s) 86, 693
CaiI CAGNNNCTG 1 cut(s) 660
CciI TCATGA 2 cut(s) 871, 1258
CfoI GCGC 3 cut(s) 299, 584, 1081
Cfr13I GGNCC 2 cut(s) 272, 517
Cfr42I CCGCGG 1 cut(s) 79
ClaI ATCGAT 2 cut(s) 309, 840
CseI GACGC 1 cut(s) 841
Csp6I GTAC 2 cut(s) 240, 1547
CspCI CAANNNNNGTGG 4 cut(s) 142, 177, 751, 786
CviJI RGCY 6 cut(s) 111, 260, 317, 553, 1122, 1227
CviKI_1 RGCY 6 cut(s) 111, 260, 317, 553, 1122, 1227
CviQI GTAC 2 cut(s) 240, 1547
DdeI CTNAG 1 cut(s) 564
DpnI GATC 9 cut(s) 10, 182, 414, 562, 621, 876, 1221, 1713, 1847
DpnII GATC 9 cut(s) 8, 180, 412, 560, 619, 874, 1219, 1711, 1845
DraIII CACNNNGTG 1 cut(s) 1007
EciI GGCGGA 1 cut(s) 1767
Eco105I TACGTA 1 cut(s) 279
Eco47I GGWCC 2 cut(s) 272, 517
Eco47III AGCGCT 1 cut(s) 583
Eco57I CTGAAG 3 cut(s) 637, 893, 1077
Eco88I CYCGRG 2 cut(s) 200, 548
EcoT22I ATGCAT 2 cut(s) 500, 839
FaqI GGGAC 3 cut(s) 966, 1043, 1063
FauI CCCGC 2 cut(s) 504, 1739
FauNDI CATATG 1 cut(s) 1694
FbaI TGATCA 1 cut(s) 874
Fnu4HI GCNGC 2 cut(s) 76, 348
FokI GGATG 8 cut(s) 21, 174, 192, 801, 822, 984, 1461, 1617
Fsp4HI GCNGC 2 cut(s) 76, 348
FspBI CTAG 5 cut(s) 741, 1224, 1347, 1421, 1542
GlaI GCGC 3 cut(s) 298, 583, 1080
GluI GCNGC 2 cut(s) 76, 348
HaeII RGCGCY 1 cut(s) 585
HapII CCGG 1 cut(s) 176
HgaI GACGC 1 cut(s) 841
HhaI GCGC 3 cut(s) 299, 584, 1081
Hin6I GCGC 3 cut(s) 297, 582, 1079
HinP1I GCGC 3 cut(s) 297, 582, 1079
HinfI GANTC 8 cut(s) 25, 125, 167, 566, 712, 1051, 1340, 1417
HpaII CCGG 1 cut(s) 176
HphI GGTGA 4 cut(s) 87, 794, 1421, 1546
Hpy166II GTNNAC 1 cut(s) 520
Hpy188I TCNGA 8 cut(s) 130, 560, 565, 619, 831, 919, 1219, 1447
Hpy8I GTNNAC 1 cut(s) 520
Hpy99I CGWCG 2 cut(s) 494, 1628
HpyAV CCTTC 4 cut(s) 201, 1040, 1214, 1488
HpyCH4III ACNGT 5 cut(s) 116, 439, 1232, 1589, 1609
HpyCH4IV ACGT 9 cut(s) 242, 278, 459, 489, 612, 1186, 1319, 1401, 1773
HpyF10VI GCNNNNNNNGC 4 cut(s) 81, 117, 654, 1826
HpyF3I CTNAG 1 cut(s) 564
HpySE526I ACGT 9 cut(s) 242, 278, 459, 489, 612, 1186, 1319, 1401, 1773
HspAI GCGC 3 cut(s) 297, 582, 1079
Ksp22I TGATCA 1 cut(s) 874
KspI CCGCGG 1 cut(s) 79
Kzo9I GATC 9 cut(s) 8, 180, 412, 560, 619, 874, 1219, 1711, 1845
LmnI GCTCC 2 cut(s) 257, 1461
LpnPI CCDG 6 cut(s) 189, 214, 588, 1068, 1314, 1392
Lsp1109I GCAGC 1 cut(s) 334
LweI GCATC 9 cut(s) 43, 214, 666, 846, 891, 904, 1131, 1357, 1639
MaeI CTAG 5 cut(s) 741, 1224, 1347, 1421, 1542
MaeII ACGT 9 cut(s) 242, 278, 459, 489, 612, 1186, 1319, 1401, 1773
MaeIII GTNAC 6 cut(s) 134, 815, 1320, 1520, 1565, 1688
MalI GATC 9 cut(s) 10, 182, 414, 562, 621, 876, 1221, 1713, 1847
MbiI CCGCTC 1 cut(s) 211
MboI GATC 9 cut(s) 8, 180, 412, 560, 619, 874, 1219, 1711, 1845
MboII GAAGA 7 cut(s) 418, 519, 899, 1070, 1247, 1335, 1667
MflI RGATCY 2 cut(s) 560, 1219
MluCI AATT 3 cut(s) 1135, 1351, 1594
MlyI GAGTC 4 cut(s) 119, 575, 706, 1045
MmeI TCCRAC 1 cut(s) 269
Mph1103I ATGCAT 2 cut(s) 500, 839
MroXI GAANNNNTTC 2 cut(s) 1724, 1787
MseI TTAA 9 cut(s) 218, 303, 708, 750, 821, 858, 945, 1668, 1760
MspA1I CMGCKG 1 cut(s) 78
MspCI CTTAAG 1 cut(s) 707
MspI CCGG 1 cut(s) 176
Mva1269I GAATGC 1 cut(s) 500
MvnI CGCG 4 cut(s) 78, 511, 852, 1079
MwoI GCNNNNNNNGC 4 cut(s) 81, 117, 654, 1826
NdeI CATATG 1 cut(s) 1694
NdeII GATC 9 cut(s) 8, 180, 412, 560, 619, 874, 1219, 1711, 1845
NmuCI GTSAC 3 cut(s) 1520, 1565, 1688
NsiI ATGCAT 2 cut(s) 500, 839
NspI RCATGY 3 cut(s) 1200, 1269, 1298
PaeR7I CTCGAG 2 cut(s) 200, 548
PagI TCATGA 2 cut(s) 871, 1258
PciI ACATGT 1 cut(s) 1265
PctI GAATGC 1 cut(s) 500
PdmI GAANNNNTTC 2 cut(s) 1724, 1787
PfeI GAWTC 4 cut(s) 25, 167, 1340, 1417
PkrI GCNGC 2 cut(s) 77, 349
PleI GAGTC 4 cut(s) 119, 574, 706, 1045
PpsI GAGTC 4 cut(s) 119, 574, 706, 1045
Ppu21I YACGTR 2 cut(s) 243, 279
PscI ACATGT 1 cut(s) 1265
PshBI ATTAAT 1 cut(s) 1760
PsiI TTATAA 1 cut(s) 62
PspPI GGNCC 2 cut(s) 272, 517
PstNI CAGNNNCTG 1 cut(s) 660
PsuI RGATCY 2 cut(s) 560, 1219
RsaI GTAC 2 cut(s) 241, 1548
RsaNI GTAC 2 cut(s) 240, 1547
SacII CCGCGG 1 cut(s) 79
SaqAI TTAA 9 cut(s) 218, 303, 708, 750, 821, 858, 945, 1668, 1760
SatI GCNGC 2 cut(s) 76, 348
Sau3AI GATC 9 cut(s) 8, 180, 412, 560, 619, 874, 1219, 1711, 1845
Sau96I GGNCC 2 cut(s) 272, 517
ScaI AGTACT 1 cut(s) 1548
SchI GAGTC 4 cut(s) 119, 575, 706, 1045
SfaNI GCATC 9 cut(s) 43, 214, 666, 846, 891, 904, 1131, 1357, 1639
SfcI CTRYAG 5 cut(s) 103, 226, 696, 1228, 1489
Sfr274I CTCGAG 2 cut(s) 200, 548
Sfr303I CCGCGG 1 cut(s) 79
SgrBI CCGCGG 1 cut(s) 79
SinI GGWCC 2 cut(s) 272, 517
SlaI CTCGAG 2 cut(s) 200, 548
SmlI CTYRAG 4 cut(s) 200, 467, 548, 707
SmoI CTYRAG 4 cut(s) 200, 467, 548, 707
SnaBI TACGTA 1 cut(s) 279
Sse9I AATT 3 cut(s) 1135, 1351, 1594
SsiI CCGC 9 cut(s) 76, 78, 209, 511, 689, 1077, 1434, 1746, 1752
SspI AATATT 1 cut(s) 1682
SspMI CTAG 5 cut(s) 741, 1224, 1347, 1421, 1542
TaaI ACNGT 5 cut(s) 116, 439, 1232, 1589, 1609
TaiI ACGT 9 cut(s) 245, 281, 462, 492, 615, 1189, 1322, 1404, 1776
TasI AATT 3 cut(s) 1135, 1351, 1594
TatI WGTACW 1 cut(s) 1546
TauI GCSGC 1 cut(s) 78
TfiI GAWTC 4 cut(s) 25, 167, 1340, 1417
Tru1I TTAA 9 cut(s) 218, 303, 708, 750, 821, 858, 945, 1668, 1760
Tru9I TTAA 9 cut(s) 218, 303, 708, 750, 821, 858, 945, 1668, 1760
TseFI GTSAC 3 cut(s) 1520, 1565, 1688
TseI GCWGC 1 cut(s) 347
Tsp45I GTSAC 3 cut(s) 1520, 1565, 1688
TspGWI ACGGA 4 cut(s) 631, 972, 1047, 1467
Vha464I CTTAAG 1 cut(s) 707
VpaK11BI GGWCC 2 cut(s) 272, 517
VspI ATTAAT 1 cut(s) 1760
XbaI TCTAGA 1 cut(s) 1420
XceI RCATGY 3 cut(s) 1200, 1269, 1298
XhoI CTCGAG 2 cut(s) 200, 548
XmnI GAANNNNTTC 2 cut(s) 1724, 1787
XspI CTAG 5 cut(s) 741, 1224, 1347, 1421, 1542
ZrmI AGTACT 1 cut(s) 1548
Zsp2I ATGCAT 2 cut(s) 500, 839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.