Rmu_sc0005725.1_g000009

C1 domain

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005725.1
Physical Location & Seq
Forward (+)
66108 .. 71603
5496 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005725.1_g000009.1.cds

Sequence Viewer

Length: 4122 bp
atggataagcagcagcttaaacactttggtcacaggcacccattgatgttgaaggaacaatatggcggtctaccagtttcatgtgaggcatgtggcgatgcagtgctaggtcctcactacagttgcaaccaatgtttcgacaaattcattctccataagtcatgtgcgcagctaccaagggagatgcttcagcaccctttgcacagcaagcacccacttaaacttcggacgaagatttcaagaggcaaatggtttgaatgtgatgcttgtcgggcacgatccaatgccttctcctatagatgtcgcccatgtgagttccacctcgacgtcaaatgtgctttcaatttcagaaacacagacagtatagtacatttcagtcacaagcatgtattgagcttgagtactgaaaatcaatctgaagagggaccaccactattgtgtactgggtgcttagagcaagtccttggccctagatacatttgcgaaattcctttcgagagggagagaagctgctcatccattgttctgcatcaatcttgtgcgaagctatctcgtgagatccagcacccgatgcaccgccaacacccacttattctcaatcaaaatggagcacgagaatcccactgtgatgcttgtggcaaagattgcagccgcagattcaattacagttgtttccgatgtgacttcaacctcgacctcaaatgtgcttccgagaaaggcttcaaacatttcagtcacgagcatccattaatgttccagaaggggggaggagacgacaagaagaaaggatatactggtccactagttgtttgcgatgggtgccagaaccaaatacttggccctagttacacttgcatcagtacatatcgcggtcttaaatgctgtttcaatctccacaagtcatgtgcagacttaccccttgagattcggcacccagtacaccgtcaacatccgctttttcttctcaatacaattgagaatatcagagttaaaaaatgctcatgtaatgcctgcaatcaaccttgcagataccgctacagctgttccatatgcgatttcaaccttgacctcaactgtgcctccaattggcgaaaaattatagacactgaatctcatgagcatcagtttacggtgatcccccggaaggaaatggcccagctccaccttatatgtgacgtttgtggggagtactactggagtcgcgctgcctactacttctgtagcatctgccagctctgggtccataaggaatgtgcttcatttccacgcgacaccaaaataccggagcaccaacaccgcctcaaactaacctggtcccttgaagacatttaccccaaggaccacgtttgtaaaatctgctctacgaatattgataagtgtcgtactgtatattattgtcaggaatgttgcggatatgttgcccacactacatgcatggcagttgagtacttccaggaggaagcaaacaaaaacagaaccgttagtattgaagatgatgattatgagtctgatgatgctgcggagatcaaacacttcagtcatcaacatcgtttagtctctaaagatcatcgtcaggaggtcaaggttgacagaataatttcttgtcagggttgcattcgacccatcactgaagacttctacagctgtactaaacaagaagaagaatcttgccatttctatctccacaaaacttgtgctcgattgccagaaaggacgcttctccctttgcttcaccaacaccagttaatactcctcgctcgggcgccttctattgacggcgtgtttcaatgttctatatgtggtatctttcaccaaggctttgtatacagttgtgaggatcaatgtactttgccaaccggaaaaaaccctttctaccttgaccttgagtgcagcatttattgggagaacagagatcttaaacatgagtctcatgctcaccccctccccctcgaaaaaaactgggaggaagtctgttgcaggggttgtggttctaaaatatttttcttattcagttgtaagagatgcaattttcatctttgcatagcctgtgttagattacctcttactgctaggcaccgatacgacaagcatcctctaaagctcacctatgaaagtattgaagacgagctaggtgaatactactgtgagatatgtgaaggaaaaaggaatccagcacattggttctactggtgcaaagagtgcgagtttgactgtcatcctcattgcattatagggaggtatcctcaagttaagttggggagcacttacaagcacgacgctcatgtccaacaccccgtcactcttgttagcaagtggaagagccccattcgaggcgataagagagacaacattcttccttgtgagaagtgcgtccataaattcttaccccagattgttgaaagagtttcagatcaggcactggctgctatcccagcaattaacagtgaaggtgtacaacagagacttgatcacgtccgaacgtactatgagcttctaaacgtaccccgcgagatgcaacacccaatgcaccagcaacacccacttattctcaatctaaatggagcacgagaatcccactgtgatgcttgtgacaaaaattgtagccacagattcacttacagttgttttcaatgtgacttcaaccttgacctcaaatgtgcttccgagaaaggctacgtgcatttcagtcacgagcatccactaatgttcaagaatctgggagataataaaaaagagtttgctccattagttatttgtgatgggtgccgggacccaatattgggctctagttatacttaccgaggtcacaaatgctgtttcattctccacaagtcatgtgcagacttacccggcgagatccagcaccctgtgcaccgtcaacacccactttctctgctcaatacaattcaagatatcaaagttcgttgctcatgtaatgcctgcaatcaaccttgcatgtaccgctaccgctgctccatatgtgatctcaatcttcacctcaattgtgccaccaattggggaaagattgtcgacactgaatctcatgagcacctgtttaagttgatctcccggaaggaaatggcccagctccacctcatatgtgacgtttgtggggagtactggagtggagttgactactacctctgtagcatctgccagctctgggtccataaggaatgtgcttcatttccacgcgacaccaaaatacccggccacgaacaccgcctcaagctaacctggttccttgaagacatttaccccaaggaccagatttgtaaaatctgctgtacgaatattgataagtatcgtactgtatattattgtcaggaatgttgcggatatgttgcccacactacatgcatggatgttgagtacttccagaaagaagaaaacatagacagaaccgttaatatttatgagtttgatggtgctggagagatcgaacacttcagtcatcaacatcctttagtcgctaatgatcatcgtcaggaggttaaggatgacagaatacttacttgtcagggttgcatacttgcattcgacccatcactgaacacttctacagctgtactaaacaagaagaagagtcttgccatgtctatctccacaaaacttgtgctctatcgccagaaaggacgcttctccgtttgcttcaccaacaccacctgtgttggattacctcttactgctaggcaccgatacgacacgcatcctctaaagctcacctataaaagtattgaagacgagctaggtgaatactactgtttgatatgtgaaggaaaaagggatccagcacattggttctactggtgcaacgagtgcgagtttgactgtcatcctcattgtattatagggaggtatccgcgagtcgagttggggagcacttacgagcacgaggctcatgtccaacacccggtcactcttgttagcaagtggaagagccccattccgggcgataaaagagacaacattcttccttgtaagaagtgcgatgaactttgccaaggattagtatttgaatgcagagagtgcaatataaatttccatcgagacggatgttgtgtaactacacattcggaaagttctctcaggcctcctcagatcgaagttgatgttgtgtga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1373

Amino Acids

159.5

Weight (kDa)

7.24

Isoelectric Point (pI)

42.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2282
AatII GACGTC 1 cut(s) 330
Acc16I TGCGCA 1 cut(s) 168
AccB1I GGYRCC 7 cut(s) 36, 819, 930, 1762, 2073, 2763, 3693
AccB7I CCANNNNNTGG 1 cut(s) 3015
AccI GTMKAC 3 cut(s) 70, 1824, 3030
AccII CGCG 6 cut(s) 870, 1203, 1269, 2508, 3195, 3865
AclWI GGATC 7 cut(s) 273, 553, 1129, 1845, 2851, 3782, 3795
AcoI YGGCCR 1 cut(s) 3211
AcsI RAATTY 4 cut(s) 143, 486, 2378, 4039
AcuI CTGAAG 5 cut(s) 173, 438, 1519, 1650, 3433
AcyI GRCGYC 2 cut(s) 327, 1763
AdeI CACNNNGTG 1 cut(s) 2869
AhlI ACTAGT 1 cut(s) 802
AjiI CACGTC 1 cut(s) 2473
AjnI CCWGG 3 cut(s) 1310, 1452, 3236
AleI CACNNNNGTG 1 cut(s) 436
Alw26I GTCTC 7 cut(s) 765, 1561, 1932, 2337, 2455, 3957, 4044
Alw44I GTGCAC 1 cut(s) 2870
AlwI GGATC 7 cut(s) 273, 553, 1129, 1845, 2851, 3782, 3795
AlwNI CAGNNNCTG 1 cut(s) 2419
Ama87I CYCGRG 1 cut(s) 1758
AoxI GGCC 6 cut(s) 466, 838, 1152, 3081, 3211, 4091
ApaLI GTGCAC 1 cut(s) 2870
ApoI RAATTY 4 cut(s) 143, 486, 2378, 4039
AseI ATTAAT 1 cut(s) 749
Asp700I GAANNNNTTC 2 cut(s) 719, 1597
AspLEI GCGC 3 cut(s) 169, 1205, 1765
AsuC2I CCSGG 7 cut(s) 1141, 2768, 2850, 3070, 3210, 3914, 3951
AvaI CYCGRG 1 cut(s) 1758
AvaII GGWCC 9 cut(s) 110, 425, 797, 1240, 1314, 1339, 2770, 3166, 3265
BaeGI GKGCMC 2 cut(s) 277, 2874
BamHI GGATCC 1 cut(s) 3787
BanI GGYRCC 7 cut(s) 36, 819, 930, 1762, 2073, 2763, 3693
BanII GRGCYC 3 cut(s) 2324, 2786, 3944
BauI CACGAG 6 cut(s) 552, 612, 737, 2565, 2690, 3893
BbsI GAAGAC 5 cut(s) 1329, 1638, 2127, 3255, 3747
BccI CCATC 6 cut(s) 809, 1631, 2753, 3419, 3553, 4053
BceAI ACGGC 1 cut(s) 1792
BciT130I CCWGG 3 cut(s) 1312, 1454, 3238
BciVI GTATCC 2 cut(s) 2250, 3870
BclI TGATCA 2 cut(s) 2467, 3478
BcnI CCSGG 7 cut(s) 1141, 2768, 2850, 3070, 3210, 3914, 3951
BcoDI GTCTC 7 cut(s) 765, 1561, 1932, 2337, 2455, 3957, 4044
BcuI ACTAGT 1 cut(s) 802
BfaI CTAG 9 cut(s) 107, 471, 803, 843, 2070, 2129, 2787, 3690, 3749
BfmI CTRYAG 7 cut(s) 118, 295, 1036, 1219, 1639, 3145, 3561
BfoI RGCGCY 1 cut(s) 1766
BfuI GTATCC 2 cut(s) 2250, 3870
BglII AGATCT 1 cut(s) 1912
BmcAI AGTACT 5 cut(s) 403, 1190, 1448, 3119, 3374
Bme18I GGWCC 9 cut(s) 110, 425, 797, 1240, 1314, 1339, 2770, 3166, 3265
BmeT110I CYCGRG 1 cut(s) 1758
BmgBI CACGTC 1 cut(s) 2473
BmrI ACTGGG 3 cut(s) 453, 929, 1969
BmuI ACTGGG 3 cut(s) 453, 929, 1969
BpiI GAAGAC 5 cut(s) 1329, 1638, 2127, 3255, 3747
BplI GAGNNNNNCTC 2 cut(s) 2227, 2259
BpmI CTGGAG 3 cut(s) 1216, 3142, 3453
BpuEI CTTGAG 5 cut(s) 418, 941, 1904, 2229, 3212
BpuMI CCSGG 7 cut(s) 1141, 2768, 2850, 3070, 3210, 3914, 3951
BsaAI YACGTR 1 cut(s) 2677
BsaBI GATNNNNATC 2 cut(s) 2988, 3303
BsaHI GRCGYC 2 cut(s) 327, 1763
BsaJI CCNNGG 8 cut(s) 176, 463, 1139, 1335, 1813, 2800, 3261, 4003
BsaWI WCCGGW 2 cut(s) 1282, 1856
BsaXI ACNNNNNCTCC 4 cut(s) 1064, 1094, 2957, 2987
Bse3DI GCAATG 1 cut(s) 2221
Bse8I GATNNNNATC 2 cut(s) 2988, 3303
BseBI CCWGG 3 cut(s) 1312, 1454, 3238
BseDI CCNNGG 8 cut(s) 176, 463, 1139, 1335, 1813, 2800, 3261, 4003
BseJI GATNNNNATC 2 cut(s) 2988, 3303
BseMI GCAATG 1 cut(s) 2221
BseMII CTCAG 2 cut(s) 4102, 4112
BseRI GAGGAG 3 cut(s) 783, 1742, 4086
BseSI GKGCMC 2 cut(s) 277, 2874
BseYI CCCAGC 3 cut(s) 1155, 2431, 3084
BsgI GTGCAG 3 cut(s) 927, 1909, 2859
Bsh1236I CGCG 6 cut(s) 870, 1203, 1269, 2508, 3195, 3865
BshFI GGCC 6 cut(s) 468, 840, 1154, 3083, 3213, 4093
BshNI GGYRCC 7 cut(s) 36, 819, 930, 1762, 2073, 2763, 3693
BsiHKCI CYCGRG 1 cut(s) 1758
BsiSI CCGG 9 cut(s) 1141, 1283, 1857, 2767, 2850, 3070, 3210, 3914, 3950
BslFI GGGAC 3 cut(s) 438, 1300, 2783
BsmAI GTCTC 7 cut(s) 765, 1561, 1932, 2337, 2455, 3957, 4044
BsmBI CGTCTC 2 cut(s) 765, 4044
BsmFI GGGAC 3 cut(s) 438, 1300, 2783
BsmI GAATGC 3 cut(s) 1614, 3536, 4025
BsnI GGCC 6 cut(s) 468, 840, 1154, 3083, 3213, 4093
BsoBI CYCGRG 1 cut(s) 1758
Bsp1407I TGTACA 1 cut(s) 2452
BspANI GGCC 6 cut(s) 468, 840, 1154, 3083, 3213, 4093
BspCNI CTCAG 2 cut(s) 4101, 4111
BspFNI CGCG 6 cut(s) 870, 1203, 1269, 2508, 3195, 3865
BspHI TCATGA 2 cut(s) 1114, 3043
BspPI GGATC 7 cut(s) 273, 553, 1129, 1845, 2851, 3782, 3795
BspQI GCTCTTC 2 cut(s) 2312, 3932
BspT107I GGYRCC 7 cut(s) 36, 819, 930, 1762, 2073, 2763, 3693
BsrDI GCAATG 1 cut(s) 2221
BsrGI TGTACA 1 cut(s) 2452
BssECI CCNNGG 8 cut(s) 176, 463, 1139, 1335, 1813, 2800, 3261, 4003
BssNAI GTATAC 1 cut(s) 1825
BssNI GRCGYC 2 cut(s) 327, 1763
BssSI CACGAG 6 cut(s) 552, 612, 737, 2565, 2690, 3893
BssT1I CCWWGG 6 cut(s) 176, 463, 1335, 1813, 3261, 4003
Bst1107I GTATAC 1 cut(s) 1825
Bst2BI CACGAG 6 cut(s) 552, 612, 737, 2565, 2690, 3893
Bst2UI CCWGG 3 cut(s) 1312, 1454, 3238
Bst6I CTCTTC 4 cut(s) 414, 2312, 3578, 3932
BstACI GRCGYC 2 cut(s) 327, 1763
BstAPI GCANNNNNTGC 8 cut(s) 199, 571, 645, 2199, 2423, 2869, 3819, 4029
BstAUI TGTACA 1 cut(s) 2452
BstBAI YACGTR 1 cut(s) 2677
BstC8I GCNNGC 5 cut(s) 209, 1012, 1232, 2941, 3158
BstDEI CTNAG 3 cut(s) 451, 4088, 4098
BstFNI CGCG 6 cut(s) 870, 1203, 1269, 2508, 3195, 3865
BstH2I RGCGCY 1 cut(s) 1766
BstHHI GCGC 3 cut(s) 169, 1205, 1765
BstMAI GTCTC 7 cut(s) 765, 1561, 1932, 2337, 2455, 3957, 4044
BstNI CCWGG 3 cut(s) 1312, 1454, 3238
BstNSI RCATGY 5 cut(s) 93, 389, 1434, 2959, 3360
BstSFI CTRYAG 7 cut(s) 118, 295, 1036, 1219, 1639, 3145, 3561
BstSLI GKGCMC 2 cut(s) 277, 2874
BstUI CGCG 6 cut(s) 870, 1203, 1269, 2508, 3195, 3865
BstV2I GAAGAC 5 cut(s) 1329, 1638, 2127, 3255, 3747
BstX2I RGATCY 4 cut(s) 558, 1912, 2856, 3787
BstXI CCANNNNNNTGG 3 cut(s) 836, 2178, 3798
BstYI RGATCY 4 cut(s) 558, 1912, 2856, 3787
BstZ17I GTATAC 1 cut(s) 1825
BsuI GTATCC 2 cut(s) 2250, 3870
BsuRI GGCC 6 cut(s) 468, 840, 1154, 3083, 3213, 4093
BtgZI GCGATG 3 cut(s) 111, 828, 4005
BtrI CACGTC 1 cut(s) 2473
BtsI GCAGTG 1 cut(s) 108
BtsIMutI CAGTG 9 cut(s) 108, 622, 1104, 1626, 2417, 2449, 2575, 3033, 3548
Cac8I GCNNGC 5 cut(s) 209, 1012, 1232, 2941, 3158
CaiI CAGNNNCTG 1 cut(s) 2419
CciI TCATGA 2 cut(s) 1114, 3043
CfoI GCGC 3 cut(s) 169, 1205, 1765
CseI GACGC 4 cut(s) 1723, 2285, 2359, 3645
CsiI ACCWGGT 2 cut(s) 1310, 3236
CspCI CAANNNNNGTGG 8 cut(s) 417, 452, 1673, 1708, 3595, 3630, 3652, 3687
DdeI CTNAG 3 cut(s) 451, 4088, 4098
DinI GGCGCC 1 cut(s) 1764
DraIII CACNNNGTG 1 cut(s) 2869
DrdI GACNNNNNNGTC 1 cut(s) 2282
DseDI GACNNNNNNGTC 1 cut(s) 2282
EaeI YGGCCR 1 cut(s) 3211
Eam1104I CTCTTC 4 cut(s) 414, 2312, 3578, 3932
EarI CTCTTC 4 cut(s) 414, 2312, 3578, 3932
Eco130I CCWWGG 6 cut(s) 176, 463, 1335, 1813, 3261, 4003
Eco147I AGGCCT 1 cut(s) 4093
Eco24I GRGCYC 3 cut(s) 2324, 2786, 3944
Eco32I GATATC 1 cut(s) 2914
Eco47I GGWCC 9 cut(s) 110, 425, 797, 1240, 1314, 1339, 2770, 3166, 3265
Eco57I CTGAAG 5 cut(s) 173, 438, 1519, 1650, 3433
Eco88I CYCGRG 1 cut(s) 1758
EcoO109I RGGNCCY 2 cut(s) 110, 2770
EcoRII CCWGG 3 cut(s) 1310, 1452, 3236
EcoRV GATATC 1 cut(s) 2914
EcoT14I CCWWGG 6 cut(s) 176, 463, 1335, 1813, 3261, 4003
EcoT22I ATGCAT 2 cut(s) 1436, 3362
EcoT38I GRGCYC 3 cut(s) 2324, 2786, 3944
EgeI GGCGCC 1 cut(s) 1764
EheI GGCGCC 1 cut(s) 1764
ErhI CCWWGG 6 cut(s) 176, 463, 1335, 1813, 3261, 4003
Esp3I CGTCTC 2 cut(s) 765, 4044
FaqI GGGAC 3 cut(s) 438, 1300, 2783
FauI CCCGC 1 cut(s) 2513
FauNDI CATATG 3 cut(s) 1049, 2978, 3098
FbaI TGATCA 2 cut(s) 2467, 3478
FblI GTMKAC 3 cut(s) 70, 1824, 3030
FriOI GRGCYC 3 cut(s) 2324, 2786, 3944
FspBI CTAG 9 cut(s) 107, 471, 803, 843, 2070, 2129, 2787, 3690, 3749
FspI TGCGCA 1 cut(s) 168
GlaI GCGC 3 cut(s) 168, 1204, 1764
GsaI CCCAGC 3 cut(s) 1159, 2435, 3088
GsuI CTGGAG 3 cut(s) 1216, 3142, 3453
HaeII RGCGCY 1 cut(s) 1766
HaeIII GGCC 6 cut(s) 468, 840, 1154, 3083, 3213, 4093
HapII CCGG 9 cut(s) 1141, 1283, 1857, 2767, 2850, 3070, 3210, 3914, 3950
HgaI GACGC 4 cut(s) 1723, 2285, 2359, 3645
HhaI GCGC 3 cut(s) 169, 1205, 1765
Hin1I GRCGYC 2 cut(s) 327, 1763
Hin6I GCGC 3 cut(s) 167, 1203, 1763
HinP1I GCGC 3 cut(s) 167, 1203, 1763
HincII GTYRAC 5 cut(s) 947, 1588, 2879, 3031, 3133
HindII GTYRAC 5 cut(s) 947, 1588, 2879, 3031, 3133
HpaII CCGG 9 cut(s) 1141, 1283, 1857, 2767, 2850, 3070, 3210, 3914, 3950
Hpy99I CGWCG 2 cut(s) 329, 2279
HpyAV CCTTC 9 cut(s) 46, 298, 754, 1138, 1776, 2150, 2441, 3067, 3770
HpyCH4IV ACGT 8 cut(s) 327, 1176, 1344, 2472, 2480, 2499, 2676, 3105
HpyF3I CTNAG 3 cut(s) 451, 4088, 4098
HpySE526I ACGT 8 cut(s) 327, 1176, 1344, 2472, 2480, 2499, 2676, 3105
Hsp92I GRCGYC 2 cut(s) 327, 1763
HspAI GCGC 3 cut(s) 167, 1203, 1763
KasI GGCGCC 1 cut(s) 1762
KflI GGGWCCC 1 cut(s) 2770
Ksp22I TGATCA 2 cut(s) 2467, 3478
LguI GCTCTTC 2 cut(s) 2312, 3932
LmnI GCTCC 9 cut(s) 608, 1164, 1285, 2259, 2561, 2746, 2978, 3093, 3879
MabI ACCWGGT 2 cut(s) 1310, 3236
MaeI CTAG 9 cut(s) 107, 471, 803, 843, 2070, 2129, 2787, 3690, 3749
MaeII ACGT 8 cut(s) 327, 1176, 1344, 2472, 2480, 2499, 2676, 3105
MfeI CAATTG 4 cut(s) 972, 1084, 3001, 3013
MflI RGATCY 4 cut(s) 558, 1912, 2856, 3787
Mly113I GGCGCC 1 cut(s) 1763
MlyI GAGTC 5 cut(s) 1207, 1514, 1934, 3595, 3876
MmeI TCCRAC 3 cut(s) 2311, 3652, 3931
Mph1103I ATGCAT 2 cut(s) 1436, 3362
MroXI GAANNNNTTC 2 cut(s) 719, 1597
MslI CAYNNNNRTG 4 cut(s) 384, 436, 627, 2580
MspA1I CMGCKG 4 cut(s) 1041, 1644, 2970, 3566
MspI CCGG 9 cut(s) 1141, 1283, 1857, 2767, 2850, 3070, 3210, 3914, 3950
MunI CAATTG 4 cut(s) 972, 1084, 3001, 3013
Mva1269I GAATGC 3 cut(s) 1614, 3536, 4025
MvaI CCWGG 3 cut(s) 1312, 1454, 3238
MvnI CGCG 6 cut(s) 870, 1203, 1269, 2508, 3195, 3865
NarI GGCGCC 1 cut(s) 1763
NciI CCSGG 7 cut(s) 1141, 2768, 2850, 3070, 3210, 3914, 3951
NdeI CATATG 3 cut(s) 1049, 2978, 3098
NsbI TGCGCA 1 cut(s) 168
NsiI ATGCAT 2 cut(s) 1436, 3362
NspI RCATGY 5 cut(s) 93, 389, 1434, 2959, 3360
OliI CACNNNNGTG 1 cut(s) 436
PagI TCATGA 2 cut(s) 1114, 3043
PceI AGGCCT 1 cut(s) 4093
PciSI GCTCTTC 2 cut(s) 2312, 3932
PcsI WCGNNNNNNNCGW 1 cut(s) 2505
PctI GAATGC 3 cut(s) 1614, 3536, 4025
PdmI GAANNNNTTC 2 cut(s) 719, 1597
PflMI CCANNNNNTGG 1 cut(s) 3015
PfoI TCCNGGA 2 cut(s) 1452, 3068
PleI GAGTC 5 cut(s) 1206, 1513, 1933, 3594, 3875
PluTI GGCGCC 1 cut(s) 1766
PpsI GAGTC 5 cut(s) 1206, 1513, 1933, 3594, 3875
Ppu21I YACGTR 1 cut(s) 2677
PpuMI RGGWCCY 2 cut(s) 110, 2770
PshBI ATTAAT 1 cut(s) 749
Psp5II RGGWCCY 2 cut(s) 110, 2770
Psp6I CCWGG 3 cut(s) 1310, 1452, 3236
PspFI CCCAGC 3 cut(s) 1155, 2431, 3084
PspGI CCWGG 3 cut(s) 1310, 1452, 3236
PspPPI RGGWCCY 2 cut(s) 110, 2770
PstNI CAGNNNCTG 1 cut(s) 2419
PsuI RGATCY 4 cut(s) 558, 1912, 2856, 3787
PvuII CAGCTG 3 cut(s) 1041, 1644, 3566
RseI CAYNNNNRTG 4 cut(s) 384, 436, 627, 2580
SalI GTCGAC 1 cut(s) 3029
SapI GCTCTTC 2 cut(s) 2312, 3932
ScaI AGTACT 5 cut(s) 403, 1190, 1448, 3119, 3374
SchI GAGTC 5 cut(s) 1207, 1514, 1934, 3595, 3876
SexAI ACCWGGT 2 cut(s) 1310, 3236
SfcI CTRYAG 7 cut(s) 118, 295, 1036, 1219, 1639, 3145, 3561
SfoI GGCGCC 1 cut(s) 1764
SinI GGWCC 9 cut(s) 110, 425, 797, 1240, 1314, 1339, 2770, 3166, 3265
SmiMI CAYNNNNRTG 4 cut(s) 384, 436, 627, 2580
SmlI CTYRAG 5 cut(s) 397, 920, 1883, 2244, 3227
SmoI CTYRAG 5 cut(s) 397, 920, 1883, 2244, 3227
SpeI ACTAGT 1 cut(s) 802
SseBI AGGCCT 1 cut(s) 4093
SspDI GGCGCC 1 cut(s) 1762
SspI AATATT 5 cut(s) 1369, 1998, 2778, 3295, 3412
SspMI CTAG 9 cut(s) 107, 471, 803, 843, 2070, 2129, 2787, 3690, 3749
StuI AGGCCT 1 cut(s) 4093
StyI CCWWGG 6 cut(s) 176, 463, 1335, 1813, 3261, 4003
TaiI ACGT 8 cut(s) 330, 1179, 1347, 2475, 2483, 2502, 2679, 3108
TauI GCSGC 1 cut(s) 654
TscAI CASTG 9 cut(s) 108, 629, 1111, 1633, 2424, 2449, 2582, 3040, 3555
TspDTI ATGAA 8 cut(s) 69, 136, 1248, 2021, 2124, 2809, 3174, 4008
TspGWI ACGGA 2 cut(s) 3634, 4068
TspRI CASTG 9 cut(s) 108, 629, 1111, 1633, 2424, 2449, 2582, 3040, 3555
Van91I CCANNNNNTGG 1 cut(s) 3015
VneI GTGCAC 1 cut(s) 2870
VpaK11BI GGWCC 9 cut(s) 110, 425, 797, 1240, 1314, 1339, 2770, 3166, 3265
VspI ATTAAT 1 cut(s) 749
XapI RAATTY 4 cut(s) 143, 486, 2378, 4039
XceI RCATGY 5 cut(s) 93, 389, 1434, 2959, 3360
XmiI GTMKAC 3 cut(s) 70, 1824, 3030
XmnI GAANNNNTTC 2 cut(s) 719, 1597
XspI CTAG 9 cut(s) 107, 471, 803, 843, 2070, 2129, 2787, 3690, 3749
ZraI GACGTC 1 cut(s) 328
ZrmI AGTACT 5 cut(s) 403, 1190, 1448, 3119, 3374
Zsp2I ATGCAT 2 cut(s) 1436, 3362
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.