AT3G43890

BEST Arabidopsis thaliana protein match is Cysteine Histidine-rich C1 domain family protein (TAIR

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
3
OG0000226
Physical Location & Seq
Reverse (-)
15741297 .. 15743612
2316 bp
Loading structure...
UTR
Exon/CDS
Intron
AT3G43890.1

Sequence Viewer

Length: 1986 bp
ATGGACGATTTGAAGGTTAACCTACCGTTCCACGAGCATCCATTAACGCCTGTGAAAATGGAGTCGAAGTGTGATTGGTGTGGAATCAAATTCATACACATATCTGATGGCTACCAATGTGATTCCTGTTTCACTCCTTTATTCCACAAGACATGCGCCAACGATAAGAATATCGCCCACCCTTCTCAAGCGTGTGGCATCATTCTTTATCATACAGTGAATTTTGATAGCGGCAAGTGGAGATGTGCAAAATGTGGAGAAAAGATCTACGATTCCTTATTTTTTGTATGTAACGACTGTGTTTTAAAACCTAGAAGAAAAGGAAGCAGATTTGGTGGTTCTTCATATTTCCATTTCAACTGTGCTAAATACCCACCTTCGGAGGTTATTGATGTTCCTCAGCACCATGACCATAAACTCAAGCTAGAGATGGTGATAAGCAGCTTCACTTGTGCTGCTTGTGGAAAAGATGGTGACGGATATTCGTACAAATGTCAGGAATGTAATTTGACGTTTCATGTGAATTGCGAAAAGTATCCGGCAGAGGTAACCCATTTTTCCCACTTCTTACACCCTCTAAAACTCTTCAAGGGGGAACCACCTGCTTACACTGATGGAAAATGTCGTTTGTGTGGAGAAAAACTTGCTAATTTTGAAGTCTTTTATCATTGCTCCGCTTGTAACTTTAGCTTAGATCTCCAATGTGTTTTTCATCCACCAAAACAAAATCCTCACGACCTAAACATCCATGACCATCCACTCACTCTTATGCCAAAATCCATCTCTTTTACCTGTACCACTTGCGGGCTAAATGGAGATCGGAGCCCATACGTATGTCTTCCTTGCGATTTTACAAGCCACAATGATTGCTCTGGATATCCATGGGTCATAAACATCAACCGCCATGATCATCGTGTTTCTCGCACTTCCCTTATTGGTGTGGTGAATTCAGTATGTGGAATTTGTCGCAAGAAAATGGATTGGAGTTGTGGGGGTTATTCTTGTCAGAAGTGTTCGAGCTATGTGTTTCATACCAAATGCGCTACTAGAGAAGATGTTTGGGACGGCAAAGAAATGAAAGACGAACCTGAAGAAGAGGAAGCTATTCAACCATTCACGATAATCGATGAAAACACAATAAAACATGTCAGCCATAAAGAGCATAACCTAAGACTTGACAAGTCTGGTATTTTTATTGAGGAGAGGATTTGTGAGGCATGTGTTTATCCTATCTATCACCACTCCTTCTATAGCTGCATGAGTTGTAGTTTCATTCTTCACGAGAGTTGCGCCTATCTGCCTCTATGGAAACGACATGTGGTAAGCAACGAACGACATGAGTATAAATATTGGGACTATTTTATTAGATGTTCGGCTTGTAGATTGCTTTCCAATGGTTTTAGATACGAAACAACGCAAACTTCATTGGATTTGCGATGTGCTTCAACTACTGAGCCATTTTTCCATAAAACTCATCCTCATCCCTTATTTTACACATCGCCACAAGGAATCTGCAGTATTTGCAAGAAAGATCATCTTCATGTGCTCAGATGCGTTGAAGATGGTTGTGAATACATCATGGACTATAAGTGCGCTCTATTACCATATGAGGTAAAGCATAGTGTCGACCAACATTTTCTCTCTTTGTGCTATGGTGAAGAAAATGCAAGTGGTAAACATTGGTGTGATATTTGTGAGAAAGAAATGGATCCAAAAACATGGTTTTACACCTCTAAGGATTGTGAGCTTACTTTGCATACAGACTGTGTGCTCGGCGATTTTCGAGGTCTCAAGCCAGAAAGCGAAGAATCGATGTACATCGACGACTTCGAAATGTATGTTAAGGTGGTTCGCAACAACAGTATGTCTCGACCACTTTGCAAACAATGCAAGTCTCGTTGCATATTTCCAGTCATCTTGGAAACATGGAATGAAAGCTGCCTCCGTAATGAATATTATTGCTCTGAAGCTTGTTTCTATTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2

Protein Analysis

661

Amino Acids

76.53

Weight (kDa)

6.37

Isoelectric Point (pI)

48.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 135 - 176 2.4e-10 C1 domain
C1_2 PF03107 186 - 236 7.6e-13 C1 domain
C1_2 PF03107 249 - 290 2.8e-11 C1 domain
C1_2 PF03107 300 - 348 2e-08 C1 domain
C1_2 PF03107 384 - 431 1.5e-09 C1 domain
C1_2 PF03107 541 - 590 7.9e-09 C1 domain
C1-like_CT PF22926 614 - 659 2.1e-13 C1 domain-like, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 610
Acc36I ACCTGC 1 cut(s) 610
AccI GTMKAC 1 cut(s) 1626
AciI CCGC 4 cut(s) 231, 675, 804, 901
AclWI GGATC 2 cut(s) 1703, 1716
AcsI RAATTY 4 cut(s) 89, 220, 946, 960
AcuI CTGAAG 2 cut(s) 1110, 1986
AfaI GTAC 3 cut(s) 488, 796, 1817
AfiI CCNNNNNNNGG 2 cut(s) 379, 804
AflIII ACRYGT 2 cut(s) 1144, 1315
AgsI TTSAA 7 cut(s) 13, 358, 589, 656, 1109, 1446, 1559
AjuI GAANNNNNNNTTGG 2 cut(s) 693, 725
AluBI AGCT 9 cut(s) 424, 444, 690, 1020, 1103, 1254, 1747, 1938, 1970
AluI AGCT 9 cut(s) 424, 444, 690, 1020, 1103, 1254, 1747, 1938, 1970
Alw21I GWGCWC 2 cut(s) 1548, 1773
Alw26I GTCTC 3 cut(s) 1793, 1872, 1899
AlwI GGATC 2 cut(s) 1703, 1716
ApeKI GCWGC 4 cut(s) 441, 455, 1254, 1938
ApoI RAATTY 4 cut(s) 89, 220, 946, 960
Asp700I GAANNNNTTC 1 cut(s) 1104
AspLEI GCGC 4 cut(s) 158, 1043, 1292, 1595
AsuHPI GGTGA 5 cut(s) 445, 485, 955, 1229, 1667
AsuII TTCGAA 1 cut(s) 1830
BamHI GGATCC 1 cut(s) 1708
BanII GRGCYC 1 cut(s) 827
BauI CACGAG 2 cut(s) 32, 1280
BbsI GAAGAC 1 cut(s) 830
Bbv12I GWGCWC 2 cut(s) 1548, 1773
BbvCI CCTCAGC 1 cut(s) 399
BbvI GCAGC 4 cut(s) 442, 453, 1241, 1925
BccI CCATC 7 cut(s) 101, 424, 464, 608, 762, 788, 1556
BceAI ACGGC 1 cut(s) 1081
BcgI CGANNNNNNTGC 2 cut(s) 1860, 1894
BciVI GTATCC 1 cut(s) 546
BclI TGATCA 1 cut(s) 907
BcoDI GTCTC 3 cut(s) 1793, 1872, 1899
BfaI CTAG 3 cut(s) 312, 425, 1047
BfmI CTRYAG 2 cut(s) 1249, 1513
BfuAI ACCTGC 1 cut(s) 610
BfuI GTATCC 1 cut(s) 546
BglII AGATCT 2 cut(s) 264, 694
BisI GCNGC 5 cut(s) 232, 442, 456, 1255, 1939
BlsI GCNGC 5 cut(s) 233, 443, 457, 1256, 1940
BmiI GGNNCC 3 cut(s) 597, 824, 1710
BmsI GCATC 3 cut(s) 46, 207, 1541
BpiI GAAGAC 1 cut(s) 830
Bpu10I CCTNAGC 1 cut(s) 399
Bpu14I TTCGAA 1 cut(s) 1830
BpuEI CTTGAG 3 cut(s) 171, 404, 1775
Bsa29I ATCGAT 2 cut(s) 1125, 1811
BsaAI YACGTR 1 cut(s) 832
BsaBI GATNNNNATC 1 cut(s) 1817
BsaI GGTCTC 1 cut(s) 1793
BsaJI CCNNGG 1 cut(s) 881
BsaXI ACNNNNNCTCC 2 cut(s) 53, 83
Bsc4I CCNNNNNNNGG 2 cut(s) 379, 804
Bse1I ACTGG 1 cut(s) 1910
Bse3DI GCAATG 1 cut(s) 667
Bse8I GATNNNNATC 1 cut(s) 1817
BseCI ATCGAT 2 cut(s) 1125, 1811
BseDI CCNNGG 1 cut(s) 881
BseGI GGATG 6 cut(s) 37, 712, 744, 754, 1474, 1480
BseJI GATNNNNATC 1 cut(s) 1817
BseLI CCNNNNNNNGG 2 cut(s) 379, 804
BseMI GCAATG 1 cut(s) 667
BseMII CTCAG 3 cut(s) 413, 1443, 1561
BseNI ACTGG 1 cut(s) 1910
BseRI GAGGAG 1 cut(s) 1214
BseXI GCAGC 4 cut(s) 442, 453, 1241, 1925
BshVI ATCGAT 2 cut(s) 1125, 1811
BsiHKAI GWGCWC 2 cut(s) 1548, 1773
BsiSI CCGG 1 cut(s) 539
BslFI GGGAC 2 cut(s) 1076, 1367
BslI CCNNNNNNNGG 2 cut(s) 379, 804
BsmAI GTCTC 3 cut(s) 1793, 1872, 1899
BsmFI GGGAC 2 cut(s) 1076, 1367
Bso31I GGTCTC 1 cut(s) 1793
Bsp119I TTCGAA 1 cut(s) 1830
Bsp1286I GDGCHC 3 cut(s) 827, 1548, 1773
Bsp1407I TGTACA 1 cut(s) 1815
Bsp143I GATC 6 cut(s) 264, 694, 817, 907, 1531, 1708
Bsp19I CCATGG 1 cut(s) 881
BspACI CCGC 4 cut(s) 231, 675, 804, 901
BspCNI CTCAG 3 cut(s) 412, 1444, 1560
BspDI ATCGAT 2 cut(s) 1125, 1811
BspLI GGNNCC 3 cut(s) 597, 824, 1710
BspMAI CTGCAG 1 cut(s) 1517
BspMI ACCTGC 1 cut(s) 610
BspPI GGATC 2 cut(s) 1703, 1716
BspT104I TTCGAA 1 cut(s) 1830
BspTNI GGTCTC 1 cut(s) 1793
BsrDI GCAATG 1 cut(s) 667
BsrGI TGTACA 1 cut(s) 1815
BsrI ACTGG 1 cut(s) 1910
BssECI CCNNGG 1 cut(s) 881
BssMI GATC 6 cut(s) 264, 694, 817, 907, 1531, 1708
BssSI CACGAG 2 cut(s) 32, 1280
BssT1I CCWWGG 1 cut(s) 881
Bst2BI CACGAG 2 cut(s) 32, 1280
Bst4CI ACNGT 6 cut(s) 27, 217, 299, 362, 1766, 1862
Bst6I CTCTTC 2 cut(s) 590, 1089
BstAPI GCANNNNNTGC 2 cut(s) 1521, 1887
BstAUI TGTACA 1 cut(s) 1815
BstBAI YACGTR 1 cut(s) 832
BstBI TTCGAA 1 cut(s) 1830
BstC8I GCNNGC 1 cut(s) 806
BstDEI CTNAG 6 cut(s) 399, 691, 1169, 1452, 1547, 1734
BstDSI CCRYGG 1 cut(s) 881
BstEII GGTNACC 1 cut(s) 547
BstF5I GGATG 6 cut(s) 37, 712, 744, 754, 1474, 1480
BstHHI GCGC 4 cut(s) 158, 1043, 1292, 1595
BstKTI GATC 6 cut(s) 267, 697, 820, 910, 1534, 1711
BstMAI GTCTC 3 cut(s) 1793, 1872, 1899
BstMBI GATC 6 cut(s) 264, 694, 817, 907, 1531, 1708
BstMWI GCNNNNNNNGC 3 cut(s) 1521, 1753, 1887
BstNSI RCATGY 4 cut(s) 156, 1148, 1221, 1319
BstPI GGTNACC 1 cut(s) 547
BstSFI CTRYAG 2 cut(s) 1249, 1513
BstSNI TACGTA 1 cut(s) 832
BstV1I GCAGC 4 cut(s) 442, 453, 1241, 1925
BstV2I GAAGAC 1 cut(s) 830
BstX2I RGATCY 3 cut(s) 264, 694, 1708
BstXI CCANNNNNNTGG 1 cut(s) 1719
BstYI RGATCY 3 cut(s) 264, 694, 1708
Bsu15I ATCGAT 2 cut(s) 1125, 1811
BsuI GTATCC 1 cut(s) 546
BsuTUI ATCGAT 2 cut(s) 1125, 1811
BtgI CCRYGG 1 cut(s) 881
BtgZI GCGATG 2 cut(s) 1450, 1482
BtsCI GGATG 6 cut(s) 37, 712, 744, 754, 1474, 1480
BtsIMutI CAGTG 2 cut(s) 222, 609
BveI ACCTGC 1 cut(s) 610
Cac8I GCNNGC 1 cut(s) 806
CfoI GCGC 4 cut(s) 158, 1043, 1292, 1595
ClaI ATCGAT 2 cut(s) 1125, 1811
Csp6I GTAC 3 cut(s) 487, 795, 1816
CspCI CAANNNNNGTGG 2 cut(s) 848, 883
CviQI GTAC 3 cut(s) 487, 795, 1816
DdeI CTNAG 6 cut(s) 399, 691, 1169, 1452, 1547, 1734
DpnI GATC 6 cut(s) 266, 696, 819, 909, 1533, 1710
DpnII GATC 6 cut(s) 264, 694, 817, 907, 1531, 1708
DraI TTTAAA 1 cut(s) 306
Eam1104I CTCTTC 2 cut(s) 590, 1089
EarI CTCTTC 2 cut(s) 590, 1089
Eco105I TACGTA 1 cut(s) 832
Eco130I CCWWGG 1 cut(s) 881
Eco24I GRGCYC 1 cut(s) 827
Eco31I GGTCTC 1 cut(s) 1793
Eco32I GATATC 1 cut(s) 878
Eco57I CTGAAG 2 cut(s) 1110, 1986
Eco91I GGTNACC 1 cut(s) 547
EcoO65I GGTNACC 1 cut(s) 547
EcoRI GAATTC 1 cut(s) 946
EcoRV GATATC 1 cut(s) 878
EcoT14I CCWWGG 1 cut(s) 881
EcoT38I GRGCYC 1 cut(s) 827
ErhI CCWWGG 1 cut(s) 881
FalI AAGNNNNNCTT 2 cut(s) 1521, 1553
FaqI GGGAC 2 cut(s) 1076, 1367
FauI CCCGC 1 cut(s) 797
FauNDI CATATG 1 cut(s) 1606
FbaI TGATCA 1 cut(s) 907
FblI GTMKAC 1 cut(s) 1626
Fnu4HI GCNGC 5 cut(s) 232, 442, 456, 1255, 1939
FokI GGATG 6 cut(s) 24, 699, 731, 741, 1461, 1467
FriOI GRGCYC 1 cut(s) 827
Fsp4HI GCNGC 5 cut(s) 232, 442, 456, 1255, 1939
FspBI CTAG 3 cut(s) 312, 425, 1047
GlaI GCGC 4 cut(s) 157, 1042, 1291, 1594
GluI GCNGC 5 cut(s) 232, 442, 456, 1255, 1939
HapII CCGG 1 cut(s) 539
HhaI GCGC 4 cut(s) 158, 1043, 1292, 1595
Hin6I GCGC 4 cut(s) 156, 1041, 1290, 1593
HinP1I GCGC 4 cut(s) 156, 1041, 1290, 1593
HincII GTYRAC 2 cut(s) 19, 1627
HindII GTYRAC 2 cut(s) 19, 1627
HindIII AAGCTT 1 cut(s) 1968
HinfI GANTC 6 cut(s) 62, 84, 122, 272, 1509, 1808
HpaI GTTAAC 1 cut(s) 19
HpaII CCGG 1 cut(s) 539
HphI GGTGA 5 cut(s) 445, 485, 955, 1229, 1667
Hpy166II GTNNAC 3 cut(s) 19, 1627, 1676
Hpy188I TCNGA 6 cut(s) 106, 382, 822, 1008, 1550, 1966
Hpy188III TCNNGA 6 cut(s) 497, 734, 873, 1117, 1280, 1869
Hpy8I GTNNAC 3 cut(s) 19, 1627, 1676
Hpy99I CGWCG 1 cut(s) 1826
HpyAV CCTTC 4 cut(s) 7, 192, 387, 1255
HpyCH4III ACNGT 6 cut(s) 27, 217, 299, 362, 1766, 1862
HpyCH4IV ACGT 2 cut(s) 512, 831
HpyCH4V TGCA 9 cut(s) 248, 1257, 1515, 1524, 1667, 1756, 1881, 1890, 1902
HpyF10VI GCNNNNNNNGC 3 cut(s) 1521, 1753, 1887
HpyF3I CTNAG 6 cut(s) 399, 691, 1169, 1452, 1547, 1734
HpySE526I ACGT 2 cut(s) 512, 831
HspAI GCGC 4 cut(s) 156, 1041, 1290, 1593
Ksp22I TGATCA 1 cut(s) 907
KspAI GTTAAC 1 cut(s) 19
Kzo9I GATC 6 cut(s) 264, 694, 817, 907, 1531, 1708
LmnI GCTCC 2 cut(s) 677, 822
Lsp1109I GCAGC 4 cut(s) 442, 453, 1241, 1925
LweI GCATC 3 cut(s) 46, 207, 1541
MaeI CTAG 3 cut(s) 312, 425, 1047
MaeII ACGT 2 cut(s) 512, 831
MaeIII GTNAC 4 cut(s) 290, 473, 547, 680
MalI GATC 6 cut(s) 266, 696, 819, 909, 1533, 1710
MboI GATC 6 cut(s) 264, 694, 817, 907, 1531, 1708
MflI RGATCY 3 cut(s) 264, 694, 1708
MhlI GDGCHC 3 cut(s) 827, 1548, 1773
MluCI AATT 7 cut(s) 89, 220, 505, 523, 649, 946, 960
MlyI GAGTC 1 cut(s) 71
MroXI GAANNNNTTC 1 cut(s) 1104
MseI TTAA 4 cut(s) 18, 44, 305, 1842
MslI CAYNNNNRTG 4 cut(s) 767, 832, 1539, 1683
MspI CCGG 1 cut(s) 539
MwoI GCNNNNNNNGC 3 cut(s) 1521, 1753, 1887
NcoI CCATGG 1 cut(s) 881
NdeI CATATG 1 cut(s) 1606
NdeII GATC 6 cut(s) 264, 694, 817, 907, 1531, 1708
NlaIV GGNNCC 3 cut(s) 597, 824, 1710
NmeAIII GCCGAG 1 cut(s) 1752
NmuCI GTSAC 1 cut(s) 473
NspI RCATGY 4 cut(s) 156, 1148, 1221, 1319
NspV TTCGAA 1 cut(s) 1830
PaqCI CACCTGC 1 cut(s) 610
PciI ACATGT 2 cut(s) 1144, 1315
PcsI WCGNNNNNNNCGW 1 cut(s) 1827
PdmI GAANNNNTTC 1 cut(s) 1104
PfeI GAWTC 5 cut(s) 84, 122, 272, 1509, 1808
PkrI GCNGC 5 cut(s) 233, 443, 457, 1256, 1940
PleI GAGTC 1 cut(s) 70
PpsI GAGTC 1 cut(s) 70
Ppu21I YACGTR 1 cut(s) 832
PscI ACATGT 2 cut(s) 1144, 1315
PspEI GGTNACC 1 cut(s) 547
PspN4I GGNNCC 3 cut(s) 597, 824, 1710
PstI CTGCAG 1 cut(s) 1517
PsuI RGATCY 3 cut(s) 264, 694, 1708
RsaI GTAC 3 cut(s) 488, 796, 1817
RsaNI GTAC 3 cut(s) 487, 795, 1816
RseI CAYNNNNRTG 4 cut(s) 767, 832, 1539, 1683
SalI GTCGAC 1 cut(s) 1625
SaqAI TTAA 4 cut(s) 18, 44, 305, 1842
SatI GCNGC 5 cut(s) 232, 442, 456, 1255, 1939
Sau3AI GATC 6 cut(s) 264, 694, 817, 907, 1531, 1708
SchI GAGTC 1 cut(s) 71
SduI GDGCHC 3 cut(s) 827, 1548, 1773
SfaNI GCATC 3 cut(s) 46, 207, 1541
SfcI CTRYAG 2 cut(s) 1249, 1513
SfuI TTCGAA 1 cut(s) 1830
SmiMI CAYNNNNRTG 4 cut(s) 767, 832, 1539, 1683
SmlI CTYRAG 3 cut(s) 186, 419, 1790
SmoI CTYRAG 3 cut(s) 186, 419, 1790
SnaBI TACGTA 1 cut(s) 832
Sse9I AATT 7 cut(s) 89, 220, 505, 523, 649, 946, 960
SsiI CCGC 4 cut(s) 231, 675, 804, 901
SspI AATATT 2 cut(s) 1349, 1955
SspMI CTAG 3 cut(s) 312, 425, 1047
StyI CCWWGG 1 cut(s) 881
TaaI ACNGT 6 cut(s) 27, 217, 299, 362, 1766, 1862
TaiI ACGT 2 cut(s) 515, 834
TaqI TCGA 9 cut(s) 65, 1016, 1125, 1626, 1783, 1811, 1821, 1830, 1870
TasI AATT 7 cut(s) 89, 220, 505, 523, 649, 946, 960
TatI WGTACW 1 cut(s) 1815
TauI GCSGC 1 cut(s) 234
TfiI GAWTC 5 cut(s) 84, 122, 272, 1509, 1808
Tru1I TTAA 4 cut(s) 18, 44, 305, 1842
Tru9I TTAA 4 cut(s) 18, 44, 305, 1842
TscAI CASTG 2 cut(s) 222, 616
TseFI GTSAC 1 cut(s) 473
TseI GCWGC 4 cut(s) 441, 455, 1254, 1938
Tsp45I GTSAC 1 cut(s) 473
TspGWI ACGGA 2 cut(s) 492, 1934
TspRI CASTG 2 cut(s) 222, 616
XapI RAATTY 4 cut(s) 89, 220, 946, 960
XceI RCATGY 4 cut(s) 156, 1148, 1221, 1319
XmiI GTMKAC 1 cut(s) 1626
XmnI GAANNNNTTC 1 cut(s) 1104
XspI CTAG 3 cut(s) 312, 425, 1047
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.