MD14G1057200.v1.1

C1 domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr14
OG0000226
Physical Location & Seq
Forward (+)
5916845 .. 5918197
1353 bp
Loading structure...
UTR
Exon/CDS
Intron
MD14G1057200.v1.1.491

Sequence Viewer

Length: 1353 bp
ATGCAGCCCATTCAATTCACTTGCGGTGTCTGTGGCCTAGTTGGTGAGTATGACAAACAAAACTTCTACCTCTGCAACATCTGCCAGCTCCTTGTCCATGCCAAATGCTCTTGGTTACCACTCCAAGTCAAAATAGAACGGCACCAACATCGCCTCAAGCTTACCTGGTGGTTCCATGACATGTACCCCAAAGACCAAGATTTCTGTGACATTTGCTCAGAAAAAATGGACGGAAACCGTGCTATTTATTGTTGTCATGATCATGAATGTCGTGGTTATACTGCCCACTGTAAATGCATAAGAAAAGAGGGGAAATTCAAGAACATCCTCGTCAATGATGATGATGATGATGAACCATCCACATCTAGACGTCCCCCAACCGATGAGACCACCGCTGATGATAAACCCTTGCAGATCGAGCACTTCAGTCATCCACACATGTTAACCCTCATCGATGGCCAAGAGGTGGCTAGACAAGACGGCCAAGATGAAGGAATTACTTGTAACGGTTGCACGCTACCCATCATGAGGGGTGAGTCTTATAGGTCATGCACAGAACAAGCAATAGAAAAGCCATGTAATTTCTCTCTCCACATAAATTGTGCTAAATTACCCCGAAAGAGGCTTCTCCCACTTCACGAACACGAGCTCACACTCCTTCCAACAGCATCTTCTGTCGGTGGCGTTTTTGAGTGTGACATGTGCGCGTCCTTGAGCCAAGGTTTCTCATACCATTGTCAAAGGTGCGACTACTACCTCGACATTTATTGCAGTATTGTTTATGAGCGTAGGACTCTCCGTTGTGATGCTCATGTTCACACCCTCCGGTTCAGCACAAAGCTCGTGTCCTGCAGAAGTTGTGGTACTCGTGATAAGAATTTCTGCTTCAGATGTGGCAGTGAGAGATGCGACTTCCATCTGTGTATTTCGTGTGTTAAATTACCTCTTACAGTCAGGTACAATTACGACGATCATCCTCTCAAACTCACTTATGCTAGTGTTAAAAATGACCTCGATGAGTACTATTGTGACATATGCGAAGGAATACGAGATCCAGAACATTGGTTCTACTCCTGCCCGGATTGTGACTTTGAATGTCATCCTGATTGCATTAGAGGGACGTATCCGCAAGTCAAGTTAGGGGGCTCTTACAAGCATCGTGATCACCAGCACAACGTCGCCCTTGTTTATAAGAGAAAAAGCGAGATTCCTAATGATAAGAGAGAGCGCTTACTTCCTTGTTCCAACTCCAAGTGTCGTATGATGTGCCAAGGATTGGTTTGTGAATGTTTGGAGTGTGGTATTAATATGCACCTAGGGCACCACTTGTGGGGCTCTCCGATTCTCGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C1_2 Jacalin

Protein Analysis

451

Amino Acids

52.18

Weight (kDa)

6.35

Isoelectric Point (pI)

49.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C1_2 PF03107 142 - 202 2.4e-06 C1 domain
C1_2 PF03107 211 - 257 1e-08 C1 domain
C1_2 PF03107 323 - 371 1.6e-08 C1 domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000226)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G58037 AT1G58037 AT1G60787 AT1G60787 AT1G60787 AT1G60787 AT1G65180 AT1G69150 AT2G04500 AT2G04680 AT2G19650 AT2G19660 AT2G19660 AT2G21810 AT2G21830 AT2G21830 AT2G21840 AT2G21850 AT2G43220 AT3G06990 AT3G07000 AT3G25850 AT3G27473 AT3G27473 AT3G27473 AT3G27473 AT3G27480 AT3G27480 AT3G27490 AT3G27490 AT3G27500 AT3G27500 AT3G27500 AT3G27510 AT3G27510 AT3G28650 AT3G43890 AT3G45530 AT3G45840 AT3G46800 AT3G46810 AT3G48400 AT4G01350 AT4G01740 AT4G01760 AT4G01910 AT4G01920 AT4G01925 AT4G01930 AT4G02180 AT4G02190 AT4G09690 AT4G11390 AT4G11390 AT4G11540 AT4G11550 AT4G13992 AT4G14980 AT4G16015 AT4G16015 AT5G22355 AT5G26190 AT5G29624 AT5G37620 AT5G39471 AT5G40320 AT5G42840 AT5G42840 AT5G43030 AT5G43040 AT5G44770 AT5G45730 AT5G54020 AT5G54020 AT5G54030 AT5G54040 AT5G54050 AT5G59920 AT5G59930 AT5G59930 AT5G59940
fragaria_vesca FvH4_4g12791 FvH4_6g40980 FvH4_6g41040 FvH4_6g47450 FvH4_7g18770
malus_domestica MD00G1084300.v1.1 MD12G1059900.v1.1 MD14G1057000.v1.1 MD14G1057200.v1.1 MD14G1060000.v1.1 MD14G1060100.v1.1
prunus_persica Prupe.7G074300_v2.0.a1 Prupe.7G074400_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G074600_v2.0.a1 Prupe.7G078300_v2.0.a1 Prupe.7G078400_v2.0.a1 Prupe.7G078800_v2.0.a1 Prupe.7G081900_v2.0.a1 Prupe.7G092300_v2.0.a1
pyrus_communis pycom14g04870
rosa_chinensis RchiOBHm_Chr1g0362581 RchiOBHm_Chr3g0480191
rosa_laevigata RLG00000023512 RLG00000023513 RLG00000027637
rosa_multiflora Rmu_co8180116.1_g000001 Rmu_co8226133.1_g000001 Rmu_sc0005725.1_g000009 Rmu_sc0006604.1_g000012 Rmu_sc0015624.1_g000001 Rmu_sc0020879.1_g000005 Rmu_sc0020879.1_g000008
rosa_roxburghii Rroxscaffold_4G00293940 Rroxscaffold_6G00401730
rosa_rugosa Rorug01G0299800.1 Rorug03G0180900 Rorug04G0106000 Rorug04G0106100
rosa_samantha Rh1AG308400 Rh1BG271700 Rh1BG271800 Rh1BG272000 Rh1BG272100 Rh1CG289300 Rh1DG302100 Rh1DG302200 Rh1DG302400 Rh1DG302500 Rh3BG264400 Rh3CG262400 Rh3CG262500 Rh3DG258100 Rh3DG258200 Rh3DG258300 Rh3DG273800 Rh4BG170600 Rh7AG404100 Rh7AG404700 Rh7CG422900
rosa_wichuraiana Rw0G000030 Rw1G027380 Rw1G027390 Rw3G020880

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1191
AatII GACGTC 1 cut(s) 373
AccB1I GGYRCC 2 cut(s) 141, 1320
AccB7I CCANNNNNTGG 2 cut(s) 466, 1276
AccII CGCG 1 cut(s) 707
AciI CCGC 3 cut(s) 24, 393, 1127
AclWI GGATC 1 cut(s) 1046
AcoI YGGCCR 2 cut(s) 457, 481
AcsI RAATTY 2 cut(s) 314, 877
AcuI CTGAAG 2 cut(s) 409, 871
AcyI GRCGYC 1 cut(s) 370
AfaI GTAC 4 cut(s) 185, 865, 959, 1022
AfeI AGCGCT 1 cut(s) 1229
AfiI CCNNNNNNNGG 5 cut(s) 466, 528, 621, 1276, 1330
AflIII ACRYGT 3 cut(s) 180, 438, 699
AgsI TTSAA 3 cut(s) 14, 319, 1094
AjnI CCWGG 1 cut(s) 164
AjuI GAANNNNNNNTTGG 2 cut(s) 655, 687
AluBI AGCT 4 cut(s) 88, 160, 649, 841
AluI AGCT 4 cut(s) 88, 160, 649, 841
Alw21I GWGCWC 2 cut(s) 423, 651
Alw26I GTCTC 1 cut(s) 380
AlwI GGATC 1 cut(s) 1046
Aor51HI AGCGCT 1 cut(s) 1229
AoxI GGCC 3 cut(s) 34, 457, 481
ApeKI GCWGC 1 cut(s) 4
ApoI RAATTY 2 cut(s) 314, 877
ArsI GACNNNNNNTTYG 2 cut(s) 830, 862
AseI ATTAAT 1 cut(s) 1305
AspA2I CCTAGG 1 cut(s) 1315
AspLEI GCGC 2 cut(s) 707, 1230
AsuC2I CCSGG 1 cut(s) 1079
AsuHPI GGTGA 3 cut(s) 56, 545, 1157
AvrII CCTAGG 1 cut(s) 1315
BaeGI GKGCMC 1 cut(s) 1323
BalI TGGCCA 1 cut(s) 459
BanI GGYRCC 2 cut(s) 141, 1320
BanII GRGCYC 3 cut(s) 651, 1148, 1337
BarI GAAGNNNNNNTAC 2 cut(s) 847, 879
BauI CACGAG 3 cut(s) 644, 842, 867
Bbv12I GWGCWC 2 cut(s) 423, 651
BbvI GCAGC 1 cut(s) 16
BccI CCATC 4 cut(s) 364, 449, 530, 924
BceAI ACGGC 2 cut(s) 155, 496
BcgI CGANNNNNNTGC 4 cut(s) 131, 165, 823, 857
BciT130I CCWGG 1 cut(s) 166
BciVI GTATCC 1 cut(s) 1134
BclI TGATCA 2 cut(s) 259, 1162
BcnI CCSGG 1 cut(s) 1079
BcoDI GTCTC 1 cut(s) 380
BfaI CTAG 6 cut(s) 38, 366, 471, 996, 1316, 1351
BfmI CTRYAG 1 cut(s) 850
BfoI RGCGCY 1 cut(s) 1231
BfuI GTATCC 1 cut(s) 1134
BisI GCNGC 1 cut(s) 5
BlnI CCTAGG 1 cut(s) 1315
BlsI GCNGC 1 cut(s) 6
BmcAI AGTACT 1 cut(s) 1022
Bme1390I CCNGG 2 cut(s) 166, 1079
BmiI GGNNCC 3 cut(s) 143, 173, 1322
BmrFI CCNGG 2 cut(s) 166, 1079
BmsI GCATC 4 cut(s) 677, 796, 896, 1165
BpuEI CTTGAG 2 cut(s) 140, 733
BpuMI CCSGG 1 cut(s) 1079
Bsa29I ATCGAT 1 cut(s) 453
BsaHI GRCGYC 1 cut(s) 370
BsaI GGTCTC 1 cut(s) 380
BsaJI CCNNGG 3 cut(s) 718, 1270, 1315
BsaWI WCCGGW 1 cut(s) 825
Bsc4I CCNNNNNNNGG 5 cut(s) 466, 528, 621, 1276, 1330
BseBI CCWGG 1 cut(s) 166
BseCI ATCGAT 1 cut(s) 453
BseDI CCNNGG 3 cut(s) 718, 1270, 1315
BseGI GGATG 5 cut(s) 324, 356, 430, 973, 1099
BseLI CCNNNNNNNGG 5 cut(s) 466, 528, 621, 1276, 1330
BseMII CTCAG 1 cut(s) 231
BseSI GKGCMC 1 cut(s) 1323
BseXI GCAGC 1 cut(s) 16
Bsh1236I CGCG 1 cut(s) 707
BshFI GGCC 3 cut(s) 36, 459, 483
BshNI GGYRCC 2 cut(s) 141, 1320
BshVI ATCGAT 1 cut(s) 453
BsiHKAI GWGCWC 2 cut(s) 423, 651
BsiSI CCGG 2 cut(s) 826, 1079
BslFI GGGAC 2 cut(s) 357, 1132
BslI CCNNNNNNNGG 5 cut(s) 466, 528, 621, 1276, 1330
BsmAI GTCTC 1 cut(s) 380
BsmFI GGGAC 2 cut(s) 357, 1132
BsnI GGCC 3 cut(s) 36, 459, 483
Bso31I GGTCTC 1 cut(s) 380
Bsp1286I GDGCHC 5 cut(s) 423, 651, 1148, 1323, 1337
Bsp143I GATC 5 cut(s) 259, 414, 970, 1051, 1162
BspACI CCGC 3 cut(s) 24, 393, 1127
BspANI GGCC 3 cut(s) 36, 459, 483
BspCNI CTCAG 1 cut(s) 230
BspDI ATCGAT 1 cut(s) 453
BspFNI CGCG 1 cut(s) 707
BspHI TCATGA 3 cut(s) 256, 262, 525
BspLI GGNNCC 3 cut(s) 143, 173, 1322
BspMAI CTGCAG 1 cut(s) 854
BspPI GGATC 1 cut(s) 1046
BspT107I GGYRCC 2 cut(s) 141, 1320
BspTNI GGTCTC 1 cut(s) 380
BssECI CCNNGG 3 cut(s) 718, 1270, 1315
BssMI GATC 5 cut(s) 259, 414, 970, 1051, 1162
BssNI GRCGYC 1 cut(s) 370
BssSI CACGAG 3 cut(s) 644, 842, 867
BssT1I CCWWGG 3 cut(s) 718, 1270, 1315
Bst2BI CACGAG 3 cut(s) 644, 842, 867
Bst2UI CCWGG 1 cut(s) 166
Bst4CI ACNGT 4 cut(s) 239, 290, 509, 952
BstACI GRCGYC 1 cut(s) 370
BstAPI GCANNNNNTGC 1 cut(s) 81
BstC8I GCNNGC 2 cut(s) 86, 515
BstDEI CTNAG 1 cut(s) 217
BstEII GGTNACC 1 cut(s) 114
BstF5I GGATG 5 cut(s) 324, 356, 430, 973, 1099
BstFNI CGCG 1 cut(s) 707
BstH2I RGCGCY 1 cut(s) 1231
BstHHI GCGC 2 cut(s) 707, 1230
BstKTI GATC 5 cut(s) 262, 417, 973, 1054, 1165
BstMAI GTCTC 1 cut(s) 380
BstMBI GATC 5 cut(s) 259, 414, 970, 1051, 1162
BstMWI GCNNNNNNNGC 3 cut(s) 81, 418, 1318
BstNI CCWGG 1 cut(s) 166
BstNSI RCATGY 3 cut(s) 184, 442, 703
BstPI GGTNACC 1 cut(s) 114
BstSCI CCNGG 2 cut(s) 164, 1077
BstSFI CTRYAG 1 cut(s) 850
BstSLI GKGCMC 1 cut(s) 1323
BstUI CGCG 1 cut(s) 707
BstV1I GCAGC 1 cut(s) 16
BstX2I RGATCY 1 cut(s) 1051
BstXI CCANNNNNNTGG 1 cut(s) 1062
BstYI RGATCY 1 cut(s) 1051
Bsu15I ATCGAT 1 cut(s) 453
BsuI GTATCC 1 cut(s) 1134
BsuRI GGCC 3 cut(s) 36, 459, 483
BsuTUI ATCGAT 1 cut(s) 453
BtgZI GCGATG 1 cut(s) 134
BtsCI GGATG 5 cut(s) 324, 356, 430, 973, 1099
BtsI GCAGTG 1 cut(s) 904
BtsIMutI CAGTG 2 cut(s) 286, 904
Cac8I GCNNGC 2 cut(s) 86, 515
CciI TCATGA 3 cut(s) 256, 262, 525
CfoI GCGC 2 cut(s) 707, 1230
ClaI ATCGAT 1 cut(s) 453
CseI GACGC 1 cut(s) 696
CsiI ACCWGGT 1 cut(s) 164
Csp6I GTAC 4 cut(s) 184, 864, 958, 1021
CspCI CAANNNNNGTGG 2 cut(s) 581, 616
CviQI GTAC 4 cut(s) 184, 864, 958, 1021
DdeI CTNAG 1 cut(s) 217
DpnI GATC 5 cut(s) 261, 416, 972, 1053, 1164
DpnII GATC 5 cut(s) 259, 414, 970, 1051, 1162
EaeI YGGCCR 2 cut(s) 457, 481
Ecl136II GAGCTC 1 cut(s) 649
Eco130I CCWWGG 3 cut(s) 718, 1270, 1315
Eco24I GRGCYC 3 cut(s) 651, 1148, 1337
Eco31I GGTCTC 1 cut(s) 380
Eco47III AGCGCT 1 cut(s) 1229
Eco53kI GAGCTC 1 cut(s) 649
Eco57I CTGAAG 2 cut(s) 409, 871
Eco91I GGTNACC 1 cut(s) 114
EcoICRI GAGCTC 1 cut(s) 649
EcoO65I GGTNACC 1 cut(s) 114
EcoRII CCWGG 1 cut(s) 164
EcoT14I CCWWGG 3 cut(s) 718, 1270, 1315
EcoT22I ATGCAT 1 cut(s) 299
EcoT38I GRGCYC 3 cut(s) 651, 1148, 1337
ErhI CCWWGG 3 cut(s) 718, 1270, 1315
FaqI GGGAC 2 cut(s) 357, 1132
FauNDI CATATG 1 cut(s) 1034
FbaI TGATCA 2 cut(s) 259, 1162
Fnu4HI GCNGC 1 cut(s) 5
FokI GGATG 5 cut(s) 311, 343, 417, 960, 1086
FriOI GRGCYC 3 cut(s) 651, 1148, 1337
Fsp4HI GCNGC 1 cut(s) 5
FspBI CTAG 6 cut(s) 38, 366, 471, 996, 1316, 1351
GlaI GCGC 2 cut(s) 706, 1229
GluI GCNGC 1 cut(s) 5
HaeII RGCGCY 1 cut(s) 1231
HaeIII GGCC 3 cut(s) 36, 459, 483
HapII CCGG 2 cut(s) 826, 1079
HgaI GACGC 1 cut(s) 696
HhaI GCGC 2 cut(s) 707, 1230
Hin1I GRCGYC 1 cut(s) 370
Hin6I GCGC 2 cut(s) 705, 1228
HinP1I GCGC 2 cut(s) 705, 1228
HincII GTYRAC 1 cut(s) 444
HindII GTYRAC 1 cut(s) 444
HindIII AAGCTT 1 cut(s) 158
HinfI GANTC 4 cut(s) 536, 793, 1207, 1342
HpaI GTTAAC 1 cut(s) 444
HpaII CCGG 2 cut(s) 826, 1079
HphI GGTGA 3 cut(s) 56, 545, 1157
Hpy166II GTNNAC 2 cut(s) 444, 817
Hpy188I TCNGA 3 cut(s) 220, 890, 1341
Hpy8I GTNNAC 2 cut(s) 444, 817
Hpy99I CGWCG 2 cut(s) 971, 1181
HpyAV CCTTC 3 cut(s) 485, 668, 1034
HpyCH4III ACNGT 4 cut(s) 239, 290, 509, 952
HpyCH4IV ACGT 3 cut(s) 370, 1121, 1176
HpyF10VI GCNNNNNNNGC 3 cut(s) 81, 418, 1318
HpyF3I CTNAG 1 cut(s) 217
HpySE526I ACGT 3 cut(s) 370, 1121, 1176
Hsp92I GRCGYC 1 cut(s) 370
HspAI GCGC 2 cut(s) 705, 1228
Ksp22I TGATCA 2 cut(s) 259, 1162
KspAI GTTAAC 1 cut(s) 444
Kzo9I GATC 5 cut(s) 259, 414, 970, 1051, 1162
LmnI GCTCC 1 cut(s) 93
Lsp1109I GCAGC 1 cut(s) 16
LweI GCATC 4 cut(s) 677, 796, 896, 1165
MabI ACCWGGT 1 cut(s) 164
MaeI CTAG 6 cut(s) 38, 366, 471, 996, 1316, 1351
MaeII ACGT 3 cut(s) 370, 1121, 1176
MaeIII GTNAC 6 cut(s) 114, 206, 503, 695, 1028, 1085
MalI GATC 5 cut(s) 261, 416, 972, 1053, 1164
MboI GATC 5 cut(s) 259, 414, 970, 1051, 1162
MboII GAAGA 1 cut(s) 663
MflI RGATCY 1 cut(s) 1051
MhlI GDGCHC 5 cut(s) 423, 651, 1148, 1323, 1337
MlsI TGGCCA 1 cut(s) 459
MluCI AATT 9 cut(s) 14, 314, 495, 580, 598, 608, 877, 938, 961
MluNI TGGCCA 1 cut(s) 459
MlyI GAGTC 2 cut(s) 545, 787
MmeI TCCRAC 2 cut(s) 686, 1269
Mox20I TGGCCA 1 cut(s) 459
Mph1103I ATGCAT 1 cut(s) 299
MscI TGGCCA 1 cut(s) 459
MseI TTAA 4 cut(s) 443, 936, 1002, 1305
MslI CAYNNNNRTG 1 cut(s) 261
Msp20I TGGCCA 1 cut(s) 459
MspA1I CMGCKG 1 cut(s) 395
MspI CCGG 2 cut(s) 826, 1079
MspR9I CCNGG 2 cut(s) 166, 1079
MvaI CCWGG 1 cut(s) 166
MvnI CGCG 1 cut(s) 707
MwoI GCNNNNNNNGC 3 cut(s) 81, 418, 1318
NciI CCSGG 1 cut(s) 1079
NdeI CATATG 1 cut(s) 1034
NdeII GATC 5 cut(s) 259, 414, 970, 1051, 1162
NlaIV GGNNCC 3 cut(s) 143, 173, 1322
NmuCI GTSAC 4 cut(s) 206, 695, 1028, 1085
NsiI ATGCAT 1 cut(s) 299
NspI RCATGY 3 cut(s) 184, 442, 703
PagI TCATGA 3 cut(s) 256, 262, 525
PciI ACATGT 3 cut(s) 180, 438, 699
PfeI GAWTC 2 cut(s) 1207, 1342
PflMI CCANNNNNTGG 2 cut(s) 466, 1276
PkrI GCNGC 1 cut(s) 6
PleI GAGTC 2 cut(s) 544, 787
PpsI GAGTC 2 cut(s) 544, 787
PscI ACATGT 3 cut(s) 180, 438, 699
PshBI ATTAAT 1 cut(s) 1305
PsiI TTATAA 1 cut(s) 1191
Psp124BI GAGCTC 1 cut(s) 651
Psp6I CCWGG 1 cut(s) 164
PspEI GGTNACC 1 cut(s) 114
PspGI CCWGG 1 cut(s) 164
PspN4I GGNNCC 3 cut(s) 143, 173, 1322
PstI CTGCAG 1 cut(s) 854
PsuI RGATCY 1 cut(s) 1051
RsaI GTAC 4 cut(s) 185, 865, 959, 1022
RsaNI GTAC 4 cut(s) 184, 864, 958, 1021
RseI CAYNNNNRTG 1 cut(s) 261
SacI GAGCTC 1 cut(s) 651
SaqAI TTAA 4 cut(s) 443, 936, 1002, 1305
SatI GCNGC 1 cut(s) 5
Sau3AI GATC 5 cut(s) 259, 414, 970, 1051, 1162
ScaI AGTACT 1 cut(s) 1022
SchI GAGTC 2 cut(s) 545, 787
ScrFI CCNGG 2 cut(s) 166, 1079
SduI GDGCHC 5 cut(s) 423, 651, 1148, 1323, 1337
SexAI ACCWGGT 1 cut(s) 164
SfaNI GCATC 4 cut(s) 677, 796, 896, 1165
SfcI CTRYAG 1 cut(s) 850
SmiMI CAYNNNNRTG 1 cut(s) 261
SmlI CTYRAG 2 cut(s) 155, 712
SmoI CTYRAG 2 cut(s) 155, 712
Sse9I AATT 9 cut(s) 14, 314, 495, 580, 598, 608, 877, 938, 961
SsiI CCGC 3 cut(s) 24, 393, 1127
SspMI CTAG 6 cut(s) 38, 366, 471, 996, 1316, 1351
SstI GAGCTC 1 cut(s) 651
StyD4I CCNGG 2 cut(s) 164, 1077
StyI CCWWGG 3 cut(s) 718, 1270, 1315
TaaI ACNGT 4 cut(s) 239, 290, 509, 952
TaiI ACGT 3 cut(s) 373, 1124, 1179
TaqI TCGA 5 cut(s) 417, 453, 759, 1014, 1347
TasI AATT 9 cut(s) 14, 314, 495, 580, 598, 608, 877, 938, 961
TatI WGTACW 1 cut(s) 1020
TfiI GAWTC 2 cut(s) 1207, 1342
Tru1I TTAA 4 cut(s) 443, 936, 1002, 1305
Tru9I TTAA 4 cut(s) 443, 936, 1002, 1305
TscAI CASTG 2 cut(s) 293, 904
TseFI GTSAC 4 cut(s) 206, 695, 1028, 1085
TseI GCWGC 1 cut(s) 4
Tsp45I GTSAC 4 cut(s) 206, 695, 1028, 1085
TspDTI ATGAA 3 cut(s) 279, 366, 504
TspGWI ACGGA 2 cut(s) 246, 788
TspRI CASTG 2 cut(s) 293, 904
Van91I CCANNNNNTGG 2 cut(s) 466, 1276
VspI ATTAAT 1 cut(s) 1305
XapI RAATTY 2 cut(s) 314, 877
XbaI TCTAGA 1 cut(s) 365
XceI RCATGY 3 cut(s) 184, 442, 703
XmaJI CCTAGG 1 cut(s) 1315
XspI CTAG 6 cut(s) 38, 366, 471, 996, 1316, 1351
ZraI GACGTC 1 cut(s) 371
ZrmI AGTACT 1 cut(s) 1022
Zsp2I ATGCAT 1 cut(s) 299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.