ubiquitin-protein transferase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-RING_2 | PF13639 | 193 - 238 | 3e-11 | Ring finger domain |
| zf-rbx1 | PF12678 | 194 - 238 | 2.4e-07 | RING-H2 zinc finger domain |
| zf-C3HC4 | PF00097 | 194 - 237 | 6.8e-07 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_11 | PF17123 | 194 - 224 | 2.5e-06 | RING-like zinc finger |
| zf-C3HC4_2 | PF13923 | 194 - 237 | 2.2e-06 | Zinc finger, C3HC4 type (RING finger) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 646 |
| Acc65I | GGTACC | 1 cut(s) | 190 |
| AccB1I | GGYRCC | 1 cut(s) | 190 |
| AccI | GTMKAC | 1 cut(s) | 399 |
| AccIII | TCCGGA | 1 cut(s) | 385 |
| AcoI | YGGCCR | 1 cut(s) | 165 |
| AcsI | RAATTY | 2 cut(s) | 140, 158 |
| AcuI | CTGAAG | 1 cut(s) | 56 |
| AfaI | GTAC | 3 cut(s) | 94, 192, 340 |
| AflII | CTTAAG | 1 cut(s) | 485 |
| AflIII | ACRYGT | 1 cut(s) | 335 |
| AgsI | TTSAA | 4 cut(s) | 242, 365, 473, 518 |
| AluBI | AGCT | 3 cut(s) | 286, 297, 476 |
| AluI | AGCT | 3 cut(s) | 286, 297, 476 |
| Alw21I | GWGCWC | 1 cut(s) | 249 |
| Alw26I | GTCTC | 2 cut(s) | 529, 680 |
| Ama87I | CYCGRG | 1 cut(s) | 254 |
| Aor13HI | TCCGGA | 1 cut(s) | 385 |
| AoxI | GGCC | 1 cut(s) | 165 |
| ApoI | RAATTY | 2 cut(s) | 140, 158 |
| Asp718I | GGTACC | 1 cut(s) | 190 |
| AspLEI | GCGC | 2 cut(s) | 264, 647 |
| AsuC2I | CCSGG | 1 cut(s) | 11 |
| AvaI | CYCGRG | 1 cut(s) | 254 |
| BaeGI | GKGCMC | 1 cut(s) | 704 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 438, 471 |
| BalI | TGGCCA | 1 cut(s) | 167 |
| BanI | GGYRCC | 1 cut(s) | 190 |
| BbsI | GAAGAC | 1 cut(s) | 615 |
| Bbv12I | GWGCWC | 1 cut(s) | 249 |
| BceAI | ACGGC | 1 cut(s) | 542 |
| BclI | TGATCA | 3 cut(s) | 379, 619, 627 |
| BcnI | CCSGG | 1 cut(s) | 11 |
| BcoDI | GTCTC | 2 cut(s) | 529, 680 |
| BfaI | CTAG | 2 cut(s) | 17, 504 |
| BfrI | CTTAAG | 1 cut(s) | 485 |
| BlpI | GCTNAGC | 1 cut(s) | 741 |
| Bme1390I | CCNGG | 1 cut(s) | 11 |
| BmeT110I | CYCGRG | 1 cut(s) | 254 |
| BmiI | GGNNCC | 1 cut(s) | 192 |
| BmrFI | CCNGG | 1 cut(s) | 11 |
| BmsI | GCATC | 2 cut(s) | 78, 214 |
| BpiI | GAAGAC | 1 cut(s) | 615 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 741 |
| BpuMI | CCSGG | 1 cut(s) | 11 |
| BsaAI | YACGTR | 1 cut(s) | 338 |
| BsaBI | GATNNNNATC | 1 cut(s) | 381 |
| BsaWI | WCCGGW | 1 cut(s) | 385 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 82, 112 |
| Bse8I | GATNNNNATC | 1 cut(s) | 381 |
| BseAI | TCCGGA | 1 cut(s) | 385 |
| BseGI | GGATG | 3 cut(s) | 69, 382, 394 |
| BseJI | GATNNNNATC | 1 cut(s) | 381 |
| BseMII | CTCAG | 2 cut(s) | 273, 732 |
| BseRI | GAGGAG | 1 cut(s) | 215 |
| BseSI | GKGCMC | 1 cut(s) | 704 |
| BshFI | GGCC | 1 cut(s) | 167 |
| BshNI | GGYRCC | 1 cut(s) | 190 |
| BsiHKAI | GWGCWC | 1 cut(s) | 249 |
| BsiHKCI | CYCGRG | 1 cut(s) | 254 |
| BsiSI | CCGG | 2 cut(s) | 10, 386 |
| BsmAI | GTCTC | 2 cut(s) | 529, 680 |
| BsnI | GGCC | 1 cut(s) | 167 |
| BsoBI | CYCGRG | 1 cut(s) | 254 |
| Bsp1286I | GDGCHC | 2 cut(s) | 249, 704 |
| Bsp13I | TCCGGA | 1 cut(s) | 385 |
| Bsp143I | GATC | 4 cut(s) | 379, 506, 619, 627 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 741 |
| BspANI | GGCC | 1 cut(s) | 167 |
| BspCNI | CTCAG | 2 cut(s) | 274, 733 |
| BspEI | TCCGGA | 1 cut(s) | 385 |
| BspLI | GGNNCC | 1 cut(s) | 192 |
| BspT107I | GGYRCC | 1 cut(s) | 190 |
| BspTI | CTTAAG | 1 cut(s) | 485 |
| BssMI | GATC | 4 cut(s) | 379, 506, 619, 627 |
| Bst4CI | ACNGT | 2 cut(s) | 454, 614 |
| Bst6I | CTCTTC | 2 cut(s) | 366, 729 |
| BstAFI | CTTAAG | 1 cut(s) | 485 |
| BstBAI | YACGTR | 1 cut(s) | 338 |
| BstDEI | CTNAG | 2 cut(s) | 282, 741 |
| BstF5I | GGATG | 3 cut(s) | 69, 382, 394 |
| BstHHI | GCGC | 2 cut(s) | 264, 647 |
| BstKTI | GATC | 4 cut(s) | 382, 509, 622, 630 |
| BstMAI | GTCTC | 2 cut(s) | 529, 680 |
| BstMBI | GATC | 4 cut(s) | 379, 506, 619, 627 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 303 |
| BstNSI | RCATGY | 1 cut(s) | 582 |
| BstSCI | CCNGG | 1 cut(s) | 9 |
| BstSLI | GKGCMC | 1 cut(s) | 704 |
| BstV2I | GAAGAC | 1 cut(s) | 615 |
| BsuRI | GGCC | 1 cut(s) | 167 |
| BtgZI | GCGATG | 1 cut(s) | 390 |
| BtsCI | GGATG | 3 cut(s) | 69, 382, 394 |
| BtsIMutI | CAGTG | 1 cut(s) | 75 |
| CfoI | GCGC | 2 cut(s) | 264, 647 |
| CseI | GACGC | 1 cut(s) | 75 |
| Csp6I | GTAC | 3 cut(s) | 93, 191, 339 |
| CviAII | CATG | 6 cut(s) | 87, 163, 434, 579, 659, 706 |
| CviJI | RGCY | 7 cut(s) | 167, 286, 297, 476, 557, 740, 745 |
| CviKI_1 | RGCY | 7 cut(s) | 167, 286, 297, 476, 557, 740, 745 |
| CviQI | GTAC | 3 cut(s) | 93, 191, 339 |
| DdeI | CTNAG | 2 cut(s) | 282, 741 |
| DpnI | GATC | 4 cut(s) | 381, 508, 621, 629 |
| DpnII | GATC | 4 cut(s) | 379, 506, 619, 627 |
| DraI | TTTAAA | 1 cut(s) | 750 |
| EaeI | YGGCCR | 1 cut(s) | 165 |
| Eam1104I | CTCTTC | 2 cut(s) | 366, 729 |
| EarI | CTCTTC | 2 cut(s) | 366, 729 |
| Eco32I | GATATC | 1 cut(s) | 573 |
| Eco57I | CTGAAG | 1 cut(s) | 56 |
| Eco88I | CYCGRG | 1 cut(s) | 254 |
| EcoRV | GATATC | 1 cut(s) | 573 |
| FaeI | CATG | 6 cut(s) | 90, 166, 437, 582, 662, 709 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 522, 554 |
| FatI | CATG | 6 cut(s) | 86, 162, 433, 578, 658, 705 |
| FbaI | TGATCA | 3 cut(s) | 379, 619, 627 |
| FblI | GTMKAC | 1 cut(s) | 399 |
| FokI | GGATG | 3 cut(s) | 56, 369, 401 |
| FspBI | CTAG | 2 cut(s) | 17, 504 |
| FspI | TGCGCA | 1 cut(s) | 646 |
| GlaI | GCGC | 2 cut(s) | 263, 646 |
| HaeIII | GGCC | 1 cut(s) | 167 |
| HapII | CCGG | 2 cut(s) | 10, 386 |
| HgaI | GACGC | 1 cut(s) | 75 |
| HhaI | GCGC | 2 cut(s) | 264, 647 |
| Hin1II | CATG | 6 cut(s) | 90, 166, 437, 582, 662, 709 |
| Hin6I | GCGC | 2 cut(s) | 262, 645 |
| HinP1I | GCGC | 2 cut(s) | 262, 645 |
| HindIII | AAGCTT | 1 cut(s) | 295 |
| HinfI | GANTC | 2 cut(s) | 30, 464 |
| HpaII | CCGG | 2 cut(s) | 10, 386 |
| Hpy166II | GTNNAC | 1 cut(s) | 400 |
| Hpy188I | TCNGA | 2 cut(s) | 29, 148 |
| Hpy188III | TCNNGA | 3 cut(s) | 34, 137, 386 |
| Hpy8I | GTNNAC | 1 cut(s) | 400 |
| HpyCH4III | ACNGT | 2 cut(s) | 454, 614 |
| HpyCH4IV | ACGT | 1 cut(s) | 337 |
| HpyCH4V | TGCA | 4 cut(s) | 101, 500, 526, 605 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 303 |
| HpyF3I | CTNAG | 2 cut(s) | 282, 741 |
| HpySE526I | ACGT | 1 cut(s) | 337 |
| Hsp92II | CATG | 6 cut(s) | 90, 166, 437, 582, 662, 709 |
| HspAI | GCGC | 2 cut(s) | 262, 645 |
| Kpn2I | TCCGGA | 1 cut(s) | 385 |
| KpnI | GGTACC | 1 cut(s) | 194 |
| Ksp22I | TGATCA | 3 cut(s) | 379, 619, 627 |
| Kzo9I | GATC | 4 cut(s) | 379, 506, 619, 627 |
| LmnI | GCTCC | 2 cut(s) | 202, 252 |
| LpnPI | CCDG | 9 cut(s) | 23, 47, 81, 150, 182, 366, 399, 510, 734 |
| LweI | GCATC | 2 cut(s) | 78, 214 |
| MaeI | CTAG | 2 cut(s) | 17, 504 |
| MaeII | ACGT | 1 cut(s) | 337 |
| MaeIII | GTNAC | 3 cut(s) | 277, 355, 692 |
| MalI | GATC | 4 cut(s) | 381, 508, 621, 629 |
| MboI | GATC | 4 cut(s) | 379, 506, 619, 627 |
| MboII | GAAGA | 4 cut(s) | 49, 353, 620, 746 |
| MfeI | CAATTG | 3 cut(s) | 513, 623, 726 |
| MhlI | GDGCHC | 2 cut(s) | 249, 704 |
| MlsI | TGGCCA | 1 cut(s) | 167 |
| MluCI | AATT | 7 cut(s) | 140, 158, 342, 365, 513, 623, 726 |
| MluNI | TGGCCA | 1 cut(s) | 167 |
| MlyI | GAGTC | 1 cut(s) | 24 |
| MmeI | TCCRAC | 2 cut(s) | 52, 663 |
| MnlI | CCTC | 6 cut(s) | 140, 181, 193, 226, 252, 730 |
| Mox20I | TGGCCA | 1 cut(s) | 167 |
| MroI | TCCGGA | 1 cut(s) | 385 |
| MscI | TGGCCA | 1 cut(s) | 167 |
| MseI | TTAA | 3 cut(s) | 486, 749, 757 |
| MslI | CAYNNNNRTG | 3 cut(s) | 269, 387, 657 |
| Msp20I | TGGCCA | 1 cut(s) | 167 |
| MspCI | CTTAAG | 1 cut(s) | 485 |
| MspI | CCGG | 2 cut(s) | 10, 386 |
| MspR9I | CCNGG | 1 cut(s) | 11 |
| MunI | CAATTG | 3 cut(s) | 513, 623, 726 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 303 |
| NciI | CCSGG | 1 cut(s) | 11 |
| NdeII | GATC | 4 cut(s) | 379, 506, 619, 627 |
| NlaIII | CATG | 6 cut(s) | 90, 166, 437, 582, 662, 709 |
| NlaIV | GGNNCC | 1 cut(s) | 192 |
| NmuCI | GTSAC | 1 cut(s) | 692 |
| NsbI | TGCGCA | 1 cut(s) | 646 |
| NspI | RCATGY | 1 cut(s) | 582 |
| PfeI | GAWTC | 1 cut(s) | 464 |
| PleI | GAGTC | 1 cut(s) | 24 |
| PpsI | GAGTC | 1 cut(s) | 24 |
| Ppu21I | YACGTR | 1 cut(s) | 338 |
| PspN4I | GGNNCC | 1 cut(s) | 192 |
| RsaI | GTAC | 3 cut(s) | 94, 192, 340 |
| RsaNI | GTAC | 3 cut(s) | 93, 191, 339 |
| RseI | CAYNNNNRTG | 3 cut(s) | 269, 387, 657 |
| SaqAI | TTAA | 3 cut(s) | 486, 749, 757 |
| Sau3AI | GATC | 4 cut(s) | 379, 506, 619, 627 |
| SchI | GAGTC | 1 cut(s) | 24 |
| ScrFI | CCNGG | 1 cut(s) | 11 |
| SduI | GDGCHC | 2 cut(s) | 249, 704 |
| SfaNI | GCATC | 2 cut(s) | 78, 214 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 269, 387, 657 |
| SmlI | CTYRAG | 1 cut(s) | 485 |
| SmoI | CTYRAG | 1 cut(s) | 485 |
| Sse9I | AATT | 7 cut(s) | 140, 158, 342, 365, 513, 623, 726 |
| SspMI | CTAG | 2 cut(s) | 17, 504 |
| StyD4I | CCNGG | 1 cut(s) | 9 |
| TaaI | ACNGT | 2 cut(s) | 454, 614 |
| TaiI | ACGT | 1 cut(s) | 340 |
| TaqI | TCGA | 4 cut(s) | 21, 179, 208, 712 |
| TasI | AATT | 7 cut(s) | 140, 158, 342, 365, 513, 623, 726 |
| TatI | WGTACW | 1 cut(s) | 92 |
| TfiI | GAWTC | 1 cut(s) | 464 |
| Tru1I | TTAA | 3 cut(s) | 486, 749, 757 |
| Tru9I | TTAA | 3 cut(s) | 486, 749, 757 |
| TscAI | CASTG | 1 cut(s) | 82 |
| TseFI | GTSAC | 1 cut(s) | 692 |
| Tsp45I | GTSAC | 1 cut(s) | 692 |
| TspDTI | ATGAA | 5 cut(s) | 75, 151, 405, 426, 647 |
| TspRI | CASTG | 1 cut(s) | 82 |
| Vha464I | CTTAAG | 1 cut(s) | 485 |
| XapI | RAATTY | 2 cut(s) | 140, 158 |
| XceI | RCATGY | 1 cut(s) | 582 |
| XmiI | GTMKAC | 1 cut(s) | 399 |
| XspI | CTAG | 2 cut(s) | 17, 504 |