RchiOBHm_Chr3g0488491

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0000056
Physical Location & Seq
Reverse (-)
36141842 .. 36144893
3052 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ45284

Sequence Viewer

Length: 417 bp
ATGCGTGTCCCCGAGGAGGAACATCCCAATGCCATCAACAAGTTACTGGAGGTGCTTGACGCCACAGTCTCCACCGAGCTGCCTATTGACGTGGCCATATGGGACATGACTTTTCTATTCGGCAGCGATGCCGTATCTGAAGCCATGGACATGTATAAGCCCAATCTTGTTCCCGCGACAAGGTCATCGATTGAAGCCCTGGAGAGAGTGAACGTCGATCATACGTTGCCTTATGAAGATCCATGTGTTATTTGTTTGGAGGATTTCAGTGTTGATCAAATGGTTATCCACTTGCCCTGTTCGCACTATTATCATGAACATTGCATTGTCCAGTCACTGGAGATCAGTCACATGTGTCCCCTCTGCCGCTACCCAATGCCAACCCTGGTGGAGGAAGTGCCTTCTCAACCCTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

138

Amino Acids

15.69

Weight (kDa)

4.41

Isoelectric Point (pI)

56.29

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 77 - 123 2e-07 RING-H2 zinc finger domain
zf-RING_2 PF13639 82 - 123 3.4e-13 Ring finger domain
zf-RING_11 PF17123 82 - 109 1.8e-09 RING-like zinc finger
zf-C3HC4_2 PF13923 82 - 122 3.5e-06 Zinc finger, C3HC4 type (RING finger)
zf-RING_5 PF14634 82 - 123 2.8e-06 zinc-RING finger domain
zf-RING_UBOX PF13445 82 - 120 4.6e-06 RING-type zinc-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 65
AccB7I CCANNNNNTGG 1 cut(s) 337
AccII CGCG 1 cut(s) 176
AciI CCGC 2 cut(s) 174, 367
AclWI GGATC 1 cut(s) 233
AcoI YGGCCR 1 cut(s) 93
AcuI CTGAAG 1 cut(s) 159
AcyI GRCGYC 1 cut(s) 60
AfiI CCNNNNNNNGG 4 cut(s) 16, 180, 337, 391
AflIII ACRYGT 2 cut(s) 150, 351
AgsI TTSAA 1 cut(s) 194
AjiI CACGTC 1 cut(s) 91
AjnI CCWGG 2 cut(s) 198, 384
AluBI AGCT 1 cut(s) 79
AluI AGCT 1 cut(s) 79
Alw26I GTCTC 1 cut(s) 73
AlwI GGATC 1 cut(s) 233
AlwNI CAGNNNCTG 1 cut(s) 337
Ama87I CYCGRG 1 cut(s) 11
AoxI GGCC 1 cut(s) 93
ApeKI GCWGC 2 cut(s) 79, 123
AvaI CYCGRG 1 cut(s) 11
BalI TGGCCA 1 cut(s) 95
BbvI GCAGC 2 cut(s) 66, 135
BccI CCATC 1 cut(s) 41
BceAI ACGGC 1 cut(s) 116
BciT130I CCWGG 2 cut(s) 200, 386
BclI TGATCA 1 cut(s) 274
BcoDI GTCTC 1 cut(s) 73
BisI GCNGC 3 cut(s) 80, 124, 367
BlsI GCNGC 3 cut(s) 81, 125, 368
Bme1390I CCNGG 2 cut(s) 200, 386
BmeT110I CYCGRG 1 cut(s) 11
BmgBI CACGTC 1 cut(s) 91
BmrFI CCNGG 2 cut(s) 200, 386
BmsI GCATC 1 cut(s) 118
BpmI CTGGAG 3 cut(s) 68, 221, 359
Bsa29I ATCGAT 1 cut(s) 188
BsaHI GRCGYC 1 cut(s) 60
BsaJI CCNNGG 4 cut(s) 12, 144, 198, 384
Bsc4I CCNNNNNNNGG 4 cut(s) 16, 180, 337, 391
Bse1I ACTGG 3 cut(s) 51, 331, 342
Bse3DI GCAATG 1 cut(s) 319
BseBI CCWGG 2 cut(s) 200, 386
BseCI ATCGAT 1 cut(s) 188
BseDI CCNNGG 4 cut(s) 12, 144, 198, 384
BseGI GGATG 1 cut(s) 22
BseLI CCNNNNNNNGG 4 cut(s) 16, 180, 337, 391
BseMI GCAATG 1 cut(s) 319
BseNI ACTGG 3 cut(s) 51, 331, 342
BseRI GAGGAG 1 cut(s) 29
BseXI GCAGC 2 cut(s) 66, 135
Bsh1236I CGCG 1 cut(s) 176
BshFI GGCC 1 cut(s) 95
BshVI ATCGAT 1 cut(s) 188
BsiHKCI CYCGRG 1 cut(s) 11
BslFI GGGAC 2 cut(s) 116, 342
BslI CCNNNNNNNGG 4 cut(s) 16, 180, 337, 391
BsmAI GTCTC 1 cut(s) 73
BsmFI GGGAC 2 cut(s) 116, 342
BsnI GGCC 1 cut(s) 95
BsoBI CYCGRG 1 cut(s) 11
Bsp143I GATC 4 cut(s) 217, 238, 274, 342
Bsp19I CCATGG 1 cut(s) 144
BspACI CCGC 2 cut(s) 174, 367
BspANI GGCC 1 cut(s) 95
BspDI ATCGAT 1 cut(s) 188
BspFNI CGCG 1 cut(s) 176
BspHI TCATGA 1 cut(s) 313
BspPI GGATC 1 cut(s) 233
BsrDI GCAATG 1 cut(s) 319
BsrI ACTGG 3 cut(s) 51, 331, 342
BssECI CCNNGG 4 cut(s) 12, 144, 198, 384
BssMI GATC 4 cut(s) 217, 238, 274, 342
BssNI GRCGYC 1 cut(s) 60
BssT1I CCWWGG 1 cut(s) 144
Bst2UI CCWGG 2 cut(s) 200, 386
Bst4CI ACNGT 1 cut(s) 67
BstACI GRCGYC 1 cut(s) 60
BstDSI CCRYGG 1 cut(s) 144
BstENI CCTNNNNNAGG 1 cut(s) 389
BstF5I GGATG 1 cut(s) 22
BstFNI CGCG 1 cut(s) 176
BstKTI GATC 4 cut(s) 220, 241, 277, 345
BstMAI GTCTC 1 cut(s) 73
BstMBI GATC 4 cut(s) 217, 238, 274, 342
BstMWI GCNNNNNNNGC 1 cut(s) 301
BstNI CCWGG 2 cut(s) 200, 386
BstNSI RCATGY 2 cut(s) 154, 355
BstSCI CCNGG 2 cut(s) 198, 384
BstUI CGCG 1 cut(s) 176
BstV1I GCAGC 2 cut(s) 66, 135
BstX2I RGATCY 1 cut(s) 238
BstYI RGATCY 1 cut(s) 238
Bsu15I ATCGAT 1 cut(s) 188
BsuRI GGCC 1 cut(s) 95
BsuTUI ATCGAT 1 cut(s) 188
BtgI CCRYGG 1 cut(s) 144
BtgZI GCGATG 1 cut(s) 141
BtrI CACGTC 1 cut(s) 91
BtsCI GGATG 1 cut(s) 22
BtsIMutI CAGTG 2 cut(s) 274, 335
CaiI CAGNNNCTG 1 cut(s) 337
CciI TCATGA 1 cut(s) 313
ClaI ATCGAT 1 cut(s) 188
CseI GACGC 1 cut(s) 68
CspCI CAANNNNNGTGG 2 cut(s) 369, 404
CviAII CATG 6 cut(s) 106, 145, 151, 243, 314, 352
CviJI RGCY 5 cut(s) 79, 95, 143, 160, 197
CviKI_1 RGCY 5 cut(s) 79, 95, 143, 160, 197
DpnI GATC 4 cut(s) 219, 240, 276, 344
DpnII GATC 4 cut(s) 217, 238, 274, 342
DrdI GACNNNNNNGTC 1 cut(s) 65
DseDI GACNNNNNNGTC 1 cut(s) 65
EaeI YGGCCR 1 cut(s) 93
Eco130I CCWWGG 1 cut(s) 144
Eco57I CTGAAG 1 cut(s) 159
Eco88I CYCGRG 1 cut(s) 11
EcoNI CCTNNNNNAGG 1 cut(s) 389
EcoRII CCWGG 2 cut(s) 198, 384
EcoT14I CCWWGG 1 cut(s) 144
ErhI CCWWGG 1 cut(s) 144
FaeI CATG 6 cut(s) 109, 148, 154, 246, 317, 355
FaqI GGGAC 2 cut(s) 116, 342
FatI CATG 6 cut(s) 105, 144, 150, 242, 313, 351
FauI CCCGC 1 cut(s) 181
FauNDI CATATG 1 cut(s) 98
FbaI TGATCA 1 cut(s) 274
Fnu4HI GCNGC 3 cut(s) 80, 124, 367
FokI GGATG 1 cut(s) 9
Fsp4HI GCNGC 3 cut(s) 80, 124, 367
GluI GCNGC 3 cut(s) 80, 124, 367
GsuI CTGGAG 3 cut(s) 68, 221, 359
HaeIII GGCC 1 cut(s) 95
HgaI GACGC 1 cut(s) 68
Hin1I GRCGYC 1 cut(s) 60
Hin1II CATG 6 cut(s) 109, 148, 154, 246, 317, 355
Hpy166II GTNNAC 1 cut(s) 211
Hpy188I TCNGA 1 cut(s) 139
Hpy188III TCNNGA 1 cut(s) 314
Hpy8I GTNNAC 1 cut(s) 211
Hpy99I CGWCG 1 cut(s) 218
HpyAV CCTTC 1 cut(s) 411
HpyCH4III ACNGT 1 cut(s) 67
HpyCH4IV ACGT 3 cut(s) 90, 213, 224
HpyCH4V TGCA 1 cut(s) 324
HpyF10VI GCNNNNNNNGC 1 cut(s) 301
HpySE526I ACGT 3 cut(s) 90, 213, 224
Hsp92I GRCGYC 1 cut(s) 60
Hsp92II CATG 6 cut(s) 109, 148, 154, 246, 317, 355
Ksp22I TGATCA 1 cut(s) 274
Kzo9I GATC 4 cut(s) 217, 238, 274, 342
LpnPI CCDG 8 cut(s) 32, 185, 212, 310, 323, 344, 371, 398
Lsp1109I GCAGC 2 cut(s) 66, 135
LweI GCATC 1 cut(s) 118
MaeII ACGT 3 cut(s) 90, 213, 224
MaeIII GTNAC 3 cut(s) 42, 333, 347
MalI GATC 4 cut(s) 219, 240, 276, 344
MboI GATC 4 cut(s) 217, 238, 274, 342
MboII GAAGA 1 cut(s) 248
MflI RGATCY 1 cut(s) 238
MlsI TGGCCA 1 cut(s) 95
MluNI TGGCCA 1 cut(s) 95
MnlI CCTC 6 cut(s) 7, 10, 43, 253, 371, 385
Mox20I TGGCCA 1 cut(s) 95
MscI TGGCCA 1 cut(s) 95
MslI CAYNNNNRTG 2 cut(s) 27, 149
Msp20I TGGCCA 1 cut(s) 95
MspR9I CCNGG 2 cut(s) 200, 386
MvaI CCWGG 2 cut(s) 200, 386
MvnI CGCG 1 cut(s) 176
MwoI GCNNNNNNNGC 1 cut(s) 301
NcoI CCATGG 1 cut(s) 144
NdeI CATATG 1 cut(s) 98
NdeII GATC 4 cut(s) 217, 238, 274, 342
NlaIII CATG 6 cut(s) 109, 148, 154, 246, 317, 355
NmuCI GTSAC 2 cut(s) 333, 347
NspI RCATGY 2 cut(s) 154, 355
PagI TCATGA 1 cut(s) 313
PciI ACATGT 2 cut(s) 150, 351
PflFI GACNNNGTC 1 cut(s) 181
PflMI CCANNNNNTGG 1 cut(s) 337
PkrI GCNGC 3 cut(s) 81, 125, 368
PscI ACATGT 2 cut(s) 150, 351
Psp6I CCWGG 2 cut(s) 198, 384
PspGI CCWGG 2 cut(s) 198, 384
PstNI CAGNNNCTG 1 cut(s) 337
PsuI RGATCY 1 cut(s) 238
PsyI GACNNNGTC 1 cut(s) 181
RseI CAYNNNNRTG 2 cut(s) 27, 149
SatI GCNGC 3 cut(s) 80, 124, 367
Sau3AI GATC 4 cut(s) 217, 238, 274, 342
ScrFI CCNGG 2 cut(s) 200, 386
SetI ASST 6 cut(s) 54, 81, 93, 185, 216, 227
SfaNI GCATC 1 cut(s) 118
SmiMI CAYNNNNRTG 2 cut(s) 27, 149
SsiI CCGC 2 cut(s) 174, 367
StyD4I CCNGG 2 cut(s) 198, 384
StyI CCWWGG 1 cut(s) 144
TaaI ACNGT 1 cut(s) 67
TaiI ACGT 3 cut(s) 93, 216, 227
TaqI TCGA 2 cut(s) 188, 216
TauI GCSGC 1 cut(s) 369
TscAI CASTG 2 cut(s) 274, 342
TseFI GTSAC 2 cut(s) 333, 347
TseI GCWGC 2 cut(s) 79, 123
Tsp45I GTSAC 2 cut(s) 333, 347
TspDTI ATGAA 2 cut(s) 249, 330
TspRI CASTG 2 cut(s) 274, 342
Tth111I GACNNNGTC 1 cut(s) 181
Van91I CCANNNNNTGG 1 cut(s) 337
XagI CCTNNNNNAGG 1 cut(s) 389
XceI RCATGY 2 cut(s) 154, 355
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.