ubiquitin-protein transferase activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 271 |
| AciI | CCGC | 2 cut(s) | 123, 446 |
| AclWI | GGATC | 1 cut(s) | 456 |
| AcsI | RAATTY | 4 cut(s) | 145, 224, 379, 415 |
| AfaI | GTAC | 1 cut(s) | 288 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 237 |
| AflIII | ACRYGT | 2 cut(s) | 203, 321 |
| AgsI | TTSAA | 5 cut(s) | 98, 112, 302, 378, 434 |
| AluBI | AGCT | 1 cut(s) | 313 |
| AluI | AGCT | 1 cut(s) | 313 |
| Alw26I | GTCTC | 1 cut(s) | 154 |
| AlwI | GGATC | 1 cut(s) | 456 |
| ApoI | RAATTY | 4 cut(s) | 145, 224, 379, 415 |
| AseI | ATTAAT | 1 cut(s) | 465 |
| AspLEI | GCGC | 1 cut(s) | 272 |
| AsuHPI | GGTGA | 2 cut(s) | 416, 452 |
| BaeGI | GKGCMC | 1 cut(s) | 329 |
| BanII | GRGCYC | 1 cut(s) | 200 |
| BccI | CCATC | 1 cut(s) | 418 |
| BclI | TGATCA | 1 cut(s) | 244 |
| BcoDI | GTCTC | 1 cut(s) | 154 |
| BfaI | CTAG | 1 cut(s) | 129 |
| BmrI | ACTGGG | 1 cut(s) | 384 |
| BmuI | ACTGGG | 1 cut(s) | 384 |
| BpmI | CTGGAG | 1 cut(s) | 329 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 237 |
| Bse1I | ACTGG | 1 cut(s) | 390 |
| Bse3DI | GCAATG | 3 cut(s) | 35, 260, 289 |
| BseGI | GGATG | 2 cut(s) | 226, 403 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 237 |
| BseMI | GCAATG | 3 cut(s) | 35, 260, 289 |
| BseMII | CTCAG | 2 cut(s) | 93, 305 |
| BseNI | ACTGG | 1 cut(s) | 390 |
| BseSI | GKGCMC | 1 cut(s) | 329 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 237 |
| BsmAI | GTCTC | 1 cut(s) | 154 |
| BsmI | GAATGC | 1 cut(s) | 37 |
| Bsp1286I | GDGCHC | 2 cut(s) | 200, 329 |
| Bsp1407I | TGTACA | 1 cut(s) | 286 |
| Bsp143I | GATC | 3 cut(s) | 131, 244, 448 |
| BspACI | CCGC | 2 cut(s) | 123, 446 |
| BspCNI | CTCAG | 2 cut(s) | 94, 306 |
| BspHI | TCATGA | 2 cut(s) | 55, 451 |
| BspPI | GGATC | 1 cut(s) | 456 |
| BsrDI | GCAATG | 3 cut(s) | 35, 260, 289 |
| BsrGI | TGTACA | 1 cut(s) | 286 |
| BsrI | ACTGG | 1 cut(s) | 390 |
| BssMI | GATC | 3 cut(s) | 131, 244, 448 |
| Bst4CI | ACNGT | 1 cut(s) | 22 |
| Bst6I | CTCTTC | 3 cut(s) | 171, 354, 429 |
| BstAUI | TGTACA | 1 cut(s) | 286 |
| BstC8I | GCNNGC | 1 cut(s) | 371 |
| BstDEI | CTNAG | 2 cut(s) | 102, 314 |
| BstF5I | GGATG | 2 cut(s) | 226, 403 |
| BstHHI | GCGC | 1 cut(s) | 272 |
| BstKTI | GATC | 3 cut(s) | 134, 247, 451 |
| BstMAI | GTCTC | 1 cut(s) | 154 |
| BstMBI | GATC | 3 cut(s) | 131, 244, 448 |
| BstNSI | RCATGY | 2 cut(s) | 207, 325 |
| BstSLI | GKGCMC | 1 cut(s) | 329 |
| BtsCI | GGATG | 2 cut(s) | 226, 403 |
| BtsIMutI | CAGTG | 1 cut(s) | 27 |
| Cac8I | GCNNGC | 1 cut(s) | 371 |
| CciI | TCATGA | 2 cut(s) | 55, 451 |
| CfoI | GCGC | 1 cut(s) | 272 |
| CseI | GACGC | 1 cut(s) | 323 |
| Csp6I | GTAC | 1 cut(s) | 287 |
| CviAII | CATG | 5 cut(s) | 56, 204, 284, 322, 452 |
| CviJI | RGCY | 9 cut(s) | 28, 79, 182, 198, 307, 313, 373, 409, 479 |
| CviKI_1 | RGCY | 9 cut(s) | 28, 79, 182, 198, 307, 313, 373, 409, 479 |
| CviQI | GTAC | 1 cut(s) | 287 |
| DdeI | CTNAG | 2 cut(s) | 102, 314 |
| DpnI | GATC | 3 cut(s) | 133, 246, 450 |
| DpnII | GATC | 3 cut(s) | 131, 244, 448 |
| Eam1104I | CTCTTC | 3 cut(s) | 171, 354, 429 |
| EarI | CTCTTC | 3 cut(s) | 171, 354, 429 |
| EciI | GGCGGA | 1 cut(s) | 461 |
| Eco24I | GRGCYC | 1 cut(s) | 200 |
| EcoT22I | ATGCAT | 1 cut(s) | 37 |
| EcoT38I | GRGCYC | 1 cut(s) | 200 |
| FaeI | CATG | 5 cut(s) | 59, 207, 287, 325, 455 |
| FaiI | YATR | 8 cut(s) | 57, 83, 205, 212, 214, 285, 323, 453 |
| FatI | CATG | 5 cut(s) | 55, 203, 283, 321, 451 |
| FauI | CCCGC | 1 cut(s) | 130 |
| FbaI | TGATCA | 1 cut(s) | 244 |
| FokI | GGATG | 2 cut(s) | 233, 410 |
| FriOI | GRGCYC | 1 cut(s) | 200 |
| FspBI | CTAG | 1 cut(s) | 129 |
| FspI | TGCGCA | 1 cut(s) | 271 |
| GlaI | GCGC | 1 cut(s) | 271 |
| GsuI | CTGGAG | 1 cut(s) | 329 |
| HgaI | GACGC | 1 cut(s) | 323 |
| HhaI | GCGC | 1 cut(s) | 272 |
| Hin1II | CATG | 5 cut(s) | 59, 207, 287, 325, 455 |
| Hin6I | GCGC | 1 cut(s) | 270 |
| HinP1I | GCGC | 1 cut(s) | 270 |
| HincII | GTYRAC | 1 cut(s) | 49 |
| HindII | GTYRAC | 1 cut(s) | 49 |
| HinfI | GANTC | 2 cut(s) | 89, 316 |
| HphI | GGTGA | 2 cut(s) | 416, 452 |
| Hpy166II | GTNNAC | 1 cut(s) | 49 |
| Hpy188I | TCNGA | 1 cut(s) | 472 |
| Hpy188III | TCNNGA | 2 cut(s) | 56, 452 |
| Hpy8I | GTNNAC | 1 cut(s) | 49 |
| Hpy99I | CGWCG | 1 cut(s) | 339 |
| HpyAV | CCTTC | 1 cut(s) | 384 |
| HpyCH4III | ACNGT | 1 cut(s) | 22 |
| HpyCH4V | TGCA | 3 cut(s) | 35, 151, 294 |
| HpyF3I | CTNAG | 2 cut(s) | 102, 314 |
| Hsp92II | CATG | 5 cut(s) | 59, 207, 287, 325, 455 |
| HspAI | GCGC | 1 cut(s) | 270 |
| Ksp22I | TGATCA | 1 cut(s) | 244 |
| Kzo9I | GATC | 3 cut(s) | 131, 244, 448 |
| LmnI | GCTCC | 1 cut(s) | 310 |
| LpnPI | CCDG | 5 cut(s) | 223, 293, 359, 403, 443 |
| MaeI | CTAG | 1 cut(s) | 129 |
| MaeIII | GTNAC | 1 cut(s) | 317 |
| MalI | GATC | 3 cut(s) | 133, 246, 450 |
| MboI | GATC | 3 cut(s) | 131, 244, 448 |
| MboII | GAAGA | 4 cut(s) | 188, 371, 446, 485 |
| MhlI | GDGCHC | 2 cut(s) | 200, 329 |
| MluCI | AATT | 5 cut(s) | 145, 224, 379, 415, 466 |
| MlyI | GAGTC | 2 cut(s) | 98, 325 |
| MnlI | CCTC | 5 cut(s) | 172, 355, 394, 430, 436 |
| Mph1103I | ATGCAT | 1 cut(s) | 37 |
| MseI | TTAA | 1 cut(s) | 465 |
| MslI | CAYNNNNRTG | 1 cut(s) | 282 |
| Mva1269I | GAATGC | 1 cut(s) | 37 |
| NdeII | GATC | 3 cut(s) | 131, 244, 448 |
| NlaIII | CATG | 5 cut(s) | 59, 207, 287, 325, 455 |
| NmeAIII | GCCGAG | 1 cut(s) | 450 |
| NmuCI | GTSAC | 1 cut(s) | 317 |
| NsbI | TGCGCA | 1 cut(s) | 271 |
| NsiI | ATGCAT | 1 cut(s) | 37 |
| NspI | RCATGY | 2 cut(s) | 207, 325 |
| PagI | TCATGA | 2 cut(s) | 55, 451 |
| PciI | ACATGT | 2 cut(s) | 203, 321 |
| PctI | GAATGC | 1 cut(s) | 37 |
| PleI | GAGTC | 2 cut(s) | 97, 324 |
| PpsI | GAGTC | 2 cut(s) | 97, 324 |
| PscI | ACATGT | 2 cut(s) | 203, 321 |
| PshBI | ATTAAT | 1 cut(s) | 465 |
| RsaI | GTAC | 1 cut(s) | 288 |
| RsaNI | GTAC | 1 cut(s) | 287 |
| RseI | CAYNNNNRTG | 1 cut(s) | 282 |
| SaqAI | TTAA | 1 cut(s) | 465 |
| Sau3AI | GATC | 3 cut(s) | 131, 244, 448 |
| SchI | GAGTC | 2 cut(s) | 98, 325 |
| SduI | GDGCHC | 2 cut(s) | 200, 329 |
| SetI | ASST | 1 cut(s) | 315 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 282 |
| Sse9I | AATT | 5 cut(s) | 145, 224, 379, 415, 466 |
| SsiI | CCGC | 2 cut(s) | 123, 446 |
| SspMI | CTAG | 1 cut(s) | 129 |
| TaaI | ACNGT | 1 cut(s) | 22 |
| TaqI | TCGA | 1 cut(s) | 337 |
| TasI | AATT | 5 cut(s) | 145, 224, 379, 415, 466 |
| TatI | WGTACW | 1 cut(s) | 286 |
| Tru1I | TTAA | 1 cut(s) | 465 |
| Tru9I | TTAA | 1 cut(s) | 465 |
| TscAI | CASTG | 1 cut(s) | 27 |
| TseFI | GTSAC | 1 cut(s) | 317 |
| Tsp45I | GTSAC | 1 cut(s) | 317 |
| TspDTI | ATGAA | 1 cut(s) | 237 |
| TspRI | CASTG | 1 cut(s) | 27 |
| VspI | ATTAAT | 1 cut(s) | 465 |
| XapI | RAATTY | 4 cut(s) | 145, 224, 379, 415 |
| XceI | RCATGY | 2 cut(s) | 207, 325 |
| XspI | CTAG | 1 cut(s) | 129 |
| Zsp2I | ATGCAT | 1 cut(s) | 37 |