FvH4_6g50581

ubiquitin-protein transferase activity

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
37629335 .. 37630258
924 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g50581.t1

Sequence Viewer

Length: 924 bp
ATGGGAATGCCACAAGAGGAGCAGCCAACTATCCTGGAGAAACTGTTTCAAGTGGTTGAAGTGGCCATCCCCATGCGTCGCGTCTTTGTTTTGGTAGCTGATGTGACTGTGCGCTTATTGGGAAGTTTTGATGATCAGGACACCATCGATAGACTTACAAGGGAACATCCCATTTCAAAACAATTTGAGTTTGTTCACGAGTTGGGCATTGAGGAAACCTATGGATTGAGTGAGGCTGATTATCATGATATCCATGATATGGTTACATGGGAATCCTTTCAAACTCATAGGGGAAAGTTTATTCCTGCATTTAGCTTGGAGAAAGTGAGACTTGGTAGTTTGGAAGAAGCTACTATCAAACTTTATCCAACATGTGTTATTTGTATGGATGACTTCGCAGATGGAAGTGCCGATCAGCTGGTTATTCGTTTGCCCTGTGCAAACCTTTTTCATGCACACTGCATTTCCCAATGGCTAGAGGTGAATCGCGTGTGCCCCCTTTGTCGATATGCAATAACAAAAGAGGTTGATATCGAACCCTCAGAAATTATCACTGAAAATGTTGAGCCACCTGTGCACGAAGCTAATTTTGAGCCGCAAGTACCTGATCAACAACAGCTCGCAAATGAAGTCCTAGTGCCAACCCAAGAATCAAACTTTCAAGCTTCGAACTTGAACAATGTCCATGACAATACTGACAACCTCAATGCTAATGTGAACCTAAATGTCAATTTCTCATTCAATGTTGAATCTCAAGATGAGGGTGAGGCCATTGGACTTTCTCAAGACAATGAATTTGTGCTGGAACCAAATATTCATGTAAAGCACATAACGGATCACTTGACGAAGATGTTAACAACGTGTACGGAAACGATGACGGGTTTATTATTTCGTGTATTAATAATGTGTTGTTCAAAAAGTTAA

Protein Analysis

308

Amino Acids

34.89

Weight (kDa)

4.57

Isoelectric Point (pI)

39.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 124 - 169 5e-13 Ring finger domain
zf-C3HC4_2 PF13923 125 - 168 2.5e-06 Zinc finger, C3HC4 type (RING finger)
zf-rbx1 PF12678 140 - 169 2e-07 RING-H2 zinc finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 259
AccII CGCG 2 cut(s) 81, 489
AciI CCGC 1 cut(s) 596
AclWI GGATC 1 cut(s) 843
AcoI YGGCCR 1 cut(s) 63
AcsI RAATTY 1 cut(s) 794
AfaI GTAC 2 cut(s) 603, 865
AfiI CCNNNNNNNGG 1 cut(s) 259
AflIII ACRYGT 2 cut(s) 371, 860
AgsI TTSAA 9 cut(s) 50, 59, 177, 281, 662, 676, 742, 749, 915
AjnI CCWGG 1 cut(s) 33
AluBI AGCT 7 cut(s) 98, 315, 350, 418, 584, 619, 665
AluI AGCT 7 cut(s) 98, 315, 350, 418, 584, 619, 665
Alw21I GWGCWC 1 cut(s) 579
Alw26I GTCTC 1 cut(s) 322
Alw44I GTGCAC 1 cut(s) 575
AlwI GGATC 1 cut(s) 843
AoxI GGCC 2 cut(s) 63, 768
ApaLI GTGCAC 1 cut(s) 575
ApeKI GCWGC 1 cut(s) 22
ApoI RAATTY 1 cut(s) 794
ArsI GACNNNNNNTTYG 2 cut(s) 779, 811
AseI ATTAAT 1 cut(s) 899
Asp700I GAANNNNTTC 1 cut(s) 276
AspLEI GCGC 1 cut(s) 114
AsuHPI GGTGA 2 cut(s) 493, 776
AsuII TTCGAA 1 cut(s) 668
BaeGI GKGCMC 2 cut(s) 497, 579
BalI TGGCCA 1 cut(s) 65
BauI CACGAG 1 cut(s) 197
Bbv12I GWGCWC 1 cut(s) 579
BbvI GCAGC 1 cut(s) 34
BccI CCATC 3 cut(s) 74, 152, 395
BciT130I CCWGG 1 cut(s) 35
BclI TGATCA 2 cut(s) 133, 607
BcoDI GTCTC 1 cut(s) 322
BfaI CTAG 2 cut(s) 476, 635
BisI GCNGC 2 cut(s) 23, 596
BlsI GCNGC 2 cut(s) 24, 597
Bme1390I CCNGG 1 cut(s) 35
BmiI GGNNCC 1 cut(s) 807
BmrFI CCNGG 1 cut(s) 35
BpmI CTGGAG 1 cut(s) 56
Bpu14I TTCGAA 1 cut(s) 668
BpuEI CTTGAG 2 cut(s) 738, 768
Bsa29I ATCGAT 1 cut(s) 147
BsaXI ACNNNNNCTCC 2 cut(s) 29, 59
Bsc4I CCNNNNNNNGG 1 cut(s) 259
BseBI CCWGG 1 cut(s) 35
BseCI ATCGAT 1 cut(s) 147
BseGI GGATG 3 cut(s) 66, 166, 394
BseLI CCNNNNNNNGG 1 cut(s) 259
BseMII CTCAG 1 cut(s) 555
BseRI GAGGAG 1 cut(s) 32
BseSI GKGCMC 2 cut(s) 497, 579
BseXI GCAGC 1 cut(s) 34
Bsh1236I CGCG 2 cut(s) 81, 489
BshFI GGCC 2 cut(s) 65, 770
BshVI ATCGAT 1 cut(s) 147
BsiHKAI GWGCWC 1 cut(s) 579
BslI CCNNNNNNNGG 1 cut(s) 259
BsmAI GTCTC 1 cut(s) 322
BsmI GAATGC 1 cut(s) 12
BsnI GGCC 2 cut(s) 65, 770
Bsp119I TTCGAA 1 cut(s) 668
Bsp1286I GDGCHC 2 cut(s) 497, 579
Bsp143I GATC 4 cut(s) 133, 412, 607, 835
BspACI CCGC 1 cut(s) 596
BspANI GGCC 2 cut(s) 65, 770
BspCNI CTCAG 1 cut(s) 554
BspDI ATCGAT 1 cut(s) 147
BspFNI CGCG 2 cut(s) 81, 489
BspHI TCATGA 1 cut(s) 244
BspLI GGNNCC 1 cut(s) 807
BspPI GGATC 1 cut(s) 843
BspT104I TTCGAA 1 cut(s) 668
BssMI GATC 4 cut(s) 133, 412, 607, 835
BssSI CACGAG 1 cut(s) 197
Bst2BI CACGAG 1 cut(s) 197
Bst2UI CCWGG 1 cut(s) 35
Bst4CI ACNGT 2 cut(s) 45, 109
BstBI TTCGAA 1 cut(s) 668
BstC8I GCNNGC 1 cut(s) 621
BstDEI CTNAG 1 cut(s) 541
BstF5I GGATG 3 cut(s) 66, 166, 394
BstFNI CGCG 2 cut(s) 81, 489
BstHHI GCGC 1 cut(s) 114
BstKTI GATC 4 cut(s) 136, 415, 610, 838
BstMAI GTCTC 1 cut(s) 322
BstMBI GATC 4 cut(s) 133, 412, 607, 835
BstMWI GCNNNNNNNGC 1 cut(s) 574
BstNI CCWGG 1 cut(s) 35
BstNSI RCATGY 1 cut(s) 375
BstSCI CCNGG 1 cut(s) 33
BstSLI GKGCMC 2 cut(s) 497, 579
BstUI CGCG 2 cut(s) 81, 489
BstV1I GCAGC 1 cut(s) 34
Bsu15I ATCGAT 1 cut(s) 147
BsuRI GGCC 2 cut(s) 65, 770
BsuTUI ATCGAT 1 cut(s) 147
BtsCI GGATG 3 cut(s) 66, 166, 394
BtsI GCAGTG 1 cut(s) 457
BtsIMutI CAGTG 2 cut(s) 457, 552
Cac8I GCNNGC 1 cut(s) 621
CciI TCATGA 1 cut(s) 244
CfoI GCGC 1 cut(s) 114
ClaI ATCGAT 1 cut(s) 147
CseI GACGC 2 cut(s) 65, 70
Csp6I GTAC 2 cut(s) 602, 864
CviAII CATG 8 cut(s) 73, 245, 254, 267, 372, 452, 686, 818
CviQI GTAC 2 cut(s) 602, 864
DdeI CTNAG 1 cut(s) 541
DpnI GATC 4 cut(s) 135, 414, 609, 837
DpnII GATC 4 cut(s) 133, 412, 607, 835
EaeI YGGCCR 1 cut(s) 63
Eco32I GATATC 2 cut(s) 250, 532
EcoRII CCWGG 1 cut(s) 33
EcoRV GATATC 2 cut(s) 250, 532
FaeI CATG 8 cut(s) 76, 248, 257, 270, 375, 455, 689, 821
FalI AAGNNNNNCTT 2 cut(s) 315, 347
FatI CATG 8 cut(s) 72, 244, 253, 266, 371, 451, 685, 817
FbaI TGATCA 2 cut(s) 133, 607
Fnu4HI GCNGC 2 cut(s) 23, 596
FokI GGATG 3 cut(s) 53, 153, 401
Fsp4HI GCNGC 2 cut(s) 23, 596
FspBI CTAG 2 cut(s) 476, 635
GlaI GCGC 1 cut(s) 113
GluI GCNGC 2 cut(s) 23, 596
GsuI CTGGAG 1 cut(s) 56
HaeIII GGCC 2 cut(s) 65, 770
HgaI GACGC 2 cut(s) 65, 70
HhaI GCGC 1 cut(s) 114
Hin1II CATG 8 cut(s) 76, 248, 257, 270, 375, 455, 689, 821
Hin6I GCGC 1 cut(s) 112
HinP1I GCGC 1 cut(s) 112
HincII GTYRAC 1 cut(s) 855
HindII GTYRAC 1 cut(s) 855
HindIII AAGCTT 1 cut(s) 663
HinfI GANTC 4 cut(s) 272, 484, 650, 749
HpaI GTTAAC 1 cut(s) 855
HphI GGTGA 2 cut(s) 493, 776
Hpy166II GTNNAC 5 cut(s) 196, 577, 718, 855, 864
Hpy188I TCNGA 1 cut(s) 544
Hpy188III TCNNGA 5 cut(s) 137, 197, 245, 755, 785
Hpy8I GTNNAC 5 cut(s) 196, 577, 718, 855, 864
Hpy99I CGWCG 1 cut(s) 81
HpyCH4III ACNGT 2 cut(s) 45, 109
HpyCH4IV ACGT 1 cut(s) 860
HpyCH4V TGCA 6 cut(s) 308, 440, 455, 462, 512, 577
HpyF10VI GCNNNNNNNGC 1 cut(s) 574
HpyF3I CTNAG 1 cut(s) 541
HpySE526I ACGT 1 cut(s) 860
Hsp92II CATG 8 cut(s) 76, 248, 257, 270, 375, 455, 689, 821
HspAI GCGC 1 cut(s) 112
Ksp22I TGATCA 2 cut(s) 133, 607
KspAI GTTAAC 1 cut(s) 855
Kzo9I GATC 4 cut(s) 133, 412, 607, 835
LmnI GCTCC 1 cut(s) 19
LpnPI CCDG 9 cut(s) 20, 47, 122, 318, 404, 448, 585, 618, 788
Lsp1109I GCAGC 1 cut(s) 34
MaeI CTAG 2 cut(s) 476, 635
MaeII ACGT 1 cut(s) 860
MaeIII GTNAC 2 cut(s) 103, 262
MalI GATC 4 cut(s) 135, 414, 609, 837
MboI GATC 4 cut(s) 133, 412, 607, 835
MboII GAAGA 2 cut(s) 356, 859
MhlI GDGCHC 2 cut(s) 497, 579
MlsI TGGCCA 1 cut(s) 65
MluCI AATT 5 cut(s) 182, 546, 586, 730, 794
MluNI TGGCCA 1 cut(s) 65
MmeI TCCRAC 1 cut(s) 392
MnlI CCTC 9 cut(s) 10, 205, 226, 472, 517, 550, 713, 754, 760
Mox20I TGGCCA 1 cut(s) 65
MroXI GAANNNNTTC 1 cut(s) 276
MscI TGGCCA 1 cut(s) 65
MseI TTAA 3 cut(s) 854, 899, 922
MslI CAYNNNNRTG 1 cut(s) 71
Msp20I TGGCCA 1 cut(s) 65
MspA1I CMGCKG 1 cut(s) 418
MspR9I CCNGG 1 cut(s) 35
Mva1269I GAATGC 1 cut(s) 12
MvaI CCWGG 1 cut(s) 35
MvnI CGCG 2 cut(s) 81, 489
MwoI GCNNNNNNNGC 1 cut(s) 574
NdeII GATC 4 cut(s) 133, 412, 607, 835
NlaIII CATG 8 cut(s) 76, 248, 257, 270, 375, 455, 689, 821
NlaIV GGNNCC 1 cut(s) 807
NmuCI GTSAC 1 cut(s) 103
NspI RCATGY 1 cut(s) 375
NspV TTCGAA 1 cut(s) 668
PagI TCATGA 1 cut(s) 244
PciI ACATGT 1 cut(s) 371
PctI GAATGC 1 cut(s) 12
PdmI GAANNNNTTC 1 cut(s) 276
PfeI GAWTC 4 cut(s) 272, 484, 650, 749
PflMI CCANNNNNTGG 1 cut(s) 259
PfoI TCCNGGA 1 cut(s) 33
PkrI GCNGC 2 cut(s) 24, 597
PscI ACATGT 1 cut(s) 371
PshBI ATTAAT 1 cut(s) 899
Psp6I CCWGG 1 cut(s) 33
PspGI CCWGG 1 cut(s) 33
PspN4I GGNNCC 1 cut(s) 807
PvuII CAGCTG 1 cut(s) 418
RsaI GTAC 2 cut(s) 603, 865
RsaNI GTAC 2 cut(s) 602, 864
RseI CAYNNNNRTG 1 cut(s) 71
SaqAI TTAA 3 cut(s) 854, 899, 922
SatI GCNGC 2 cut(s) 23, 596
Sau3AI GATC 4 cut(s) 133, 412, 607, 835
ScrFI CCNGG 1 cut(s) 35
SduI GDGCHC 2 cut(s) 497, 579
SfuI TTCGAA 1 cut(s) 668
SmiMI CAYNNNNRTG 1 cut(s) 71
SmlI CTYRAG 2 cut(s) 753, 783
SmoI CTYRAG 2 cut(s) 753, 783
Sse9I AATT 5 cut(s) 182, 546, 586, 730, 794
SsiI CCGC 1 cut(s) 596
SspI AATATT 1 cut(s) 814
SspMI CTAG 2 cut(s) 476, 635
StyD4I CCNGG 1 cut(s) 33
TaaI ACNGT 2 cut(s) 45, 109
TaiI ACGT 1 cut(s) 863
TaqI TCGA 4 cut(s) 147, 505, 534, 668
TasI AATT 5 cut(s) 182, 546, 586, 730, 794
TauI GCSGC 1 cut(s) 598
TfiI GAWTC 4 cut(s) 272, 484, 650, 749
Tru1I TTAA 3 cut(s) 854, 899, 922
Tru9I TTAA 3 cut(s) 854, 899, 922
TscAI CASTG 2 cut(s) 464, 559
TseFI GTSAC 1 cut(s) 103
TseI GCWGC 1 cut(s) 22
Tsp45I GTSAC 1 cut(s) 103
TspDTI ATGAA 4 cut(s) 440, 642, 806, 807
TspGWI ACGGA 2 cut(s) 848, 881
TspRI CASTG 2 cut(s) 464, 559
Van91I CCANNNNNTGG 1 cut(s) 259
VneI GTGCAC 1 cut(s) 575
VspI ATTAAT 1 cut(s) 899
XapI RAATTY 1 cut(s) 794
XceI RCATGY 1 cut(s) 375
XmnI GAANNNNTTC 1 cut(s) 276
XspI CTAG 2 cut(s) 476, 635
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.