FvH4_6g15110

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000056
Physical Location & Seq
Forward (+)
9382843 .. 9384602
1760 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g15110.t1

Sequence Viewer

Length: 831 bp
ATGCCTGTGGAGGACGCTTTCTTCAGTATCTCTGTGTATCAGACAGACATAGTTCCAGTCGAGCGGCCGGACAACTTGGTGAGAAAGAATATCTTCCAGTTATTGTCAAGATTGGCAAGTCATGCTACAGCCATCGTTCGCTGTCCGATATTCCCTCCATGTGGACGTGGCCTAGTACAACGTTATGAGTCACATTTCAGAAAGATGATCAAGGGCGATTTTTCGGGTTTTTGGGGAACAAGTCTCCCTGAAACTGTATATGAAGAGATTCTGTACAAGTTGTTCCCGGCGATTTACGCCACCGAGTGCTACCAGGTGCCTCTTGTTGTAGTCGTTACCGACGACACTTACCAGAGGGAGAGTGATGAGGTCTTGAGTTTCACTCCTACAGCTCATTCTGCCATCGAGGGTTTGGAGAAAGTGCGAATTGATGCTGCCATTATTGATGGAGAATCATCACCCATGTGTGCTATATGTTGGAAGGATTTCACACCGGAAGAAGGGATGCTTACTCGCATGCCCTGCTCACACTGTTATCATGGAGATTGCATTGTGTGCTGGCTGAGCGTTAATCAGCTTTGTCCAATGTGCCGATACCCGATGCCGGTGGCGACCCAGCTGCCACCATCAGCATACAATCCTCTGAAGCGTCTTAATATATTGGTAAGGAGGGAGAGTAGGTCGCCTTTATATTATGCTGCTGCTTCTTTGTCAAGAGGTTTCCTCTGTTCGTCTTCTCAACTATTACCTATTATCGAGCTGCTACTTTTATATGTTCTGTATTGCTGTGTATGTGACGTTGCGACCTTGTATTTATCTGCTTTTGGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

277

Amino Acids

31.14

Weight (kDa)

5.58

Isoelectric Point (pI)

53.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 155 - 198 3.7e-10 Ring finger domain
zf-RING_11 PF17123 156 - 184 5.5e-09 RING-like zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 316
AccBSI CCGCTC 1 cut(s) 64
AciI CCGC 1 cut(s) 64
AclI AACGTT 1 cut(s) 181
AcoI YGGCCR 1 cut(s) 65
AcuI CTGAAG 2 cut(s) 7, 665
AdeI CACNNNGTG 1 cut(s) 306
AfaI GTAC 2 cut(s) 177, 275
AfiI CCNNNNNNNGG 3 cut(s) 161, 500, 604
AjiI CACGTC 1 cut(s) 167
AjnI CCWGG 1 cut(s) 312
AleI CACNNNNGTG 1 cut(s) 463
AluBI AGCT 4 cut(s) 392, 577, 619, 760
AluI AGCT 4 cut(s) 392, 577, 619, 760
Alw26I GTCTC 1 cut(s) 248
AoxI GGCC 2 cut(s) 65, 169
ApeKI GCWGC 5 cut(s) 434, 619, 698, 701, 760
Asp700I GAANNNNTTC 3 cut(s) 92, 267, 485
AsuC2I CCSGG 1 cut(s) 287
AsuHPI GGTGA 2 cut(s) 91, 450
BanI GGYRCC 1 cut(s) 316
BbsI GAAGAC 1 cut(s) 726
BbvI GCAGC 5 cut(s) 421, 606, 685, 688, 747
BccI CCATC 4 cut(s) 140, 410, 440, 634
BcgI CGANNNNNNTGC 2 cut(s) 601, 635
BciT130I CCWGG 1 cut(s) 314
BclI TGATCA 1 cut(s) 207
BcnI CCSGG 1 cut(s) 287
BcoDI GTCTC 1 cut(s) 248
BfaI CTAG 1 cut(s) 173
BfmI CTRYAG 2 cut(s) 126, 387
BisI GCNGC 6 cut(s) 65, 435, 620, 699, 702, 761
BlpI GCTNAGC 1 cut(s) 563
BlsI GCNGC 6 cut(s) 66, 436, 621, 700, 703, 762
Bme1390I CCNGG 2 cut(s) 287, 314
BmgBI CACGTC 1 cut(s) 167
BmiI GGNNCC 1 cut(s) 318
BmrFI CCNGG 2 cut(s) 287, 314
BmsI GCATC 3 cut(s) 421, 495, 591
BpiI GAAGAC 1 cut(s) 726
BplI GAGNNNNNCTC 4 cut(s) 367, 399, 708, 740
Bpu1102I GCTNAGC 1 cut(s) 563
BpuEI CTTGAG 1 cut(s) 394
BpuMI CCSGG 1 cut(s) 287
BsaWI WCCGGW 1 cut(s) 493
BsaXI ACNNNNNCTCC 4 cut(s) 661, 665, 691, 695
Bsc4I CCNNNNNNNGG 3 cut(s) 161, 500, 604
Bse118I RCCGGY 1 cut(s) 604
Bse1I ACTGG 2 cut(s) 56, 97
BseBI CCWGG 1 cut(s) 314
BseGI GGATG 1 cut(s) 510
BseLI CCNNNNNNNGG 3 cut(s) 161, 500, 604
BseMII CTCAG 1 cut(s) 554
BseNI ACTGG 2 cut(s) 56, 97
BseX3I CGGCCG 1 cut(s) 65
BseXI GCAGC 5 cut(s) 421, 606, 685, 688, 747
BseYI CCCAGC 1 cut(s) 615
Bsh1285I CGRYCG 1 cut(s) 68
BshFI GGCC 2 cut(s) 67, 171
BshNI GGYRCC 1 cut(s) 316
BsiEI CGRYCG 1 cut(s) 68
BsiSI CCGG 4 cut(s) 68, 287, 494, 605
BslI CCNNNNNNNGG 3 cut(s) 161, 500, 604
BsmAI GTCTC 1 cut(s) 248
BsnI GGCC 2 cut(s) 67, 171
Bsp1407I TGTACA 1 cut(s) 273
Bsp143I GATC 1 cut(s) 207
Bsp1720I GCTNAGC 1 cut(s) 563
BspACI CCGC 1 cut(s) 64
BspANI GGCC 2 cut(s) 67, 171
BspCNI CTCAG 1 cut(s) 555
BspLI GGNNCC 1 cut(s) 318
BspT107I GGYRCC 1 cut(s) 316
BsrBI CCGCTC 1 cut(s) 64
BsrFI RCCGGY 1 cut(s) 604
BsrGI TGTACA 1 cut(s) 273
BsrI ACTGG 2 cut(s) 56, 97
BssAI RCCGGY 1 cut(s) 604
BssMI GATC 1 cut(s) 207
Bst2UI CCWGG 1 cut(s) 314
Bst4CI ACNGT 2 cut(s) 256, 533
Bst6I CTCTTC 1 cut(s) 258
BstAPI GCANNNNNTGC 3 cut(s) 122, 522, 555
BstAUI TGTACA 1 cut(s) 273
BstC8I GCNNGC 2 cut(s) 518, 560
BstDEI CTNAG 1 cut(s) 563
BstF5I GGATG 1 cut(s) 510
BstKTI GATC 1 cut(s) 210
BstMAI GTCTC 1 cut(s) 248
BstMBI GATC 1 cut(s) 207
BstMCI CGRYCG 1 cut(s) 68
BstMWI GCNNNNNNNGC 6 cut(s) 122, 296, 398, 522, 555, 564
BstNI CCWGG 1 cut(s) 314
BstNSI RCATGY 1 cut(s) 520
BstSCI CCNGG 2 cut(s) 285, 312
BstSFI CTRYAG 2 cut(s) 126, 387
BstV1I GCAGC 5 cut(s) 421, 606, 685, 688, 747
BstV2I GAAGAC 1 cut(s) 726
BstZI CGGCCG 1 cut(s) 65
BsuRI GGCC 2 cut(s) 67, 171
BtrI CACGTC 1 cut(s) 167
BtsCI GGATG 1 cut(s) 510
BtsIMutI CAGTG 1 cut(s) 529
Cac8I GCNNGC 2 cut(s) 518, 560
Cfr10I RCCGGY 1 cut(s) 604
CseI GACGC 2 cut(s) 23, 638
CsiI ACCWGGT 1 cut(s) 312
Csp6I GTAC 2 cut(s) 176, 274
CviAII CATG 5 cut(s) 122, 159, 463, 517, 539
CviJI RGCY 8 cut(s) 67, 131, 171, 392, 562, 577, 619, 760
CviKI_1 RGCY 8 cut(s) 67, 131, 171, 392, 562, 577, 619, 760
CviQI GTAC 2 cut(s) 176, 274
DdeI CTNAG 1 cut(s) 563
DpnI GATC 1 cut(s) 209
DpnII GATC 1 cut(s) 207
DraIII CACNNNGTG 1 cut(s) 306
EaeI YGGCCR 1 cut(s) 65
EagI CGGCCG 1 cut(s) 65
Eam1104I CTCTTC 1 cut(s) 258
EarI CTCTTC 1 cut(s) 258
EclXI CGGCCG 1 cut(s) 65
Eco52I CGGCCG 1 cut(s) 65
Eco57I CTGAAG 2 cut(s) 7, 665
EcoRII CCWGG 1 cut(s) 312
FaeI CATG 5 cut(s) 125, 162, 466, 520, 542
FalI AAGNNNNNCTT 4 cut(s) 77, 109, 492, 524
FatI CATG 5 cut(s) 121, 158, 462, 516, 538
FbaI TGATCA 1 cut(s) 207
Fnu4HI GCNGC 6 cut(s) 65, 435, 620, 699, 702, 761
FokI GGATG 1 cut(s) 517
Fsp4HI GCNGC 6 cut(s) 65, 435, 620, 699, 702, 761
FspBI CTAG 1 cut(s) 173
GluI GCNGC 6 cut(s) 65, 435, 620, 699, 702, 761
GsaI CCCAGC 1 cut(s) 619
HaeIII GGCC 2 cut(s) 67, 171
HapII CCGG 4 cut(s) 68, 287, 494, 605
HgaI GACGC 2 cut(s) 23, 638
Hin1II CATG 5 cut(s) 125, 162, 466, 520, 542
HinfI GANTC 3 cut(s) 188, 268, 452
HpaII CCGG 4 cut(s) 68, 287, 494, 605
HphI GGTGA 2 cut(s) 91, 450
Hpy166II GTNNAC 1 cut(s) 164
Hpy188I TCNGA 4 cut(s) 42, 147, 200, 645
Hpy188III TCNNGA 3 cut(s) 108, 373, 714
Hpy8I GTNNAC 1 cut(s) 164
Hpy99I CGWCG 1 cut(s) 344
HpyAV CCTTC 2 cut(s) 475, 494
HpyCH4III ACNGT 2 cut(s) 256, 533
HpyCH4IV ACGT 3 cut(s) 166, 181, 798
HpyCH4V TGCA 1 cut(s) 549
HpyF10VI GCNNNNNNNGC 6 cut(s) 122, 296, 398, 522, 555, 564
HpyF3I CTNAG 1 cut(s) 563
HpySE526I ACGT 3 cut(s) 166, 181, 798
Hsp92II CATG 5 cut(s) 125, 162, 466, 520, 542
Ksp22I TGATCA 1 cut(s) 207
Kzo9I GATC 1 cut(s) 207
Lsp1109I GCAGC 5 cut(s) 421, 606, 685, 688, 747
LweI GCATC 3 cut(s) 421, 495, 591
MabI ACCWGGT 1 cut(s) 312
MaeI CTAG 1 cut(s) 173
MaeII ACGT 3 cut(s) 166, 181, 798
MaeIII GTNAC 3 cut(s) 189, 334, 794
MalI GATC 1 cut(s) 209
MbiI CCGCTC 1 cut(s) 64
MboI GATC 1 cut(s) 207
MboII GAAGA 5 cut(s) 13, 85, 275, 509, 726
MluCI AATT 1 cut(s) 426
MlyI GAGTC 1 cut(s) 197
MmeI TCCRAC 1 cut(s) 458
MroXI GAANNNNTTC 3 cut(s) 92, 267, 485
MseI TTAA 3 cut(s) 570, 654, 829
MslI CAYNNNNRTG 1 cut(s) 463
MspA1I CMGCKG 1 cut(s) 619
MspI CCGG 4 cut(s) 68, 287, 494, 605
MspR9I CCNGG 2 cut(s) 287, 314
MvaI CCWGG 1 cut(s) 314
MwoI GCNNNNNNNGC 6 cut(s) 122, 296, 398, 522, 555, 564
NciI CCSGG 1 cut(s) 287
NdeII GATC 1 cut(s) 207
NlaIII CATG 5 cut(s) 125, 162, 466, 520, 542
NlaIV GGNNCC 1 cut(s) 318
NmuCI GTSAC 2 cut(s) 189, 794
NspI RCATGY 1 cut(s) 520
OliI CACNNNNGTG 1 cut(s) 463
PaeI GCATGC 1 cut(s) 520
PcsI WCGNNNNNNNCGW 1 cut(s) 339
PdmI GAANNNNTTC 3 cut(s) 92, 267, 485
PfeI GAWTC 2 cut(s) 268, 452
PkrI GCNGC 6 cut(s) 66, 436, 621, 700, 703, 762
PleI GAGTC 1 cut(s) 196
PpsI GAGTC 1 cut(s) 196
Psp1406I AACGTT 1 cut(s) 181
Psp6I CCWGG 1 cut(s) 312
PspFI CCCAGC 1 cut(s) 615
PspGI CCWGG 1 cut(s) 312
PspN4I GGNNCC 1 cut(s) 318
PsrI GAACNNNNNNTAC 2 cut(s) 266, 298
PvuII CAGCTG 1 cut(s) 619
RsaI GTAC 2 cut(s) 177, 275
RsaNI GTAC 2 cut(s) 176, 274
RseI CAYNNNNRTG 1 cut(s) 463
SaqAI TTAA 3 cut(s) 570, 654, 829
SatI GCNGC 6 cut(s) 65, 435, 620, 699, 702, 761
Sau3AI GATC 1 cut(s) 207
SchI GAGTC 1 cut(s) 197
ScrFI CCNGG 2 cut(s) 287, 314
SexAI ACCWGGT 1 cut(s) 312
SfaNI GCATC 3 cut(s) 421, 495, 591
SfcI CTRYAG 2 cut(s) 126, 387
SmiMI CAYNNNNRTG 1 cut(s) 463
SmlI CTYRAG 1 cut(s) 373
SmoI CTYRAG 1 cut(s) 373
SphI GCATGC 1 cut(s) 520
Sse9I AATT 1 cut(s) 426
SsiI CCGC 1 cut(s) 64
SspMI CTAG 1 cut(s) 173
StyD4I CCNGG 2 cut(s) 285, 312
TaaI ACNGT 2 cut(s) 256, 533
TaiI ACGT 3 cut(s) 169, 184, 801
TaqI TCGA 3 cut(s) 60, 405, 756
TasI AATT 1 cut(s) 426
TatI WGTACW 2 cut(s) 175, 273
TauI GCSGC 1 cut(s) 67
TfiI GAWTC 2 cut(s) 268, 452
Tru1I TTAA 3 cut(s) 570, 654, 829
Tru9I TTAA 3 cut(s) 570, 654, 829
TscAI CASTG 1 cut(s) 536
TseFI GTSAC 2 cut(s) 189, 794
TseI GCWGC 5 cut(s) 434, 619, 698, 701, 760
Tsp45I GTSAC 2 cut(s) 189, 794
TspDTI ATGAA 1 cut(s) 276
TspRI CASTG 1 cut(s) 536
XceI RCATGY 1 cut(s) 520
XcmI CCANNNNNNNNNTGG 1 cut(s) 409
XmnI GAANNNNTTC 3 cut(s) 92, 267, 485
XspI CTAG 1 cut(s) 173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.