Rmu_sc0001576.1_g000034

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001576.1
OG0000056
Physical Location & Seq
Reverse (-)
150543 .. 151924
1382 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001576.1_g000034.1.cds

Sequence Viewer

Length: 951 bp
atgtttcgtctccacaatctgttctgttcaagcatgttctccaccgagaggcattattttgttagcagagcgacacaaagagagttgccctcagatgttgtcctccctgatacagaaatccaaagaggcgaagaaataattctcatggttcccatcagattaaggttcttcaagctaattggacgccgaagccaccgttggattggtgctccaagagatgttacgtatgatggtgcacccatcctcataaatgaagtaggaattaatttcaatctttcccttatcaaatccagaaggcataagtttagggactacatggctagaaagcttaccagcctgggtgtcccaaaatatgagcagccagctattcatcaaaaaatagttcaagcggttcaggtggccctccctcatttgcctatttctgtgatcatggtggatgtgactgtgcacttatttggggaagctgtaacacctataactgggataatggcagacttgctggccactgtatcaagtagtcaagtgaccattgatacggatacatgggaatccatggaaacatatatacacgagcccacgagtattcctgcaactaaaacatccattgagggtttggaaaatttgagacttgatgatttggaagaggatactattatacaggcatcaccctgtgttatttgtttggagcagcttgatcactttgacgctgatttgctgatggtggtaactcgcttgccgtgctcacacctttatcacagagcatgcattattgggtggctgcagaaaagtcacctgtgtcccttgtgccaatacccaatgccgagtgtggaacctgaagcgaggaagaagccaacaaaaccctcatggaccccgatgctccttatgatgtctgctggcggtgtgataactgctacgcttgtatgcagattatggaagcgaagtgaaggatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

316

Amino Acids

35.87

Weight (kDa)

6.86

Isoelectric Point (pI)

49.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 389, 897
AcoI YGGCCR 1 cut(s) 501
AcsI RAATTY 1 cut(s) 619
AcuI CTGAAG 1 cut(s) 855
AcyI GRCGYC 1 cut(s) 184
AdeI CACNNNGTG 1 cut(s) 671
AfiI CCNNNNNNNGG 2 cut(s) 48, 479
AgsI TTSAA 4 cut(s) 30, 172, 271, 386
AjnI CCWGG 1 cut(s) 336
AjuI GAANNNNNNNTTGG 2 cut(s) 181, 213
AluBI AGCT 5 cut(s) 175, 328, 365, 464, 691
AluI AGCT 5 cut(s) 175, 328, 365, 464, 691
Alw21I GWGCWC 4 cut(s) 211, 238, 450, 743
Alw26I GTCTC 2 cut(s) 14, 619
Alw44I GTGCAC 2 cut(s) 234, 446
AoxI GGCC 2 cut(s) 399, 501
ApaLI GTGCAC 2 cut(s) 234, 446
ApeKI GCWGC 3 cut(s) 358, 688, 778
ApoI RAATTY 1 cut(s) 619
AseI ATTAAT 1 cut(s) 264
Asp700I GAANNNNTTC 1 cut(s) 138
AspS9I GGNCC 2 cut(s) 400, 867
AsuHPI GGTGA 2 cut(s) 657, 782
AvaII GGWCC 1 cut(s) 867
BaeGI GKGCMC 2 cut(s) 238, 450
BalI TGGCCA 1 cut(s) 503
BanII GRGCYC 1 cut(s) 576
BauI CACGAG 2 cut(s) 569, 577
Bbv12I GWGCWC 4 cut(s) 211, 238, 450, 743
BbvI GCAGC 3 cut(s) 370, 700, 765
BccI CCATC 4 cut(s) 161, 224, 248, 712
BceAI ACGGC 1 cut(s) 721
BciT130I CCWGG 1 cut(s) 338
BciVI GTATCC 2 cut(s) 532, 640
BclI TGATCA 2 cut(s) 426, 694
BcoDI GTCTC 2 cut(s) 14, 619
BfaI CTAG 1 cut(s) 321
BfmI CTRYAG 1 cut(s) 779
BfuI GTATCC 2 cut(s) 532, 640
BisI GCNGC 3 cut(s) 359, 689, 779
BlsI GCNGC 3 cut(s) 360, 690, 780
Bme1390I CCNGG 1 cut(s) 338
Bme18I GGWCC 1 cut(s) 867
BmgT120I GGNCC 2 cut(s) 400, 867
BmiI GGNNCC 3 cut(s) 150, 831, 869
BmrFI CCNGG 1 cut(s) 338
BmrI ACTGGG 1 cut(s) 489
BmsI GCATC 2 cut(s) 671, 864
BmuI ACTGGG 1 cut(s) 489
BplI GAGNNNNNCTC 2 cut(s) 74, 106
BsaAI YACGTR 1 cut(s) 225
BsaHI GRCGYC 1 cut(s) 184
BsaJI CCNNGG 2 cut(s) 337, 552
Bsc4I CCNNNNNNNGG 2 cut(s) 48, 479
Bse1I ACTGG 1 cut(s) 484
BseBI CCWGG 1 cut(s) 338
BseDI CCNNGG 2 cut(s) 337, 552
BseGI GGATG 3 cut(s) 240, 442, 599
BseLI CCNNNNNNNGG 2 cut(s) 48, 479
BseMII CTCAG 1 cut(s) 105
BseNI ACTGG 1 cut(s) 484
BseSI GKGCMC 2 cut(s) 238, 450
BseXI GCAGC 3 cut(s) 370, 700, 765
BshFI GGCC 2 cut(s) 401, 503
BsiHKAI GWGCWC 4 cut(s) 211, 238, 450, 743
BslFI GGGAC 3 cut(s) 323, 329, 783
BslI CCNNNNNNNGG 2 cut(s) 48, 479
BsmAI GTCTC 2 cut(s) 14, 619
BsmBI CGTCTC 1 cut(s) 14
BsmFI GGGAC 3 cut(s) 323, 329, 783
BsnI GGCC 2 cut(s) 401, 503
Bsp1286I GDGCHC 5 cut(s) 211, 238, 450, 576, 743
Bsp143I GATC 2 cut(s) 426, 694
Bsp19I CCATGG 1 cut(s) 552
BspACI CCGC 2 cut(s) 389, 897
BspANI GGCC 2 cut(s) 401, 503
BspCNI CTCAG 1 cut(s) 104
BspLI GGNNCC 3 cut(s) 150, 831, 869
BspMAI CTGCAG 1 cut(s) 783
BsrI ACTGG 1 cut(s) 484
BssECI CCNNGG 2 cut(s) 337, 552
BssMI GATC 2 cut(s) 426, 694
BssNI GRCGYC 1 cut(s) 184
BssSI CACGAG 2 cut(s) 569, 577
BssT1I CCWWGG 1 cut(s) 552
Bst2BI CACGAG 2 cut(s) 569, 577
Bst2UI CCWGG 1 cut(s) 338
Bst4CI ACNGT 3 cut(s) 197, 445, 508
Bst6I CTCTTC 1 cut(s) 636
BstACI GRCGYC 1 cut(s) 184
BstBAI YACGTR 1 cut(s) 225
BstC8I GCNNGC 5 cut(s) 363, 501, 734, 763, 895
BstDEI CTNAG 1 cut(s) 91
BstDSI CCRYGG 1 cut(s) 552
BstF5I GGATG 3 cut(s) 240, 442, 599
BstKTI GATC 2 cut(s) 429, 697
BstMAI GTCTC 2 cut(s) 14, 619
BstMBI GATC 2 cut(s) 426, 694
BstMWI GCNNNNNNNGC 1 cut(s) 738
BstNI CCWGG 1 cut(s) 338
BstNSI RCATGY 2 cut(s) 37, 765
BstSCI CCNGG 1 cut(s) 336
BstSFI CTRYAG 1 cut(s) 779
BstSLI GKGCMC 2 cut(s) 238, 450
BstSNI TACGTA 1 cut(s) 225
BstV1I GCAGC 3 cut(s) 370, 700, 765
BsuI GTATCC 2 cut(s) 532, 640
BsuRI GGCC 2 cut(s) 401, 503
BtgI CCRYGG 1 cut(s) 552
BtsCI GGATG 3 cut(s) 240, 442, 599
BtsIMutI CAGTG 1 cut(s) 504
Cac8I GCNNGC 5 cut(s) 363, 501, 734, 763, 895
Cfr13I GGNCC 2 cut(s) 400, 867
CseI GACGC 2 cut(s) 192, 713
CviAII CATG 8 cut(s) 34, 145, 316, 430, 543, 553, 762, 864
DdeI CTNAG 1 cut(s) 91
DpnI GATC 2 cut(s) 428, 696
DpnII GATC 2 cut(s) 426, 694
DraIII CACNNNGTG 1 cut(s) 671
EaeI YGGCCR 1 cut(s) 501
Eam1104I CTCTTC 1 cut(s) 636
EarI CTCTTC 1 cut(s) 636
Eco105I TACGTA 1 cut(s) 225
Eco130I CCWWGG 1 cut(s) 552
Eco24I GRGCYC 1 cut(s) 576
Eco47I GGWCC 1 cut(s) 867
Eco57I CTGAAG 1 cut(s) 855
EcoRII CCWGG 1 cut(s) 336
EcoT14I CCWWGG 1 cut(s) 552
EcoT22I ATGCAT 1 cut(s) 767
EcoT38I GRGCYC 1 cut(s) 576
ErhI CCWWGG 1 cut(s) 552
Esp3I CGTCTC 1 cut(s) 14
FaeI CATG 8 cut(s) 37, 148, 319, 433, 546, 556, 765, 867
FaqI GGGAC 3 cut(s) 323, 329, 783
FatI CATG 8 cut(s) 33, 144, 315, 429, 542, 552, 761, 863
FbaI TGATCA 2 cut(s) 426, 694
Fnu4HI GCNGC 3 cut(s) 359, 689, 779
FokI GGATG 3 cut(s) 227, 449, 586
FriOI GRGCYC 1 cut(s) 576
Fsp4HI GCNGC 3 cut(s) 359, 689, 779
FspBI CTAG 1 cut(s) 321
GluI GCNGC 3 cut(s) 359, 689, 779
HaeIII GGCC 2 cut(s) 401, 503
HgaI GACGC 2 cut(s) 192, 713
Hin1I GRCGYC 1 cut(s) 184
Hin1II CATG 8 cut(s) 37, 148, 319, 433, 546, 556, 765, 867
HindIII AAGCTT 1 cut(s) 326
HinfI GANTC 1 cut(s) 548
HphI GGTGA 2 cut(s) 657, 782
Hpy166II GTNNAC 2 cut(s) 236, 448
Hpy188I TCNGA 2 cut(s) 94, 158
Hpy188III TCNNGA 1 cut(s) 291
Hpy8I GTNNAC 2 cut(s) 236, 448
HpyAV CCTTC 2 cut(s) 288, 938
HpyCH4III ACNGT 3 cut(s) 197, 445, 508
HpyCH4IV ACGT 1 cut(s) 224
HpyCH4V TGCA 6 cut(s) 236, 448, 590, 765, 781, 924
HpyF10VI GCNNNNNNNGC 1 cut(s) 738
HpyF3I CTNAG 1 cut(s) 91
HpySE526I ACGT 1 cut(s) 224
Hsp92I GRCGYC 1 cut(s) 184
Hsp92II CATG 8 cut(s) 37, 148, 319, 433, 546, 556, 765, 867
Ksp22I TGATCA 2 cut(s) 426, 694
Kzo9I GATC 2 cut(s) 426, 694
LmnI GCTCC 3 cut(s) 214, 685, 882
Lsp1109I GCAGC 3 cut(s) 370, 700, 765
LweI GCATC 2 cut(s) 671, 864
MaeI CTAG 1 cut(s) 321
MaeII ACGT 1 cut(s) 224
MaeIII GTNAC 6 cut(s) 220, 439, 466, 523, 724, 788
MalI GATC 2 cut(s) 428, 696
MboI GATC 2 cut(s) 426, 694
MboII GAAGA 4 cut(s) 143, 160, 653, 856
MhlI GDGCHC 5 cut(s) 211, 238, 450, 576, 743
MlsI TGGCCA 1 cut(s) 503
MluCI AATT 5 cut(s) 138, 177, 261, 265, 619
MluNI TGGCCA 1 cut(s) 503
MmeI TCCRAC 1 cut(s) 179
Mox20I TGGCCA 1 cut(s) 503
Mph1103I ATGCAT 1 cut(s) 767
MroXI GAANNNNTTC 1 cut(s) 138
MscI TGGCCA 1 cut(s) 503
MseI TTAA 2 cut(s) 161, 264
Msp20I TGGCCA 1 cut(s) 503
MspR9I CCNGG 1 cut(s) 338
MvaI CCWGG 1 cut(s) 338
MwoI GCNNNNNNNGC 1 cut(s) 738
NcoI CCATGG 1 cut(s) 552
NdeII GATC 2 cut(s) 426, 694
NlaIII CATG 8 cut(s) 37, 148, 319, 433, 546, 556, 765, 867
NlaIV GGNNCC 3 cut(s) 150, 831, 869
NmeAIII GCCGAG 1 cut(s) 846
NmuCI GTSAC 3 cut(s) 439, 523, 788
NsiI ATGCAT 1 cut(s) 767
NspI RCATGY 2 cut(s) 37, 765
PaeI GCATGC 1 cut(s) 765
PdmI GAANNNNTTC 1 cut(s) 138
PfeI GAWTC 1 cut(s) 548
PkrI GCNGC 3 cut(s) 360, 690, 780
Ppu21I YACGTR 1 cut(s) 225
PshBI ATTAAT 1 cut(s) 264
Psp6I CCWGG 1 cut(s) 336
PspGI CCWGG 1 cut(s) 336
PspN4I GGNNCC 3 cut(s) 150, 831, 869
PspPI GGNCC 2 cut(s) 400, 867
PstI CTGCAG 1 cut(s) 783
SaqAI TTAA 2 cut(s) 161, 264
SatI GCNGC 3 cut(s) 359, 689, 779
Sau3AI GATC 2 cut(s) 426, 694
Sau96I GGNCC 2 cut(s) 400, 867
ScrFI CCNGG 1 cut(s) 338
SduI GDGCHC 5 cut(s) 211, 238, 450, 576, 743
SfaNI GCATC 2 cut(s) 671, 864
SfcI CTRYAG 1 cut(s) 779
SinI GGWCC 1 cut(s) 867
SnaBI TACGTA 1 cut(s) 225
SphI GCATGC 1 cut(s) 765
Sse9I AATT 5 cut(s) 138, 177, 261, 265, 619
SsiI CCGC 2 cut(s) 389, 897
SspMI CTAG 1 cut(s) 321
StyD4I CCNGG 1 cut(s) 336
StyI CCWWGG 1 cut(s) 552
TaaI ACNGT 3 cut(s) 197, 445, 508
TaiI ACGT 1 cut(s) 227
TasI AATT 5 cut(s) 138, 177, 261, 265, 619
TfiI GAWTC 1 cut(s) 548
Tru1I TTAA 2 cut(s) 161, 264
Tru9I TTAA 2 cut(s) 161, 264
TscAI CASTG 1 cut(s) 511
TseFI GTSAC 3 cut(s) 439, 523, 788
TseI GCWGC 3 cut(s) 358, 688, 778
Tsp45I GTSAC 3 cut(s) 439, 523, 788
TspDTI ATGAA 2 cut(s) 267, 359
TspGWI ACGGA 1 cut(s) 551
TspRI CASTG 1 cut(s) 511
VneI GTGCAC 2 cut(s) 234, 446
VpaK11BI GGWCC 1 cut(s) 867
VspI ATTAAT 1 cut(s) 264
XapI RAATTY 1 cut(s) 619
XceI RCATGY 2 cut(s) 37, 765
XcmI CCANNNNNNNNNTGG 2 cut(s) 200, 610
XmnI GAANNNNTTC 1 cut(s) 138
XspI CTAG 1 cut(s) 321
Zsp2I ATGCAT 1 cut(s) 767
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.