Rorug03G0238300

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000056
Physical Location & Seq
Forward (+)
22170917 .. 22174001
3085 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0238300.1

Sequence Viewer

Length: 1059 bp
ATGGCGAAGTACGGCGAGGGCGACAAGCGGTGGATCGTGGAAGACAGACCCGACGGAGCGAACGTCCACAACTGGCACTGGGCGGAGACCGATTGCCTGGGCTGGTCACGTGACCTCCTCACCAAGCTCCTCTCCAACCTCACCATCCTCGACGGCGAAGGCGACCTCTTCGTCAAGACCAACAAGGTCGAGAAGGTCGAAGGCGACGCCTACGTCAACATTCGCAAGGGCAAGATCATCCCCGGCTACGAAATCAGCCTCAGTCTCTCATGGGAGGGCGAGGCCAGAGACTCCGACGGCAAATCGCTGCTCAAGGTCGACGGCGCCGTCGAGATTCCCTACATCGCCGACGAGAACGCCGACGAGGACCCCGAGGTTAAGGTTTCGGTGAAGGACGAGGGCCCCATTGGGAGGAGGATTAAGGAGGCTATGGTGGCGAAGGGGAAGCCTGTGATTTTGGAGAAGGTTAGGGTTTATGTGCAGAGTATGGCGCAGGGTGGGCCGGCCAAGGATGAGGCCGAGGCGAAGAAGATTGCGCCGAAGGCTAATAATAATTCGACGAGTTCCGGGGCGGCGGTGAAGAAGGAGGTGGTGGTGGTGGTGGAGAAGAAGGAGGTGAAGAAGAAGGAGAGCAAGAAAGGGTTTAAGACGATTAGTATGACTGAGAAGTTTAGCTGCAGGGCGAGTAATTTGTATGAGATTTTGATGGATGATAATAGATGGAAGGGGTTTACTCAGAGCAATGCTAAGATAAGTAAAGAGGTTGGAGGAGAGTTCAGTATTTTCGATGGGTCGGTGACGGGTAAGAATTTGGAGCTGCAGAATGGCAAGTTGATTGTGCAGAATTGGAGATTTGGGAGTTGGCCTGATGGGATTGAGTCGAAGGTGACACTTACATTTGATGAGCCTGAACCTGGTCTAACAGTTGTCAAGCTAACCCATGTGGATGTTCCTGAGGAAGACAGATACGGGAATGCCACTGTGGTAGAGAATACTGAGAGAGGATGGCGGGATCTTATCTTTCAGAGGATAAGGGCAGTTTTTGGTTTCGGAATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

352

Amino Acids

39.18

Weight (kDa)

5.74

Isoelectric Point (pI)

26.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Aha1_N PF09229 29 - 165 9.6e-34 Activator of Hsp90 ATPase, N-terminal
AHSA1 PF08327 228 - 348 1.9e-14 Activator of Hsp90 ATPase homolog 1-like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 170, 212, 326
AccB1I GGYRCC 1 cut(s) 323
AccI GTMKAC 1 cut(s) 318
AciI CCGC 5 cut(s) 28, 83, 572, 575, 1009
AclWI GGATC 2 cut(s) 41, 1020
AcoI YGGCCR 1 cut(s) 504
AcsI RAATTY 2 cut(s) 808, 1053
AcvI CACGTG 1 cut(s) 110
AcyI GRCGYC 2 cut(s) 207, 324
AfaI GTAC 1 cut(s) 11
AfiI CCNNNNNNNGG 2 cut(s) 411, 914
AjnI CCWGG 2 cut(s) 96, 913
AluBI AGCT 4 cut(s) 127, 675, 817, 934
AluI AGCT 4 cut(s) 127, 675, 817, 934
Alw26I GTCTC 3 cut(s) 80, 269, 282
AlwI GGATC 2 cut(s) 41, 1020
Ama87I CYCGRG 1 cut(s) 371
AoxI GGCC 6 cut(s) 282, 400, 500, 504, 516, 863
ApaI GGGCCC 1 cut(s) 404
ApeKI GCWGC 3 cut(s) 307, 675, 817
ApoI RAATTY 2 cut(s) 808, 1053
AspLEI GCGC 3 cut(s) 326, 493, 538
AspS9I GGNCC 4 cut(s) 367, 400, 401, 500
AsuC2I CCSGG 2 cut(s) 243, 568
AsuHPI GGTGA 7 cut(s) 112, 133, 400, 589, 628, 808, 898
AvaI CYCGRG 1 cut(s) 371
AvaII GGWCC 1 cut(s) 367
AxyI CCTNAGG 1 cut(s) 954
BaeGI GKGCMC 1 cut(s) 404
BanI GGYRCC 1 cut(s) 323
BanII GRGCYC 1 cut(s) 404
BbrPI CACGTG 1 cut(s) 110
BbsI GAAGAC 2 cut(s) 48, 966
BbvI GCAGC 3 cut(s) 294, 662, 804
BccI CCATC 6 cut(s) 152, 700, 714, 782, 863, 999
BceAI ACGGC 5 cut(s) 28, 169, 311, 313, 337
BciT130I CCWGG 2 cut(s) 98, 915
BcnI CCSGG 2 cut(s) 243, 568
BcoDI GTCTC 3 cut(s) 80, 269, 282
BfmI CTRYAG 2 cut(s) 676, 818
BfoI RGCGCY 1 cut(s) 327
BisI GCNGC 4 cut(s) 308, 573, 676, 818
BlsI GCNGC 4 cut(s) 309, 574, 677, 819
Bme1390I CCNGG 4 cut(s) 98, 243, 568, 915
Bme18I GGWCC 1 cut(s) 367
BmeT110I CYCGRG 1 cut(s) 371
BmgT120I GGNCC 4 cut(s) 367, 400, 401, 500
BmiI GGNNCC 4 cut(s) 325, 369, 402, 403
BmrFI CCNGG 4 cut(s) 98, 243, 568, 915
BmrI ACTGGG 1 cut(s) 88
BmuI ACTGGG 1 cut(s) 88
BpiI GAAGAC 2 cut(s) 48, 966
BpuEI CTTGAG 1 cut(s) 296
BpuMI CCSGG 2 cut(s) 243, 568
BsaAI YACGTR 1 cut(s) 110
BsaHI GRCGYC 2 cut(s) 207, 324
BsaI GGTCTC 1 cut(s) 80
BsaJI CCNNGG 6 cut(s) 97, 241, 372, 507, 519, 567
BsaXI ACNNNNNCTCC 4 cut(s) 48, 78, 99, 129
Bsc4I CCNNNNNNNGG 2 cut(s) 411, 914
Bse118I RCCGGY 1 cut(s) 502
Bse1I ACTGG 2 cut(s) 77, 83
Bse21I CCTNAGG 1 cut(s) 954
Bse3DI GCAATG 1 cut(s) 748
BseBI CCWGG 2 cut(s) 98, 915
BseDI CCNNGG 6 cut(s) 97, 241, 372, 507, 519, 567
BseGI GGATG 6 cut(s) 144, 237, 517, 715, 952, 1010
BseLI CCNNNNNNNGG 2 cut(s) 411, 914
BseMI GCAATG 1 cut(s) 748
BseMII CTCAG 5 cut(s) 274, 654, 749, 945, 987
BseNI ACTGG 2 cut(s) 77, 83
BseRI GAGGAG 4 cut(s) 107, 119, 427, 783
BseSI GKGCMC 1 cut(s) 404
BseXI GCAGC 3 cut(s) 294, 662, 804
BsgI GTGCAG 2 cut(s) 500, 860
BshFI GGCC 6 cut(s) 284, 402, 502, 506, 518, 865
BshNI GGYRCC 1 cut(s) 323
BsiHKCI CYCGRG 1 cut(s) 371
BsiSI CCGG 3 cut(s) 243, 503, 567
BslI CCNNNNNNNGG 2 cut(s) 411, 914
BsmAI GTCTC 3 cut(s) 80, 269, 282
BsmI GAATGC 1 cut(s) 979
BsnI GGCC 6 cut(s) 284, 402, 502, 506, 518, 865
Bso31I GGTCTC 1 cut(s) 80
BsoBI CYCGRG 1 cut(s) 371
Bsp120I GGGCCC 1 cut(s) 400
Bsp1286I GDGCHC 1 cut(s) 404
Bsp143I GATC 3 cut(s) 33, 234, 1012
BspACI CCGC 5 cut(s) 28, 83, 572, 575, 1009
BspANI GGCC 6 cut(s) 284, 402, 502, 506, 518, 865
BspCNI CTCAG 5 cut(s) 273, 655, 748, 946, 988
BspLI GGNNCC 4 cut(s) 325, 369, 402, 403
BspMAI CTGCAG 2 cut(s) 680, 822
BspPI GGATC 2 cut(s) 41, 1020
BspT107I GGYRCC 1 cut(s) 323
BspTNI GGTCTC 1 cut(s) 80
BsrDI GCAATG 1 cut(s) 748
BsrFI RCCGGY 1 cut(s) 502
BsrI ACTGG 2 cut(s) 77, 83
BssAI RCCGGY 1 cut(s) 502
BssECI CCNNGG 6 cut(s) 97, 241, 372, 507, 519, 567
BssMI GATC 3 cut(s) 33, 234, 1012
BssNI GRCGYC 2 cut(s) 207, 324
BssT1I CCWWGG 1 cut(s) 507
Bst2UI CCWGG 2 cut(s) 98, 915
Bst4CI ACNGT 2 cut(s) 925, 982
Bst6I CTCTTC 1 cut(s) 173
BstACI GRCGYC 2 cut(s) 207, 324
BstBAI YACGTR 1 cut(s) 110
BstC8I GCNNGC 1 cut(s) 504
BstDEI CTNAG 6 cut(s) 260, 663, 735, 747, 954, 996
BstF5I GGATG 6 cut(s) 144, 237, 517, 715, 952, 1010
BstH2I RGCGCY 1 cut(s) 327
BstHHI GCGC 3 cut(s) 326, 493, 538
BstKTI GATC 3 cut(s) 36, 237, 1015
BstMAI GTCTC 3 cut(s) 80, 269, 282
BstMBI GATC 3 cut(s) 33, 234, 1012
BstMWI GCNNNNNNNGC 3 cut(s) 434, 499, 542
BstNI CCWGG 2 cut(s) 98, 915
BstSCI CCNGG 4 cut(s) 96, 241, 566, 913
BstSFI CTRYAG 2 cut(s) 676, 818
BstSLI GKGCMC 1 cut(s) 404
BstV1I GCAGC 3 cut(s) 294, 662, 804
BstV2I GAAGAC 2 cut(s) 48, 966
BstX2I RGATCY 1 cut(s) 1012
BstYI RGATCY 1 cut(s) 1012
Bsu36I CCTNAGG 1 cut(s) 954
BsuRI GGCC 6 cut(s) 284, 402, 502, 506, 518, 865
BtgZI GCGATG 1 cut(s) 328
BtsCI GGATG 6 cut(s) 144, 237, 517, 715, 952, 1010
BtsIMutI CAGTG 2 cut(s) 76, 978
Cac8I GCNNGC 1 cut(s) 504
CfoI GCGC 3 cut(s) 326, 493, 538
Cfr10I RCCGGY 1 cut(s) 502
Cfr13I GGNCC 4 cut(s) 367, 400, 401, 500
CseI GACGC 1 cut(s) 215
CsiI ACCWGGT 1 cut(s) 913
Csp6I GTAC 1 cut(s) 10
CviAII CATG 2 cut(s) 270, 941
CviQI GTAC 1 cut(s) 10
DdeI CTNAG 6 cut(s) 260, 663, 735, 747, 954, 996
DinI GGCGCC 1 cut(s) 325
DpnI GATC 3 cut(s) 35, 236, 1014
DpnII GATC 3 cut(s) 33, 234, 1012
DrdI GACNNNNNNGTC 3 cut(s) 170, 212, 326
DseDI GACNNNNNNGTC 3 cut(s) 170, 212, 326
EaeI YGGCCR 1 cut(s) 504
Eam1104I CTCTTC 1 cut(s) 173
EarI CTCTTC 1 cut(s) 173
EciI GGCGGA 1 cut(s) 98
Eco130I CCWWGG 1 cut(s) 507
Eco24I GRGCYC 1 cut(s) 404
Eco31I GGTCTC 1 cut(s) 80
Eco47I GGWCC 1 cut(s) 367
Eco72I CACGTG 1 cut(s) 110
Eco81I CCTNAGG 1 cut(s) 954
Eco88I CYCGRG 1 cut(s) 371
EcoO109I RGGNCCY 3 cut(s) 367, 400, 401
EcoRII CCWGG 2 cut(s) 96, 913
EcoT14I CCWWGG 1 cut(s) 507
EcoT38I GRGCYC 1 cut(s) 404
EgeI GGCGCC 1 cut(s) 325
EheI GGCGCC 1 cut(s) 325
ErhI CCWWGG 1 cut(s) 507
FaeI CATG 2 cut(s) 273, 944
FaiI YATR 7 cut(s) 271, 431, 477, 488, 659, 696, 942
FatI CATG 2 cut(s) 269, 940
FauI CCCGC 1 cut(s) 1002
FblI GTMKAC 1 cut(s) 318
Fnu4HI GCNGC 4 cut(s) 308, 573, 676, 818
FokI GGATG 6 cut(s) 131, 224, 524, 722, 959, 1017
FriOI GRGCYC 1 cut(s) 404
FseI GGCCGGCC 1 cut(s) 506
Fsp4HI GCNGC 4 cut(s) 308, 573, 676, 818
GlaI GCGC 3 cut(s) 325, 492, 537
GluI GCNGC 4 cut(s) 308, 573, 676, 818
HaeII RGCGCY 1 cut(s) 327
HaeIII GGCC 6 cut(s) 284, 402, 502, 506, 518, 865
HapII CCGG 3 cut(s) 243, 503, 567
HgaI GACGC 1 cut(s) 215
HhaI GCGC 3 cut(s) 326, 493, 538
Hin1I GRCGYC 2 cut(s) 207, 324
Hin1II CATG 2 cut(s) 273, 944
Hin6I GCGC 3 cut(s) 324, 491, 536
HinP1I GCGC 3 cut(s) 324, 491, 536
HincII GTYRAC 2 cut(s) 217, 319
HindII GTYRAC 2 cut(s) 217, 319
HinfI GANTC 3 cut(s) 290, 334, 878
HpaII CCGG 3 cut(s) 243, 503, 567
HphI GGTGA 7 cut(s) 112, 133, 400, 589, 628, 808, 898
Hpy166II GTNNAC 4 cut(s) 67, 217, 319, 732
Hpy188I TCNGA 4 cut(s) 295, 738, 1026, 1052
Hpy188III TCNNGA 4 cut(s) 175, 190, 331, 953
Hpy8I GTNNAC 4 cut(s) 67, 217, 319, 732
Hpy99I CGWCG 9 cut(s) 56, 155, 209, 299, 323, 332, 353, 365, 562
HpyCH4III ACNGT 2 cut(s) 925, 982
HpyCH4IV ACGT 3 cut(s) 63, 109, 213
HpyCH4V TGCA 4 cut(s) 481, 678, 820, 841
HpyF10VI GCNNNNNNNGC 3 cut(s) 434, 499, 542
HpyF3I CTNAG 6 cut(s) 260, 663, 735, 747, 954, 996
HpySE526I ACGT 3 cut(s) 63, 109, 213
Hsp92I GRCGYC 2 cut(s) 207, 324
Hsp92II CATG 2 cut(s) 273, 944
HspAI GCGC 3 cut(s) 324, 491, 536
KasI GGCGCC 1 cut(s) 323
KroI GCCGGC 1 cut(s) 502
KroNI GCCGGC 1 cut(s) 504
Kzo9I GATC 3 cut(s) 33, 234, 1012
LmnI GCTCC 3 cut(s) 56, 132, 814
Lsp1109I GCAGC 3 cut(s) 294, 662, 804
MabI ACCWGGT 1 cut(s) 913
MaeII ACGT 3 cut(s) 63, 109, 213
MaeIII GTNAC 4 cut(s) 105, 110, 796, 886
MalI GATC 3 cut(s) 35, 236, 1014
MboI GATC 3 cut(s) 33, 234, 1012
MboII GAAGA 9 cut(s) 53, 160, 538, 541, 592, 619, 631, 634, 971
MflI RGATCY 1 cut(s) 1012
MhlI GDGCHC 1 cut(s) 404
MluCI AATT 5 cut(s) 553, 688, 808, 844, 1053
Mly113I GGCGCC 1 cut(s) 324
MlyI GAGTC 2 cut(s) 284, 887
MmeI TCCRAC 3 cut(s) 159, 318, 745
MroNI GCCGGC 1 cut(s) 502
MseI TTAA 4 cut(s) 378, 420, 645, 1057
MslI CAYNNNNRTG 1 cut(s) 945
MspI CCGG 3 cut(s) 243, 503, 567
MspR9I CCNGG 4 cut(s) 98, 243, 568, 915
Mva1269I GAATGC 1 cut(s) 979
MvaI CCWGG 2 cut(s) 98, 915
MwoI GCNNNNNNNGC 3 cut(s) 434, 499, 542
NaeI GCCGGC 1 cut(s) 504
NarI GGCGCC 1 cut(s) 324
NciI CCSGG 2 cut(s) 243, 568
NdeII GATC 3 cut(s) 33, 234, 1012
NgoMIV GCCGGC 1 cut(s) 502
NlaIII CATG 2 cut(s) 273, 944
NlaIV GGNNCC 4 cut(s) 325, 369, 402, 403
NmeAIII GCCGAG 1 cut(s) 544
NmuCI GTSAC 4 cut(s) 105, 110, 796, 886
PcsI WCGNNNNNNNCGW 8 cut(s) 18, 60, 159, 195, 324, 327, 357, 369
PctI GAATGC 1 cut(s) 979
PdiI GCCGGC 1 cut(s) 504
PfeI GAWTC 1 cut(s) 334
PkrI GCNGC 4 cut(s) 309, 574, 677, 819
PleI GAGTC 2 cut(s) 284, 886
PluTI GGCGCC 1 cut(s) 327
PmaCI CACGTG 1 cut(s) 110
PmlI CACGTG 1 cut(s) 110
PpsI GAGTC 2 cut(s) 284, 886
Ppu21I YACGTR 1 cut(s) 110
PpuMI RGGWCCY 1 cut(s) 367
Psp5II RGGWCCY 1 cut(s) 367
Psp6I CCWGG 2 cut(s) 96, 913
PspCI CACGTG 1 cut(s) 110
PspGI CCWGG 2 cut(s) 96, 913
PspN4I GGNNCC 4 cut(s) 325, 369, 402, 403
PspOMI GGGCCC 1 cut(s) 400
PspPI GGNCC 4 cut(s) 367, 400, 401, 500
PspPPI RGGWCCY 1 cut(s) 367
PstI CTGCAG 2 cut(s) 680, 822
PsuI RGATCY 1 cut(s) 1012
RigI GGCCGGCC 1 cut(s) 506
RsaI GTAC 1 cut(s) 11
RsaNI GTAC 1 cut(s) 10
RseI CAYNNNNRTG 1 cut(s) 945
SalI GTCGAC 1 cut(s) 317
SaqAI TTAA 4 cut(s) 378, 420, 645, 1057
SatI GCNGC 4 cut(s) 308, 573, 676, 818
Sau3AI GATC 3 cut(s) 33, 234, 1012
Sau96I GGNCC 4 cut(s) 367, 400, 401, 500
SchI GAGTC 2 cut(s) 284, 887
ScrFI CCNGG 4 cut(s) 98, 243, 568, 915
SduI GDGCHC 1 cut(s) 404
SexAI ACCWGGT 1 cut(s) 913
SfcI CTRYAG 2 cut(s) 676, 818
SfoI GGCGCC 1 cut(s) 325
SinI GGWCC 1 cut(s) 367
SmiMI CAYNNNNRTG 1 cut(s) 945
SmlI CTYRAG 1 cut(s) 311
SmoI CTYRAG 1 cut(s) 311
Sse9I AATT 5 cut(s) 553, 688, 808, 844, 1053
SsiI CCGC 5 cut(s) 28, 83, 572, 575, 1009
SspDI GGCGCC 1 cut(s) 323
StyD4I CCNGG 4 cut(s) 96, 241, 566, 913
StyI CCWWGG 1 cut(s) 507
TaaI ACNGT 2 cut(s) 925, 982
TaiI ACGT 3 cut(s) 66, 112, 216
TaqI TCGA 8 cut(s) 150, 189, 198, 318, 330, 557, 786, 881
TaqII GACCGA 1 cut(s) 104
TasI AATT 5 cut(s) 553, 688, 808, 844, 1053
TauI GCSGC 1 cut(s) 575
TfiI GAWTC 1 cut(s) 334
Tru1I TTAA 4 cut(s) 378, 420, 645, 1057
Tru9I TTAA 4 cut(s) 378, 420, 645, 1057
TscAI CASTG 2 cut(s) 83, 985
TseFI GTSAC 4 cut(s) 105, 110, 796, 886
TseI GCWGC 3 cut(s) 307, 675, 817
Tsp45I GTSAC 4 cut(s) 105, 110, 796, 886
TspGWI ACGGA 1 cut(s) 69
TspRI CASTG 2 cut(s) 83, 985
VpaK11BI GGWCC 1 cut(s) 367
XapI RAATTY 2 cut(s) 808, 1053
XmiI GTMKAC 1 cut(s) 318
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.