FvH4_6g31360

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000056
Physical Location & Seq
Forward (+)
24514726 .. 24515554
829 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g31360.t1

Sequence Viewer

Length: 678 bp
ATGTCTCGTGTGATACATGATTTCCATCACCATGCTAGGCAGAGAAGTGATAGTCAACCACACCCTGACGCCGGGGAGGACGATCTCGTTGTGCGATTTGATTACGACAAGATTACCGGAAGAGTGGTTCCCGGGGATGGATATCAACTTGAGACCAGAACCCCGTTAGGTCAGTATAACGTTTTAGTACAGTTTTCTGTAGCCAAGCAGTTCTCCTCCGATTGGCTTGTTGAGTTTGATCTCAAAAAGATGGTTACCACGGCTCTTTCCAGCATGGGTGTCCAGGAAGATCGTTTTGCAGATATTACTGATAGCGTATTCTTGGCGATTGACATGGCTGAGTCACCCAGGCTGCCTCTTGATGTGAGCGTATGGGACGCCACTTGGGTCGATGAATGTGAACCCACTGTGGTTCCTGCTGCTGCATCATTCATTGAGGGTTTGGAGCGAGTGAGACTTACGGAATTGCAAGACCATGTTATTCGACAGACACCCTCCTGTGCTATTTGCTGGGAAGATTTTGCACAACAGCGACAACTACAACCAGTTCAAGTGCTGGTTACTCGTCTGCCCTGCTCGCACCGTTATCATTTGGATTGCATTGCCCTGTGCCTGGAGAGGAGTAACTTATGTCCCATGTGCCGCTACCCGATGCCAACTCAAGATCAAGCAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

226

Amino Acids

25.65

Weight (kDa)

4.91

Isoelectric Point (pI)

51.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 166 - 215 1.3e-09 Ring finger domain
zf-rbx1 PF12678 166 - 215 5.6e-07 RING-H2 zinc finger domain
zf-RING_11 PF17123 167 - 201 6.8e-07 RING-like zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 643
AclI AACGTT 1 cut(s) 180
AcyI GRCGYC 2 cut(s) 69, 378
AfaI GTAC 1 cut(s) 189
AfiI CCNNNNNNNGG 4 cut(s) 71, 137, 222, 613
AgsI TTSAA 1 cut(s) 551
AjnI CCWGG 3 cut(s) 282, 347, 612
AloI GAACNNNNNNTCC 2 cut(s) 111, 143
Alw26I GTCTC 3 cut(s) 9, 146, 448
Ama87I CYCGRG 1 cut(s) 131
ApeKI GCWGC 3 cut(s) 352, 419, 422
AsuC2I CCSGG 3 cut(s) 73, 132, 133
AsuHPI GGTGA 2 cut(s) 20, 336
AvaI CYCGRG 1 cut(s) 131
BauI CACGAG 1 cut(s) 6
BbvI GCAGC 3 cut(s) 339, 406, 409
BccI CCATC 3 cut(s) 33, 131, 244
BceAI ACGGC 1 cut(s) 276
BciT130I CCWGG 3 cut(s) 284, 349, 614
BcnI CCSGG 3 cut(s) 73, 132, 133
BcoDI GTCTC 3 cut(s) 9, 146, 448
BfaI CTAG 1 cut(s) 36
BfmI CTRYAG 1 cut(s) 198
BisI GCNGC 4 cut(s) 353, 420, 423, 643
BlsI GCNGC 4 cut(s) 354, 421, 424, 644
Bme1390I CCNGG 6 cut(s) 73, 132, 133, 284, 349, 614
BmeT110I CYCGRG 1 cut(s) 131
BmiI GGNNCC 2 cut(s) 129, 414
BmrFI CCNGG 6 cut(s) 73, 132, 133, 284, 349, 614
BmsI GCATC 2 cut(s) 434, 642
BpmI CTGGAG 1 cut(s) 635
BpuEI CTTGAG 2 cut(s) 170, 645
BpuMI CCSGG 3 cut(s) 73, 132, 133
BsaBI GATNNNNATC 2 cut(s) 24, 141
BsaHI GRCGYC 2 cut(s) 69, 378
BsaI GGTCTC 1 cut(s) 146
BsaJI CCNNGG 5 cut(s) 72, 131, 132, 258, 347
BsaWI WCCGGW 1 cut(s) 116
Bsc4I CCNNNNNNNGG 4 cut(s) 71, 137, 222, 613
Bse1I ACTGG 1 cut(s) 545
Bse3DI GCAATG 1 cut(s) 600
Bse8I GATNNNNATC 2 cut(s) 24, 141
BseBI CCWGG 3 cut(s) 284, 349, 614
BseDI CCNNGG 5 cut(s) 72, 131, 132, 258, 347
BseGI GGATG 1 cut(s) 142
BseJI GATNNNNATC 2 cut(s) 24, 141
BseLI CCNNNNNNNGG 4 cut(s) 71, 137, 222, 613
BseMI GCAATG 1 cut(s) 600
BseMII CTCAG 1 cut(s) 330
BseNI ACTGG 1 cut(s) 545
BseRI GAGGAG 2 cut(s) 205, 634
BseXI GCAGC 3 cut(s) 339, 406, 409
BseYI CCCAGC 1 cut(s) 510
BsiHKCI CYCGRG 1 cut(s) 131
BsiSI CCGG 3 cut(s) 72, 117, 132
BslFI GGGAC 2 cut(s) 389, 618
BslI CCNNNNNNNGG 4 cut(s) 71, 137, 222, 613
BsmAI GTCTC 3 cut(s) 9, 146, 448
BsmFI GGGAC 2 cut(s) 389, 618
Bso31I GGTCTC 1 cut(s) 146
BsoBI CYCGRG 1 cut(s) 131
Bsp143I GATC 4 cut(s) 82, 238, 289, 664
BspACI CCGC 1 cut(s) 643
BspCNI CTCAG 1 cut(s) 331
BspLI GGNNCC 2 cut(s) 129, 414
BspTNI GGTCTC 1 cut(s) 146
BsrDI GCAATG 1 cut(s) 600
BsrI ACTGG 1 cut(s) 545
BssECI CCNNGG 5 cut(s) 72, 131, 132, 258, 347
BssMI GATC 4 cut(s) 82, 238, 289, 664
BssNI GRCGYC 2 cut(s) 69, 378
BssSI CACGAG 1 cut(s) 6
Bst2BI CACGAG 1 cut(s) 6
Bst2UI CCWGG 3 cut(s) 284, 349, 614
Bst4CI ACNGT 3 cut(s) 192, 409, 584
Bst6I CTCTTC 1 cut(s) 115
BstACI GRCGYC 2 cut(s) 69, 378
BstC8I GCNNGC 1 cut(s) 578
BstDEI CTNAG 1 cut(s) 339
BstDSI CCRYGG 1 cut(s) 258
BstEII GGTNACC 1 cut(s) 253
BstF5I GGATG 1 cut(s) 142
BstKTI GATC 4 cut(s) 85, 241, 292, 667
BstMAI GTCTC 3 cut(s) 9, 146, 448
BstMBI GATC 4 cut(s) 82, 238, 289, 664
BstMWI GCNNNNNNNGC 1 cut(s) 577
BstNI CCWGG 3 cut(s) 284, 349, 614
BstPI GGTNACC 1 cut(s) 253
BstSCI CCNGG 6 cut(s) 71, 130, 131, 282, 347, 612
BstSFI CTRYAG 1 cut(s) 198
BstV1I GCAGC 3 cut(s) 339, 406, 409
BtgI CCRYGG 1 cut(s) 258
BtsCI GGATG 1 cut(s) 142
BtsIMutI CAGTG 1 cut(s) 405
Cac8I GCNNGC 1 cut(s) 578
Cfr9I CCCGGG 1 cut(s) 131
CseI GACGC 2 cut(s) 77, 386
Csp6I GTAC 1 cut(s) 188
CviAII CATG 6 cut(s) 17, 32, 274, 334, 476, 637
CviJI RGCY 5 cut(s) 203, 226, 263, 338, 352
CviKI_1 RGCY 5 cut(s) 203, 226, 263, 338, 352
CviQI GTAC 1 cut(s) 188
DdeI CTNAG 1 cut(s) 339
DpnI GATC 4 cut(s) 84, 240, 291, 666
DpnII GATC 4 cut(s) 82, 238, 289, 664
Eam1104I CTCTTC 1 cut(s) 115
EarI CTCTTC 1 cut(s) 115
Eco31I GGTCTC 1 cut(s) 146
Eco32I GATATC 1 cut(s) 143
Eco88I CYCGRG 1 cut(s) 131
Eco91I GGTNACC 1 cut(s) 253
EcoO65I GGTNACC 1 cut(s) 253
EcoRII CCWGG 3 cut(s) 282, 347, 612
EcoRV GATATC 1 cut(s) 143
FaeI CATG 6 cut(s) 20, 35, 277, 337, 479, 640
FaiI YATR 9 cut(s) 18, 33, 177, 275, 335, 373, 477, 631, 638
FaqI GGGAC 2 cut(s) 389, 618
FatI CATG 6 cut(s) 16, 31, 273, 333, 475, 636
Fnu4HI GCNGC 4 cut(s) 353, 420, 423, 643
FokI GGATG 1 cut(s) 149
Fsp4HI GCNGC 4 cut(s) 353, 420, 423, 643
FspBI CTAG 1 cut(s) 36
GluI GCNGC 4 cut(s) 353, 420, 423, 643
GsaI CCCAGC 1 cut(s) 514
GsuI CTGGAG 1 cut(s) 635
HapII CCGG 3 cut(s) 72, 117, 132
HgaI GACGC 2 cut(s) 77, 386
Hin1I GRCGYC 2 cut(s) 69, 378
Hin1II CATG 6 cut(s) 20, 35, 277, 337, 479, 640
HincII GTYRAC 1 cut(s) 56
HindII GTYRAC 1 cut(s) 56
HinfI GANTC 1 cut(s) 341
HpaII CCGG 3 cut(s) 72, 117, 132
HphI GGTGA 2 cut(s) 20, 336
Hpy166II GTNNAC 2 cut(s) 56, 401
Hpy188I TCNGA 1 cut(s) 220
Hpy188III TCNNGA 2 cut(s) 359, 662
Hpy8I GTNNAC 2 cut(s) 56, 401
HpyCH4III ACNGT 3 cut(s) 192, 409, 584
HpyCH4IV ACGT 1 cut(s) 180
HpyCH4V TGCA 5 cut(s) 299, 425, 469, 524, 600
HpyF10VI GCNNNNNNNGC 1 cut(s) 577
HpyF3I CTNAG 1 cut(s) 339
HpySE526I ACGT 1 cut(s) 180
Hsp92I GRCGYC 2 cut(s) 69, 378
Hsp92II CATG 6 cut(s) 20, 35, 277, 337, 479, 640
Kzo9I GATC 4 cut(s) 82, 238, 289, 664
LmnI GCTCC 1 cut(s) 445
Lsp1109I GCAGC 3 cut(s) 339, 406, 409
LweI GCATC 2 cut(s) 434, 642
MaeI CTAG 1 cut(s) 36
MaeII ACGT 1 cut(s) 180
MaeIII GTNAC 4 cut(s) 253, 342, 559, 623
MalI GATC 4 cut(s) 84, 240, 291, 666
MboI GATC 4 cut(s) 82, 238, 289, 664
MboII GAAGA 3 cut(s) 132, 299, 527
MluCI AATT 1 cut(s) 464
MlyI GAGTC 1 cut(s) 350
MnlI CCTC 6 cut(s) 70, 226, 366, 430, 505, 612
MseI TTAA 1 cut(s) 676
MslI CAYNNNNRTG 1 cut(s) 30
MspI CCGG 3 cut(s) 72, 117, 132
MspR9I CCNGG 6 cut(s) 73, 132, 133, 284, 349, 614
MvaI CCWGG 3 cut(s) 284, 349, 614
MwoI GCNNNNNNNGC 1 cut(s) 577
NciI CCSGG 3 cut(s) 73, 132, 133
NdeII GATC 4 cut(s) 82, 238, 289, 664
NlaIII CATG 6 cut(s) 20, 35, 277, 337, 479, 640
NlaIV GGNNCC 2 cut(s) 129, 414
NmuCI GTSAC 1 cut(s) 342
PfoI TCCNGGA 1 cut(s) 282
PkrI GCNGC 4 cut(s) 354, 421, 424, 644
PleI GAGTC 1 cut(s) 349
PpsI GAGTC 1 cut(s) 349
Psp1406I AACGTT 1 cut(s) 180
Psp6I CCWGG 3 cut(s) 282, 347, 612
PspEI GGTNACC 1 cut(s) 253
PspFI CCCAGC 1 cut(s) 510
PspGI CCWGG 3 cut(s) 282, 347, 612
PspN4I GGNNCC 2 cut(s) 129, 414
RsaI GTAC 1 cut(s) 189
RsaNI GTAC 1 cut(s) 188
RseI CAYNNNNRTG 1 cut(s) 30
SaqAI TTAA 1 cut(s) 676
SatI GCNGC 4 cut(s) 353, 420, 423, 643
Sau3AI GATC 4 cut(s) 82, 238, 289, 664
SchI GAGTC 1 cut(s) 350
ScrFI CCNGG 6 cut(s) 73, 132, 133, 284, 349, 614
SetI ASST 2 cut(s) 172, 183
SfaNI GCATC 2 cut(s) 434, 642
SfcI CTRYAG 1 cut(s) 198
SmaI CCCGGG 1 cut(s) 133
SmiMI CAYNNNNRTG 1 cut(s) 30
SmlI CTYRAG 2 cut(s) 149, 660
SmoI CTYRAG 2 cut(s) 149, 660
Sse9I AATT 1 cut(s) 464
SsiI CCGC 1 cut(s) 643
SspMI CTAG 1 cut(s) 36
StyD4I CCNGG 6 cut(s) 71, 130, 131, 282, 347, 612
TaaI ACNGT 3 cut(s) 192, 409, 584
TaiI ACGT 1 cut(s) 183
TaqI TCGA 2 cut(s) 390, 484
TasI AATT 1 cut(s) 464
TatI WGTACW 1 cut(s) 187
TauI GCSGC 1 cut(s) 645
Tru1I TTAA 1 cut(s) 676
Tru9I TTAA 1 cut(s) 676
TscAI CASTG 1 cut(s) 412
TseFI GTSAC 1 cut(s) 342
TseI GCWGC 3 cut(s) 352, 419, 422
Tsp45I GTSAC 1 cut(s) 342
TspDTI ATGAA 2 cut(s) 408, 421
TspGWI ACGGA 1 cut(s) 476
TspMI CCCGGG 1 cut(s) 131
TspRI CASTG 1 cut(s) 412
XmaI CCCGGG 1 cut(s) 131
XspI CTAG 1 cut(s) 36
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.