ubiquitin-protein transferase activity
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| RVT_3 | PF13456 | 29 - 150 | 4.7e-21 | Reverse transcriptase-like |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 87 |
| AclWI | GGATC | 1 cut(s) | 488 |
| AcsI | RAATTY | 1 cut(s) | 377 |
| AfaI | GTAC | 2 cut(s) | 384, 529 |
| AflIII | ACRYGT | 2 cut(s) | 190, 208 |
| AgsI | TTSAA | 2 cut(s) | 188, 281 |
| AluBI | AGCT | 9 cut(s) | 76, 98, 167, 217, 224, 331, 452, 491, 497 |
| AluI | AGCT | 9 cut(s) | 76, 98, 167, 217, 224, 331, 452, 491, 497 |
| Alw21I | GWGCWC | 1 cut(s) | 333 |
| AlwI | GGATC | 1 cut(s) | 488 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 391 |
| ApeKI | GCWGC | 4 cut(s) | 167, 217, 428, 443 |
| ApoI | RAATTY | 1 cut(s) | 377 |
| AspLEI | GCGC | 1 cut(s) | 433 |
| AsuHPI | GGTGA | 1 cut(s) | 51 |
| AsuNHI | GCTAGC | 1 cut(s) | 220 |
| BanII | GRGCYC | 1 cut(s) | 333 |
| Bbv12I | GWGCWC | 1 cut(s) | 333 |
| BbvI | GCAGC | 4 cut(s) | 154, 204, 430, 440 |
| BccI | CCATC | 3 cut(s) | 86, 146, 540 |
| BclI | TGATCA | 1 cut(s) | 138 |
| BfaI | CTAG | 3 cut(s) | 221, 356, 411 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 425 |
| BisI | GCNGC | 4 cut(s) | 168, 218, 429, 444 |
| BlsI | GCNGC | 4 cut(s) | 169, 219, 430, 445 |
| BmsI | GCATC | 2 cut(s) | 307, 499 |
| BmtI | GCTAGC | 1 cut(s) | 224 |
| BpmI | CTGGAG | 1 cut(s) | 477 |
| BpuEI | CTTGAG | 1 cut(s) | 456 |
| Bsa29I | ATCGAT | 1 cut(s) | 483 |
| BsaBI | GATNNNNATC | 1 cut(s) | 363 |
| Bse1I | ACTGG | 2 cut(s) | 62, 396 |
| Bse8I | GATNNNNATC | 1 cut(s) | 363 |
| BseCI | ATCGAT | 1 cut(s) | 483 |
| BseGI | GGATG | 1 cut(s) | 514 |
| BseJI | GATNNNNATC | 1 cut(s) | 363 |
| BseNI | ACTGG | 2 cut(s) | 62, 396 |
| BseXI | GCAGC | 4 cut(s) | 154, 204, 430, 440 |
| BsgI | GTGCAG | 1 cut(s) | 284 |
| BshVI | ATCGAT | 1 cut(s) | 483 |
| BsiHKAI | GWGCWC | 1 cut(s) | 333 |
| Bsp1286I | GDGCHC | 1 cut(s) | 333 |
| Bsp1407I | TGTACA | 1 cut(s) | 382 |
| Bsp143I | GATC | 3 cut(s) | 138, 480, 484 |
| BspDI | ATCGAT | 1 cut(s) | 483 |
| BspOI | GCTAGC | 1 cut(s) | 224 |
| BspPI | GGATC | 1 cut(s) | 488 |
| BsrGI | TGTACA | 1 cut(s) | 382 |
| BsrI | ACTGG | 2 cut(s) | 62, 396 |
| BssMI | GATC | 3 cut(s) | 138, 480, 484 |
| Bst4CI | ACNGT | 1 cut(s) | 184 |
| BstAUI | TGTACA | 1 cut(s) | 382 |
| BstC8I | GCNNGC | 2 cut(s) | 222, 441 |
| BstF5I | GGATG | 1 cut(s) | 514 |
| BstHHI | GCGC | 1 cut(s) | 433 |
| BstKTI | GATC | 3 cut(s) | 141, 483, 487 |
| BstMBI | GATC | 3 cut(s) | 138, 480, 484 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 425, 449 |
| BstNSI | RCATGY | 3 cut(s) | 194, 212, 344 |
| BstV1I | GCAGC | 4 cut(s) | 154, 204, 430, 440 |
| Bsu15I | ATCGAT | 1 cut(s) | 483 |
| BsuTUI | ATCGAT | 1 cut(s) | 483 |
| BtsCI | GGATG | 1 cut(s) | 514 |
| Cac8I | GCNNGC | 2 cut(s) | 222, 441 |
| CaiI | CAGNNNCTG | 1 cut(s) | 391 |
| CfoI | GCGC | 1 cut(s) | 433 |
| ClaI | ATCGAT | 1 cut(s) | 483 |
| Csp6I | GTAC | 2 cut(s) | 383, 528 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 100, 135 |
| CviAII | CATG | 3 cut(s) | 191, 209, 341 |
| CviQI | GTAC | 2 cut(s) | 383, 528 |
| DpnI | GATC | 3 cut(s) | 140, 482, 486 |
| DpnII | GATC | 3 cut(s) | 138, 480, 484 |
| Ecl136II | GAGCTC | 1 cut(s) | 331 |
| Eco24I | GRGCYC | 1 cut(s) | 333 |
| Eco53kI | GAGCTC | 1 cut(s) | 331 |
| EcoICRI | GAGCTC | 1 cut(s) | 331 |
| EcoT38I | GRGCYC | 1 cut(s) | 333 |
| FaeI | CATG | 3 cut(s) | 194, 212, 344 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 261, 293 |
| FatI | CATG | 3 cut(s) | 190, 208, 340 |
| FbaI | TGATCA | 1 cut(s) | 138 |
| Fnu4HI | GCNGC | 4 cut(s) | 168, 218, 429, 444 |
| FokI | GGATG | 1 cut(s) | 521 |
| FriOI | GRGCYC | 1 cut(s) | 333 |
| Fsp4HI | GCNGC | 4 cut(s) | 168, 218, 429, 444 |
| FspBI | CTAG | 3 cut(s) | 221, 356, 411 |
| GlaI | GCGC | 1 cut(s) | 432 |
| GluI | GCNGC | 4 cut(s) | 168, 218, 429, 444 |
| GsuI | CTGGAG | 1 cut(s) | 477 |
| HhaI | GCGC | 1 cut(s) | 433 |
| Hin1II | CATG | 3 cut(s) | 194, 212, 344 |
| Hin6I | GCGC | 1 cut(s) | 431 |
| HinP1I | GCGC | 1 cut(s) | 431 |
| HinfI | GANTC | 1 cut(s) | 458 |
| HphI | GGTGA | 1 cut(s) | 51 |
| Hpy188I | TCNGA | 3 cut(s) | 143, 230, 369 |
| Hpy188III | TCNNGA | 2 cut(s) | 278, 506 |
| HpyAV | CCTTC | 2 cut(s) | 117, 227 |
| HpyCH4III | ACNGT | 1 cut(s) | 184 |
| HpyCH4IV | ACGT | 1 cut(s) | 87 |
| HpyCH4V | TGCA | 2 cut(s) | 265, 320 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 425, 449 |
| HpySE526I | ACGT | 1 cut(s) | 87 |
| Hsp92II | CATG | 3 cut(s) | 194, 212, 344 |
| HspAI | GCGC | 1 cut(s) | 431 |
| Ksp22I | TGATCA | 1 cut(s) | 138 |
| Kzo9I | GATC | 3 cut(s) | 138, 480, 484 |
| LmnI | GCTCC | 3 cut(s) | 95, 412, 496 |
| LpnPI | CCDG | 7 cut(s) | 75, 251, 305, 371, 377, 491, 507 |
| Lsp1109I | GCAGC | 4 cut(s) | 154, 204, 430, 440 |
| LweI | GCATC | 2 cut(s) | 307, 499 |
| MaeI | CTAG | 3 cut(s) | 221, 356, 411 |
| MaeII | ACGT | 1 cut(s) | 87 |
| MaeIII | GTNAC | 3 cut(s) | 64, 284, 351 |
| MalI | GATC | 3 cut(s) | 140, 482, 486 |
| MboI | GATC | 3 cut(s) | 138, 480, 484 |
| MboII | GAAGA | 2 cut(s) | 156, 239 |
| MhlI | GDGCHC | 1 cut(s) | 333 |
| MluCI | AATT | 3 cut(s) | 237, 255, 377 |
| MnlI | CCTC | 3 cut(s) | 116, 208, 478 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 425, 449 |
| NdeII | GATC | 3 cut(s) | 138, 480, 484 |
| NheI | GCTAGC | 1 cut(s) | 220 |
| NlaIII | CATG | 3 cut(s) | 194, 212, 344 |
| NmuCI | GTSAC | 2 cut(s) | 64, 284 |
| NspI | RCATGY | 3 cut(s) | 194, 212, 344 |
| PciI | ACATGT | 2 cut(s) | 190, 208 |
| PfeI | GAWTC | 1 cut(s) | 458 |
| PkrI | GCNGC | 4 cut(s) | 169, 219, 430, 445 |
| PscI | ACATGT | 2 cut(s) | 190, 208 |
| Psp124BI | GAGCTC | 1 cut(s) | 333 |
| Psp1406I | AACGTT | 1 cut(s) | 87 |
| PstNI | CAGNNNCTG | 1 cut(s) | 391 |
| RsaI | GTAC | 2 cut(s) | 384, 529 |
| RsaNI | GTAC | 2 cut(s) | 383, 528 |
| SacI | GAGCTC | 1 cut(s) | 333 |
| SatI | GCNGC | 4 cut(s) | 168, 218, 429, 444 |
| Sau3AI | GATC | 3 cut(s) | 138, 480, 484 |
| SduI | GDGCHC | 1 cut(s) | 333 |
| SfaNI | GCATC | 2 cut(s) | 307, 499 |
| SmlI | CTYRAG | 1 cut(s) | 471 |
| SmoI | CTYRAG | 1 cut(s) | 471 |
| Sse9I | AATT | 3 cut(s) | 237, 255, 377 |
| SspI | AATATT | 1 cut(s) | 50 |
| SspMI | CTAG | 3 cut(s) | 221, 356, 411 |
| SstI | GAGCTC | 1 cut(s) | 333 |
| TaaI | ACNGT | 1 cut(s) | 184 |
| TaiI | ACGT | 1 cut(s) | 90 |
| TaqI | TCGA | 1 cut(s) | 483 |
| TasI | AATT | 3 cut(s) | 237, 255, 377 |
| TatI | WGTACW | 1 cut(s) | 382 |
| TfiI | GAWTC | 1 cut(s) | 458 |
| TseFI | GTSAC | 2 cut(s) | 64, 284 |
| TseI | GCWGC | 4 cut(s) | 167, 217, 428, 443 |
| Tsp45I | GTSAC | 2 cut(s) | 64, 284 |
| TspDTI | ATGAA | 1 cut(s) | 351 |
| XapI | RAATTY | 1 cut(s) | 377 |
| XceI | RCATGY | 3 cut(s) | 194, 212, 344 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 48 |
| XspI | CTAG | 3 cut(s) | 221, 356, 411 |