RchiOBHm_Chr7g0194201

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000056
Physical Location & Seq
Reverse (-)
12349530 .. 12350348
819 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ17367

Sequence Viewer

Length: 819 bp
ATGGCCCCCCCAACAGTCATAAGCCGAGCACTGGGTTTTTTCCTTCTCTCTGATGTCAAACGATTCTCGGAAAGGCCAAGGTACTCGGAGTTCATGGCTAAGAAACTCTCCAGTATACGTGTCCCAGAAGATGAGCAAGCAGCTGTTATTGAAAAACTATTTCGGGTGGTTGAAGTGGCTATCCCCGAGAATGCTATTGTTGTGTCTGTGTTCGATGTTACTCTCCGCTTCTTGGATAGTACAAGTGATCTTGGCCCTGAGGGTCTGAATCTGATCTTATGGGGACCTACAGTAACTTTTCAGGATGATGATCCAATTATCACTGATAGGGATCCGATGGAATCCATGGAAGCATATGAGCCCAAGCTTATTCCCGCAACTAAATCATTCATTGAGGGCTTGGAGAAAGTGAGATTTGATAGTTTGGAAACTAGTATTAGACAGATGCCATGTGCTATTTGTTGGGAATGCCTTTATCACTTTGCTGTAGAACAAGGGACTGATCAGCAGCTGATAATCAATCGCTTGCCCTGCTCACATCTTTATCATGGAGACTGTATTATCCAGTGGCTTGAGAGGAATAACTTGTATCCTATGTGCCGATACGCAATGCCTACTGTGGAAGTGGAAGCGGGCGAACCATCAAACCCTTCAAGGCGGCGGCATTGGGATTTGATCATGATGTCTGCGGGTGGTATACTAACTACGGCTACTTGCATTGGTTTGCAGATTATTGAGGCAAAGTTCAAGATGAAAATATCAGATTATCTTATATATGTTGTGCCATTGGTAGCCATGTATTCTTCAAAGCTTCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

272

Amino Acids

30.95

Weight (kDa)

5.07

Isoelectric Point (pI)

52.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 151 - 201 1e-06 RING-H2 zinc finger domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 115, 697
AciI CCGC 6 cut(s) 226, 375, 632, 658, 661, 689
AclWI GGATC 3 cut(s) 305, 326, 339
AfaI GTAC 2 cut(s) 83, 241
AfiI CCNNNNNNNGG 2 cut(s) 31, 232
AflIII ACRYGT 1 cut(s) 118
AgsI TTSAA 5 cut(s) 152, 173, 654, 748, 807
AhlI ACTAGT 1 cut(s) 431
AluBI AGCT 4 cut(s) 143, 367, 511, 811
AluI AGCT 4 cut(s) 143, 367, 511, 811
Alw21I GWGCWC 1 cut(s) 31
Alw26I GTCTC 1 cut(s) 546
AlwI GGATC 3 cut(s) 305, 326, 339
AlwNI CAGNNNCTG 1 cut(s) 511
Ama87I CYCGRG 1 cut(s) 185
AoxI GGCC 3 cut(s) 3, 74, 253
ApeKI GCWGC 2 cut(s) 140, 508
AspS9I GGNCC 3 cut(s) 4, 254, 284
AvaI CYCGRG 1 cut(s) 185
AvaII GGWCC 1 cut(s) 284
AxyI CCTNAGG 1 cut(s) 258
BamHI GGATCC 1 cut(s) 331
BanII GRGCYC 1 cut(s) 363
Bbv12I GWGCWC 1 cut(s) 31
BbvI GCAGC 2 cut(s) 152, 520
BccI CCATC 2 cut(s) 331, 649
BceAI ACGGC 1 cut(s) 723
BciVI GTATCC 1 cut(s) 600
BclI TGATCA 2 cut(s) 502, 675
BcoDI GTCTC 1 cut(s) 546
BcuI ACTAGT 1 cut(s) 431
BfaI CTAG 1 cut(s) 432
BfmI CTRYAG 2 cut(s) 288, 486
BfuI GTATCC 1 cut(s) 600
BisI GCNGC 4 cut(s) 141, 509, 659, 662
BlsI GCNGC 4 cut(s) 142, 510, 660, 663
Bme18I GGWCC 1 cut(s) 284
BmeT110I CYCGRG 1 cut(s) 185
BmgT120I GGNCC 3 cut(s) 4, 254, 284
BmiI GGNNCC 3 cut(s) 6, 285, 333
BmrI ACTGGG 1 cut(s) 41
BmsI GCATC 1 cut(s) 435
BmuI ACTGGG 1 cut(s) 41
BpmI CTGGAG 1 cut(s) 94
BpuEI CTTGAG 1 cut(s) 593
BsaAI YACGTR 1 cut(s) 119
BsaBI GATNNNNATC 2 cut(s) 309, 330
BsaJI CCNNGG 2 cut(s) 77, 345
Bsc4I CCNNNNNNNGG 2 cut(s) 31, 232
Bse1I ACTGG 3 cut(s) 36, 111, 565
Bse21I CCTNAGG 1 cut(s) 258
Bse3DI GCAATG 1 cut(s) 615
Bse8I GATNNNNATC 2 cut(s) 309, 330
BseDI CCNNGG 2 cut(s) 77, 345
BseGI GGATG 1 cut(s) 310
BseJI GATNNNNATC 2 cut(s) 309, 330
BseLI CCNNNNNNNGG 2 cut(s) 31, 232
BseMI GCAATG 1 cut(s) 615
BseMII CTCAG 1 cut(s) 249
BseNI ACTGG 3 cut(s) 36, 111, 565
BseXI GCAGC 2 cut(s) 152, 520
BshFI GGCC 3 cut(s) 5, 76, 255
BsiHKAI GWGCWC 1 cut(s) 31
BsiHKCI CYCGRG 1 cut(s) 185
BslFI GGGAC 3 cut(s) 107, 297, 511
BslI CCNNNNNNNGG 2 cut(s) 31, 232
BsmAI GTCTC 1 cut(s) 546
BsmFI GGGAC 3 cut(s) 107, 297, 511
BsmI GAATGC 2 cut(s) 196, 473
BsnI GGCC 3 cut(s) 5, 76, 255
BsoBI CYCGRG 1 cut(s) 185
Bsp1286I GDGCHC 2 cut(s) 31, 363
Bsp143I GATC 6 cut(s) 247, 273, 310, 331, 502, 675
Bsp19I CCATGG 1 cut(s) 345
BspACI CCGC 6 cut(s) 226, 375, 632, 658, 661, 689
BspANI GGCC 3 cut(s) 5, 76, 255
BspCNI CTCAG 1 cut(s) 250
BspHI TCATGA 1 cut(s) 678
BspLI GGNNCC 3 cut(s) 6, 285, 333
BspPI GGATC 3 cut(s) 305, 326, 339
BsrDI GCAATG 1 cut(s) 615
BsrI ACTGG 3 cut(s) 36, 111, 565
BssECI CCNNGG 2 cut(s) 77, 345
BssMI GATC 6 cut(s) 247, 273, 310, 331, 502, 675
BssNAI GTATAC 2 cut(s) 116, 698
BssT1I CCWWGG 2 cut(s) 77, 345
Bst1107I GTATAC 2 cut(s) 116, 698
Bst4CI ACNGT 4 cut(s) 16, 292, 557, 619
BstBAI YACGTR 1 cut(s) 119
BstC8I GCNNGC 3 cut(s) 138, 527, 634
BstDEI CTNAG 2 cut(s) 99, 258
BstDSI CCRYGG 1 cut(s) 345
BstF5I GGATG 1 cut(s) 310
BstKTI GATC 6 cut(s) 250, 276, 313, 334, 505, 678
BstMAI GTCTC 1 cut(s) 546
BstMBI GATC 6 cut(s) 247, 273, 310, 331, 502, 675
BstMWI GCNNNNNNNGC 1 cut(s) 531
BstSFI CTRYAG 2 cut(s) 288, 486
BstV1I GCAGC 2 cut(s) 152, 520
BstX2I RGATCY 1 cut(s) 331
BstYI RGATCY 1 cut(s) 331
BstZ17I GTATAC 2 cut(s) 116, 698
Bsu36I CCTNAGG 1 cut(s) 258
BsuI GTATCC 1 cut(s) 600
BsuRI GGCC 3 cut(s) 5, 76, 255
BtgI CCRYGG 1 cut(s) 345
BtsCI GGATG 1 cut(s) 310
BtsIMutI CAGTG 3 cut(s) 29, 321, 572
Cac8I GCNNGC 3 cut(s) 138, 527, 634
CaiI CAGNNNCTG 1 cut(s) 511
CciI TCATGA 1 cut(s) 678
Cfr13I GGNCC 3 cut(s) 4, 254, 284
Csp6I GTAC 2 cut(s) 82, 240
CviAII CATG 6 cut(s) 94, 346, 450, 548, 679, 796
CviQI GTAC 2 cut(s) 82, 240
DdeI CTNAG 2 cut(s) 99, 258
DpnI GATC 6 cut(s) 249, 275, 312, 333, 504, 677
DpnII GATC 6 cut(s) 247, 273, 310, 331, 502, 675
Eco130I CCWWGG 2 cut(s) 77, 345
Eco24I GRGCYC 1 cut(s) 363
Eco47I GGWCC 1 cut(s) 284
Eco81I CCTNAGG 1 cut(s) 258
Eco88I CYCGRG 1 cut(s) 185
EcoO109I RGGNCCY 1 cut(s) 284
EcoT14I CCWWGG 2 cut(s) 77, 345
EcoT38I GRGCYC 1 cut(s) 363
ErhI CCWWGG 2 cut(s) 77, 345
FaeI CATG 6 cut(s) 97, 349, 453, 551, 682, 799
FaqI GGGAC 3 cut(s) 107, 297, 511
FatI CATG 6 cut(s) 93, 345, 449, 547, 678, 795
FauI CCCGC 3 cut(s) 382, 625, 682
FauNDI CATATG 1 cut(s) 355
FbaI TGATCA 2 cut(s) 502, 675
FblI GTMKAC 2 cut(s) 115, 697
Fnu4HI GCNGC 4 cut(s) 141, 509, 659, 662
FokI GGATG 1 cut(s) 317
FriOI GRGCYC 1 cut(s) 363
Fsp4HI GCNGC 4 cut(s) 141, 509, 659, 662
FspBI CTAG 1 cut(s) 432
GluI GCNGC 4 cut(s) 141, 509, 659, 662
GsuI CTGGAG 1 cut(s) 94
HaeIII GGCC 3 cut(s) 5, 76, 255
Hin1II CATG 6 cut(s) 97, 349, 453, 551, 682, 799
HindIII AAGCTT 2 cut(s) 365, 809
HinfI GANTC 3 cut(s) 63, 268, 341
Hpy166II GTNNAC 2 cut(s) 116, 698
Hpy188I TCNGA 7 cut(s) 52, 70, 88, 267, 273, 336, 763
Hpy188III TCNNGA 3 cut(s) 302, 679, 748
Hpy8I GTNNAC 2 cut(s) 116, 698
HpyAV CCTTC 2 cut(s) 53, 660
HpyCH4III ACNGT 4 cut(s) 16, 292, 557, 619
HpyCH4IV ACGT 1 cut(s) 118
HpyCH4V TGCA 2 cut(s) 717, 727
HpyF10VI GCNNNNNNNGC 1 cut(s) 531
HpyF3I CTNAG 2 cut(s) 99, 258
HpySE526I ACGT 1 cut(s) 118
Hsp92II CATG 6 cut(s) 97, 349, 453, 551, 682, 799
Ksp22I TGATCA 2 cut(s) 502, 675
Kzo9I GATC 6 cut(s) 247, 273, 310, 331, 502, 675
LpnPI CCDG 7 cut(s) 17, 124, 138, 270, 287, 544, 578
Lsp1109I GCAGC 2 cut(s) 152, 520
LweI GCATC 1 cut(s) 435
MaeI CTAG 1 cut(s) 432
MaeII ACGT 1 cut(s) 118
MaeIII GTNAC 2 cut(s) 217, 292
MalI GATC 6 cut(s) 249, 275, 312, 333, 504, 677
MboI GATC 6 cut(s) 247, 273, 310, 331, 502, 675
MboII GAAGA 2 cut(s) 140, 795
MflI RGATCY 1 cut(s) 331
MhlI GDGCHC 2 cut(s) 31, 363
MluCI AATT 1 cut(s) 315
MnlI CCTC 4 cut(s) 253, 388, 570, 730
MspA1I CMGCKG 2 cut(s) 143, 511
Mva1269I GAATGC 2 cut(s) 196, 473
MwoI GCNNNNNNNGC 1 cut(s) 531
NcoI CCATGG 1 cut(s) 345
NdeI CATATG 1 cut(s) 355
NdeII GATC 6 cut(s) 247, 273, 310, 331, 502, 675
NlaIII CATG 6 cut(s) 97, 349, 453, 551, 682, 799
NlaIV GGNNCC 3 cut(s) 6, 285, 333
NmeAIII GCCGAG 1 cut(s) 50
PagI TCATGA 1 cut(s) 678
PctI GAATGC 2 cut(s) 196, 473
PfeI GAWTC 3 cut(s) 63, 268, 341
PkrI GCNGC 4 cut(s) 142, 510, 660, 663
Ppu21I YACGTR 1 cut(s) 119
PpuMI RGGWCCY 1 cut(s) 284
Psp5II RGGWCCY 1 cut(s) 284
PspN4I GGNNCC 3 cut(s) 6, 285, 333
PspPI GGNCC 3 cut(s) 4, 254, 284
PspPPI RGGWCCY 1 cut(s) 284
PsrI GAACNNNNNNTAC 2 cut(s) 74, 106
PstNI CAGNNNCTG 1 cut(s) 511
PsuI RGATCY 1 cut(s) 331
PvuII CAGCTG 2 cut(s) 143, 511
RsaI GTAC 2 cut(s) 83, 241
RsaNI GTAC 2 cut(s) 82, 240
SatI GCNGC 4 cut(s) 141, 509, 659, 662
Sau3AI GATC 6 cut(s) 247, 273, 310, 331, 502, 675
Sau96I GGNCC 3 cut(s) 4, 254, 284
SduI GDGCHC 2 cut(s) 31, 363
SetI ASST 7 cut(s) 83, 121, 145, 289, 369, 513, 813
SfaNI GCATC 1 cut(s) 435
SfcI CTRYAG 2 cut(s) 288, 486
SinI GGWCC 1 cut(s) 284
SmlI CTYRAG 1 cut(s) 572
SmoI CTYRAG 1 cut(s) 572
SpeI ACTAGT 1 cut(s) 431
Sse9I AATT 1 cut(s) 315
SsiI CCGC 6 cut(s) 226, 375, 632, 658, 661, 689
SspMI CTAG 1 cut(s) 432
StyI CCWWGG 2 cut(s) 77, 345
TaaI ACNGT 4 cut(s) 16, 292, 557, 619
TaiI ACGT 1 cut(s) 121
TaqI TCGA 1 cut(s) 213
TasI AATT 1 cut(s) 315
TatI WGTACW 1 cut(s) 239
TauI GCSGC 2 cut(s) 661, 664
TfiI GAWTC 3 cut(s) 63, 268, 341
TscAI CASTG 3 cut(s) 36, 328, 572
TseI GCWGC 2 cut(s) 140, 508
TspDTI ATGAA 3 cut(s) 82, 379, 767
TspRI CASTG 3 cut(s) 36, 328, 572
VpaK11BI GGWCC 1 cut(s) 284
XmiI GTMKAC 2 cut(s) 115, 697
XspI CTAG 1 cut(s) 432
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.