Rw4G032320

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000056
Physical Location & Seq
Reverse (-)
59482395 .. 59487576
5182 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G032320.1

Sequence Viewer

Length: 759 bp
ATGGAGGTATTTTACTATCATCACAGAGCGGTGCAAAAAAGGGTAACCCAGCTCATAGGCTCATGGGAGGAGGACAAGCTGTTCATCAGATTGAAGTTCTACAAGTGCAGCGGATGGCACTGTGTGGAAAGCGATCGAATCGTTCATGATTACATTACTAAAATAGCCCAAATAGAATTTTGGGTAAAGTTTTCTCATTTCAAGCACCAATTATCAGACAACTACGATAGTAACAGGGAGTACGAAACTCTCATCTGCGAGTATCTGAGGAGTATGGGTGTGCCGGAAGATGAACATCCTGCTGTTGTTGACAAGCTATTCCGGGTGGTTGAGGCTGCCGTTTCCCCTGTGGACGCTATTGTAGTGTTTGCGTGGGACGCCATTTACCGCGTCGGAGATGGACATGAACCATATAGGCCCAATGGGATTCCTGCGAGCAGATCATCAATCCAGGCCAACGACATCTGCAAGGGATCGAAGAGGCAAACGATCAATGACGACGATGTTTTGAAGGCGTTGGAGGACATTGAGTTTCCCGAGTTCATCGAGCCTCTGAAGGCCTCTCTTGAAGGGCTGAGGGAGAAGAATGCTGGGAAGAAGGCAGGAACATCAAAGGCAAAGGAAGCGAAAACAAAAGAGGCGAAAACAAAGGAAGTGAAAAAGAAGAGGAAATTGGAAGAGCCGCCGCCCAAGGAAGAGGAAGAAAACCAAGATGAGGATGGGGGCGACAGCGCTAGCGAAAGCTTGAGCAAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

252

Amino Acids

28.98

Weight (kDa)

5.62

Isoelectric Point (pI)

45.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 29
AccII CGCG 1 cut(s) 390
AciI CCGC 5 cut(s) 29, 111, 388, 683, 686
AclWI GGATC 1 cut(s) 481
AcsI RAATTY 1 cut(s) 176
AcuI CTGAAG 1 cut(s) 575
AcyI GRCGYC 1 cut(s) 378
AdeI CACNNNGTG 1 cut(s) 124
AfaI GTAC 1 cut(s) 242
AfeI AGCGCT 1 cut(s) 733
AfiI CCNNNNNNNGG 1 cut(s) 715
AgsI TTSAA 4 cut(s) 94, 202, 511, 569
AjnI CCWGG 1 cut(s) 450
AjuI GAANNNNNNNTTGG 2 cut(s) 656, 688
AloI GAACNNNNNNTCC 2 cut(s) 65, 97
AluBI AGCT 4 cut(s) 52, 79, 316, 744
AluI AGCT 4 cut(s) 52, 79, 316, 744
AlwI GGATC 1 cut(s) 481
Ama87I CYCGRG 1 cut(s) 536
Aor51HI AGCGCT 1 cut(s) 733
AoxI GGCC 3 cut(s) 416, 453, 558
ApeKI GCWGC 2 cut(s) 108, 335
ApoI RAATTY 1 cut(s) 176
AspLEI GCGC 1 cut(s) 734
AspS9I GGNCC 1 cut(s) 417
AsuC2I CCSGG 1 cut(s) 323
AsuNHI GCTAGC 1 cut(s) 734
AvaI CYCGRG 1 cut(s) 536
BbvCI CCTCAGC 1 cut(s) 575
BbvI GCAGC 2 cut(s) 120, 322
BccI CCATC 3 cut(s) 108, 392, 713
BceAI ACGGC 1 cut(s) 323
BciT130I CCWGG 1 cut(s) 452
BcnI CCSGG 1 cut(s) 323
BfaI CTAG 1 cut(s) 735
BfoI RGCGCY 1 cut(s) 735
BisI GCNGC 4 cut(s) 109, 336, 683, 686
BlsI GCNGC 4 cut(s) 110, 337, 684, 687
Bme1390I CCNGG 2 cut(s) 323, 452
BmeT110I CYCGRG 1 cut(s) 536
BmgT120I GGNCC 1 cut(s) 417
BmrFI CCNGG 2 cut(s) 323, 452
BmtI GCTAGC 1 cut(s) 738
Bpu10I CCTNAGC 1 cut(s) 575
BpuMI CCSGG 1 cut(s) 323
BsaBI GATNNNNATC 1 cut(s) 294
BsaHI GRCGYC 1 cut(s) 378
BsaJI CCNNGG 1 cut(s) 690
BsaXI ACNNNNNCTCC 2 cut(s) 262, 292
Bsc4I CCNNNNNNNGG 1 cut(s) 715
Bse8I GATNNNNATC 1 cut(s) 294
BseBI CCWGG 1 cut(s) 452
BseDI CCNNGG 1 cut(s) 690
BseGI GGATG 3 cut(s) 119, 295, 724
BseJI GATNNNNATC 1 cut(s) 294
BseLI CCNNNNNNNGG 1 cut(s) 715
BseMII CTCAG 2 cut(s) 257, 566
BseRI GAGGAG 2 cut(s) 83, 283
BseXI GCAGC 2 cut(s) 120, 322
BseYI CCCAGC 2 cut(s) 48, 590
BsgI GTGCAG 1 cut(s) 127
Bsh1236I CGCG 1 cut(s) 390
Bsh1285I CGRYCG 1 cut(s) 136
BshFI GGCC 3 cut(s) 418, 455, 560
BsiEI CGRYCG 1 cut(s) 136
BsiHKCI CYCGRG 1 cut(s) 536
BsiSI CCGG 2 cut(s) 284, 322
BslFI GGGAC 1 cut(s) 389
BslI CCNNNNNNNGG 1 cut(s) 715
BsmFI GGGAC 1 cut(s) 389
BsmI GAATGC 1 cut(s) 592
BsnI GGCC 3 cut(s) 418, 455, 560
BsoBI CYCGRG 1 cut(s) 536
Bsp143I GATC 4 cut(s) 133, 440, 473, 489
BspACI CCGC 5 cut(s) 29, 111, 388, 683, 686
BspANI GGCC 3 cut(s) 418, 455, 560
BspCNI CTCAG 2 cut(s) 258, 567
BspFNI CGCG 1 cut(s) 390
BspHI TCATGA 1 cut(s) 145
BspOI GCTAGC 1 cut(s) 738
BspPI GGATC 1 cut(s) 481
BspQI GCTCTTC 1 cut(s) 672
BsrBI CCGCTC 1 cut(s) 29
BssECI CCNNGG 1 cut(s) 690
BssMI GATC 4 cut(s) 133, 440, 473, 489
BssNI GRCGYC 1 cut(s) 378
BssT1I CCWWGG 1 cut(s) 690
Bst2UI CCWGG 1 cut(s) 452
Bst4CI ACNGT 1 cut(s) 122
Bst6I CTCTTC 4 cut(s) 473, 659, 672, 690
BstACI GRCGYC 1 cut(s) 378
BstC8I GCNNGC 2 cut(s) 436, 736
BstDEI CTNAG 2 cut(s) 266, 575
BstEII GGTNACC 1 cut(s) 43
BstF5I GGATG 3 cut(s) 119, 295, 724
BstFNI CGCG 1 cut(s) 390
BstH2I RGCGCY 1 cut(s) 735
BstHHI GCGC 1 cut(s) 734
BstKTI GATC 4 cut(s) 136, 443, 476, 492
BstMBI GATC 4 cut(s) 133, 440, 473, 489
BstMCI CGRYCG 1 cut(s) 136
BstMWI GCNNNNNNNGC 2 cut(s) 377, 623
BstNI CCWGG 1 cut(s) 452
BstPI GGTNACC 1 cut(s) 43
BstSCI CCNGG 2 cut(s) 321, 450
BstUI CGCG 1 cut(s) 390
BstV1I GCAGC 2 cut(s) 120, 322
BsuRI GGCC 3 cut(s) 418, 455, 560
BtsCI GGATG 3 cut(s) 119, 295, 724
BtsIMutI CAGTG 1 cut(s) 118
Cac8I GCNNGC 2 cut(s) 436, 736
CciI TCATGA 1 cut(s) 145
CfoI GCGC 1 cut(s) 734
Cfr13I GGNCC 1 cut(s) 417
CseI GACGC 3 cut(s) 362, 379, 386
Csp6I GTAC 1 cut(s) 241
CviAII CATG 3 cut(s) 63, 146, 404
CviQI GTAC 1 cut(s) 241
DdeI CTNAG 2 cut(s) 266, 575
DpnI GATC 4 cut(s) 135, 442, 475, 491
DpnII GATC 4 cut(s) 133, 440, 473, 489
DraIII CACNNNGTG 1 cut(s) 124
Eam1104I CTCTTC 4 cut(s) 473, 659, 672, 690
EarI CTCTTC 4 cut(s) 473, 659, 672, 690
Eco130I CCWWGG 1 cut(s) 690
Eco147I AGGCCT 1 cut(s) 560
Eco47III AGCGCT 1 cut(s) 733
Eco57I CTGAAG 1 cut(s) 575
Eco88I CYCGRG 1 cut(s) 536
Eco91I GGTNACC 1 cut(s) 43
EcoO65I GGTNACC 1 cut(s) 43
EcoRII CCWGG 1 cut(s) 450
EcoT14I CCWWGG 1 cut(s) 690
ErhI CCWWGG 1 cut(s) 690
FaeI CATG 3 cut(s) 66, 149, 407
FaiI YATR 7 cut(s) 56, 64, 147, 275, 405, 412, 414
FaqI GGGAC 1 cut(s) 389
FatI CATG 3 cut(s) 62, 145, 403
Fnu4HI GCNGC 4 cut(s) 109, 336, 683, 686
FokI GGATG 3 cut(s) 126, 282, 731
Fsp4HI GCNGC 4 cut(s) 109, 336, 683, 686
FspBI CTAG 1 cut(s) 735
GlaI GCGC 1 cut(s) 733
GluI GCNGC 4 cut(s) 109, 336, 683, 686
GsaI CCCAGC 2 cut(s) 52, 594
HaeII RGCGCY 1 cut(s) 735
HaeIII GGCC 3 cut(s) 418, 455, 560
HapII CCGG 2 cut(s) 284, 322
HgaI GACGC 3 cut(s) 362, 379, 386
HhaI GCGC 1 cut(s) 734
Hin1I GRCGYC 1 cut(s) 378
Hin1II CATG 3 cut(s) 66, 149, 407
Hin6I GCGC 1 cut(s) 732
HinP1I GCGC 1 cut(s) 732
HincII GTYRAC 1 cut(s) 310
HindII GTYRAC 1 cut(s) 310
HindIII AAGCTT 1 cut(s) 742
HinfI GANTC 2 cut(s) 138, 427
HpaII CCGG 2 cut(s) 284, 322
Hpy166II GTNNAC 2 cut(s) 310, 352
Hpy188I TCNGA 5 cut(s) 89, 217, 267, 395, 555
Hpy188III TCNNGA 3 cut(s) 146, 536, 566
Hpy8I GTNNAC 2 cut(s) 310, 352
Hpy99I CGWCG 2 cut(s) 395, 503
HpyAV CCTTC 4 cut(s) 505, 550, 563, 592
HpyCH4III ACNGT 1 cut(s) 122
HpyCH4V TGCA 3 cut(s) 34, 108, 468
HpyF10VI GCNNNNNNNGC 2 cut(s) 377, 623
HpyF3I CTNAG 2 cut(s) 266, 575
Hsp92I GRCGYC 1 cut(s) 378
Hsp92II CATG 3 cut(s) 66, 149, 407
HspAI GCGC 1 cut(s) 732
Kzo9I GATC 4 cut(s) 133, 440, 473, 489
LguI GCTCTTC 1 cut(s) 672
Lsp1109I GCAGC 2 cut(s) 120, 322
MaeI CTAG 1 cut(s) 735
MaeIII GTNAC 2 cut(s) 43, 230
MalI GATC 4 cut(s) 135, 442, 475, 491
MbiI CCGCTC 1 cut(s) 29
MboI GATC 4 cut(s) 133, 440, 473, 489
MboII GAAGA 8 cut(s) 299, 490, 595, 607, 676, 689, 707, 713
MluCI AATT 3 cut(s) 176, 209, 671
MmeI TCCRAC 2 cut(s) 373, 498
MspA1I CMGCKG 1 cut(s) 111
MspI CCGG 2 cut(s) 284, 322
MspR9I CCNGG 2 cut(s) 323, 452
Mva1269I GAATGC 1 cut(s) 592
MvaI CCWGG 1 cut(s) 452
MvnI CGCG 1 cut(s) 390
MwoI GCNNNNNNNGC 2 cut(s) 377, 623
NciI CCSGG 1 cut(s) 323
NdeII GATC 4 cut(s) 133, 440, 473, 489
NheI GCTAGC 1 cut(s) 734
NlaIII CATG 3 cut(s) 66, 149, 407
PagI TCATGA 1 cut(s) 145
PceI AGGCCT 1 cut(s) 560
PciSI GCTCTTC 1 cut(s) 672
PctI GAATGC 1 cut(s) 592
PfeI GAWTC 2 cut(s) 138, 427
PkrI GCNGC 4 cut(s) 110, 337, 684, 687
Ple19I CGATCG 1 cut(s) 136
Psp6I CCWGG 1 cut(s) 450
PspEI GGTNACC 1 cut(s) 43
PspFI CCCAGC 2 cut(s) 48, 590
PspGI CCWGG 1 cut(s) 450
PspPI GGNCC 1 cut(s) 417
PvuI CGATCG 1 cut(s) 136
RsaI GTAC 1 cut(s) 242
RsaNI GTAC 1 cut(s) 241
SapI GCTCTTC 1 cut(s) 672
SatI GCNGC 4 cut(s) 109, 336, 683, 686
Sau3AI GATC 4 cut(s) 133, 440, 473, 489
Sau96I GGNCC 1 cut(s) 417
ScrFI CCNGG 2 cut(s) 323, 452
SetI ASST 5 cut(s) 9, 54, 81, 318, 746
SmlI CTYRAG 1 cut(s) 745
SmoI CTYRAG 1 cut(s) 745
Sse9I AATT 3 cut(s) 176, 209, 671
SseBI AGGCCT 1 cut(s) 560
SsiI CCGC 5 cut(s) 29, 111, 388, 683, 686
SspMI CTAG 1 cut(s) 735
StuI AGGCCT 1 cut(s) 560
StyD4I CCNGG 2 cut(s) 321, 450
StyI CCWWGG 1 cut(s) 690
TaaI ACNGT 1 cut(s) 122
TaqI TCGA 3 cut(s) 136, 476, 546
TasI AATT 3 cut(s) 176, 209, 671
TauI GCSGC 2 cut(s) 685, 688
TfiI GAWTC 2 cut(s) 138, 427
TscAI CASTG 1 cut(s) 125
TseI GCWGC 2 cut(s) 108, 335
TspDTI ATGAA 5 cut(s) 73, 134, 306, 420, 532
TspRI CASTG 1 cut(s) 125
XapI RAATTY 1 cut(s) 176
XcmI CCANNNNNNNNNTGG 1 cut(s) 716
XspI CTAG 1 cut(s) 735
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.