FvH4_4g33620

E3 ubiquitin-protein ligase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000056
Physical Location & Seq
Reverse (-)
31803307 .. 31804970
1664 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g33620.t1

Sequence Viewer

Length: 768 bp
ATGGATACCATGTTTTTCTATATCCACAAAGCGGTGCAAAGAAGGGCAGTTGGGCTGATAGGCTCATGCGAGGAGGACAAGATGTTCATCAGTTTGAATCTGTACAAGTCCACCGGACGGCACCGTGTGAACAGCTCTCCAATCATTTTGGATCACATTGCTAAAATAGCCCAAGCAGATTTTCCGGTAAAGTTTTCTCGTCTCAAGCAGCAATTGTGTGACAACAACAAGGACACTAACAGTGAGTATGAAAAGCTGATATGCGAGCATCTGAACAACATTGGTGTGCGGGAAGCTGAGCATCCTGCTATTCTTCACAAGATATTCCAAGTTGTTGAGGCTGCCGTCTCCCCAGTCGACGCTGTTGTAGTGCTTGTGTCTGAGCTCACTGTGAGCGAACGGAATGCGATTCCTGCGAGCAGAACAGCCATCCAGGGCTTGGAGCGAGTGACAGTAATTGATATCGATGGCAGCAGTCATACCAGCTGTTCTATATGTTTGGAGGATTTTGAACACCAAGAACCCATTACTCGGTTGCCCTGCACACACCATTTTCATATCAACTGCATTGTTCAGTGGCTGGAGGTTGACCACCTGTGTCCCCTTTGCCGATATCCGATGCCGATAGAAGAACTTCAGTTAATAATCCCTGCAAATCACTCTTTTCGGAGCTCTGTATGTGTTCGGATCATTGTTCTCTGTGTTTTGTTGGGTATTTTGTTGGGTCTGATGATTGCTTTGTTCTTTTTATTCACCGCTGGCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

256

Amino Acids

28.73

Weight (kDa)

6.09

Isoelectric Point (pI)

50.17

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 162 - 204 3.4e-13 Ring finger domain
zf-rbx1 PF12678 162 - 204 1.4e-06 RING-H2 zinc finger domain
zf-RING_11 PF17123 163 - 190 2.9e-09 RING-like zinc finger
zf-C3HC4_2 PF13923 163 - 203 5.2e-07 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 163 - 203 2.3e-06 Zinc finger, C3HC4 type (RING finger)
zf-RING_UBOX PF13445 163 - 201 4e-06 RING-type zinc-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 120
AccB7I CCANNNNNTGG 1 cut(s) 439
AccI GTMKAC 1 cut(s) 357
AciI CCGC 3 cut(s) 32, 289, 756
AclWI GGATC 2 cut(s) 159, 695
AcuI CTGAAG 1 cut(s) 620
AdeI CACNNNGTG 1 cut(s) 127
AfaI GTAC 1 cut(s) 104
AfiI CCNNNNNNNGG 4 cut(s) 31, 117, 439, 531
AgsI TTSAA 2 cut(s) 97, 512
AjnI CCWGG 1 cut(s) 432
AjuI GAANNNNNNNTTGG 2 cut(s) 165, 197
AloI GAACNNNNNNTCC 2 cut(s) 68, 100
AluBI AGCT 6 cut(s) 135, 256, 296, 385, 486, 672
AluI AGCT 6 cut(s) 135, 256, 296, 385, 486, 672
Alw21I GWGCWC 2 cut(s) 387, 674
Alw26I GTCTC 2 cut(s) 206, 352
AlwI GGATC 2 cut(s) 159, 695
AlwNI CAGNNNCTG 1 cut(s) 580
ApeKI GCWGC 3 cut(s) 208, 341, 471
Asp700I GAANNNNTTC 1 cut(s) 633
AsuHPI GGTGA 1 cut(s) 745
BanI GGYRCC 1 cut(s) 120
BanII GRGCYC 2 cut(s) 387, 674
Bbv12I GWGCWC 2 cut(s) 387, 674
BbvI GCAGC 3 cut(s) 220, 328, 483
BccI CCATC 2 cut(s) 437, 461
BceAI ACGGC 2 cut(s) 134, 329
BcgI CGANNNNNNTGC 2 cut(s) 386, 420
BciT130I CCWGG 1 cut(s) 434
BcoDI GTCTC 2 cut(s) 206, 352
BisI GCNGC 3 cut(s) 209, 342, 472
BlpI GCTNAGC 1 cut(s) 297
BlsI GCNGC 3 cut(s) 210, 343, 473
Bme1390I CCNGG 1 cut(s) 434
BmiI GGNNCC 1 cut(s) 122
BmrFI CCNGG 1 cut(s) 434
BmrI ACTGGG 1 cut(s) 347
BmsI GCATC 3 cut(s) 277, 310, 609
BmuI ACTGGG 1 cut(s) 347
BpmI CTGGAG 1 cut(s) 602
Bpu1102I GCTNAGC 1 cut(s) 297
BpuEI CTTGAG 1 cut(s) 188
Bsa29I ATCGAT 1 cut(s) 465
BsaBI GATNNNNATC 1 cut(s) 86
BsaJI CCNNGG 1 cut(s) 433
BsaWI WCCGGW 2 cut(s) 113, 184
Bsc4I CCNNNNNNNGG 4 cut(s) 31, 117, 439, 531
Bse1I ACTGG 1 cut(s) 353
Bse3DI GCAATG 1 cut(s) 156
Bse8I GATNNNNATC 1 cut(s) 86
BseBI CCWGG 1 cut(s) 434
BseCI ATCGAT 1 cut(s) 465
BseDI CCNNGG 1 cut(s) 433
BseGI GGATG 2 cut(s) 301, 429
BseJI GATNNNNATC 1 cut(s) 86
BseLI CCNNNNNNNGG 4 cut(s) 31, 117, 439, 531
BseMI GCAATG 1 cut(s) 156
BseMII CTCAG 2 cut(s) 288, 372
BseNI ACTGG 1 cut(s) 353
BseRI GAGGAG 1 cut(s) 86
BseXI GCAGC 3 cut(s) 220, 328, 483
BsgI GTGCAG 1 cut(s) 526
BshNI GGYRCC 1 cut(s) 120
BshVI ATCGAT 1 cut(s) 465
BsiHKAI GWGCWC 2 cut(s) 387, 674
BsiSI CCGG 2 cut(s) 114, 185
BslFI GGGAC 1 cut(s) 585
BslI CCNNNNNNNGG 4 cut(s) 31, 117, 439, 531
BsmAI GTCTC 2 cut(s) 206, 352
BsmBI CGTCTC 2 cut(s) 206, 352
BsmFI GGGAC 1 cut(s) 585
BsmI GAATGC 1 cut(s) 409
Bsp1286I GDGCHC 2 cut(s) 387, 674
Bsp1407I TGTACA 1 cut(s) 102
Bsp143I GATC 2 cut(s) 151, 687
Bsp1720I GCTNAGC 1 cut(s) 297
BspACI CCGC 3 cut(s) 32, 289, 756
BspCNI CTCAG 2 cut(s) 289, 373
BspDI ATCGAT 1 cut(s) 465
BspLI GGNNCC 1 cut(s) 122
BspPI GGATC 2 cut(s) 159, 695
BspT107I GGYRCC 1 cut(s) 120
BsrDI GCAATG 1 cut(s) 156
BsrGI TGTACA 1 cut(s) 102
BsrI ACTGG 1 cut(s) 353
BssECI CCNNGG 1 cut(s) 433
BssMI GATC 2 cut(s) 151, 687
Bst2UI CCWGG 1 cut(s) 434
Bst4CI ACNGT 4 cut(s) 125, 242, 391, 454
BstAUI TGTACA 1 cut(s) 102
BstC8I GCNNGC 3 cut(s) 266, 418, 760
BstDEI CTNAG 2 cut(s) 297, 381
BstF5I GGATG 2 cut(s) 301, 429
BstKTI GATC 2 cut(s) 154, 690
BstMAI GTCTC 2 cut(s) 206, 352
BstMBI GATC 2 cut(s) 151, 687
BstMWI GCNNNNNNNGC 2 cut(s) 167, 413
BstNI CCWGG 1 cut(s) 434
BstSCI CCNGG 1 cut(s) 432
BstV1I GCAGC 3 cut(s) 220, 328, 483
Bsu15I ATCGAT 1 cut(s) 465
BsuTUI ATCGAT 1 cut(s) 465
BtsCI GGATG 2 cut(s) 301, 429
BtsIMutI CAGTG 3 cut(s) 247, 387, 581
Cac8I GCNNGC 3 cut(s) 266, 418, 760
CaiI CAGNNNCTG 1 cut(s) 580
ClaI ATCGAT 1 cut(s) 465
CseI GACGC 1 cut(s) 368
Csp6I GTAC 1 cut(s) 103
CviAII CATG 2 cut(s) 10, 66
CviQI GTAC 1 cut(s) 103
DdeI CTNAG 2 cut(s) 297, 381
DpnI GATC 2 cut(s) 153, 689
DpnII GATC 2 cut(s) 151, 687
DraIII CACNNNGTG 1 cut(s) 127
Ecl136II GAGCTC 2 cut(s) 385, 672
Eco24I GRGCYC 2 cut(s) 387, 674
Eco32I GATATC 2 cut(s) 463, 614
Eco53kI GAGCTC 2 cut(s) 385, 672
Eco57I CTGAAG 1 cut(s) 620
EcoICRI GAGCTC 2 cut(s) 385, 672
EcoRII CCWGG 1 cut(s) 432
EcoRV GATATC 2 cut(s) 463, 614
EcoT38I GRGCYC 2 cut(s) 387, 674
Esp3I CGTCTC 2 cut(s) 206, 352
FaeI CATG 2 cut(s) 13, 69
FaqI GGGAC 1 cut(s) 585
FatI CATG 2 cut(s) 9, 65
FauI CCCGC 1 cut(s) 282
FblI GTMKAC 1 cut(s) 357
Fnu4HI GCNGC 3 cut(s) 209, 342, 472
FokI GGATG 2 cut(s) 288, 416
FriOI GRGCYC 2 cut(s) 387, 674
Fsp4HI GCNGC 3 cut(s) 209, 342, 472
GluI GCNGC 3 cut(s) 209, 342, 472
GsuI CTGGAG 1 cut(s) 602
HapII CCGG 2 cut(s) 114, 185
HgaI GACGC 1 cut(s) 368
Hin1II CATG 2 cut(s) 13, 69
HincII GTYRAC 2 cut(s) 358, 589
HindII GTYRAC 2 cut(s) 358, 589
HinfI GANTC 2 cut(s) 97, 409
HpaII CCGG 2 cut(s) 114, 185
HphI GGTGA 1 cut(s) 745
Hpy166II GTNNAC 4 cut(s) 111, 130, 358, 589
Hpy188I TCNGA 6 cut(s) 273, 382, 618, 669, 687, 729
Hpy8I GTNNAC 4 cut(s) 111, 130, 358, 589
Hpy99I CGWCG 1 cut(s) 362
HpyAV CCTTC 1 cut(s) 36
HpyCH4III ACNGT 4 cut(s) 125, 242, 391, 454
HpyCH4V TGCA 4 cut(s) 37, 543, 567, 653
HpyF10VI GCNNNNNNNGC 2 cut(s) 167, 413
HpyF3I CTNAG 2 cut(s) 297, 381
Hsp92II CATG 2 cut(s) 13, 69
Kzo9I GATC 2 cut(s) 151, 687
LmnI GCTCC 2 cut(s) 442, 669
Lsp1109I GCAGC 3 cut(s) 220, 328, 483
LweI GCATC 3 cut(s) 277, 310, 609
MaeIII GTNAC 2 cut(s) 218, 448
MalI GATC 2 cut(s) 153, 689
MboI GATC 2 cut(s) 151, 687
MboII GAAGA 2 cut(s) 305, 641
MfeI CAATTG 2 cut(s) 212, 763
MhlI GDGCHC 2 cut(s) 387, 674
MluCI AATT 3 cut(s) 212, 456, 763
MnlI CCTC 5 cut(s) 64, 67, 331, 496, 577
MroXI GAANNNNTTC 1 cut(s) 633
MseI TTAA 1 cut(s) 641
MslI CAYNNNNRTG 1 cut(s) 284
MspA1I CMGCKG 2 cut(s) 486, 758
MspI CCGG 2 cut(s) 114, 185
MspR9I CCNGG 1 cut(s) 434
MunI CAATTG 2 cut(s) 212, 763
Mva1269I GAATGC 1 cut(s) 409
MvaI CCWGG 1 cut(s) 434
MwoI GCNNNNNNNGC 2 cut(s) 167, 413
NdeII GATC 2 cut(s) 151, 687
NlaIII CATG 2 cut(s) 13, 69
NlaIV GGNNCC 1 cut(s) 122
NmuCI GTSAC 2 cut(s) 218, 448
PctI GAATGC 1 cut(s) 409
PdmI GAANNNNTTC 1 cut(s) 633
PfeI GAWTC 2 cut(s) 97, 409
PflMI CCANNNNNTGG 1 cut(s) 439
PkrI GCNGC 3 cut(s) 210, 343, 473
Psp124BI GAGCTC 2 cut(s) 387, 674
Psp6I CCWGG 1 cut(s) 432
PspGI CCWGG 1 cut(s) 432
PspN4I GGNNCC 1 cut(s) 122
PstNI CAGNNNCTG 1 cut(s) 580
PvuII CAGCTG 1 cut(s) 486
RsaI GTAC 1 cut(s) 104
RsaNI GTAC 1 cut(s) 103
RseI CAYNNNNRTG 1 cut(s) 284
SacI GAGCTC 2 cut(s) 387, 674
SalI GTCGAC 1 cut(s) 356
SaqAI TTAA 1 cut(s) 641
SatI GCNGC 3 cut(s) 209, 342, 472
Sau3AI GATC 2 cut(s) 151, 687
ScrFI CCNGG 1 cut(s) 434
SduI GDGCHC 2 cut(s) 387, 674
SetI ASST 8 cut(s) 137, 258, 298, 387, 488, 588, 597, 674
SfaNI GCATC 3 cut(s) 277, 310, 609
SmiMI CAYNNNNRTG 1 cut(s) 284
SmlI CTYRAG 1 cut(s) 203
SmoI CTYRAG 1 cut(s) 203
Sse9I AATT 3 cut(s) 212, 456, 763
SsiI CCGC 3 cut(s) 32, 289, 756
SstI GAGCTC 2 cut(s) 387, 674
StyD4I CCNGG 1 cut(s) 432
TaaI ACNGT 4 cut(s) 125, 242, 391, 454
TaqI TCGA 2 cut(s) 357, 465
TasI AATT 3 cut(s) 212, 456, 763
TatI WGTACW 1 cut(s) 102
TfiI GAWTC 2 cut(s) 97, 409
Tru1I TTAA 1 cut(s) 641
Tru9I TTAA 1 cut(s) 641
TscAI CASTG 3 cut(s) 247, 394, 581
TseFI GTSAC 2 cut(s) 218, 448
TseI GCWGC 3 cut(s) 208, 341, 471
Tsp45I GTSAC 2 cut(s) 218, 448
TspDTI ATGAA 3 cut(s) 76, 264, 545
TspGWI ACGGA 1 cut(s) 415
TspRI CASTG 3 cut(s) 247, 394, 581
Van91I CCANNNNNTGG 1 cut(s) 439
XcmI CCANNNNNNNNNTGG 1 cut(s) 436
XmiI GTMKAC 1 cut(s) 357
XmnI GAANNNNTTC 1 cut(s) 633
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.