Rh2DG675600

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000056
Physical Location & Seq
Reverse (-)
89677077 .. 89680683
3607 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG675600.1

Sequence Viewer

Length: 903 bp
ATGTTGGGATATCACTATGTGTATTTTCATGATGCGGTGAAAAAACTGGAAGGCAACCTCAGAGGGTCTTTGGAGGAGGACAAGCTACCTATCAGATTGCAGTTCTTCAAGACAAGCACATCGCACCGTGGGATAGATGATGTTCGCTTACCACCTATTATCGAAACCACAACAATTATCCAACAACTACACAGAAATAGGGAGTATGAAGCGCTCATCTCCGAGTCTCTTTCGAGAATGGGTGTTCCCCAAGATGAGCATCTTACTGCTGTTCACATGCTATTCCAGGCGGTTGAGGCAGCCGGCGACCCCGAGCTCCCTGTTGTACTAGCTGTGTGGGACAGCACTTACCTTGGTAGAGGTGGAGGTGGATGTAGGCCCCATTCGATTCCTGCGAGCAGATCATCAATCCAGGGTTTGGAGCAAGTGACACTCGATAGTGATATTATCACATACTCGCCCTCCTGTGCTATTTGTTTGGAGGATTTTGAACAAGAACCGATCACTGGTGCCTGGAGATCAGCCACATGTGTCCCCTCTGCCGATACCCAATGCCAACAGAAGATTAAGCCCTGCTCAACCTGCCAAGATCAAGAGGTGCTTGCTGTTGTGTTATCAATTACTAGTCTTATTGCATTGCCTCTTTGCAAGGTCCAAGCAAAGAAGGAAACAATATTCAGTGTCAGTATTCTAACTCTACAACAGCCATATACATACCATTCTGAACATATGTCATTTCAACTCTTAATCATTGAAATCATGATGGCTGTTGCAAAAAGTGCTGCCGGCACACTAACGAGAAAGTTGGCAGAACTGGCCTTTAGGGTTCCCACTGTTGATTTTTCCACGGATGACCTCAGACCGAGACTTGAGAGGAAGGCTACTTATGATGAGACAAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

300

Amino Acids

33.45

Weight (kDa)

5.62

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 590
AccB1I GGYRCC 1 cut(s) 509
AccB7I CCANNNNNTGG 1 cut(s) 418
AciI CCGC 2 cut(s) 35, 290
AdeI CACNNNGTG 1 cut(s) 19
AfaI GTAC 1 cut(s) 327
AfeI AGCGCT 1 cut(s) 213
AfiI CCNNNNNNNGG 2 cut(s) 418, 506
AflIII ACRYGT 1 cut(s) 527
AgsI TTSAA 4 cut(s) 109, 491, 740, 755
AhlI ACTAGT 1 cut(s) 623
AjnI CCWGG 3 cut(s) 285, 411, 512
AluBI AGCT 3 cut(s) 85, 316, 332
AluI AGCT 3 cut(s) 85, 316, 332
Alw21I GWGCWC 1 cut(s) 318
Alw26I GTCTC 3 cut(s) 231, 859, 887
Ama87I CYCGRG 1 cut(s) 311
Aor51HI AGCGCT 1 cut(s) 213
AoxI GGCC 2 cut(s) 377, 816
ApeKI GCWGC 2 cut(s) 299, 782
AspLEI GCGC 1 cut(s) 214
AspS9I GGNCC 2 cut(s) 378, 652
AsuHPI GGTGA 1 cut(s) 49
AvaI CYCGRG 1 cut(s) 311
AvaII GGWCC 1 cut(s) 652
BanI GGYRCC 1 cut(s) 509
BanII GRGCYC 1 cut(s) 318
Bbv12I GWGCWC 1 cut(s) 318
BbvI GCAGC 2 cut(s) 311, 769
BccI CCATC 1 cut(s) 757
BciT130I CCWGG 3 cut(s) 287, 413, 514
BcoDI GTCTC 3 cut(s) 231, 859, 887
BcuI ACTAGT 1 cut(s) 623
BfaI CTAG 2 cut(s) 329, 624
BfoI RGCGCY 1 cut(s) 215
BfuAI ACCTGC 1 cut(s) 590
BisI GCNGC 2 cut(s) 300, 783
BlsI GCNGC 2 cut(s) 301, 784
Bme1390I CCNGG 3 cut(s) 287, 413, 514
Bme18I GGWCC 1 cut(s) 652
BmeT110I CYCGRG 1 cut(s) 311
BmgT120I GGNCC 2 cut(s) 378, 652
BmiI GGNNCC 3 cut(s) 380, 511, 828
BmrFI CCNGG 3 cut(s) 287, 413, 514
BmsI GCATC 2 cut(s) 22, 268
BpmI CTGGAG 1 cut(s) 535
BpuEI CTTGAG 1 cut(s) 890
BsaBI GATNNNNATC 1 cut(s) 258
BsaJI CCNNGG 4 cut(s) 127, 352, 412, 846
BsaXI ACNNNNNCTCC 2 cut(s) 446, 476
Bsc4I CCNNNNNNNGG 2 cut(s) 418, 506
Bse118I RCCGGY 2 cut(s) 302, 785
Bse1I ACTGG 3 cut(s) 51, 511, 819
Bse3DI GCAATG 1 cut(s) 635
Bse8I GATNNNNATC 1 cut(s) 258
BseBI CCWGG 3 cut(s) 287, 413, 514
BseDI CCNNGG 4 cut(s) 127, 352, 412, 846
BseGI GGATG 2 cut(s) 377, 856
BseJI GATNNNNATC 1 cut(s) 258
BseLI CCNNNNNNNGG 2 cut(s) 418, 506
BseMI GCAATG 1 cut(s) 635
BseMII CTCAG 2 cut(s) 73, 871
BseNI ACTGG 3 cut(s) 51, 511, 819
BseRI GAGGAG 1 cut(s) 89
BseXI GCAGC 2 cut(s) 311, 769
BshFI GGCC 2 cut(s) 379, 818
BshNI GGYRCC 1 cut(s) 509
BsiHKAI GWGCWC 1 cut(s) 318
BsiHKCI CYCGRG 1 cut(s) 311
BsiSI CCGG 2 cut(s) 303, 786
BslFI GGGAC 2 cut(s) 353, 518
BslI CCNNNNNNNGG 2 cut(s) 418, 506
BsmAI GTCTC 3 cut(s) 231, 859, 887
BsmFI GGGAC 2 cut(s) 353, 518
BsnI GGCC 2 cut(s) 379, 818
BsoBI CYCGRG 1 cut(s) 311
Bsp1286I GDGCHC 1 cut(s) 318
Bsp143I GATC 4 cut(s) 401, 501, 518, 589
BspACI CCGC 2 cut(s) 35, 290
BspANI GGCC 2 cut(s) 379, 818
BspCNI CTCAG 2 cut(s) 72, 870
BspHI TCATGA 2 cut(s) 28, 759
BspLI GGNNCC 3 cut(s) 380, 511, 828
BspMI ACCTGC 1 cut(s) 590
BspT107I GGYRCC 1 cut(s) 509
BsrDI GCAATG 1 cut(s) 635
BsrFI RCCGGY 2 cut(s) 302, 785
BsrI ACTGG 3 cut(s) 51, 511, 819
BssAI RCCGGY 2 cut(s) 302, 785
BssECI CCNNGG 4 cut(s) 127, 352, 412, 846
BssMI GATC 4 cut(s) 401, 501, 518, 589
BssT1I CCWWGG 1 cut(s) 352
Bst2UI CCWGG 3 cut(s) 287, 413, 514
Bst4CI ACNGT 2 cut(s) 128, 835
BstAPI GCANNNNNTGC 1 cut(s) 779
BstC8I GCNNGC 4 cut(s) 304, 397, 603, 787
BstDEI CTNAG 2 cut(s) 59, 857
BstDSI CCRYGG 2 cut(s) 127, 846
BstF5I GGATG 2 cut(s) 377, 856
BstH2I RGCGCY 1 cut(s) 215
BstHHI GCGC 1 cut(s) 214
BstKTI GATC 4 cut(s) 404, 504, 521, 592
BstMAI GTCTC 3 cut(s) 231, 859, 887
BstMBI GATC 4 cut(s) 401, 501, 518, 589
BstMWI GCNNNNNNNGC 4 cut(s) 296, 582, 779, 815
BstNI CCWGG 3 cut(s) 287, 413, 514
BstNSI RCATGY 2 cut(s) 280, 531
BstSCI CCNGG 3 cut(s) 285, 411, 512
BstV1I GCAGC 2 cut(s) 311, 769
BsuRI GGCC 2 cut(s) 379, 818
BtgI CCRYGG 2 cut(s) 127, 846
BtgZI GCGATG 1 cut(s) 105
BtsCI GGATG 2 cut(s) 377, 856
BtsIMutI CAGTG 3 cut(s) 504, 685, 831
BveI ACCTGC 1 cut(s) 590
Cac8I GCNNGC 4 cut(s) 304, 397, 603, 787
CciI TCATGA 2 cut(s) 28, 759
CfoI GCGC 1 cut(s) 214
Cfr10I RCCGGY 2 cut(s) 302, 785
Cfr13I GGNCC 2 cut(s) 378, 652
Csp6I GTAC 1 cut(s) 326
CviAII CATG 4 cut(s) 29, 277, 528, 760
CviQI GTAC 1 cut(s) 326
DdeI CTNAG 2 cut(s) 59, 857
DpnI GATC 4 cut(s) 403, 503, 520, 591
DpnII GATC 4 cut(s) 401, 501, 518, 589
DraIII CACNNNGTG 1 cut(s) 19
Ecl136II GAGCTC 1 cut(s) 316
Eco130I CCWWGG 1 cut(s) 352
Eco24I GRGCYC 1 cut(s) 318
Eco32I GATATC 1 cut(s) 11
Eco47I GGWCC 1 cut(s) 652
Eco47III AGCGCT 1 cut(s) 213
Eco53kI GAGCTC 1 cut(s) 316
Eco88I CYCGRG 1 cut(s) 311
EcoICRI GAGCTC 1 cut(s) 316
EcoO109I RGGNCCY 1 cut(s) 378
EcoRII CCWGG 3 cut(s) 285, 411, 512
EcoRV GATATC 1 cut(s) 11
EcoT14I CCWWGG 1 cut(s) 352
EcoT38I GRGCYC 1 cut(s) 318
ErhI CCWWGG 1 cut(s) 352
FaeI CATG 4 cut(s) 32, 280, 531, 763
FalI AAGNNNNNCTT 2 cut(s) 585, 617
FaqI GGGAC 2 cut(s) 353, 518
FatI CATG 4 cut(s) 28, 276, 527, 759
FauNDI CATATG 1 cut(s) 729
Fnu4HI GCNGC 2 cut(s) 300, 783
FokI GGATG 2 cut(s) 384, 863
FriOI GRGCYC 1 cut(s) 318
Fsp4HI GCNGC 2 cut(s) 300, 783
FspBI CTAG 2 cut(s) 329, 624
GlaI GCGC 1 cut(s) 213
GluI GCNGC 2 cut(s) 300, 783
GsuI CTGGAG 1 cut(s) 535
HaeII RGCGCY 1 cut(s) 215
HaeIII GGCC 2 cut(s) 379, 818
HapII CCGG 2 cut(s) 303, 786
HhaI GCGC 1 cut(s) 214
Hin1II CATG 4 cut(s) 32, 280, 531, 763
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HinfI GANTC 2 cut(s) 224, 388
HpaII CCGG 2 cut(s) 303, 786
HphI GGTGA 1 cut(s) 49
Hpy166II GTNNAC 1 cut(s) 274
Hpy188I TCNGA 5 cut(s) 62, 95, 223, 724, 860
Hpy188III TCNNGA 5 cut(s) 29, 109, 234, 593, 760
Hpy8I GTNNAC 1 cut(s) 274
HpyAV CCTTC 3 cut(s) 44, 658, 871
HpyCH4III ACNGT 2 cut(s) 128, 835
HpyCH4V TGCA 4 cut(s) 100, 635, 648, 773
HpyF10VI GCNNNNNNNGC 4 cut(s) 296, 582, 779, 815
HpyF3I CTNAG 2 cut(s) 59, 857
Hsp92II CATG 4 cut(s) 32, 280, 531, 763
HspAI GCGC 1 cut(s) 212
KroI GCCGGC 2 cut(s) 302, 785
KroNI GCCGGC 2 cut(s) 304, 787
Kzo9I GATC 4 cut(s) 401, 501, 518, 589
LmnI GCTCC 2 cut(s) 321, 421
Lsp1109I GCAGC 2 cut(s) 311, 769
LweI GCATC 2 cut(s) 22, 268
MaeI CTAG 2 cut(s) 329, 624
MaeIII GTNAC 1 cut(s) 427
MalI GATC 4 cut(s) 403, 503, 520, 591
MboI GATC 4 cut(s) 401, 501, 518, 589
MboII GAAGA 2 cut(s) 97, 574
MhlI GDGCHC 1 cut(s) 318
MluCI AATT 2 cut(s) 174, 618
MlyI GAGTC 1 cut(s) 233
MmeI TCCRAC 1 cut(s) 205
MroNI GCCGGC 2 cut(s) 302, 785
MseI TTAA 2 cut(s) 567, 746
MspI CCGG 2 cut(s) 303, 786
MspR9I CCNGG 3 cut(s) 287, 413, 514
MvaI CCWGG 3 cut(s) 287, 413, 514
MwoI GCNNNNNNNGC 4 cut(s) 296, 582, 779, 815
NaeI GCCGGC 2 cut(s) 304, 787
NdeI CATATG 1 cut(s) 729
NdeII GATC 4 cut(s) 401, 501, 518, 589
NgoMIV GCCGGC 2 cut(s) 302, 785
NlaIII CATG 4 cut(s) 32, 280, 531, 763
NlaIV GGNNCC 3 cut(s) 380, 511, 828
NmuCI GTSAC 1 cut(s) 427
NspI RCATGY 2 cut(s) 280, 531
PagI TCATGA 2 cut(s) 28, 759
PciI ACATGT 1 cut(s) 527
PcsI WCGNNNNNNNCGW 1 cut(s) 392
PdiI GCCGGC 2 cut(s) 304, 787
PfeI GAWTC 1 cut(s) 388
PflMI CCANNNNNTGG 1 cut(s) 418
PkrI GCNGC 2 cut(s) 301, 784
PleI GAGTC 1 cut(s) 232
PpsI GAGTC 1 cut(s) 232
PscI ACATGT 1 cut(s) 527
Psp124BI GAGCTC 1 cut(s) 318
Psp6I CCWGG 3 cut(s) 285, 411, 512
PspGI CCWGG 3 cut(s) 285, 411, 512
PspN4I GGNNCC 3 cut(s) 380, 511, 828
PspPI GGNCC 2 cut(s) 378, 652
RsaI GTAC 1 cut(s) 327
RsaNI GTAC 1 cut(s) 326
SacI GAGCTC 1 cut(s) 318
SaqAI TTAA 2 cut(s) 567, 746
SatI GCNGC 2 cut(s) 300, 783
Sau3AI GATC 4 cut(s) 401, 501, 518, 589
Sau96I GGNCC 2 cut(s) 378, 652
SchI GAGTC 1 cut(s) 233
ScrFI CCNGG 3 cut(s) 287, 413, 514
SduI GDGCHC 1 cut(s) 318
SfaNI GCATC 2 cut(s) 22, 268
SinI GGWCC 1 cut(s) 652
SmlI CTYRAG 1 cut(s) 869
SmoI CTYRAG 1 cut(s) 869
SpeI ACTAGT 1 cut(s) 623
Sse9I AATT 2 cut(s) 174, 618
SsiI CCGC 2 cut(s) 35, 290
SspI AATATT 1 cut(s) 675
SspMI CTAG 2 cut(s) 329, 624
SstI GAGCTC 1 cut(s) 318
StyD4I CCNGG 3 cut(s) 285, 411, 512
StyI CCWWGG 1 cut(s) 352
TaaI ACNGT 2 cut(s) 128, 835
TaqI TCGA 4 cut(s) 162, 233, 386, 435
TaqII GACCGA 1 cut(s) 877
TasI AATT 2 cut(s) 174, 618
TatI WGTACW 1 cut(s) 325
TfiI GAWTC 1 cut(s) 388
Tru1I TTAA 2 cut(s) 567, 746
Tru9I TTAA 2 cut(s) 567, 746
TscAI CASTG 3 cut(s) 511, 685, 838
TseFI GTSAC 1 cut(s) 427
TseI GCWGC 2 cut(s) 299, 782
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 2 cut(s) 17, 222
TspGWI ACGGA 1 cut(s) 863
TspRI CASTG 3 cut(s) 511, 685, 838
Van91I CCANNNNNTGG 1 cut(s) 418
VpaK11BI GGWCC 1 cut(s) 652
XceI RCATGY 2 cut(s) 280, 531
XspI CTAG 2 cut(s) 329, 624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.