ubiquitin-protein transferase activity
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 884 |
| AciI | CCGC | 2 cut(s) | 71, 839 |
| AcoI | YGGCCR | 2 cut(s) | 364, 556 |
| AcsI | RAATTY | 6 cut(s) | 258, 847, 1002, 1019, 1049, 1080 |
| AcuI | CTGAAG | 1 cut(s) | 27 |
| AfaI | GTAC | 3 cut(s) | 221, 330, 1261 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 616, 673, 980 |
| AgsI | TTSAA | 6 cut(s) | 88, 512, 635, 1001, 1049, 1099 |
| AjnI | CCWGG | 1 cut(s) | 135 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 722, 754 |
| AluBI | AGCT | 6 cut(s) | 124, 205, 401, 505, 670, 1216 |
| AluI | AGCT | 6 cut(s) | 124, 205, 401, 505, 670, 1216 |
| Alw26I | GTCTC | 3 cut(s) | 900, 1078, 1290 |
| Ama87I | CYCGRG | 1 cut(s) | 1124 |
| AoxI | GGCC | 3 cut(s) | 364, 487, 556 |
| ApeKI | GCWGC | 6 cut(s) | 117, 443, 502, 624, 627, 1255 |
| ApoI | RAATTY | 6 cut(s) | 258, 847, 1002, 1019, 1049, 1080 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 514, 546 |
| AspLEI | GCGC | 1 cut(s) | 624 |
| AspS9I | GGNCC | 2 cut(s) | 488, 659 |
| AsuC2I | CCSGG | 1 cut(s) | 675 |
| AsuHPI | GGTGA | 2 cut(s) | 85, 821 |
| AvaI | CYCGRG | 1 cut(s) | 1124 |
| AvaII | GGWCC | 1 cut(s) | 659 |
| BaeGI | GKGCMC | 1 cut(s) | 1211 |
| BalI | TGGCCA | 1 cut(s) | 366 |
| BanI | GGYRCC | 1 cut(s) | 884 |
| BbsI | GAAGAC | 2 cut(s) | 195, 527 |
| BbvI | GCAGC | 6 cut(s) | 129, 430, 514, 636, 639, 1242 |
| BccI | CCATC | 2 cut(s) | 220, 1000 |
| BceAI | ACGGC | 1 cut(s) | 284 |
| BciT130I | CCWGG | 1 cut(s) | 137 |
| BclI | TGATCA | 1 cut(s) | 496 |
| BcnI | CCSGG | 1 cut(s) | 675 |
| BcoDI | GTCTC | 3 cut(s) | 900, 1078, 1290 |
| BfaI | CTAG | 3 cut(s) | 180, 239, 402 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 882 |
| BglII | AGATCT | 1 cut(s) | 644 |
| BisI | GCNGC | 6 cut(s) | 118, 444, 503, 625, 628, 1256 |
| BlsI | GCNGC | 6 cut(s) | 119, 445, 504, 626, 629, 1257 |
| Bme1390I | CCNGG | 2 cut(s) | 137, 675 |
| Bme18I | GGWCC | 1 cut(s) | 659 |
| BmeT110I | CYCGRG | 1 cut(s) | 1124 |
| BmgT120I | GGNCC | 2 cut(s) | 488, 659 |
| BmiI | GGNNCC | 2 cut(s) | 683, 886 |
| BmrFI | CCNGG | 2 cut(s) | 137, 675 |
| BmsI | GCATC | 4 cut(s) | 142, 703, 850, 1110 |
| BpiI | GAAGAC | 2 cut(s) | 195, 527 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 743, 775 |
| BpmI | CTGGAG | 1 cut(s) | 50 |
| BpuEI | CTTGAG | 1 cut(s) | 167 |
| BpuMI | CCSGG | 1 cut(s) | 675 |
| BsaJI | CCNNGG | 1 cut(s) | 674 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 616, 673, 980 |
| Bse1I | ACTGG | 2 cut(s) | 84, 197 |
| Bse3DI | GCAATG | 2 cut(s) | 830, 864 |
| BseBI | CCWGG | 1 cut(s) | 137 |
| BseDI | CCNNGG | 1 cut(s) | 674 |
| BseGI | GGATG | 3 cut(s) | 157, 1125, 1341 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 616, 673, 980 |
| BseMI | GCAATG | 2 cut(s) | 830, 864 |
| BseMII | CTCAG | 3 cut(s) | 84, 277, 1089 |
| BseNI | ACTGG | 2 cut(s) | 84, 197 |
| BseRI | GAGGAG | 2 cut(s) | 293, 966 |
| BseSI | GKGCMC | 1 cut(s) | 1211 |
| BseXI | GCAGC | 6 cut(s) | 129, 430, 514, 636, 639, 1242 |
| BshFI | GGCC | 3 cut(s) | 366, 489, 558 |
| BshNI | GGYRCC | 1 cut(s) | 884 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1124 |
| BsiSI | CCGG | 1 cut(s) | 674 |
| BsiWI | CGTACG | 1 cut(s) | 219 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 616, 673, 980 |
| BsmAI | GTCTC | 3 cut(s) | 900, 1078, 1290 |
| BsmI | GAATGC | 1 cut(s) | 94 |
| BsnI | GGCC | 3 cut(s) | 366, 489, 558 |
| BsoBI | CYCGRG | 1 cut(s) | 1124 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1211 |
| Bsp143I | GATC | 4 cut(s) | 496, 644, 906, 1269 |
| BspACI | CCGC | 2 cut(s) | 71, 839 |
| BspANI | GGCC | 3 cut(s) | 366, 489, 558 |
| BspCNI | CTCAG | 3 cut(s) | 85, 276, 1088 |
| BspLI | GGNNCC | 2 cut(s) | 683, 886 |
| BspQI | GCTCTTC | 1 cut(s) | 789 |
| BspT107I | GGYRCC | 1 cut(s) | 884 |
| BsrDI | GCAATG | 2 cut(s) | 830, 864 |
| BsrI | ACTGG | 2 cut(s) | 84, 197 |
| BssECI | CCNNGG | 1 cut(s) | 674 |
| BssMI | GATC | 4 cut(s) | 496, 644, 906, 1269 |
| Bst2UI | CCWGG | 1 cut(s) | 137 |
| Bst4CI | ACNGT | 1 cut(s) | 738 |
| Bst6I | CTCTTC | 2 cut(s) | 789, 1128 |
| BstC8I | GCNNGC | 2 cut(s) | 122, 668 |
| BstDEI | CTNAG | 3 cut(s) | 93, 263, 1075 |
| BstF5I | GGATG | 3 cut(s) | 157, 1125, 1341 |
| BstHHI | GCGC | 1 cut(s) | 624 |
| BstKTI | GATC | 4 cut(s) | 499, 647, 909, 1272 |
| BstMAI | GTCTC | 3 cut(s) | 900, 1078, 1290 |
| BstMBI | GATC | 4 cut(s) | 496, 644, 906, 1269 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 31, 137, 882 |
| BstNI | CCWGG | 1 cut(s) | 137 |
| BstNSI | RCATGY | 1 cut(s) | 238 |
| BstSCI | CCNGG | 2 cut(s) | 135, 673 |
| BstSLI | GKGCMC | 1 cut(s) | 1211 |
| BstV1I | GCAGC | 6 cut(s) | 129, 430, 514, 636, 639, 1242 |
| BstV2I | GAAGAC | 2 cut(s) | 195, 527 |
| BstX2I | RGATCY | 1 cut(s) | 644 |
| BstYI | RGATCY | 1 cut(s) | 644 |
| BsuRI | GGCC | 3 cut(s) | 366, 489, 558 |
| BtgZI | GCGATG | 1 cut(s) | 978 |
| BtsCI | GGATG | 3 cut(s) | 157, 1125, 1341 |
| BtsI | GCAGTG | 1 cut(s) | 1223 |
| BtsIMutI | CAGTG | 3 cut(s) | 252, 1120, 1223 |
| Cac8I | GCNNGC | 2 cut(s) | 122, 668 |
| CfoI | GCGC | 1 cut(s) | 624 |
| Cfr13I | GGNCC | 2 cut(s) | 488, 659 |
| CseI | GACGC | 1 cut(s) | 185 |
| Csp6I | GTAC | 3 cut(s) | 220, 329, 1260 |
| CviAII | CATG | 4 cut(s) | 235, 340, 656, 663 |
| CviQI | GTAC | 3 cut(s) | 220, 329, 1260 |
| DdeI | CTNAG | 3 cut(s) | 93, 263, 1075 |
| DpnI | GATC | 4 cut(s) | 498, 646, 908, 1271 |
| DpnII | GATC | 4 cut(s) | 496, 644, 906, 1269 |
| EaeI | YGGCCR | 2 cut(s) | 364, 556 |
| Eam1104I | CTCTTC | 2 cut(s) | 789, 1128 |
| EarI | CTCTTC | 2 cut(s) | 789, 1128 |
| Eco47I | GGWCC | 1 cut(s) | 659 |
| Eco57I | CTGAAG | 1 cut(s) | 27 |
| Eco88I | CYCGRG | 1 cut(s) | 1124 |
| EcoRI | GAATTC | 2 cut(s) | 1019, 1080 |
| EcoRII | CCWGG | 1 cut(s) | 135 |
| FaeI | CATG | 4 cut(s) | 238, 343, 659, 666 |
| FatI | CATG | 4 cut(s) | 234, 339, 655, 662 |
| FbaI | TGATCA | 1 cut(s) | 496 |
| Fnu4HI | GCNGC | 6 cut(s) | 118, 444, 503, 625, 628, 1256 |
| FokI | GGATG | 3 cut(s) | 164, 1132, 1328 |
| Fsp4HI | GCNGC | 6 cut(s) | 118, 444, 503, 625, 628, 1256 |
| FspBI | CTAG | 3 cut(s) | 180, 239, 402 |
| GlaI | GCGC | 1 cut(s) | 623 |
| GluI | GCNGC | 6 cut(s) | 118, 444, 503, 625, 628, 1256 |
| GsuI | CTGGAG | 1 cut(s) | 50 |
| HaeIII | GGCC | 3 cut(s) | 366, 489, 558 |
| HapII | CCGG | 1 cut(s) | 674 |
| HgaI | GACGC | 1 cut(s) | 185 |
| HhaI | GCGC | 1 cut(s) | 624 |
| Hin1II | CATG | 4 cut(s) | 238, 343, 659, 666 |
| Hin6I | GCGC | 1 cut(s) | 622 |
| HinP1I | GCGC | 1 cut(s) | 622 |
| HincII | GTYRAC | 1 cut(s) | 432 |
| HindII | GTYRAC | 1 cut(s) | 432 |
| HinfI | GANTC | 8 cut(s) | 652, 812, 854, 893, 1285, 1367, 1373, 1379 |
| HpaI | GTTAAC | 1 cut(s) | 432 |
| HpaII | CCGG | 1 cut(s) | 674 |
| HphI | GGTGA | 2 cut(s) | 85, 821 |
| Hpy166II | GTNNAC | 2 cut(s) | 432, 477 |
| Hpy188I | TCNGA | 7 cut(s) | 266, 651, 817, 1284, 1372, 1378, 1384 |
| Hpy188III | TCNNGA | 6 cut(s) | 29, 1007, 1024, 1077, 1237, 1289 |
| Hpy8I | GTNNAC | 2 cut(s) | 432, 477 |
| HpyAV | CCTTC | 7 cut(s) | 286, 290, 319, 399, 608, 1136, 1312 |
| HpyCH4III | ACNGT | 1 cut(s) | 738 |
| HpyCH4IV | ACGT | 3 cut(s) | 102, 218, 331 |
| HpyCH4V | TGCA | 4 cut(s) | 11, 155, 835, 1195 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 31, 137, 882 |
| HpyF3I | CTNAG | 3 cut(s) | 93, 263, 1075 |
| HpySE526I | ACGT | 3 cut(s) | 102, 218, 331 |
| Hsp92II | CATG | 4 cut(s) | 238, 343, 659, 666 |
| HspAI | GCGC | 1 cut(s) | 622 |
| Ksp22I | TGATCA | 1 cut(s) | 496 |
| KspAI | GTTAAC | 1 cut(s) | 432 |
| Kzo9I | GATC | 4 cut(s) | 496, 644, 906, 1269 |
| LguI | GCTCTTC | 1 cut(s) | 789 |
| LmnI | GCTCC | 2 cut(s) | 31, 681 |
| Lsp1109I | GCAGC | 6 cut(s) | 129, 430, 514, 636, 639, 1242 |
| LweI | GCATC | 4 cut(s) | 142, 703, 850, 1110 |
| MaeI | CTAG | 3 cut(s) | 180, 239, 402 |
| MaeII | ACGT | 3 cut(s) | 102, 218, 331 |
| MaeIII | GTNAC | 3 cut(s) | 169, 214, 313 |
| MalI | GATC | 4 cut(s) | 498, 646, 908, 1271 |
| MboI | GATC | 4 cut(s) | 496, 644, 906, 1269 |
| MfeI | CAATTG | 1 cut(s) | 35 |
| MflI | RGATCY | 1 cut(s) | 644 |
| MhlI | GDGCHC | 1 cut(s) | 1211 |
| MlsI | TGGCCA | 1 cut(s) | 366 |
| MluNI | TGGCCA | 1 cut(s) | 366 |
| MlyI | GAGTC | 1 cut(s) | 902 |
| MmeI | TCCRAC | 1 cut(s) | 177 |
| Mox20I | TGGCCA | 1 cut(s) | 366 |
| MscI | TGGCCA | 1 cut(s) | 366 |
| MseI | TTAA | 2 cut(s) | 105, 431 |
| MslI | CAYNNNNRTG | 1 cut(s) | 20 |
| Msp20I | TGGCCA | 1 cut(s) | 366 |
| MspI | CCGG | 1 cut(s) | 674 |
| MspR9I | CCNGG | 2 cut(s) | 137, 675 |
| MunI | CAATTG | 1 cut(s) | 35 |
| Mva1269I | GAATGC | 1 cut(s) | 94 |
| MvaI | CCWGG | 1 cut(s) | 137 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 31, 137, 882 |
| NciI | CCSGG | 1 cut(s) | 675 |
| NdeII | GATC | 4 cut(s) | 496, 644, 906, 1269 |
| NlaIII | CATG | 4 cut(s) | 238, 343, 659, 666 |
| NlaIV | GGNNCC | 2 cut(s) | 683, 886 |
| NmeAIII | GCCGAG | 2 cut(s) | 584, 635 |
| NmuCI | GTSAC | 2 cut(s) | 169, 214 |
| NspI | RCATGY | 1 cut(s) | 238 |
| PciSI | GCTCTTC | 1 cut(s) | 789 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 228 |
| PctI | GAATGC | 1 cut(s) | 94 |
| PfeI | GAWTC | 7 cut(s) | 652, 812, 854, 1285, 1367, 1373, 1379 |
| Pfl23II | CGTACG | 1 cut(s) | 219 |
| PkrI | GCNGC | 6 cut(s) | 119, 445, 504, 626, 629, 1257 |
| PleI | GAGTC | 1 cut(s) | 901 |
| PpsI | GAGTC | 1 cut(s) | 901 |
| Psp6I | CCWGG | 1 cut(s) | 135 |
| PspGI | CCWGG | 1 cut(s) | 135 |
| PspLI | CGTACG | 1 cut(s) | 219 |
| PspN4I | GGNNCC | 2 cut(s) | 683, 886 |
| PspPI | GGNCC | 2 cut(s) | 488, 659 |
| PsuI | RGATCY | 1 cut(s) | 644 |
| RsaI | GTAC | 3 cut(s) | 221, 330, 1261 |
| RsaNI | GTAC | 3 cut(s) | 220, 329, 1260 |
| RseI | CAYNNNNRTG | 1 cut(s) | 20 |
| SapI | GCTCTTC | 1 cut(s) | 789 |
| SaqAI | TTAA | 2 cut(s) | 105, 431 |
| SatI | GCNGC | 6 cut(s) | 118, 444, 503, 625, 628, 1256 |
| Sau3AI | GATC | 4 cut(s) | 496, 644, 906, 1269 |
| Sau96I | GGNCC | 2 cut(s) | 488, 659 |
| SchI | GAGTC | 1 cut(s) | 902 |
| ScrFI | CCNGG | 2 cut(s) | 137, 675 |
| SduI | GDGCHC | 1 cut(s) | 1211 |
| SfaNI | GCATC | 4 cut(s) | 142, 703, 850, 1110 |
| SinI | GGWCC | 1 cut(s) | 659 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 20 |
| SmlI | CTYRAG | 1 cut(s) | 146 |
| SmoI | CTYRAG | 1 cut(s) | 146 |
| SsiI | CCGC | 2 cut(s) | 71, 839 |
| SspI | AATATT | 1 cut(s) | 959 |
| SspMI | CTAG | 3 cut(s) | 180, 239, 402 |
| StyD4I | CCNGG | 2 cut(s) | 135, 673 |
| TaaI | ACNGT | 1 cut(s) | 738 |
| TaiI | ACGT | 3 cut(s) | 105, 221, 334 |
| TaqI | TCGA | 4 cut(s) | 537, 905, 1290, 1360 |
| TfiI | GAWTC | 7 cut(s) | 652, 812, 854, 1285, 1367, 1373, 1379 |
| Tru1I | TTAA | 2 cut(s) | 105, 431 |
| Tru9I | TTAA | 2 cut(s) | 105, 431 |
| TscAI | CASTG | 3 cut(s) | 259, 1120, 1230 |
| TseFI | GTSAC | 2 cut(s) | 169, 214 |
| TseI | GCWGC | 6 cut(s) | 117, 443, 502, 624, 627, 1255 |
| Tsp45I | GTSAC | 2 cut(s) | 169, 214 |
| TspDTI | ATGAA | 4 cut(s) | 374, 458, 516, 963 |
| TspRI | CASTG | 3 cut(s) | 259, 1120, 1230 |
| VpaK11BI | GGWCC | 1 cut(s) | 659 |
| XapI | RAATTY | 6 cut(s) | 258, 847, 1002, 1019, 1049, 1080 |
| XceI | RCATGY | 1 cut(s) | 238 |
| XspI | CTAG | 3 cut(s) | 180, 239, 402 |