Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0000056

Physical Location & Seq

Genomic Coordinates Reverse (-)

2884656 .. 2885941

Gene Structure 1286 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g04834.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 795 bp

ATGTCTCGGCAGAGACGTTATTTTTGGAGCAATGTGACCGATACACATCCAAGAGATCCAAGATTAGGACTAGAAATTGAAATCCCACCAGACGCGGACACAAAAATTGCATTTTGTTACTACATGATATCTGGACGAAGCTGGACCAATGCTCCAGATGCCACCGTTTTCTATGCCCCAATGCTCATAGATCGTAAACTAGTTTTCGCTACTCTCTCTGCTGCCAAGAAATCATCCAAAAGGGGTCAATATACCACGTTGATGGCTTGGCACCTTTCAAACTTTGGTGTCCCAAGACATAAGCAGCAGGCTCTTCTTGAAAAAATATTTGGTGTGATTGATGTCATCGTCCCTGGGAGTCATATTGTTGTGTTATTAGGGAACGTGACCGTCCAACTCTTAGACAGCAGTCCAATTATGCATCACTTTGATAGTTTGGAGAAAGTGAGACTTGATAGTTTGGAAGCTGCTGTTAGACAGATGCCTTGTGCTGTTTGCATGGATGACCTTGATCGCTTTGATGCTGCAGAAGAAGAAGAAGGGAATGATCATCATCAGCGTATCATTGCTCGCCTGCCCTGCTCACATATCTATCATGAAGGTTGCATTGTCCAGTGGCTCGAGACTAATCACAGGTGTCCCTTATGCGGATACCCGGCTGTGAAGGCATCTAATAAGCCTTCATTGAGGGTGCATTGGCCAATGCTCATGATGTCTGTGGTTGGTATGCTGACTGCTACACTGGTTCCCAGATTGTTTGAACGGAGGCAGCAAGGATGTAAGTATCACCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000122 GO:0003674 GO:0003824 GO:0004842 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006355 GO:0006357 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0007549 GO:0008150 GO:0008152 GO:0009048 GO:0009056 GO:0009057 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010468 GO:0010498 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016567 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031974 GO:0031981 GO:0032446 GO:0036211 GO:0040029 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043433 GO:0043632 GO:0044092 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045934 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0051090 GO:0051171 GO:0051172 GO:0051252 GO:0051253 GO:0051603 GO:0060255 GO:0060816 GO:0061630 GO:0061659 GO:0065007 GO:0065009 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1900095 GO:1901564 GO:1901565 GO:1901575 GO:1902679 GO:1903506 GO:1903507 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PA zf-RING_2

Protein Analysis

265

Amino Acids

30.18

Weight (kDa)

8.4

Isoelectric Point (pI)

51.54

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-RING_2	PF13639	163 - 216	4.2e-09	Ring finger domain
zf-rbx1	PF12678	163 - 216	1.5e-09	RING-H2 zinc finger domain
zf-C3HC4	PF00097	163 - 216	3.3e-06	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2	PF13923	192 - 216	4.7e-06	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G74620
fragaria_vesca	FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica	MD14G1195700.v1.1
prunus_persica	Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis	pycom17g01390
rosa_chinensis	RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata	RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora	Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii	Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa	Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha	Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana	Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	270
AccII	CGCG	1 cut(s)	95
AciI	CCGC	2 cut(s)	95, 648
AclWI	GGATC	1 cut(s)	50
AcoI	YGGCCR	1 cut(s)	698
AfiI	CCNNNNNNNGG	2 cut(s)	65, 647
AgsI	TTSAA	4 cut(s)	80, 279, 320, 761
AhlI	ACTAGT	1 cut(s)	199
AjnI	CCWGG	1 cut(s)	352
AjuI	GAANNNNNNNTTGG	2 cut(s)	312, 344
AluBI	AGCT	2 cut(s)	141, 467
AluI	AGCT	2 cut(s)	141, 467
Alw26I	GTCTC	4 cut(s)	7, 9, 442, 617
AlwI	GGATC	1 cut(s)	50
Ama87I	CYCGRG	1 cut(s)	620
AoxI	GGCC	1 cut(s)	698
ApeKI	GCWGC	5 cut(s)	221, 304, 467, 524, 769
ArsI	GACNNNNNNTTYG	1 cut(s)	38
AspS9I	GGNCC	1 cut(s)	144
AsuC2I	CCSGG	1 cut(s)	656
AsuHPI	GGTGA	1 cut(s)	779
AvaI	CYCGRG	1 cut(s)	620
AvaII	GGWCC	1 cut(s)	144
BalI	TGGCCA	1 cut(s)	700
BanI	GGYRCC	1 cut(s)	270
BbvI	GCAGC	5 cut(s)	208, 316, 454, 511, 781
BccI	CCATC	1 cut(s)	256
BciT130I	CCWGG	1 cut(s)	354
BciVI	GTATCC	1 cut(s)	644
BclI	TGATCA	1 cut(s)	547
BcnI	CCSGG	1 cut(s)	656
BcoDI	GTCTC	4 cut(s)	7, 9, 442, 617
BcuI	ACTAGT	1 cut(s)	199
BfaI	CTAG	2 cut(s)	71, 200
BfmI	CTRYAG	1 cut(s)	525
BfuI	GTATCC	1 cut(s)	644
BisI	GCNGC	5 cut(s)	222, 305, 468, 525, 770
BlsI	GCNGC	5 cut(s)	223, 306, 469, 526, 771
Bme1390I	CCNGG	2 cut(s)	354, 656
Bme18I	GGWCC	1 cut(s)	144
BmeT110I	CYCGRG	1 cut(s)	620
BmgT120I	GGNCC	1 cut(s)	144
BmiI	GGNNCC	2 cut(s)	272, 747
BmrFI	CCNGG	2 cut(s)	354, 656
BmsI	GCATC	5 cut(s)	148, 430, 471, 511, 677
BoxI	GACNNNNGTC	1 cut(s)	408
BpmI	CTGGAG	1 cut(s)	138
BpuMI	CCSGG	1 cut(s)	656
BsaBI	GATNNNNATC	2 cut(s)	45, 552
BsaJI	CCNNGG	2 cut(s)	352, 353
BsaXI	ACNNNNNCTCC	2 cut(s)	136, 166
Bsc4I	CCNNNNNNNGG	2 cut(s)	65, 647
Bse1I	ACTGG	2 cut(s)	613, 747
Bse3DI	GCAATG	2 cut(s)	37, 564
Bse8I	GATNNNNATC	2 cut(s)	45, 552
BseBI	CCWGG	1 cut(s)	354
BseDI	CCNNGG	2 cut(s)	352, 353
BseGI	GGATG	4 cut(s)	46, 233, 508, 782
BseJI	GATNNNNATC	2 cut(s)	45, 552
BseLI	CCNNNNNNNGG	2 cut(s)	65, 647
BseMI	GCAATG	2 cut(s)	37, 564
BseNI	ACTGG	2 cut(s)	613, 747
BseXI	GCAGC	5 cut(s)	208, 316, 454, 511, 781
Bsh1236I	CGCG	1 cut(s)	95
BshFI	GGCC	1 cut(s)	700
BshNI	GGYRCC	1 cut(s)	270
BsiHKCI	CYCGRG	1 cut(s)	620
BsiSI	CCGG	1 cut(s)	656
BslFI	GGGAC	3 cut(s)	275, 335, 624
BslI	CCNNNNNNNGG	2 cut(s)	65, 647
BsmAI	GTCTC	4 cut(s)	7, 9, 442, 617
BsmBI	CGTCTC	1 cut(s)	7
BsmFI	GGGAC	3 cut(s)	275, 335, 624
BsnI	GGCC	1 cut(s)	700
BsoBI	CYCGRG	1 cut(s)	620
Bsp143I	GATC	4 cut(s)	55, 190, 511, 547
BspACI	CCGC	2 cut(s)	95, 648
BspANI	GGCC	1 cut(s)	700
BspFNI	CGCG	1 cut(s)	95
BspHI	TCATGA	2 cut(s)	595, 708
BspLI	GGNNCC	2 cut(s)	272, 747
BspMAI	CTGCAG	1 cut(s)	529
BspPI	GGATC	1 cut(s)	50
BspQI	GCTCTTC	1 cut(s)	318
BspT107I	GGYRCC	1 cut(s)	270
BsrDI	GCAATG	2 cut(s)	37, 564
BsrI	ACTGG	2 cut(s)	613, 747
BssECI	CCNNGG	2 cut(s)	352, 353
BssMI	GATC	4 cut(s)	55, 190, 511, 547
Bst2UI	CCWGG	1 cut(s)	354
Bst4CI	ACNGT	2 cut(s)	166, 391
Bst6I	CTCTTC	1 cut(s)	318
BstC8I	GCNNGC	3 cut(s)	309, 571, 575
BstDEI	CTNAG	1 cut(s)	400
BstF5I	GGATG	4 cut(s)	46, 233, 508, 782
BstFNI	CGCG	1 cut(s)	95
BstKTI	GATC	4 cut(s)	58, 193, 514, 550
BstMAI	GTCTC	4 cut(s)	7, 9, 442, 617
BstMBI	GATC	4 cut(s)	55, 190, 511, 547
BstMWI	GCNNNNNNNGC	3 cut(s)	158, 579, 665
BstNI	CCWGG	1 cut(s)	354
BstPAI	GACNNNNGTC	1 cut(s)	408
BstSCI	CCNGG	2 cut(s)	352, 654
BstSFI	CTRYAG	1 cut(s)	525
BstUI	CGCG	1 cut(s)	95
BstV1I	GCAGC	5 cut(s)	208, 316, 454, 511, 781
BstX2I	RGATCY	1 cut(s)	55
BstXI	CCANNNNNNTGG	1 cut(s)	262
BstYI	RGATCY	1 cut(s)	55
BsuI	GTATCC	1 cut(s)	644
BsuRI	GGCC	1 cut(s)	700
BtsCI	GGATG	4 cut(s)	46, 233, 508, 782
BtsIMutI	CAGTG	2 cut(s)	620, 740
Cac8I	GCNNGC	3 cut(s)	309, 571, 575
CciI	TCATGA	2 cut(s)	595, 708
Cfr13I	GGNCC	1 cut(s)	144
CseI	GACGC	1 cut(s)	101
CviAII	CATG	4 cut(s)	124, 499, 596, 709
CviJI	RGCY	8 cut(s)	141, 266, 311, 467, 619, 659, 679, 700
CviKI_1	RGCY	8 cut(s)	141, 266, 311, 467, 619, 659, 679, 700
DdeI	CTNAG	1 cut(s)	400
DpnI	GATC	4 cut(s)	57, 192, 513, 549
DpnII	GATC	4 cut(s)	55, 190, 511, 547
EaeI	YGGCCR	1 cut(s)	698
Eam1104I	CTCTTC	1 cut(s)	318
EarI	CTCTTC	1 cut(s)	318
Eco32I	GATATC	1 cut(s)	129
Eco47I	GGWCC	1 cut(s)	144
Eco88I	CYCGRG	1 cut(s)	620
EcoRII	CCWGG	1 cut(s)	352
EcoRV	GATATC	1 cut(s)	129
EcoT22I	ATGCAT	1 cut(s)	423
Esp3I	CGTCTC	1 cut(s)	7
FaeI	CATG	4 cut(s)	127, 502, 599, 712
FalI	AAGNNNNNCTT	2 cut(s)	435, 467
FaqI	GGGAC	3 cut(s)	275, 335, 624
FatI	CATG	4 cut(s)	123, 498, 595, 708
FbaI	TGATCA	1 cut(s)	547
Fnu4HI	GCNGC	5 cut(s)	222, 305, 468, 525, 770
FokI	GGATG	4 cut(s)	33, 220, 515, 789
Fsp4HI	GCNGC	5 cut(s)	222, 305, 468, 525, 770
FspBI	CTAG	2 cut(s)	71, 200
GluI	GCNGC	5 cut(s)	222, 305, 468, 525, 770
GsuI	CTGGAG	1 cut(s)	138
HaeIII	GGCC	1 cut(s)	700
HapII	CCGG	1 cut(s)	656
HgaI	GACGC	1 cut(s)	101
Hin1II	CATG	4 cut(s)	127, 502, 599, 712
HinfI	GANTC	1 cut(s)	358
HpaII	CCGG	1 cut(s)	656
HphI	GGTGA	1 cut(s)	779
Hpy166II	GTNNAC	1 cut(s)	197
Hpy188III	TCNNGA	6 cut(s)	132, 155, 317, 596, 622, 709
Hpy8I	GTNNAC	1 cut(s)	197
HpyAV	CCTTC	4 cut(s)	533, 593, 658, 690
HpyCH4III	ACNGT	2 cut(s)	166, 391
HpyCH4IV	ACGT	3 cut(s)	16, 257, 384
HpyCH4V	TGCA	6 cut(s)	110, 421, 498, 527, 606, 694
HpyF10VI	GCNNNNNNNGC	3 cut(s)	158, 579, 665
HpyF3I	CTNAG	1 cut(s)	400
HpySE526I	ACGT	3 cut(s)	16, 257, 384
Hsp92II	CATG	4 cut(s)	127, 502, 599, 712
Ksp22I	TGATCA	1 cut(s)	547
Kzo9I	GATC	4 cut(s)	55, 190, 511, 547
LguI	GCTCTTC	1 cut(s)	318
LmnI	GCTCC	2 cut(s)	27, 157
Lsp1109I	GCAGC	5 cut(s)	208, 316, 454, 511, 781
LweI	GCATC	5 cut(s)	148, 430, 471, 511, 677
MaeI	CTAG	2 cut(s)	71, 200
MaeII	ACGT	3 cut(s)	16, 257, 384
MaeIII	GTNAC	3 cut(s)	34, 116, 385
MalI	GATC	4 cut(s)	57, 192, 513, 549
MboI	GATC	4 cut(s)	55, 190, 511, 547
MboII	GAAGA	4 cut(s)	305, 542, 545, 548
MflI	RGATCY	1 cut(s)	55
MlsI	TGGCCA	1 cut(s)	700
MluCI	AATT	3 cut(s)	75, 105, 414
MluNI	TGGCCA	1 cut(s)	700
MlyI	GAGTC	1 cut(s)	367
MmeI	TCCRAC	1 cut(s)	418
MnlI	CCTC	2 cut(s)	681, 759
Mox20I	TGGCCA	1 cut(s)	700
Mph1103I	ATGCAT	1 cut(s)	423
MscI	TGGCCA	1 cut(s)	700
MslI	CAYNNNNRTG	1 cut(s)	260
Msp20I	TGGCCA	1 cut(s)	700
MspI	CCGG	1 cut(s)	656
MspR9I	CCNGG	2 cut(s)	354, 656
MvaI	CCWGG	1 cut(s)	354
MvnI	CGCG	1 cut(s)	95
MwoI	GCNNNNNNNGC	3 cut(s)	158, 579, 665
NciI	CCSGG	1 cut(s)	656
NdeII	GATC	4 cut(s)	55, 190, 511, 547
NlaIII	CATG	4 cut(s)	127, 502, 599, 712
NlaIV	GGNNCC	2 cut(s)	272, 747
NmuCI	GTSAC	2 cut(s)	34, 385
NsiI	ATGCAT	1 cut(s)	423
PaeR7I	CTCGAG	1 cut(s)	620
PagI	TCATGA	2 cut(s)	595, 708
PasI	CCCWGGG	1 cut(s)	353
PciSI	GCTCTTC	1 cut(s)	318
PcsI	WCGNNNNNNNCGW	1 cut(s)	13
PkrI	GCNGC	5 cut(s)	223, 306, 469, 526, 771
PleI	GAGTC	1 cut(s)	366
PpsI	GAGTC	1 cut(s)	366
PshAI	GACNNNNGTC	1 cut(s)	408
Psp6I	CCWGG	1 cut(s)	352
PspGI	CCWGG	1 cut(s)	352
PspN4I	GGNNCC	2 cut(s)	272, 747
PspPI	GGNCC	1 cut(s)	144
PstI	CTGCAG	1 cut(s)	529
PsuI	RGATCY	1 cut(s)	55
RseI	CAYNNNNRTG	1 cut(s)	260
SapI	GCTCTTC	1 cut(s)	318
SatI	GCNGC	5 cut(s)	222, 305, 468, 525, 770
Sau3AI	GATC	4 cut(s)	55, 190, 511, 547
Sau96I	GGNCC	1 cut(s)	144
SchI	GAGTC	1 cut(s)	367
ScrFI	CCNGG	2 cut(s)	354, 656
SetI	ASST	9 cut(s)	19, 143, 260, 276, 387, 469, 510, 604, 638
SfaNI	GCATC	5 cut(s)	148, 430, 471, 511, 677
SfcI	CTRYAG	1 cut(s)	525
Sfr274I	CTCGAG	1 cut(s)	620
SinI	GGWCC	1 cut(s)	144
SlaI	CTCGAG	1 cut(s)	620
SmiMI	CAYNNNNRTG	1 cut(s)	260
SmlI	CTYRAG	1 cut(s)	620
SmoI	CTYRAG	1 cut(s)	620
SpeI	ACTAGT	1 cut(s)	199
Sse9I	AATT	3 cut(s)	75, 105, 414
SsiI	CCGC	2 cut(s)	95, 648
SspI	AATATT	1 cut(s)	327
SspMI	CTAG	2 cut(s)	71, 200
StyD4I	CCNGG	2 cut(s)	352, 654
TaaI	ACNGT	2 cut(s)	166, 391
TaiI	ACGT	3 cut(s)	19, 260, 387
TaqI	TCGA	1 cut(s)	621
TaqII	GACCGA	1 cut(s)	53
TasI	AATT	3 cut(s)	75, 105, 414
TscAI	CASTG	2 cut(s)	620, 747
TseFI	GTSAC	2 cut(s)	34, 385
TseI	GCWGC	5 cut(s)	221, 304, 467, 524, 769
Tsp45I	GTSAC	2 cut(s)	34, 385
TspDTI	ATGAA	2 cut(s)	612, 672
TspGWI	ACGGA	1 cut(s)	778
TspRI	CASTG	2 cut(s)	620, 747
VpaK11BI	GGWCC	1 cut(s)	144
XhoI	CTCGAG	1 cut(s)	620
XspI	CTAG	2 cut(s)	71, 200
Zsp2I	ATGCAT	1 cut(s)	423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.