Rorug01G0294200

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000056
Physical Location & Seq
Forward (+)
41002320 .. 41005311
2992 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0294200.1

Sequence Viewer

Length: 951 bp
ATGGAACCGCAGCATGACAAGGACGCGTCGTCCATGGCGCCCAAGACGAAGAGCGCCAATTCCTACCAGATGCTGAACGGGCCGTCGCTGACGCACTCGGCCTGGTTCGAAATCCGGTTGTTCTACGTCCGGATCGCGCCGTGCGTCATCGACAGCGTGCCGGACCACCTCACGCTCTGCCACCTCCGCCGCGACATCGGCGTGTCTCTCGAGATCAACGGCGCCAGGATTCCGAACTCGGACTCGGCCTCGCTCACGCTCCGCCGCGACCGGCTGGACAAGGAGTCGTCGGAGGTGACGTACGTGGCCACCGACAGCGTGAGGGTCACCGGCGCGGTTGAGTTTGAGGTCTACGAGAACAATGACATGGTGCTGTGCGGGTCGTTGGAGAGAATGGAAGGCGTTTGGCTTAATGGGAATGCGGGGATGGAGAATGATTCCAAGACGGGTTGGAGTATGGATTGTTATATGGCTGCGTCTATTAATTCCGGCTCTTCTGCGTTTTTCCGGCCGAAACTCGGGGTTTCGGCACCATCTATAGAGGTTTATATCGCCGGGTGCTGCTCTGGTGTGCCGGTGATATTGACAAAGACGATACAGATTAGTCCCAGGCGGAAGTGCCCAAGGCACGCCACGCTGGATGCGATTCCCGAGGAGGAGGAGGTTGGGAAGGAGCATAGTAAGAGCTGTAATGGGTTAATTCGTCAACGGAAAGTGCAGATGACAGAATCTGAAATTGATGAGTATGAATCAGATGGTAAAATTGGACATGGTTTCTACTCTGATGAAATGTACACCGGTGAAGATGGTCAACTCACTTGGTTTAATGCTGGTGTTAGAGTTGGAGTTGGAATTGGCCTTGGGATGTGCCTTGGAATAGGGATTGGTGTTGGACTGCTCATGCGTTCCTATCAAGCGACCACTAGTAATTTCAGGAGGAGGTTTCTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

316

Amino Acids

34.81

Weight (kDa)

5.59

Isoelectric Point (pI)

43.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 37, 221, 529
AccI GTMKAC 1 cut(s) 351
AccII CGCG 5 cut(s) 26, 137, 192, 267, 335
AccIII TCCGGA 1 cut(s) 129
AciI CCGC 9 cut(s) 8, 187, 190, 262, 265, 335, 378, 422, 613
AclWI GGATC 1 cut(s) 140
AcoI YGGCCR 2 cut(s) 306, 509
AcyI GRCGYC 2 cut(s) 38, 222
AfaI GTAC 2 cut(s) 302, 794
AfiI CCNNNNNNNGG 1 cut(s) 518
AflIII ACRYGT 1 cut(s) 24
AgeI ACCGGT 1 cut(s) 797
AhdI GACNNNNNGTC 2 cut(s) 28, 283
AhlI ACTAGT 1 cut(s) 923
AjnI CCWGG 3 cut(s) 101, 224, 608
AluBI AGCT 1 cut(s) 687
AluI AGCT 1 cut(s) 687
Alw26I GTCTC 1 cut(s) 210
AlwI GGATC 1 cut(s) 140
AlwNI CAGNNNCTG 2 cut(s) 73, 731
Ama87I CYCGRG 3 cut(s) 209, 518, 650
Aor13HI TCCGGA 1 cut(s) 129
AoxI GGCC 6 cut(s) 80, 99, 246, 306, 509, 856
ApeKI GCWGC 3 cut(s) 10, 473, 561
AseI ATTAAT 1 cut(s) 483
AsiGI ACCGGT 1 cut(s) 797
AspLEI GCGC 5 cut(s) 40, 56, 139, 224, 335
AspS9I GGNCC 2 cut(s) 80, 163
AsuC2I CCSGG 1 cut(s) 556
AsuHPI GGTGA 4 cut(s) 307, 319, 589, 812
AsuII TTCGAA 1 cut(s) 108
AvaI CYCGRG 3 cut(s) 209, 518, 650
AvaII GGWCC 1 cut(s) 163
BaeGI GKGCMC 1 cut(s) 623
BalI TGGCCA 1 cut(s) 308
BanI GGYRCC 3 cut(s) 37, 221, 529
BbvI GCAGC 3 cut(s) 22, 460, 548
BccI CCATC 4 cut(s) 421, 541, 749, 800
BceAI ACGGC 3 cut(s) 67, 124, 235
BciT130I CCWGG 3 cut(s) 103, 226, 610
BcnI CCSGG 1 cut(s) 556
BcoDI GTCTC 1 cut(s) 210
BcuI ACTAGT 1 cut(s) 923
BfaI CTAG 1 cut(s) 924
BfmI CTRYAG 1 cut(s) 537
BfoI RGCGCY 3 cut(s) 41, 57, 225
BisI GCNGC 5 cut(s) 11, 190, 265, 474, 562
BlsI GCNGC 5 cut(s) 12, 191, 266, 475, 563
Bme1390I CCNGG 4 cut(s) 103, 226, 556, 610
Bme18I GGWCC 1 cut(s) 163
BmeRI GACNNNNNGTC 2 cut(s) 28, 283
BmeT110I CYCGRG 3 cut(s) 209, 518, 650
BmgT120I GGNCC 2 cut(s) 80, 163
BmiI GGNNCC 4 cut(s) 6, 39, 223, 531
BmrFI CCNGG 4 cut(s) 103, 226, 556, 610
BmsI GCATC 2 cut(s) 60, 631
Bpu14I TTCGAA 1 cut(s) 108
BpuMI CCSGG 1 cut(s) 556
BsaAI YACGTR 1 cut(s) 304
BsaHI GRCGYC 2 cut(s) 38, 222
BsaJI CCNNGG 6 cut(s) 33, 608, 623, 651, 859, 871
BsaWI WCCGGW 3 cut(s) 114, 129, 797
BsaXI ACNNNNNCTCC 2 cut(s) 284, 314
Bsc4I CCNNNNNNNGG 1 cut(s) 518
Bse118I RCCGGY 4 cut(s) 270, 329, 574, 797
BseAI TCCGGA 1 cut(s) 129
BseBI CCWGG 3 cut(s) 103, 226, 610
BseDI CCNNGG 6 cut(s) 33, 608, 623, 651, 859, 871
BseGI GGATG 3 cut(s) 432, 646, 870
BseLI CCNNNNNNNGG 1 cut(s) 518
BseRI GAGGAG 3 cut(s) 668, 671, 674
BseSI GKGCMC 1 cut(s) 623
BseX3I CGGCCG 1 cut(s) 509
BseXI GCAGC 3 cut(s) 22, 460, 548
BsgI GTGCAG 1 cut(s) 737
Bsh1236I CGCG 5 cut(s) 26, 137, 192, 267, 335
Bsh1285I CGRYCG 2 cut(s) 271, 512
BshFI GGCC 6 cut(s) 82, 101, 248, 308, 511, 858
BshNI GGYRCC 3 cut(s) 37, 221, 529
BshTI ACCGGT 1 cut(s) 797
BsiEI CGRYCG 2 cut(s) 271, 512
BsiHKCI CYCGRG 3 cut(s) 209, 518, 650
BsiWI CGTACG 1 cut(s) 300
BslFI GGGAC 1 cut(s) 591
BslI CCNNNNNNNGG 1 cut(s) 518
BsmAI GTCTC 1 cut(s) 210
BsmFI GGGAC 1 cut(s) 591
BsmI GAATGC 1 cut(s) 424
BsnI GGCC 6 cut(s) 82, 101, 248, 308, 511, 858
BsoBI CYCGRG 3 cut(s) 209, 518, 650
Bsp119I TTCGAA 1 cut(s) 108
Bsp1286I GDGCHC 1 cut(s) 623
Bsp13I TCCGGA 1 cut(s) 129
Bsp1407I TGTACA 1 cut(s) 792
Bsp143I GATC 2 cut(s) 132, 213
Bsp19I CCATGG 1 cut(s) 33
BspACI CCGC 9 cut(s) 8, 187, 190, 262, 265, 335, 378, 422, 613
BspANI GGCC 6 cut(s) 82, 101, 248, 308, 511, 858
BspEI TCCGGA 1 cut(s) 129
BspFNI CGCG 5 cut(s) 26, 137, 192, 267, 335
BspLI GGNNCC 4 cut(s) 6, 39, 223, 531
BspPI GGATC 1 cut(s) 140
BspQI GCTCTTC 2 cut(s) 44, 499
BspT104I TTCGAA 1 cut(s) 108
BspT107I GGYRCC 3 cut(s) 37, 221, 529
BsrFI RCCGGY 4 cut(s) 270, 329, 574, 797
BsrGI TGTACA 1 cut(s) 792
BssAI RCCGGY 4 cut(s) 270, 329, 574, 797
BssECI CCNNGG 6 cut(s) 33, 608, 623, 651, 859, 871
BssMI GATC 2 cut(s) 132, 213
BssNI GRCGYC 2 cut(s) 38, 222
BssT1I CCWWGG 4 cut(s) 33, 623, 859, 871
Bst2UI CCWGG 3 cut(s) 103, 226, 610
Bst6I CTCTTC 2 cut(s) 44, 499
BstACI GRCGYC 2 cut(s) 38, 222
BstAUI TGTACA 1 cut(s) 792
BstBAI YACGTR 1 cut(s) 304
BstBI TTCGAA 1 cut(s) 108
BstC8I GCNNGC 2 cut(s) 158, 630
BstDSI CCRYGG 1 cut(s) 33
BstEII GGTNACC 1 cut(s) 325
BstF5I GGATG 3 cut(s) 432, 646, 870
BstFNI CGCG 5 cut(s) 26, 137, 192, 267, 335
BstH2I RGCGCY 3 cut(s) 41, 57, 225
BstHHI GCGC 5 cut(s) 40, 56, 139, 224, 335
BstKTI GATC 2 cut(s) 135, 216
BstMAI GTCTC 1 cut(s) 210
BstMBI GATC 2 cut(s) 132, 213
BstMCI CGRYCG 2 cut(s) 271, 512
BstMWI GCNNNNNNNGC 4 cut(s) 79, 186, 198, 634
BstNI CCWGG 3 cut(s) 103, 226, 610
BstPI GGTNACC 1 cut(s) 325
BstSCI CCNGG 4 cut(s) 101, 224, 554, 608
BstSFI CTRYAG 1 cut(s) 537
BstSLI GKGCMC 1 cut(s) 623
BstUI CGCG 5 cut(s) 26, 137, 192, 267, 335
BstV1I GCAGC 3 cut(s) 22, 460, 548
BstZI CGGCCG 1 cut(s) 509
BsuRI GGCC 6 cut(s) 82, 101, 248, 308, 511, 858
BtgI CCRYGG 1 cut(s) 33
BtsCI GGATG 3 cut(s) 432, 646, 870
Cac8I GCNNGC 2 cut(s) 158, 630
CaiI CAGNNNCTG 2 cut(s) 73, 731
CfoI GCGC 5 cut(s) 40, 56, 139, 224, 335
Cfr10I RCCGGY 4 cut(s) 270, 329, 574, 797
Cfr13I GGNCC 2 cut(s) 80, 163
CseI GACGC 5 cut(s) 15, 32, 100, 133, 465
Csp6I GTAC 2 cut(s) 301, 793
CspAI ACCGGT 1 cut(s) 797
CviAII CATG 5 cut(s) 14, 34, 367, 770, 901
CviQI GTAC 2 cut(s) 301, 793
DinI GGCGCC 2 cut(s) 39, 223
DpnI GATC 2 cut(s) 134, 215
DpnII GATC 2 cut(s) 132, 213
DriI GACNNNNNGTC 2 cut(s) 28, 283
EaeI YGGCCR 2 cut(s) 306, 509
EagI CGGCCG 1 cut(s) 509
Eam1104I CTCTTC 2 cut(s) 44, 499
Eam1105I GACNNNNNGTC 2 cut(s) 28, 283
EarI CTCTTC 2 cut(s) 44, 499
EciI GGCGGA 3 cut(s) 176, 251, 628
EclXI CGGCCG 1 cut(s) 509
Eco130I CCWWGG 4 cut(s) 33, 623, 859, 871
Eco47I GGWCC 1 cut(s) 163
Eco52I CGGCCG 1 cut(s) 509
Eco88I CYCGRG 3 cut(s) 209, 518, 650
Eco91I GGTNACC 1 cut(s) 325
EcoO65I GGTNACC 1 cut(s) 325
EcoRII CCWGG 3 cut(s) 101, 224, 608
EcoT14I CCWWGG 4 cut(s) 33, 623, 859, 871
EgeI GGCGCC 2 cut(s) 39, 223
EheI GGCGCC 2 cut(s) 39, 223
ErhI CCWWGG 4 cut(s) 33, 623, 859, 871
FaeI CATG 5 cut(s) 17, 37, 370, 773, 904
FaqI GGGAC 1 cut(s) 591
FatI CATG 5 cut(s) 13, 33, 366, 769, 900
FauI CCCGC 2 cut(s) 371, 415
FblI GTMKAC 1 cut(s) 351
Fnu4HI GCNGC 5 cut(s) 11, 190, 265, 474, 562
FokI GGATG 3 cut(s) 439, 653, 877
Fsp4HI GCNGC 5 cut(s) 11, 190, 265, 474, 562
FspBI CTAG 1 cut(s) 924
GlaI GCGC 5 cut(s) 39, 55, 138, 223, 334
GluI GCNGC 5 cut(s) 11, 190, 265, 474, 562
HaeII RGCGCY 3 cut(s) 41, 57, 225
HaeIII GGCC 6 cut(s) 82, 101, 248, 308, 511, 858
HgaI GACGC 5 cut(s) 15, 32, 100, 133, 465
HhaI GCGC 5 cut(s) 40, 56, 139, 224, 335
Hin1I GRCGYC 2 cut(s) 38, 222
Hin1II CATG 5 cut(s) 17, 37, 370, 773, 904
Hin6I GCGC 5 cut(s) 38, 54, 137, 222, 333
HinP1I GCGC 5 cut(s) 38, 54, 137, 222, 333
HincII GTYRAC 2 cut(s) 707, 812
HindII GTYRAC 2 cut(s) 707, 812
HinfI GANTC 7 cut(s) 229, 242, 284, 437, 646, 728, 749
HphI GGTGA 4 cut(s) 307, 319, 589, 812
Hpy166II GTNNAC 4 cut(s) 352, 707, 795, 812
Hpy188I TCNGA 6 cut(s) 234, 241, 292, 733, 754, 784
Hpy188III TCNNGA 5 cut(s) 130, 209, 211, 650, 934
Hpy8I GTNNAC 4 cut(s) 352, 707, 795, 812
Hpy99I CGWCG 3 cut(s) 31, 88, 292
HpyAV CCTTC 2 cut(s) 392, 664
HpyCH4IV ACGT 3 cut(s) 126, 299, 303
HpyCH4V TGCA 1 cut(s) 718
HpyF10VI GCNNNNNNNGC 4 cut(s) 79, 186, 198, 634
HpySE526I ACGT 3 cut(s) 126, 299, 303
Hsp92I GRCGYC 2 cut(s) 38, 222
Hsp92II CATG 5 cut(s) 17, 37, 370, 773, 904
HspAI GCGC 5 cut(s) 38, 54, 137, 222, 333
KasI GGCGCC 2 cut(s) 37, 221
Kpn2I TCCGGA 1 cut(s) 129
Kzo9I GATC 2 cut(s) 132, 213
LguI GCTCTTC 2 cut(s) 44, 499
LmnI GCTCC 2 cut(s) 264, 673
Lsp1109I GCAGC 3 cut(s) 22, 460, 548
LweI GCATC 2 cut(s) 60, 631
MaeI CTAG 1 cut(s) 924
MaeII ACGT 3 cut(s) 126, 299, 303
MaeIII GTNAC 2 cut(s) 295, 325
MalI GATC 2 cut(s) 134, 215
MboI GATC 2 cut(s) 132, 213
MboII GAAGA 3 cut(s) 61, 486, 815
MhlI GDGCHC 1 cut(s) 623
MlsI TGGCCA 1 cut(s) 308
MluCI AATT 7 cut(s) 58, 484, 699, 735, 762, 852, 928
MluI ACGCGT 1 cut(s) 24
MluNI TGGCCA 1 cut(s) 308
Mly113I GGCGCC 2 cut(s) 38, 222
MlyI GAGTC 2 cut(s) 236, 293
MmeI TCCRAC 6 cut(s) 270, 366, 431, 823, 829, 871
Mox20I TGGCCA 1 cut(s) 308
MroI TCCGGA 1 cut(s) 129
MscI TGGCCA 1 cut(s) 308
MseI TTAA 4 cut(s) 411, 483, 698, 825
MslI CAYNNNNRTG 1 cut(s) 200
Msp20I TGGCCA 1 cut(s) 308
MspR9I CCNGG 4 cut(s) 103, 226, 556, 610
Mva1269I GAATGC 1 cut(s) 424
MvaI CCWGG 3 cut(s) 103, 226, 610
MvnI CGCG 5 cut(s) 26, 137, 192, 267, 335
MwoI GCNNNNNNNGC 4 cut(s) 79, 186, 198, 634
NarI GGCGCC 2 cut(s) 38, 222
NciI CCSGG 1 cut(s) 556
NcoI CCATGG 1 cut(s) 33
NdeII GATC 2 cut(s) 132, 213
NlaIII CATG 5 cut(s) 17, 37, 370, 773, 904
NlaIV GGNNCC 4 cut(s) 6, 39, 223, 531
NmeAIII GCCGAG 2 cut(s) 77, 224
NmuCI GTSAC 2 cut(s) 295, 325
NspV TTCGAA 1 cut(s) 108
PaeR7I CTCGAG 1 cut(s) 209
PciSI GCTCTTC 2 cut(s) 44, 499
PcsI WCGNNNNNNNCGW 4 cut(s) 141, 296, 309, 641
PctI GAATGC 1 cut(s) 424
PfeI GAWTC 5 cut(s) 229, 437, 646, 728, 749
Pfl23II CGTACG 1 cut(s) 300
PinAI ACCGGT 1 cut(s) 797
PkrI GCNGC 5 cut(s) 12, 191, 266, 475, 563
PleI GAGTC 2 cut(s) 236, 292
PluTI GGCGCC 2 cut(s) 41, 225
PpsI GAGTC 2 cut(s) 236, 292
Ppu21I YACGTR 1 cut(s) 304
PshBI ATTAAT 1 cut(s) 483
Psp6I CCWGG 3 cut(s) 101, 224, 608
PspEI GGTNACC 1 cut(s) 325
PspGI CCWGG 3 cut(s) 101, 224, 608
PspLI CGTACG 1 cut(s) 300
PspN4I GGNNCC 4 cut(s) 6, 39, 223, 531
PspPI GGNCC 2 cut(s) 80, 163
PstNI CAGNNNCTG 2 cut(s) 73, 731
RsaI GTAC 2 cut(s) 302, 794
RsaNI GTAC 2 cut(s) 301, 793
RseI CAYNNNNRTG 1 cut(s) 200
SapI GCTCTTC 2 cut(s) 44, 499
SaqAI TTAA 4 cut(s) 411, 483, 698, 825
SatI GCNGC 5 cut(s) 11, 190, 265, 474, 562
Sau3AI GATC 2 cut(s) 132, 213
Sau96I GGNCC 2 cut(s) 80, 163
SchI GAGTC 2 cut(s) 236, 293
ScrFI CCNGG 4 cut(s) 103, 226, 556, 610
SduI GDGCHC 1 cut(s) 623
SfaNI GCATC 2 cut(s) 60, 631
SfcI CTRYAG 1 cut(s) 537
SfoI GGCGCC 2 cut(s) 39, 223
Sfr274I CTCGAG 1 cut(s) 209
SfuI TTCGAA 1 cut(s) 108
SgrAI CRCCGGYG 2 cut(s) 329, 797
SinI GGWCC 1 cut(s) 163
SlaI CTCGAG 1 cut(s) 209
SmiMI CAYNNNNRTG 1 cut(s) 200
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
SpeI ACTAGT 1 cut(s) 923
Sse9I AATT 7 cut(s) 58, 484, 699, 735, 762, 852, 928
SsiI CCGC 9 cut(s) 8, 187, 190, 262, 265, 335, 378, 422, 613
SspDI GGCGCC 2 cut(s) 37, 221
SspMI CTAG 1 cut(s) 924
StyD4I CCNGG 4 cut(s) 101, 224, 554, 608
StyI CCWWGG 4 cut(s) 33, 623, 859, 871
TaiI ACGT 3 cut(s) 129, 302, 306
TaqI TCGA 3 cut(s) 108, 150, 210
TasI AATT 7 cut(s) 58, 484, 699, 735, 762, 852, 928
TatI WGTACW 1 cut(s) 792
TauI GCSGC 2 cut(s) 192, 267
TfiI GAWTC 5 cut(s) 229, 437, 646, 728, 749
Tru1I TTAA 4 cut(s) 411, 483, 698, 825
Tru9I TTAA 4 cut(s) 411, 483, 698, 825
TseFI GTSAC 2 cut(s) 295, 325
TseI GCWGC 3 cut(s) 10, 473, 561
Tsp45I GTSAC 2 cut(s) 295, 325
TspDTI ATGAA 2 cut(s) 762, 801
TspGWI ACGGA 1 cut(s) 724
VpaK11BI GGWCC 1 cut(s) 163
VspI ATTAAT 1 cut(s) 483
XhoI CTCGAG 1 cut(s) 209
XmiI GTMKAC 1 cut(s) 351
XspI CTAG 1 cut(s) 924
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.