Rorug02G0271400

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000056
Physical Location & Seq
Reverse (-)
28819255 .. 28826277
7023 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0271400.1

Sequence Viewer

Length: 1017 bp
ATGGATTACGACGACTTGAGGACGATTGTGCACACCTCAGGGGTGGACGTGTTCACGTTCATCGACGCGGCGATCGCGGTGGCTGCGGTGGATGAGGGCACCGAGCTCAGGCGCCGGAGAGACGGTATCGTGGAGCGTCTCTACGGCGCCACGTGTGCTCCGCCGCTGCCGCCGCCGCGGTGCCAGAACTGCGACGGAGATGGGATGAACGCGAACCGGCAGCCCAAAGGAGTTTCGCCGGCGACGCCGCAGTCGGTGGATAACAGAGATGAAGAGGATGAGGAGGAGGAAGAGGAGTTGGATCCCTGCGCTGGATTGTTCGATGATGAGCCCAAGAAGATTCTTGATATCAAGAAGCTGCTTGAGGATCCTGATCAGTCTGAGGATTCTCTGGTTGAATTGCTTCAAAGCCTAGTTGACATGGATATATCATTCCAAGACCTCAAGGATACTGATATTGGGAGGCAAGTGAGTCAATTACGCAAGCAACATCAAGGCGAGGTTGTTCGGAAATTGGCGAAGCAACTTGTCAGGAAATGGAAAGGTATTGTGGATGAATGGGTGAAGTTACATGGAGAAGAGCCAACTAATTCAGTCATGGTTGACGGAGACTCACCACAGCAGAAAATTCACCAGAATGGTCATCACCAGGTGCCTGATTTTGGTTACTCCCCAAATCCTCATAATGGGAGTTCCGGGTCAGACAAGAACAATTCAGAACCAGAACGCAAGCCCAAGGTGATTCCTAGGAGAGAAGTTCCACCAAAACCAATCCAATCTGTGTCTGCTGCTCAAAATAGACAGAGAGAACAGAGGGAAAGAAATTTTGACGCTGACGATAAACTGGCTTCAGCACGAAAACGACTTCAAGCGAATTACAAAGAAGCTGAGAATGCCAAAAGGCAAAGAACAATTCAAGTGATGGACATCCATGAGATACCAAAACCAAAGAACTCCTTCATCGCCAAGAACAAAGGCGGCGGAGGTAGCGGTTCTCACCAGGGCAGGCATTGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

338

Amino Acids

38.02

Weight (kDa)

5.57

Isoelectric Point (pI)

49.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Med26 PF08711 133 - 184 1.9e-12 TFIIS helical bundle-like domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 250
AccB1I GGYRCC 5 cut(s) 98, 111, 146, 180, 652
AccII CGCG 4 cut(s) 68, 77, 178, 212
AclWI GGATC 4 cut(s) 296, 309, 362, 375
AcsI RAATTY 2 cut(s) 627, 823
AcuI CTGAAG 1 cut(s) 834
AcvI CACGTG 1 cut(s) 153
AcyI GRCGYC 3 cut(s) 112, 147, 245
AdeI CACNNNGTG 1 cut(s) 652
AfiI CCNNNNNNNGG 4 cut(s) 108, 311, 662, 686
AflIII ACRYGT 2 cut(s) 48, 152
AgsI TTSAA 4 cut(s) 398, 407, 869, 917
AjiI CACGTC 1 cut(s) 49
AjnI CCWGG 2 cut(s) 648, 999
AluBI AGCT 3 cut(s) 106, 358, 887
AluI AGCT 3 cut(s) 106, 358, 887
Alw21I GWGCWC 3 cut(s) 33, 108, 160
Alw26I GTCTC 3 cut(s) 114, 143, 603
Alw44I GTGCAC 1 cut(s) 29
AlwI GGATC 4 cut(s) 296, 309, 362, 375
ApaLI GTGCAC 1 cut(s) 29
ApeKI GCWGC 5 cut(s) 83, 166, 220, 358, 788
ApoI RAATTY 2 cut(s) 627, 823
AsiSI GCGATCGC 1 cut(s) 75
Asp700I GAANNNNTTC 2 cut(s) 402, 956
AspA2I CCTAGG 1 cut(s) 746
AspLEI GCGC 3 cut(s) 114, 149, 311
AsuC2I CCSGG 1 cut(s) 697
AsuHPI GGTGA 6 cut(s) 574, 606, 623, 638, 751, 989
AvrII CCTAGG 1 cut(s) 746
AxyI CCTNAGG 1 cut(s) 37
BaeGI GKGCMC 2 cut(s) 33, 101
BamHI GGATCC 2 cut(s) 301, 367
BanI GGYRCC 5 cut(s) 98, 111, 146, 180, 652
BanII GRGCYC 2 cut(s) 108, 333
BbrPI CACGTG 1 cut(s) 153
Bbv12I GWGCWC 3 cut(s) 33, 108, 160
BbvI GCAGC 5 cut(s) 70, 153, 232, 345, 775
BccI CCATC 2 cut(s) 194, 916
BceAI ACGGC 1 cut(s) 160
BciT130I CCWGG 2 cut(s) 650, 1001
BciVI GTATCC 1 cut(s) 442
BclI TGATCA 1 cut(s) 373
BcnI CCSGG 1 cut(s) 697
BcoDI GTCTC 3 cut(s) 114, 143, 603
BfaI CTAG 2 cut(s) 413, 747
BfoI RGCGCY 2 cut(s) 115, 150
BfuI GTATCC 1 cut(s) 442
BlnI CCTAGG 1 cut(s) 746
Bme1390I CCNGG 3 cut(s) 650, 697, 1001
BmgBI CACGTC 1 cut(s) 49
BmiI GGNNCC 7 cut(s) 100, 113, 148, 182, 303, 369, 654
BmrFI CCNGG 3 cut(s) 650, 697, 1001
Bpu10I CCTNAGC 1 cut(s) 107
BpuEI CTTGAG 3 cut(s) 37, 383, 428
BpuMI CCSGG 1 cut(s) 697
BsaAI YACGTR 1 cut(s) 153
BsaBI GATNNNNATC 2 cut(s) 372, 926
BsaHI GRCGYC 3 cut(s) 112, 147, 245
BsaJI CCNNGG 4 cut(s) 176, 735, 746, 1000
BsaXI ACNNNNNCTCC 4 cut(s) 109, 139, 142, 172
Bsc4I CCNNNNNNNGG 4 cut(s) 108, 311, 662, 686
Bse118I RCCGGY 2 cut(s) 216, 238
Bse1I ACTGG 1 cut(s) 849
Bse21I CCTNAGG 1 cut(s) 37
Bse8I GATNNNNATC 2 cut(s) 372, 926
BseBI CCWGG 2 cut(s) 650, 1001
BseDI CCNNGG 4 cut(s) 176, 735, 746, 1000
BseGI GGATG 5 cut(s) 97, 210, 283, 559, 927
BseJI GATNNNNATC 2 cut(s) 372, 926
BseLI CCNNNNNNNGG 4 cut(s) 108, 311, 662, 686
BseMII CTCAG 4 cut(s) 51, 121, 372, 879
BseNI ACTGG 1 cut(s) 849
BseRI GAGGAG 3 cut(s) 296, 299, 308
BseSI GKGCMC 2 cut(s) 33, 101
BseXI GCAGC 5 cut(s) 70, 153, 232, 345, 775
Bsh1236I CGCG 4 cut(s) 68, 77, 178, 212
Bsh1285I CGRYCG 1 cut(s) 75
BshNI GGYRCC 5 cut(s) 98, 111, 146, 180, 652
BsiEI CGRYCG 1 cut(s) 75
BsiHKAI GWGCWC 3 cut(s) 33, 108, 160
BsiSI CCGG 4 cut(s) 115, 217, 239, 696
BslI CCNNNNNNNGG 4 cut(s) 108, 311, 662, 686
BsmAI GTCTC 3 cut(s) 114, 143, 603
BsmBI CGTCTC 2 cut(s) 114, 143
BsmI GAATGC 1 cut(s) 898
Bsp1286I GDGCHC 5 cut(s) 33, 101, 108, 160, 333
Bsp143I GATC 4 cut(s) 72, 301, 367, 373
BspCNI CTCAG 4 cut(s) 50, 120, 373, 880
BspFNI CGCG 4 cut(s) 68, 77, 178, 212
BspLI GGNNCC 7 cut(s) 100, 113, 148, 182, 303, 369, 654
BspPI GGATC 4 cut(s) 296, 309, 362, 375
BspQI GCTCTTC 1 cut(s) 573
BspT107I GGYRCC 5 cut(s) 98, 111, 146, 180, 652
BsrFI RCCGGY 2 cut(s) 216, 238
BsrI ACTGG 1 cut(s) 849
BssAI RCCGGY 2 cut(s) 216, 238
BssECI CCNNGG 4 cut(s) 176, 735, 746, 1000
BssMI GATC 4 cut(s) 72, 301, 367, 373
BssNI GRCGYC 3 cut(s) 112, 147, 245
BssT1I CCWWGG 2 cut(s) 735, 746
Bst2UI CCWGG 2 cut(s) 650, 1001
Bst4CI ACNGT 1 cut(s) 125
Bst6I CTCTTC 3 cut(s) 267, 285, 573
BstACI GRCGYC 3 cut(s) 112, 147, 245
BstBAI YACGTR 1 cut(s) 153
BstC8I GCNNGC 4 cut(s) 240, 485, 731, 1007
BstDEI CTNAG 4 cut(s) 37, 107, 381, 888
BstDSI CCRYGG 1 cut(s) 176
BstF5I GGATG 5 cut(s) 97, 210, 283, 559, 927
BstFNI CGCG 4 cut(s) 68, 77, 178, 212
BstH2I RGCGCY 2 cut(s) 115, 150
BstHHI GCGC 3 cut(s) 114, 149, 311
BstKTI GATC 4 cut(s) 75, 304, 370, 376
BstMAI GTCTC 3 cut(s) 114, 143, 603
BstMBI GATC 4 cut(s) 72, 301, 367, 373
BstMCI CGRYCG 1 cut(s) 75
BstNI CCWGG 2 cut(s) 650, 1001
BstSCI CCNGG 3 cut(s) 648, 695, 999
BstSLI GKGCMC 2 cut(s) 33, 101
BstUI CGCG 4 cut(s) 68, 77, 178, 212
BstV1I GCAGC 5 cut(s) 70, 153, 232, 345, 775
BstX2I RGATCY 2 cut(s) 301, 367
BstYI RGATCY 2 cut(s) 301, 367
Bsu36I CCTNAGG 1 cut(s) 37
BsuI GTATCC 1 cut(s) 442
BtgI CCRYGG 1 cut(s) 176
BtgZI GCGATG 1 cut(s) 946
BtrI CACGTC 1 cut(s) 49
BtsCI GGATG 5 cut(s) 97, 210, 283, 559, 927
Cac8I GCNNGC 4 cut(s) 240, 485, 731, 1007
CfoI GCGC 3 cut(s) 114, 149, 311
Cfr10I RCCGGY 2 cut(s) 216, 238
Cfr42I CCGCGG 1 cut(s) 179
CseI GACGC 4 cut(s) 74, 125, 253, 839
CsiI ACCWGGT 1 cut(s) 648
CviAII CATG 4 cut(s) 421, 572, 598, 932
DdeI CTNAG 4 cut(s) 37, 107, 381, 888
DinI GGCGCC 2 cut(s) 113, 148
DpnI GATC 4 cut(s) 74, 303, 369, 375
DpnII GATC 4 cut(s) 72, 301, 367, 373
DraIII CACNNNGTG 1 cut(s) 652
DrdI GACNNNNNNGTC 1 cut(s) 250
DseDI GACNNNNNNGTC 1 cut(s) 250
Eam1104I CTCTTC 3 cut(s) 267, 285, 573
EarI CTCTTC 3 cut(s) 267, 285, 573
EciI GGCGGA 2 cut(s) 150, 996
Ecl136II GAGCTC 1 cut(s) 106
Eco130I CCWWGG 2 cut(s) 735, 746
Eco24I GRGCYC 2 cut(s) 108, 333
Eco32I GATATC 1 cut(s) 349
Eco53kI GAGCTC 1 cut(s) 106
Eco57I CTGAAG 1 cut(s) 834
Eco72I CACGTG 1 cut(s) 153
Eco81I CCTNAGG 1 cut(s) 37
EcoICRI GAGCTC 1 cut(s) 106
EcoRII CCWGG 2 cut(s) 648, 999
EcoRV GATATC 1 cut(s) 349
EcoT14I CCWWGG 2 cut(s) 735, 746
EcoT38I GRGCYC 2 cut(s) 108, 333
EgeI GGCGCC 2 cut(s) 113, 148
EheI GGCGCC 2 cut(s) 113, 148
ErhI CCWWGG 2 cut(s) 735, 746
Esp3I CGTCTC 2 cut(s) 114, 143
FaeI CATG 4 cut(s) 424, 575, 601, 935
FaiI YATR 6 cut(s) 422, 428, 573, 599, 684, 933
FalI AAGNNNNNCTT 2 cut(s) 941, 973
FatI CATG 4 cut(s) 420, 571, 597, 931
FbaI TGATCA 1 cut(s) 373
FokI GGATG 5 cut(s) 104, 217, 290, 566, 914
FriOI GRGCYC 2 cut(s) 108, 333
FspBI CTAG 2 cut(s) 413, 747
GlaI GCGC 3 cut(s) 113, 148, 310
HaeII RGCGCY 2 cut(s) 115, 150
HapII CCGG 4 cut(s) 115, 217, 239, 696
HgaI GACGC 4 cut(s) 74, 125, 253, 839
HhaI GCGC 3 cut(s) 114, 149, 311
Hin1I GRCGYC 3 cut(s) 112, 147, 245
Hin1II CATG 4 cut(s) 424, 575, 601, 935
Hin6I GCGC 3 cut(s) 112, 147, 309
HinP1I GCGC 3 cut(s) 112, 147, 309
HincII GTYRAC 2 cut(s) 418, 604
HindII GTYRAC 2 cut(s) 418, 604
HinfI GANTC 5 cut(s) 340, 386, 472, 611, 742
HpaII CCGG 4 cut(s) 115, 217, 239, 696
HphI GGTGA 6 cut(s) 574, 606, 623, 638, 751, 989
Hpy166II GTNNAC 5 cut(s) 31, 46, 54, 418, 604
Hpy188I TCNGA 4 cut(s) 382, 510, 703, 718
Hpy188III TCNNGA 4 cut(s) 344, 352, 371, 532
Hpy8I GTNNAC 5 cut(s) 31, 46, 54, 418, 604
Hpy99I CGWCG 4 cut(s) 14, 68, 197, 247
HpyAV CCTTC 1 cut(s) 967
HpyCH4III ACNGT 1 cut(s) 125
HpyCH4IV ACGT 3 cut(s) 48, 56, 152
HpyCH4V TGCA 1 cut(s) 31
HpyF3I CTNAG 4 cut(s) 37, 107, 381, 888
HpySE526I ACGT 3 cut(s) 48, 56, 152
Hsp92I GRCGYC 3 cut(s) 112, 147, 245
Hsp92II CATG 4 cut(s) 424, 575, 601, 935
HspAI GCGC 3 cut(s) 112, 147, 309
KasI GGCGCC 2 cut(s) 111, 146
KroI GCCGGC 1 cut(s) 238
KroNI GCCGGC 1 cut(s) 240
Ksp22I TGATCA 1 cut(s) 373
KspI CCGCGG 1 cut(s) 179
Kzo9I GATC 4 cut(s) 72, 301, 367, 373
LguI GCTCTTC 1 cut(s) 573
LmnI GCTCC 2 cut(s) 133, 163
Lsp1109I GCAGC 5 cut(s) 70, 153, 232, 345, 775
MabI ACCWGGT 1 cut(s) 648
MaeI CTAG 2 cut(s) 413, 747
MaeII ACGT 3 cut(s) 48, 56, 152
MaeIII GTNAC 2 cut(s) 567, 665
MalI GATC 4 cut(s) 74, 303, 369, 375
MboI GATC 4 cut(s) 72, 301, 367, 373
MboII GAAGA 4 cut(s) 284, 302, 349, 590
MflI RGATCY 2 cut(s) 301, 367
MhlI GDGCHC 5 cut(s) 33, 101, 108, 160, 333
MluCI AATT 9 cut(s) 398, 476, 512, 589, 627, 712, 823, 874, 912
Mly113I GGCGCC 2 cut(s) 112, 147
MlyI GAGTC 2 cut(s) 481, 605
MmeI TCCRAC 1 cut(s) 279
MreI CGCCGGCG 1 cut(s) 238
MroNI GCCGGC 1 cut(s) 238
MroXI GAANNNNTTC 2 cut(s) 402, 956
MslI CAYNNNNRTG 1 cut(s) 636
MspA1I CMGCKG 2 cut(s) 166, 178
MspI CCGG 4 cut(s) 115, 217, 239, 696
MspR9I CCNGG 3 cut(s) 650, 697, 1001
Mva1269I GAATGC 1 cut(s) 898
MvaI CCWGG 2 cut(s) 650, 1001
MvnI CGCG 4 cut(s) 68, 77, 178, 212
NaeI GCCGGC 1 cut(s) 240
NarI GGCGCC 2 cut(s) 112, 147
NciI CCSGG 1 cut(s) 697
NdeII GATC 4 cut(s) 72, 301, 367, 373
NgoMIV GCCGGC 1 cut(s) 238
NlaIII CATG 4 cut(s) 424, 575, 601, 935
NlaIV GGNNCC 7 cut(s) 100, 113, 148, 182, 303, 369, 654
PciSI GCTCTTC 1 cut(s) 573
PctI GAATGC 1 cut(s) 898
PdiI GCCGGC 1 cut(s) 240
PdmI GAANNNNTTC 2 cut(s) 402, 956
PfeI GAWTC 3 cut(s) 340, 386, 742
Ple19I CGATCG 1 cut(s) 75
PleI GAGTC 2 cut(s) 480, 605
PluTI GGCGCC 2 cut(s) 115, 150
PmaCI CACGTG 1 cut(s) 153
PmlI CACGTG 1 cut(s) 153
PpsI GAGTC 2 cut(s) 480, 605
Ppu21I YACGTR 1 cut(s) 153
Psp124BI GAGCTC 1 cut(s) 108
Psp6I CCWGG 2 cut(s) 648, 999
PspCI CACGTG 1 cut(s) 153
PspGI CCWGG 2 cut(s) 648, 999
PspN4I GGNNCC 7 cut(s) 100, 113, 148, 182, 303, 369, 654
PsuI RGATCY 2 cut(s) 301, 367
PvuI CGATCG 1 cut(s) 75
RgaI GCGATCGC 1 cut(s) 75
RseI CAYNNNNRTG 1 cut(s) 636
SacI GAGCTC 1 cut(s) 108
SacII CCGCGG 1 cut(s) 179
SapI GCTCTTC 1 cut(s) 573
Sau3AI GATC 4 cut(s) 72, 301, 367, 373
SchI GAGTC 2 cut(s) 481, 605
ScrFI CCNGG 3 cut(s) 650, 697, 1001
SduI GDGCHC 5 cut(s) 33, 101, 108, 160, 333
SexAI ACCWGGT 1 cut(s) 648
SfaAI GCGATCGC 1 cut(s) 75
SfoI GGCGCC 2 cut(s) 113, 148
Sfr303I CCGCGG 1 cut(s) 179
SgfI GCGATCGC 1 cut(s) 75
SgrAI CRCCGGYG 1 cut(s) 238
SgrBI CCGCGG 1 cut(s) 179
SmiMI CAYNNNNRTG 1 cut(s) 636
SmlI CTYRAG 3 cut(s) 16, 362, 443
SmoI CTYRAG 3 cut(s) 16, 362, 443
Sse9I AATT 9 cut(s) 398, 476, 512, 589, 627, 712, 823, 874, 912
SspDI GGCGCC 2 cut(s) 111, 146
SspMI CTAG 2 cut(s) 413, 747
SstI GAGCTC 1 cut(s) 108
StyD4I CCNGG 3 cut(s) 648, 695, 999
StyI CCWWGG 2 cut(s) 735, 746
TaaI ACNGT 1 cut(s) 125
TaiI ACGT 3 cut(s) 51, 59, 155
TaqI TCGA 2 cut(s) 63, 321
TasI AATT 9 cut(s) 398, 476, 512, 589, 627, 712, 823, 874, 912
TauI GCSGC 7 cut(s) 71, 166, 172, 175, 178, 250, 981
TfiI GAWTC 3 cut(s) 340, 386, 742
TseI GCWGC 5 cut(s) 83, 166, 220, 358, 788
TspDTI ATGAA 5 cut(s) 49, 221, 285, 570, 949
TspGWI ACGGA 2 cut(s) 210, 621
VneI GTGCAC 1 cut(s) 29
XapI RAATTY 2 cut(s) 627, 823
XmaJI CCTAGG 1 cut(s) 746
XmnI GAANNNNTTC 2 cut(s) 402, 956
XspI CTAG 2 cut(s) 413, 747
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.