FvH4_5g04830

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000056
Physical Location & Seq
Reverse (-)
2875517 .. 2877856
2340 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g04830.t1

Sequence Viewer

Length: 1029 bp
ATGGCACTCAAAAATCAGAAAACCCAGGAGAAGGCCTGCGTCTTTTGGCGAAGGAGTTGCCTCACCAGTTATTTGAGCATGTCCTCCGAGAGGCATTATTTTTGGAGCGGTGCGACAGATACACATCCTAGAGATCCAAGATTATCACCCAAATATAAAATCCCAAGAGGCACGGACACAAAAATTGGATTGCGTTACTACAAAATATCTGGACGAAGCTGGATCAATGCTCCAGATGCCACTGTTTTTAATGTTCCAAAGCTCATAGCTCGTGCACTAATTTTAGTTACTCTCTCTGATGTCAAGAAATCATCTGAAAGGGGTTTTTATATGGATTACATGGCCAAGCAACTATCAAAAATTGGTGTCCCAGGACATGAGCAGCTGGATGTTCTTGAAAAAATATTTGATATGATTGATGTCACCCACCCTGGGAGGCATATTATTGTGTTCTTAGCAGATGTGACCGTCCAACTCTTAGACAATGAGAGTAATGTTGGTGAAGGAGATGTGACTCTACCGTTTTGGATCAATGGAGGACTTACTGATAATCAGCAAAATATGCTTCTAAGGCTTATGATGGATTTCAGGAGTGGTGTCTCCAAGGGTACTCCTGCAACTTTATCATCCGTTCAGGACTTGGAGAAAGTGAGACTTGATAGTTTGGAAGCTGCAGTTAGACAGATGGAATGTGCTATTTGTATAGAGGGCCTTGATCACTTTTATGCTGCAGAAGAAGGGAATGATCATCATATGATAGCTCGCTTGCCCTGTTCACATATGTATCATGAAGATTGCATTGTCCCATGGCTCGAGAATAATCAAAGGTGTCCCTTGTGCCGATGCACAGTTGTGAAATTGCACAAGGCATCAAAACCCCTAATGAGGCTGCATTGGCCCATGCTCATGTTGTCTGCGGTTGGTTTGCTGACTGCTACACTGATTCCCAGATTGTTTAACTGCAGGTCAAGGATGAAAATATCACCAAATCGTGTGTCAGTCAGTGCTAGCCGTGTATTTGGCTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

343

Amino Acids

38.9

Weight (kDa)

9.04

Isoelectric Point (pI)

44.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 230 - 281 9.3e-10 RING-H2 zinc finger domain
zf-RING_2 PF13639 230 - 281 7e-10 Ring finger domain
zf-C3HC4 PF00097 231 - 280 3.1e-06 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 954
AccBSI CCGCTC 1 cut(s) 108
AciI CCGC 2 cut(s) 108, 917
AclWI GGATC 3 cut(s) 128, 230, 536
AcoI YGGCCR 1 cut(s) 342
AfaI GTAC 1 cut(s) 610
AfiI CCNNNNNNNGG 4 cut(s) 31, 90, 432, 885
AgsI TTSAA 1 cut(s) 398
AjnI CCWGG 3 cut(s) 24, 370, 430
AleI CACNNNNGTG 1 cut(s) 851
AluBI AGCT 6 cut(s) 219, 262, 269, 385, 671, 761
AluI AGCT 6 cut(s) 219, 262, 269, 385, 671, 761
Alw21I GWGCWC 1 cut(s) 277
Alw26I GTCTC 2 cut(s) 604, 646
Alw44I GTGCAC 1 cut(s) 273
AlwI GGATC 3 cut(s) 128, 230, 536
Ama87I CYCGRG 1 cut(s) 812
AoxI GGCC 4 cut(s) 33, 342, 709, 896
ApaLI GTGCAC 1 cut(s) 273
ApeKI GCWGC 4 cut(s) 382, 671, 728, 889
ArsI GACNNNNNNTTYG 2 cut(s) 980, 1012
AspS9I GGNCC 2 cut(s) 709, 897
AsuHPI GGTGA 5 cut(s) 55, 138, 415, 512, 975
AsuNHI GCTAGC 1 cut(s) 1007
AvaI CYCGRG 1 cut(s) 812
BaeGI GKGCMC 1 cut(s) 277
BaeI ACNNNNGTAYC 2 cut(s) 767, 800
BalI TGGCCA 1 cut(s) 344
BauI CACGAG 1 cut(s) 270
Bbv12I GWGCWC 1 cut(s) 277
BbvI GCAGC 4 cut(s) 394, 658, 715, 876
BccI CCATC 2 cut(s) 574, 679
BceAI ACGGC 1 cut(s) 996
BcgI CGANNNNNNTGC 2 cut(s) 39, 73
BciT130I CCWGG 3 cut(s) 26, 372, 432
BclI TGATCA 2 cut(s) 715, 745
BcoDI GTCTC 2 cut(s) 604, 646
BfaI CTAG 2 cut(s) 129, 1008
BfmI CTRYAG 3 cut(s) 672, 729, 961
BfuAI ACCTGC 1 cut(s) 954
BisI GCNGC 4 cut(s) 383, 672, 729, 890
BlsI GCNGC 4 cut(s) 384, 673, 730, 891
Bme1390I CCNGG 3 cut(s) 26, 372, 432
BmeT110I CYCGRG 1 cut(s) 812
BmgT120I GGNCC 2 cut(s) 709, 897
BmrFI CCNGG 3 cut(s) 26, 372, 432
BmsI GCATC 3 cut(s) 226, 833, 878
BmtI GCTAGC 1 cut(s) 1011
BpmI CTGGAG 1 cut(s) 216
BsaBI GATNNNNATC 1 cut(s) 123
BsaJI CCNNGG 6 cut(s) 24, 370, 430, 431, 603, 806
Bsc4I CCNNNNNNNGG 4 cut(s) 31, 90, 432, 885
Bse1I ACTGG 1 cut(s) 66
Bse8I GATNNNNATC 1 cut(s) 123
BseBI CCWGG 3 cut(s) 26, 372, 432
BseDI CCNNGG 6 cut(s) 24, 370, 430, 431, 603, 806
BseGI GGATG 4 cut(s) 124, 394, 626, 978
BseJI GATNNNNATC 1 cut(s) 123
BseLI CCNNNNNNNGG 4 cut(s) 31, 90, 432, 885
BseNI ACTGG 1 cut(s) 66
BseSI GKGCMC 1 cut(s) 277
BseXI GCAGC 4 cut(s) 394, 658, 715, 876
BshFI GGCC 4 cut(s) 35, 344, 711, 898
BsiHKAI GWGCWC 1 cut(s) 277
BsiHKCI CYCGRG 1 cut(s) 812
BslFI GGGAC 3 cut(s) 353, 788, 816
BslI CCNNNNNNNGG 4 cut(s) 31, 90, 432, 885
BsmAI GTCTC 2 cut(s) 604, 646
BsmFI GGGAC 3 cut(s) 353, 788, 816
BsnI GGCC 4 cut(s) 35, 344, 711, 898
BsoBI CYCGRG 1 cut(s) 812
Bsp1286I GDGCHC 1 cut(s) 277
Bsp143I GATC 5 cut(s) 133, 222, 528, 715, 745
Bsp19I CCATGG 1 cut(s) 806
BspACI CCGC 2 cut(s) 108, 917
BspANI GGCC 4 cut(s) 35, 344, 711, 898
BspHI TCATGA 1 cut(s) 787
BspMAI CTGCAG 3 cut(s) 676, 733, 965
BspMI ACCTGC 1 cut(s) 954
BspOI GCTAGC 1 cut(s) 1011
BspPI GGATC 3 cut(s) 128, 230, 536
BsrBI CCGCTC 1 cut(s) 108
BsrI ACTGG 1 cut(s) 66
BssECI CCNNGG 6 cut(s) 24, 370, 430, 431, 603, 806
BssMI GATC 5 cut(s) 133, 222, 528, 715, 745
BssSI CACGAG 1 cut(s) 270
BssT1I CCWWGG 2 cut(s) 603, 806
Bst2BI CACGAG 1 cut(s) 270
Bst2UI CCWGG 3 cut(s) 26, 372, 432
Bst4CI ACNGT 4 cut(s) 244, 469, 522, 850
BstAPI GCANNNNNTGC 1 cut(s) 562
BstC8I GCNNGC 4 cut(s) 37, 763, 767, 1009
BstDEI CTNAG 3 cut(s) 454, 478, 569
BstDSI CCRYGG 1 cut(s) 806
BstENI CCTNNNNNAGG 1 cut(s) 88
BstF5I GGATG 4 cut(s) 124, 394, 626, 978
BstKTI GATC 5 cut(s) 136, 225, 531, 718, 748
BstMAI GTCTC 2 cut(s) 604, 646
BstMBI GATC 5 cut(s) 133, 222, 528, 715, 745
BstMWI GCNNNNNNNGC 4 cut(s) 236, 562, 571, 895
BstNI CCWGG 3 cut(s) 26, 372, 432
BstNSI RCATGY 1 cut(s) 82
BstSCI CCNGG 3 cut(s) 24, 370, 430
BstSFI CTRYAG 3 cut(s) 672, 729, 961
BstSLI GKGCMC 1 cut(s) 277
BstV1I GCAGC 4 cut(s) 394, 658, 715, 876
BstX2I RGATCY 1 cut(s) 133
BstYI RGATCY 1 cut(s) 133
BsuRI GGCC 4 cut(s) 35, 344, 711, 898
BtgI CCRYGG 1 cut(s) 806
BtsCI GGATG 4 cut(s) 124, 394, 626, 978
BtsIMutI CAGTG 3 cut(s) 240, 938, 1009
BveI ACCTGC 1 cut(s) 954
Cac8I GCNNGC 4 cut(s) 37, 763, 767, 1009
CciI TCATGA 1 cut(s) 787
Cfr13I GGNCC 2 cut(s) 709, 897
CseI GACGC 1 cut(s) 28
Csp6I GTAC 1 cut(s) 609
CviAII CATG 7 cut(s) 79, 340, 377, 788, 807, 901, 907
CviQI GTAC 1 cut(s) 609
DdeI CTNAG 3 cut(s) 454, 478, 569
DpnI GATC 5 cut(s) 135, 224, 530, 717, 747
DpnII GATC 5 cut(s) 133, 222, 528, 715, 745
EaeI YGGCCR 1 cut(s) 342
Eco130I CCWWGG 2 cut(s) 603, 806
Eco147I AGGCCT 1 cut(s) 35
Eco88I CYCGRG 1 cut(s) 812
EcoNI CCTNNNNNAGG 1 cut(s) 88
EcoO109I RGGNCCY 1 cut(s) 709
EcoRII CCWGG 3 cut(s) 24, 370, 430
EcoT14I CCWWGG 2 cut(s) 603, 806
ErhI CCWWGG 2 cut(s) 603, 806
FaeI CATG 7 cut(s) 82, 343, 380, 791, 810, 904, 910
FalI AAGNNNNNCTT 2 cut(s) 639, 671
FaqI GGGAC 3 cut(s) 353, 788, 816
FatI CATG 7 cut(s) 78, 339, 376, 787, 806, 900, 906
FauNDI CATATG 2 cut(s) 753, 780
FbaI TGATCA 2 cut(s) 715, 745
Fnu4HI GCNGC 4 cut(s) 383, 672, 729, 890
FokI GGATG 4 cut(s) 111, 401, 613, 985
Fsp4HI GCNGC 4 cut(s) 383, 672, 729, 890
FspBI CTAG 2 cut(s) 129, 1008
GluI GCNGC 4 cut(s) 383, 672, 729, 890
GsuI CTGGAG 1 cut(s) 216
HaeIII GGCC 4 cut(s) 35, 344, 711, 898
HgaI GACGC 1 cut(s) 28
Hin1II CATG 7 cut(s) 82, 343, 380, 791, 810, 904, 910
HinfI GANTC 2 cut(s) 514, 943
HphI GGTGA 5 cut(s) 55, 138, 415, 512, 975
Hpy166II GTNNAC 2 cut(s) 275, 776
Hpy188I TCNGA 4 cut(s) 18, 88, 298, 316
Hpy188III TCNNGA 8 cut(s) 210, 233, 304, 395, 589, 635, 788, 814
Hpy8I GTNNAC 2 cut(s) 275, 776
HpyAV CCTTC 4 cut(s) 25, 45, 497, 731
HpyCH4III ACNGT 4 cut(s) 244, 469, 522, 850
HpyCH4V TGCA 9 cut(s) 275, 617, 674, 731, 798, 846, 862, 892, 963
HpyF10VI GCNNNNNNNGC 4 cut(s) 236, 562, 571, 895
HpyF3I CTNAG 3 cut(s) 454, 478, 569
Hsp92II CATG 7 cut(s) 82, 343, 380, 791, 810, 904, 910
Ksp22I TGATCA 2 cut(s) 715, 745
Kzo9I GATC 5 cut(s) 133, 222, 528, 715, 745
LmnI GCTCC 2 cut(s) 105, 235
Lsp1109I GCAGC 4 cut(s) 394, 658, 715, 876
LweI GCATC 3 cut(s) 226, 833, 878
MaeI CTAG 2 cut(s) 129, 1008
MaeIII GTNAC 5 cut(s) 194, 286, 421, 463, 511
MalI GATC 5 cut(s) 135, 224, 530, 717, 747
MbiI CCGCTC 1 cut(s) 108
MboI GATC 5 cut(s) 133, 222, 528, 715, 745
MboII GAAGA 2 cut(s) 746, 803
MflI RGATCY 1 cut(s) 133
MhlI GDGCHC 1 cut(s) 277
MlsI TGGCCA 1 cut(s) 344
MluCI AATT 4 cut(s) 183, 279, 360, 857
MluNI TGGCCA 1 cut(s) 344
MlyI GAGTC 1 cut(s) 508
MmeI TCCRAC 1 cut(s) 496
MnlI CCTC 8 cut(s) 71, 84, 94, 161, 429, 530, 700, 879
Mox20I TGGCCA 1 cut(s) 344
MscI TGGCCA 1 cut(s) 344
MseI TTAA 2 cut(s) 249, 957
MslI CAYNNNNRTG 3 cut(s) 723, 851, 905
Msp20I TGGCCA 1 cut(s) 344
MspA1I CMGCKG 1 cut(s) 385
MspR9I CCNGG 3 cut(s) 26, 372, 432
MvaI CCWGG 3 cut(s) 26, 372, 432
MwoI GCNNNNNNNGC 4 cut(s) 236, 562, 571, 895
NcoI CCATGG 1 cut(s) 806
NdeI CATATG 2 cut(s) 753, 780
NdeII GATC 5 cut(s) 133, 222, 528, 715, 745
NheI GCTAGC 1 cut(s) 1007
NlaIII CATG 7 cut(s) 82, 343, 380, 791, 810, 904, 910
NmuCI GTSAC 3 cut(s) 421, 463, 511
NspI RCATGY 1 cut(s) 82
OliI CACNNNNGTG 1 cut(s) 851
PaeR7I CTCGAG 1 cut(s) 812
PagI TCATGA 1 cut(s) 787
PasI CCCWGGG 1 cut(s) 431
PceI AGGCCT 1 cut(s) 35
PfeI GAWTC 1 cut(s) 943
PkrI GCNGC 4 cut(s) 384, 673, 730, 891
PleI GAGTC 1 cut(s) 508
PpsI GAGTC 1 cut(s) 508
Psp6I CCWGG 3 cut(s) 24, 370, 430
PspGI CCWGG 3 cut(s) 24, 370, 430
PspPI GGNCC 2 cut(s) 709, 897
PstI CTGCAG 3 cut(s) 676, 733, 965
PsuI RGATCY 1 cut(s) 133
PvuII CAGCTG 1 cut(s) 385
RsaI GTAC 1 cut(s) 610
RsaNI GTAC 1 cut(s) 609
RseI CAYNNNNRTG 3 cut(s) 723, 851, 905
SaqAI TTAA 2 cut(s) 249, 957
SatI GCNGC 4 cut(s) 383, 672, 729, 890
Sau3AI GATC 5 cut(s) 133, 222, 528, 715, 745
Sau96I GGNCC 2 cut(s) 709, 897
SchI GAGTC 1 cut(s) 508
ScrFI CCNGG 3 cut(s) 26, 372, 432
SduI GDGCHC 1 cut(s) 277
SetI ASST 8 cut(s) 221, 264, 271, 387, 673, 763, 830, 968
SfaNI GCATC 3 cut(s) 226, 833, 878
SfcI CTRYAG 3 cut(s) 672, 729, 961
Sfr274I CTCGAG 1 cut(s) 812
SlaI CTCGAG 1 cut(s) 812
SmiMI CAYNNNNRTG 3 cut(s) 723, 851, 905
SmlI CTYRAG 1 cut(s) 812
SmoI CTYRAG 1 cut(s) 812
Sse9I AATT 4 cut(s) 183, 279, 360, 857
SseBI AGGCCT 1 cut(s) 35
SsiI CCGC 2 cut(s) 108, 917
SspI AATATT 1 cut(s) 405
SspMI CTAG 2 cut(s) 129, 1008
StuI AGGCCT 1 cut(s) 35
StyD4I CCNGG 3 cut(s) 24, 370, 430
StyI CCWWGG 2 cut(s) 603, 806
TaaI ACNGT 4 cut(s) 244, 469, 522, 850
TaqI TCGA 1 cut(s) 813
TasI AATT 4 cut(s) 183, 279, 360, 857
TfiI GAWTC 1 cut(s) 943
Tru1I TTAA 2 cut(s) 249, 957
Tru9I TTAA 2 cut(s) 249, 957
TscAI CASTG 3 cut(s) 247, 945, 1009
TseFI GTSAC 3 cut(s) 421, 463, 511
TseI GCWGC 4 cut(s) 382, 671, 728, 889
Tsp45I GTSAC 3 cut(s) 421, 463, 511
TspDTI ATGAA 2 cut(s) 804, 989
TspGWI ACGGA 2 cut(s) 188, 619
TspRI CASTG 3 cut(s) 247, 945, 1009
VneI GTGCAC 1 cut(s) 273
XagI CCTNNNNNAGG 1 cut(s) 88
XceI RCATGY 1 cut(s) 82
XhoI CTCGAG 1 cut(s) 812
XspI CTAG 2 cut(s) 129, 1008
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.