FvH4_5g04821

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000056
Physical Location & Seq
Reverse (-)
2871669 .. 2874024
2356 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g04821.t1

Sequence Viewer

Length: 945 bp
ATGTCCTCCGAGAGGCATTATTTTTGGAGCGGTGTGACACATACATATCCTAGAGATCCAAGATTATCACCACCCAAGTATAAAATCCCAAGAGGCGCGGACACAAAAATTGGATTGCGTTACTACAAGATATCTGGACGAAGCTGGATTAATGCTCCAGATGCCACCGTTTTTAATGTTCCAAAGCTCGTAGCTCGTAAACTAGTTTCAGTTAATCTCTCTGATGTCAAGGAATCACCCGAAAGGAGAAATTATATCGATTTTATGGCCAAGCAACTATCGGGAATTGGTGTCCCAGGATGTGAGCAGCTGGATGTTCTTGAAAAAATATTTGATGTGATTGATGTCACCGTCCCCGGGAGGCATATTATTGTGTTCTTAGCAGATGTGACCGTCCAACTCTTAGACAATGCGAGTAATCTTGGTGAAGGGGATGTGACTTTACCGTTATGGATCAATGGAAGACTTACTGATAATCAGCAAATTATGCTTCAAAGGCTTATGATGGATTTCAGCTGTGGTGTCCCCAAGGGTTCTCCTGCAACTTTATCATCCATTCAGGACTTGGAGAAAGTGAGACTTGATAGTTTGGAAGCTGCTGTTAGACAAATGGATTGTGCTATTTGTATTGATCACTTTTATGCTGCAGAAGAAGGGAATGATCATCATCATATGATTGTTCGCTTGCCCTGTTCACATATGTATCATGAAGATTGCATTGGCCAGTGGCTCGAGAATAATCAAAGGTGTCCGTTGTGCCGATGCACAGTTGTGTTGCACAGGGCATCAAAACCCCTAATGAGGCTGCATTGGCCCATGCTCATGTTGTCTGCGGTTGGTTTGCTAACTGCTACACTGATTCCCAGATTGTTTAACTGCAGGTCAAGGATGAAAATATTACCAAATCGTGTGTCACTCAGTGCTAGCCGTGTATTTGGCTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

315

Amino Acids

35.62

Weight (kDa)

8.79

Isoelectric Point (pI)

39.82

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 205 - 254 5.4e-12 Ring finger domain
zf-rbx1 PF12678 205 - 254 2.1e-09 RING-H2 zinc finger domain
zf-C3HC4_2 PF13923 206 - 253 1.7e-07 Zinc finger, C3HC4 type (RING finger)
zf-C3HC4 PF00097 206 - 253 8.8e-07 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 870
AccBSI CCGCTC 1 cut(s) 30
AccII CGCG 1 cut(s) 98
AciI CCGC 3 cut(s) 30, 98, 833
AclWI GGATC 2 cut(s) 50, 461
AcoI YGGCCR 2 cut(s) 267, 721
AdeI CACNNNGTG 1 cut(s) 920
AfiI CCNNNNNNNGG 3 cut(s) 12, 357, 801
AgsI TTSAA 2 cut(s) 323, 494
AhlI ACTAGT 1 cut(s) 202
AjnI CCWGG 1 cut(s) 295
AjuI GAANNNNNNNTTGG 2 cut(s) 702, 734
AleI CACNNNNGTG 1 cut(s) 770
AluBI AGCT 6 cut(s) 144, 187, 194, 310, 516, 596
AluI AGCT 6 cut(s) 144, 187, 194, 310, 516, 596
Alw26I GTCTC 1 cut(s) 571
AlwI GGATC 2 cut(s) 50, 461
Ama87I CYCGRG 2 cut(s) 356, 731
AoxI GGCC 3 cut(s) 267, 721, 812
ApeKI GCWGC 4 cut(s) 307, 596, 644, 805
ArsI GACNNNNNNTTYG 2 cut(s) 896, 928
AseI ATTAAT 1 cut(s) 150
AspLEI GCGC 1 cut(s) 98
AspS9I GGNCC 1 cut(s) 813
AsuC2I CCSGG 2 cut(s) 357, 358
AsuHPI GGTGA 4 cut(s) 60, 228, 340, 437
AsuNHI GCTAGC 1 cut(s) 923
AvaI CYCGRG 2 cut(s) 356, 731
BaeI ACNNNNGTAYC 2 cut(s) 686, 719
BalI TGGCCA 2 cut(s) 269, 723
BbsI GAAGAC 1 cut(s) 469
BbvI GCAGC 4 cut(s) 319, 583, 631, 792
BccI CCATC 1 cut(s) 499
BceAI ACGGC 1 cut(s) 912
BciT130I CCWGG 1 cut(s) 297
BclI TGATCA 2 cut(s) 631, 661
BcnI CCSGG 2 cut(s) 357, 358
BcoDI GTCTC 1 cut(s) 571
BcuI ACTAGT 1 cut(s) 202
BfaI CTAG 3 cut(s) 51, 203, 924
BfmI CTRYAG 2 cut(s) 645, 877
BfuAI ACCTGC 1 cut(s) 870
BisI GCNGC 4 cut(s) 308, 597, 645, 806
BlsI GCNGC 4 cut(s) 309, 598, 646, 807
Bme1390I CCNGG 3 cut(s) 297, 357, 358
BmeT110I CYCGRG 2 cut(s) 356, 731
BmgT120I GGNCC 1 cut(s) 813
BmrFI CCNGG 3 cut(s) 297, 357, 358
BmsI GCATC 3 cut(s) 151, 752, 794
BmtI GCTAGC 1 cut(s) 927
BpiI GAAGAC 1 cut(s) 469
BpmI CTGGAG 1 cut(s) 141
BpuMI CCSGG 2 cut(s) 357, 358
Bsa29I ATCGAT 1 cut(s) 258
BsaBI GATNNNNATC 1 cut(s) 666
BsaJI CCNNGG 4 cut(s) 295, 355, 356, 528
Bsc4I CCNNNNNNNGG 3 cut(s) 12, 357, 801
Bse1I ACTGG 1 cut(s) 724
Bse8I GATNNNNATC 1 cut(s) 666
BseBI CCWGG 1 cut(s) 297
BseCI ATCGAT 1 cut(s) 258
BseDI CCNNGG 4 cut(s) 295, 355, 356, 528
BseGI GGATG 5 cut(s) 305, 319, 439, 551, 894
BseJI GATNNNNATC 1 cut(s) 666
BseLI CCNNNNNNNGG 3 cut(s) 12, 357, 801
BseMII CTCAG 1 cut(s) 931
BseNI ACTGG 1 cut(s) 724
BseXI GCAGC 4 cut(s) 319, 583, 631, 792
Bsh1236I CGCG 1 cut(s) 98
BshFI GGCC 3 cut(s) 269, 723, 814
BshVI ATCGAT 1 cut(s) 258
BsiHKCI CYCGRG 2 cut(s) 356, 731
BsiSI CCGG 1 cut(s) 357
BslFI GGGAC 3 cut(s) 278, 338, 509
BslI CCNNNNNNNGG 3 cut(s) 12, 357, 801
BsmAI GTCTC 1 cut(s) 571
BsmFI GGGAC 3 cut(s) 278, 338, 509
BsnI GGCC 3 cut(s) 269, 723, 814
BsoBI CYCGRG 2 cut(s) 356, 731
Bsp143I GATC 4 cut(s) 55, 453, 631, 661
BspACI CCGC 3 cut(s) 30, 98, 833
BspANI GGCC 3 cut(s) 269, 723, 814
BspCNI CTCAG 1 cut(s) 930
BspDI ATCGAT 1 cut(s) 258
BspFNI CGCG 1 cut(s) 98
BspHI TCATGA 1 cut(s) 706
BspMAI CTGCAG 2 cut(s) 649, 881
BspMI ACCTGC 1 cut(s) 870
BspOI GCTAGC 1 cut(s) 927
BspPI GGATC 2 cut(s) 50, 461
BsrBI CCGCTC 1 cut(s) 30
BsrI ACTGG 1 cut(s) 724
BssECI CCNNGG 4 cut(s) 295, 355, 356, 528
BssMI GATC 4 cut(s) 55, 453, 631, 661
BssT1I CCWWGG 1 cut(s) 528
Bst2UI CCWGG 1 cut(s) 297
Bst4CI ACNGT 5 cut(s) 169, 352, 394, 447, 769
BstAPI GCANNNNNTGC 1 cut(s) 487
BstC8I GCNNGC 2 cut(s) 686, 925
BstDEI CTNAG 3 cut(s) 379, 403, 917
BstENI CCTNNNNNAGG 1 cut(s) 10
BstF5I GGATG 5 cut(s) 305, 319, 439, 551, 894
BstFNI CGCG 1 cut(s) 98
BstHHI GCGC 1 cut(s) 98
BstKTI GATC 4 cut(s) 58, 456, 634, 664
BstMAI GTCTC 1 cut(s) 571
BstMBI GATC 4 cut(s) 55, 453, 631, 661
BstMWI GCNNNNNNNGC 4 cut(s) 161, 487, 496, 811
BstNI CCWGG 1 cut(s) 297
BstSCI CCNGG 3 cut(s) 295, 355, 356
BstSFI CTRYAG 2 cut(s) 645, 877
BstUI CGCG 1 cut(s) 98
BstV1I GCAGC 4 cut(s) 319, 583, 631, 792
BstV2I GAAGAC 1 cut(s) 469
BstX2I RGATCY 1 cut(s) 55
BstYI RGATCY 1 cut(s) 55
Bsu15I ATCGAT 1 cut(s) 258
BsuRI GGCC 3 cut(s) 269, 723, 814
BsuTUI ATCGAT 1 cut(s) 258
BtsCI GGATG 5 cut(s) 305, 319, 439, 551, 894
BtsIMutI CAGTG 3 cut(s) 731, 854, 925
BveI ACCTGC 1 cut(s) 870
Cac8I GCNNGC 2 cut(s) 686, 925
CciI TCATGA 1 cut(s) 706
CfoI GCGC 1 cut(s) 98
Cfr13I GGNCC 1 cut(s) 813
Cfr9I CCCGGG 1 cut(s) 356
ClaI ATCGAT 1 cut(s) 258
CviAII CATG 3 cut(s) 707, 817, 823
DdeI CTNAG 3 cut(s) 379, 403, 917
DpnI GATC 4 cut(s) 57, 455, 633, 663
DpnII GATC 4 cut(s) 55, 453, 631, 661
DraIII CACNNNGTG 1 cut(s) 920
EaeI YGGCCR 2 cut(s) 267, 721
Eco130I CCWWGG 1 cut(s) 528
Eco32I GATATC 1 cut(s) 132
Eco88I CYCGRG 2 cut(s) 356, 731
EcoNI CCTNNNNNAGG 1 cut(s) 10
EcoRII CCWGG 1 cut(s) 295
EcoRV GATATC 1 cut(s) 132
EcoT14I CCWWGG 1 cut(s) 528
ErhI CCWWGG 1 cut(s) 528
FaeI CATG 3 cut(s) 710, 820, 826
FalI AAGNNNNNCTT 2 cut(s) 564, 596
FaqI GGGAC 3 cut(s) 278, 338, 509
FatI CATG 3 cut(s) 706, 816, 822
FauNDI CATATG 2 cut(s) 672, 699
FbaI TGATCA 2 cut(s) 631, 661
Fnu4HI GCNGC 4 cut(s) 308, 597, 645, 806
FokI GGATG 5 cut(s) 312, 326, 446, 538, 901
Fsp4HI GCNGC 4 cut(s) 308, 597, 645, 806
FspBI CTAG 3 cut(s) 51, 203, 924
GlaI GCGC 1 cut(s) 97
GluI GCNGC 4 cut(s) 308, 597, 645, 806
GsuI CTGGAG 1 cut(s) 141
HaeIII GGCC 3 cut(s) 269, 723, 814
HapII CCGG 1 cut(s) 357
HhaI GCGC 1 cut(s) 98
Hin1II CATG 3 cut(s) 710, 820, 826
Hin6I GCGC 1 cut(s) 96
HinP1I GCGC 1 cut(s) 96
HinfI GANTC 2 cut(s) 233, 859
HpaII CCGG 1 cut(s) 357
HphI GGTGA 4 cut(s) 60, 228, 340, 437
Hpy166II GTNNAC 2 cut(s) 200, 695
Hpy188I TCNGA 2 cut(s) 10, 223
Hpy188III TCNNGA 7 cut(s) 135, 158, 282, 320, 560, 707, 733
Hpy8I GTNNAC 2 cut(s) 200, 695
HpyAV CCTTC 2 cut(s) 422, 647
HpyCH4III ACNGT 5 cut(s) 169, 352, 394, 447, 769
HpyCH4V TGCA 7 cut(s) 542, 647, 717, 765, 778, 808, 879
HpyF10VI GCNNNNNNNGC 4 cut(s) 161, 487, 496, 811
HpyF3I CTNAG 3 cut(s) 379, 403, 917
Hsp92II CATG 3 cut(s) 710, 820, 826
HspAI GCGC 1 cut(s) 96
Ksp22I TGATCA 2 cut(s) 631, 661
Kzo9I GATC 4 cut(s) 55, 453, 631, 661
LmnI GCTCC 2 cut(s) 27, 160
Lsp1109I GCAGC 4 cut(s) 319, 583, 631, 792
LweI GCATC 3 cut(s) 151, 752, 794
MaeI CTAG 3 cut(s) 51, 203, 924
MaeIII GTNAC 6 cut(s) 34, 119, 346, 388, 436, 912
MalI GATC 4 cut(s) 57, 455, 633, 663
MbiI CCGCTC 1 cut(s) 30
MboI GATC 4 cut(s) 55, 453, 631, 661
MboII GAAGA 3 cut(s) 474, 662, 722
MflI RGATCY 1 cut(s) 55
MlsI TGGCCA 2 cut(s) 269, 723
MluCI AATT 4 cut(s) 108, 250, 285, 483
MluNI TGGCCA 2 cut(s) 269, 723
MmeI TCCRAC 1 cut(s) 421
MnlI CCTC 5 cut(s) 6, 16, 86, 354, 795
Mox20I TGGCCA 2 cut(s) 269, 723
MscI TGGCCA 2 cut(s) 269, 723
MseI TTAA 4 cut(s) 150, 174, 213, 873
MslI CAYNNNNRTG 3 cut(s) 639, 770, 821
Msp20I TGGCCA 2 cut(s) 269, 723
MspA1I CMGCKG 2 cut(s) 310, 516
MspI CCGG 1 cut(s) 357
MspR9I CCNGG 3 cut(s) 297, 357, 358
MvaI CCWGG 1 cut(s) 297
MvnI CGCG 1 cut(s) 98
MwoI GCNNNNNNNGC 4 cut(s) 161, 487, 496, 811
NciI CCSGG 2 cut(s) 357, 358
NdeI CATATG 2 cut(s) 672, 699
NdeII GATC 4 cut(s) 55, 453, 631, 661
NheI GCTAGC 1 cut(s) 923
NlaIII CATG 3 cut(s) 710, 820, 826
NmuCI GTSAC 5 cut(s) 34, 346, 388, 436, 912
OliI CACNNNNGTG 1 cut(s) 770
PaeR7I CTCGAG 1 cut(s) 731
PagI TCATGA 1 cut(s) 706
PfeI GAWTC 2 cut(s) 233, 859
PkrI GCNGC 4 cut(s) 309, 598, 646, 807
PshBI ATTAAT 1 cut(s) 150
Psp6I CCWGG 1 cut(s) 295
PspGI CCWGG 1 cut(s) 295
PspPI GGNCC 1 cut(s) 813
PstI CTGCAG 2 cut(s) 649, 881
PsuI RGATCY 1 cut(s) 55
PvuII CAGCTG 2 cut(s) 310, 516
RseI CAYNNNNRTG 3 cut(s) 639, 770, 821
SaqAI TTAA 4 cut(s) 150, 174, 213, 873
SatI GCNGC 4 cut(s) 308, 597, 645, 806
Sau3AI GATC 4 cut(s) 55, 453, 631, 661
Sau96I GGNCC 1 cut(s) 813
ScrFI CCNGG 3 cut(s) 297, 357, 358
SetI ASST 8 cut(s) 146, 189, 196, 312, 518, 598, 749, 884
SfaNI GCATC 3 cut(s) 151, 752, 794
SfcI CTRYAG 2 cut(s) 645, 877
Sfr274I CTCGAG 1 cut(s) 731
SlaI CTCGAG 1 cut(s) 731
SmaI CCCGGG 1 cut(s) 358
SmiMI CAYNNNNRTG 3 cut(s) 639, 770, 821
SmlI CTYRAG 1 cut(s) 731
SmoI CTYRAG 1 cut(s) 731
SpeI ACTAGT 1 cut(s) 202
Sse9I AATT 4 cut(s) 108, 250, 285, 483
SsiI CCGC 3 cut(s) 30, 98, 833
SspI AATATT 2 cut(s) 330, 897
SspMI CTAG 3 cut(s) 51, 203, 924
StyD4I CCNGG 3 cut(s) 295, 355, 356
StyI CCWWGG 1 cut(s) 528
TaaI ACNGT 5 cut(s) 169, 352, 394, 447, 769
TaqI TCGA 2 cut(s) 258, 732
TasI AATT 4 cut(s) 108, 250, 285, 483
TfiI GAWTC 2 cut(s) 233, 859
Tru1I TTAA 4 cut(s) 150, 174, 213, 873
Tru9I TTAA 4 cut(s) 150, 174, 213, 873
TscAI CASTG 3 cut(s) 731, 861, 925
TseFI GTSAC 5 cut(s) 34, 346, 388, 436, 912
TseI GCWGC 4 cut(s) 307, 596, 644, 805
Tsp45I GTSAC 5 cut(s) 34, 346, 388, 436, 912
TspDTI ATGAA 2 cut(s) 723, 905
TspGWI ACGGA 1 cut(s) 741
TspMI CCCGGG 1 cut(s) 356
TspRI CASTG 3 cut(s) 731, 861, 925
VspI ATTAAT 1 cut(s) 150
XagI CCTNNNNNAGG 1 cut(s) 10
XcmI CCANNNNNNNNNTGG 1 cut(s) 562
XhoI CTCGAG 1 cut(s) 731
XmaI CCCGGG 1 cut(s) 356
XspI CTAG 3 cut(s) 51, 203, 924
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.