Rorug02G0271500

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0000056
Physical Location & Seq
Reverse (-)
28849398 .. 28851872
2475 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0271500.1

Sequence Viewer

Length: 1512 bp
ATGGAAGATATCTTCTTGTACACATCTCTCTCAATCATCGTGTGCCTCCTCATCACTCTAAAGCTGTTTGGACGGCGTTGTTACCCCAACCTCCCTCCAAGCCCTTCCTTTCCTCTTCCTATTCTCGGCCACCTCCACCTTCTCAAACCCCCGGTCTACCGCACCTTCCACCGCCTCGCTCAGAAACACGGCCCCATCTTCTCCCTCTGGTTCGGCTCCCGCCGCGTGGTCATTATCTCCTCCACCTCGGCCGTGCAAGAATGCTTCACCAAAAACGACATCGTGTTGGCGAACCGTCCTCCTTCACTCTTGGGCAAGCACTTTGCGTACAACAACACCACCATGTCCTCCTCACCCTACGGCGACCACTGGCGCAACGTTCGCCGTATCGGCACCGTCGAGGTCTTGTCCACTGGCCGGCTCAACTCGTTCTCTGATGTCCGAAAAGACGAAGTCAAGCATTTGCTGCGCAAGCTCTCTCATAACGCAGGGGAAGAAGGTGGTTTTGTGAAAGTGGAGCTGAGGTCTATGTTCTATGAGCTGACCTTCAACAACATAATGACAATGGTAGCAGGGAAGAGGTTCGCCGGGGACCATGTTTTGAACAAAGAAAAGGGGAAGGAGTTCATTGAGATCATGAACGAGACTCTCTCGTTAGGTGGGGGAACCAATCCCGGAGAATTCATGCCCTTTCTCAATTGGTTTGGCGGTAGTGGTTTTGAAGAGAAGGTGAAGAAGTTGGCCAAAAGAGCAGATGCGTTCTTTCAACATCTGATTGATGAACACAGGAACAAAAGTGCTTCGGAGAGTAAAATTACCATGATCGACCATTTGCTTTCCCAGCAGGAGTCACAGCCTCAATACTACACCGATGACATTATCAAAGGACTAATACAGGTTTTATTACTGGCGGGCACAGATACATCTGCAGTAACATTAGAATGGGCCATGTCCAATTTGCTAAACCATCCAAATGTGTTAAAGAAGGCTAGAGCCGAATTGGATGCTCAAATTGGTCAAGAACGCTTAGTAGACGAATCAGACCTCTCCAATCTTCAGTACCTACAAAGTATCATTTCTGAGACTCTTCGGTTGTACCCAGCAGCACCGATGCTAGTACCACATTTTGCATCTGATGATTGTGTTGTTAGCGGATTCAATATACCACGTAACACAACGGTATTGGTCAATGCTTGGGCCATACATAGAGACCCGAAGTTGTGGGATGATCCTGAAAGCTTCAAACCCGAGAGGTTTGAAATCGGCAAAAACGACGAGGCACATAAACTTATGCCGTTTGGAATGGGAAGAAGGGCATGTCCTGGAGCAGGCTTGGCCCGACGTGAGGTGGGACTGACTTTGGCTTCATTAATTCAATGCTTTGAGTGGGGGAGGGTCAGTGATAAGAAGGTTGATATGACTGAATTAGGAAAGGGAGCCACCATGCATAAACTTCAACCATTGGAGGTCATGTGCAAACCACGCTCATTTATGAAAAATGTTGTTCATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

503

Amino Acids

56.81

Weight (kDa)

8.88

Isoelectric Point (pI)

44.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 32 - 483 4.3e-103 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 470
AccB1I GGYRCC 1 cut(s) 392
AccI GTMKAC 2 cut(s) 156, 1032
AccII CGCG 1 cut(s) 225
AciI CCGC 7 cut(s) 160, 172, 220, 223, 708, 911, 1152
AclI AACGTT 1 cut(s) 378
AclWI GGATC 1 cut(s) 1223
AcoI YGGCCR 4 cut(s) 127, 249, 415, 741
AcsI RAATTY 1 cut(s) 680
AcuI CTGAAG 1 cut(s) 1040
AfaI GTAC 5 cut(s) 20, 329, 1061, 1097, 1119
AfiI CCNNNNNNNGG 5 cut(s) 125, 226, 417, 1328, 1345
AgsI TTSAA 9 cut(s) 550, 604, 722, 767, 1159, 1243, 1259, 1376, 1457
AjiI CACGTC 1 cut(s) 1343
AjnI CCWGG 1 cut(s) 1321
AluBI AGCT 5 cut(s) 64, 475, 520, 541, 1239
AluI AGCT 5 cut(s) 64, 475, 520, 541, 1239
Alw26I GTCTC 3 cut(s) 638, 1076, 1203
AlwI GGATC 1 cut(s) 1223
Ama87I CYCGRG 1 cut(s) 1247
AoxI GGCC 8 cut(s) 127, 190, 249, 415, 741, 945, 1197, 1335
ApeKI GCWGC 2 cut(s) 466, 1103
ApoI RAATTY 1 cut(s) 680
ArsI GACNNNNNNTTYG 2 cut(s) 138, 170
AseI ATTAAT 1 cut(s) 1370
Asp700I GAANNNNTTC 2 cut(s) 581, 623
AspLEI GCGC 2 cut(s) 375, 471
AspS9I GGNCC 5 cut(s) 191, 592, 945, 1197, 1336
AsuC2I CCSGG 3 cut(s) 152, 589, 675
AsuHPI GGTGA 3 cut(s) 259, 345, 742
AvaI CYCGRG 1 cut(s) 1247
AvaII GGWCC 1 cut(s) 592
BaeGI GKGCMC 1 cut(s) 917
BalI TGGCCA 1 cut(s) 743
BanI GGYRCC 1 cut(s) 392
BbvCI CCTCAGC 1 cut(s) 521
BbvI GCAGC 2 cut(s) 453, 1115
BccI CCATC 2 cut(s) 203, 975
BceAI ACGGC 6 cut(s) 89, 205, 236, 369, 376, 1279
BcgI CGANNNNNNTGC 2 cut(s) 986, 1020
BciT130I CCWGG 1 cut(s) 1323
BcnI CCSGG 3 cut(s) 152, 589, 675
BcoDI GTCTC 3 cut(s) 638, 1076, 1203
BfaI CTAG 2 cut(s) 990, 1115
BfmI CTRYAG 1 cut(s) 927
BglI GCCNNNNNGGC 1 cut(s) 390
BisI GCNGC 3 cut(s) 223, 467, 1104
BlsI GCNGC 3 cut(s) 224, 468, 1105
Bme1390I CCNGG 4 cut(s) 152, 589, 675, 1323
Bme18I GGWCC 1 cut(s) 592
BmeT110I CYCGRG 1 cut(s) 1247
BmgBI CACGTC 1 cut(s) 1343
BmgT120I GGNCC 5 cut(s) 191, 592, 945, 1197, 1336
BmiI GGNNCC 6 cut(s) 193, 217, 394, 593, 667, 1438
BmrFI CCNGG 4 cut(s) 152, 589, 675, 1323
BmsI GCATC 4 cut(s) 745, 994, 1101, 1139
BplI GAGNNNNNCTC 2 cut(s) 635, 667
BpmI CTGGAG 1 cut(s) 1344
Bpu10I CCTNAGC 1 cut(s) 521
BpuMI CCSGG 3 cut(s) 152, 589, 675
BsaAI YACGTR 1 cut(s) 1169
BsaI GGTCTC 1 cut(s) 1203
BsaJI CCNNGG 3 cut(s) 150, 246, 588
BsaXI ACNNNNNCTCC 6 cut(s) 509, 539, 1384, 1414, 1457, 1487
Bsc4I CCNNNNNNNGG 5 cut(s) 125, 226, 417, 1328, 1345
Bse118I RCCGGY 1 cut(s) 417
Bse1I ACTGG 3 cut(s) 374, 418, 912
BseBI CCWGG 1 cut(s) 1323
BseDI CCNNGG 3 cut(s) 150, 246, 588
BseGI GGATG 3 cut(s) 967, 1009, 1231
BseLI CCNNNNNNNGG 5 cut(s) 125, 226, 417, 1328, 1345
BseMII CTCAG 3 cut(s) 194, 512, 1071
BseNI ACTGG 3 cut(s) 374, 418, 912
BseRI GAGGAG 3 cut(s) 38, 229, 340
BseSI GKGCMC 1 cut(s) 917
BseX3I CGGCCG 1 cut(s) 249
BseXI GCAGC 2 cut(s) 453, 1115
BseYI CCCAGC 2 cut(s) 840, 1099
Bsh1236I CGCG 1 cut(s) 225
Bsh1285I CGRYCG 1 cut(s) 252
BshFI GGCC 8 cut(s) 129, 192, 251, 417, 743, 947, 1199, 1337
BshNI GGYRCC 1 cut(s) 392
BsiEI CGRYCG 1 cut(s) 252
BsiHKCI CYCGRG 1 cut(s) 1247
BsiSI CCGG 4 cut(s) 152, 418, 588, 675
BslFI GGGAC 2 cut(s) 605, 1365
BslI CCNNNNNNNGG 5 cut(s) 125, 226, 417, 1328, 1345
BsmAI GTCTC 3 cut(s) 638, 1076, 1203
BsmFI GGGAC 2 cut(s) 605, 1365
BsmI GAATGC 1 cut(s) 266
BsnI GGCC 8 cut(s) 129, 192, 251, 417, 743, 947, 1199, 1337
Bso31I GGTCTC 1 cut(s) 1203
BsoBI CYCGRG 1 cut(s) 1247
Bsp1286I GDGCHC 1 cut(s) 917
Bsp1407I TGTACA 1 cut(s) 18
Bsp143I GATC 3 cut(s) 633, 822, 1228
BspACI CCGC 7 cut(s) 160, 172, 220, 223, 708, 911, 1152
BspANI GGCC 8 cut(s) 129, 192, 251, 417, 743, 947, 1199, 1337
BspCNI CTCAG 3 cut(s) 193, 513, 1072
BspFNI CGCG 1 cut(s) 225
BspHI TCATGA 1 cut(s) 636
BspLI GGNNCC 6 cut(s) 193, 217, 394, 593, 667, 1438
BspMAI CTGCAG 1 cut(s) 931
BspPI GGATC 1 cut(s) 1223
BspT107I GGYRCC 1 cut(s) 392
BspTNI GGTCTC 1 cut(s) 1203
BsrFI RCCGGY 1 cut(s) 417
BsrGI TGTACA 1 cut(s) 18
BsrI ACTGG 3 cut(s) 374, 418, 912
BssAI RCCGGY 1 cut(s) 417
BssECI CCNNGG 3 cut(s) 150, 246, 588
BssMI GATC 3 cut(s) 633, 822, 1228
Bst2UI CCWGG 1 cut(s) 1323
Bst4CI ACNGT 3 cut(s) 296, 397, 1180
Bst6I CTCTTC 4 cut(s) 120, 572, 717, 1092
BstAPI GCANNNNNTGC 1 cut(s) 466
BstAUI TGTACA 1 cut(s) 18
BstBAI YACGTR 1 cut(s) 1169
BstC8I GCNNGC 5 cut(s) 317, 419, 473, 913, 1330
BstDEI CTNAG 4 cut(s) 180, 521, 1027, 1080
BstENI CCTNNNNNAGG 1 cut(s) 1326
BstF5I GGATG 3 cut(s) 967, 1009, 1231
BstFNI CGCG 1 cut(s) 225
BstHHI GCGC 2 cut(s) 375, 471
BstKTI GATC 3 cut(s) 636, 825, 1231
BstMAI GTCTC 3 cut(s) 638, 1076, 1203
BstMBI GATC 3 cut(s) 633, 822, 1228
BstMCI CGRYCG 1 cut(s) 252
BstMWI GCNNNNNNNGC 9 cut(s) 222, 381, 390, 466, 472, 749, 841, 1334, 1482
BstNI CCWGG 1 cut(s) 1323
BstNSI RCATGY 1 cut(s) 1320
BstSCI CCNGG 4 cut(s) 150, 587, 673, 1321
BstSFI CTRYAG 1 cut(s) 927
BstSLI GKGCMC 1 cut(s) 917
BstUI CGCG 1 cut(s) 225
BstV1I GCAGC 2 cut(s) 453, 1115
BstZI CGGCCG 1 cut(s) 249
BsuRI GGCC 8 cut(s) 129, 192, 251, 417, 743, 947, 1199, 1337
BtrI CACGTC 1 cut(s) 1343
BtsCI GGATG 3 cut(s) 967, 1009, 1231
BtsIMutI CAGTG 3 cut(s) 367, 411, 1405
Cac8I GCNNGC 5 cut(s) 317, 419, 473, 913, 1330
CciI TCATGA 1 cut(s) 636
CfoI GCGC 2 cut(s) 375, 471
Cfr10I RCCGGY 1 cut(s) 417
Cfr13I GGNCC 5 cut(s) 191, 592, 945, 1197, 1336
Csp6I GTAC 5 cut(s) 19, 328, 1060, 1096, 1118
CviAII CATG 9 cut(s) 343, 596, 637, 685, 820, 949, 1317, 1444, 1471
CviQI GTAC 5 cut(s) 19, 328, 1060, 1096, 1118
DdeI CTNAG 4 cut(s) 180, 521, 1027, 1080
DpnI GATC 3 cut(s) 635, 824, 1230
DpnII GATC 3 cut(s) 633, 822, 1228
EaeI YGGCCR 4 cut(s) 127, 249, 415, 741
EagI CGGCCG 1 cut(s) 249
Eam1104I CTCTTC 4 cut(s) 120, 572, 717, 1092
EarI CTCTTC 4 cut(s) 120, 572, 717, 1092
EclXI CGGCCG 1 cut(s) 249
Eco31I GGTCTC 1 cut(s) 1203
Eco32I GATATC 1 cut(s) 10
Eco47I GGWCC 1 cut(s) 592
Eco52I CGGCCG 1 cut(s) 249
Eco57I CTGAAG 1 cut(s) 1040
Eco88I CYCGRG 1 cut(s) 1247
EcoNI CCTNNNNNAGG 1 cut(s) 1326
EcoRI GAATTC 1 cut(s) 680
EcoRII CCWGG 1 cut(s) 1321
EcoRV GATATC 1 cut(s) 10
EcoT22I ATGCAT 1 cut(s) 1449
FaeI CATG 9 cut(s) 346, 599, 640, 688, 823, 952, 1320, 1447, 1474
FaqI GGGAC 2 cut(s) 605, 1365
FatI CATG 9 cut(s) 342, 595, 636, 684, 819, 948, 1316, 1443, 1470
FauI CCCGC 2 cut(s) 227, 904
FblI GTMKAC 2 cut(s) 156, 1032
Fnu4HI GCNGC 3 cut(s) 223, 467, 1104
FokI GGATG 3 cut(s) 954, 1016, 1238
Fsp4HI GCNGC 3 cut(s) 223, 467, 1104
FspBI CTAG 2 cut(s) 990, 1115
FspI TGCGCA 1 cut(s) 470
GlaI GCGC 2 cut(s) 374, 470
GluI GCNGC 3 cut(s) 223, 467, 1104
GsaI CCCAGC 2 cut(s) 844, 1103
GsuI CTGGAG 1 cut(s) 1344
HaeIII GGCC 8 cut(s) 129, 192, 251, 417, 743, 947, 1199, 1337
HapII CCGG 4 cut(s) 152, 418, 588, 675
HhaI GCGC 2 cut(s) 375, 471
Hin1II CATG 9 cut(s) 346, 599, 640, 688, 823, 952, 1320, 1447, 1474
Hin6I GCGC 2 cut(s) 373, 469
HinP1I GCGC 2 cut(s) 373, 469
HindIII AAGCTT 1 cut(s) 1237
HinfI GANTC 5 cut(s) 646, 848, 1037, 1084, 1155
HpaII CCGG 4 cut(s) 152, 418, 588, 675
HphI GGTGA 3 cut(s) 259, 345, 742
Hpy166II GTNNAC 4 cut(s) 21, 157, 411, 1033
Hpy188I TCNGA 8 cut(s) 183, 436, 443, 774, 805, 1042, 1081, 1135
Hpy188III TCNNGA 3 cut(s) 637, 1019, 1232
Hpy8I GTNNAC 4 cut(s) 21, 157, 411, 1033
Hpy99I CGWCG 3 cut(s) 401, 1277, 1344
HpyCH4III ACNGT 3 cut(s) 296, 397, 1180
HpyCH4IV ACGT 3 cut(s) 378, 1168, 1342
HpyCH4V TGCA 5 cut(s) 256, 929, 1130, 1447, 1476
HpyF10VI GCNNNNNNNGC 9 cut(s) 222, 381, 390, 466, 472, 749, 841, 1334, 1482
HpyF3I CTNAG 4 cut(s) 180, 521, 1027, 1080
HpySE526I ACGT 3 cut(s) 378, 1168, 1342
Hsp92II CATG 9 cut(s) 346, 599, 640, 688, 823, 952, 1320, 1447, 1474
HspAI GCGC 2 cut(s) 373, 469
KroI GCCGGC 1 cut(s) 417
KroNI GCCGGC 1 cut(s) 419
Kzo9I GATC 3 cut(s) 633, 822, 1228
LmnI GCTCC 4 cut(s) 221, 517, 1325, 1436
Lsp1109I GCAGC 2 cut(s) 453, 1115
LweI GCATC 4 cut(s) 745, 994, 1101, 1139
MaeI CTAG 2 cut(s) 990, 1115
MaeII ACGT 3 cut(s) 378, 1168, 1342
MaeIII GTNAC 4 cut(s) 80, 849, 931, 1169
MalI GATC 3 cut(s) 635, 824, 1230
MboI GATC 3 cut(s) 633, 822, 1228
MfeI CAATTG 1 cut(s) 697
MhlI GDGCHC 1 cut(s) 917
MlsI TGGCCA 1 cut(s) 743
MluCI AATT 8 cut(s) 680, 697, 813, 955, 998, 1011, 1371, 1424
MluNI TGGCCA 1 cut(s) 743
MlyI GAGTC 3 cut(s) 640, 857, 1078
Mox20I TGGCCA 1 cut(s) 743
Mph1103I ATGCAT 1 cut(s) 1449
MroNI GCCGGC 1 cut(s) 417
MroXI GAANNNNTTC 2 cut(s) 581, 623
MscI TGGCCA 1 cut(s) 743
MseI TTAA 2 cut(s) 980, 1370
MslI CAYNNNNRTG 3 cut(s) 341, 940, 972
Msp20I TGGCCA 1 cut(s) 743
MspI CCGG 4 cut(s) 152, 418, 588, 675
MspR9I CCNGG 4 cut(s) 152, 589, 675, 1323
MunI CAATTG 1 cut(s) 697
Mva1269I GAATGC 1 cut(s) 266
MvaI CCWGG 1 cut(s) 1323
MvnI CGCG 1 cut(s) 225
MwoI GCNNNNNNNGC 9 cut(s) 222, 381, 390, 466, 472, 749, 841, 1334, 1482
NaeI GCCGGC 1 cut(s) 419
NciI CCSGG 3 cut(s) 152, 589, 675
NdeII GATC 3 cut(s) 633, 822, 1228
NgoMIV GCCGGC 1 cut(s) 417
NlaIII CATG 9 cut(s) 346, 599, 640, 688, 823, 952, 1320, 1447, 1474
NlaIV GGNNCC 6 cut(s) 193, 217, 394, 593, 667, 1438
NmeAIII GCCGAG 2 cut(s) 105, 227
NmuCI GTSAC 1 cut(s) 849
NsbI TGCGCA 1 cut(s) 470
NsiI ATGCAT 1 cut(s) 1449
NspI RCATGY 1 cut(s) 1320
PagI TCATGA 1 cut(s) 636
PcsI WCGNNNNNNNCGW 2 cut(s) 396, 1269
PctI GAATGC 1 cut(s) 266
PdiI GCCGGC 1 cut(s) 419
PdmI GAANNNNTTC 2 cut(s) 581, 623
PfeI GAWTC 2 cut(s) 1037, 1155
PflFI GACNNNGTC 1 cut(s) 452
PfoI TCCNGGA 2 cut(s) 673, 1321
PkrI GCNGC 3 cut(s) 224, 468, 1105
PleI GAGTC 3 cut(s) 640, 856, 1078
PpsI GAGTC 3 cut(s) 640, 856, 1078
Ppu21I YACGTR 1 cut(s) 1169
PshBI ATTAAT 1 cut(s) 1370
Psp1406I AACGTT 1 cut(s) 378
Psp6I CCWGG 1 cut(s) 1321
PspFI CCCAGC 2 cut(s) 840, 1099
PspGI CCWGG 1 cut(s) 1321
PspN4I GGNNCC 6 cut(s) 193, 217, 394, 593, 667, 1438
PspPI GGNCC 5 cut(s) 191, 592, 945, 1197, 1336
PstI CTGCAG 1 cut(s) 931
PsyI GACNNNGTC 1 cut(s) 452
RsaI GTAC 5 cut(s) 20, 329, 1061, 1097, 1119
RsaNI GTAC 5 cut(s) 19, 328, 1060, 1096, 1118
RseI CAYNNNNRTG 3 cut(s) 341, 940, 972
SaqAI TTAA 2 cut(s) 980, 1370
SatI GCNGC 3 cut(s) 223, 467, 1104
Sau3AI GATC 3 cut(s) 633, 822, 1228
Sau96I GGNCC 5 cut(s) 191, 592, 945, 1197, 1336
SchI GAGTC 3 cut(s) 640, 857, 1078
ScrFI CCNGG 4 cut(s) 152, 589, 675, 1323
SduI GDGCHC 1 cut(s) 917
SfaNI GCATC 4 cut(s) 745, 994, 1101, 1139
SfcI CTRYAG 1 cut(s) 927
SinI GGWCC 1 cut(s) 592
SmiMI CAYNNNNRTG 3 cut(s) 341, 940, 972
Sse9I AATT 8 cut(s) 680, 697, 813, 955, 998, 1011, 1371, 1424
SsiI CCGC 7 cut(s) 160, 172, 220, 223, 708, 911, 1152
SspMI CTAG 2 cut(s) 990, 1115
StyD4I CCNGG 4 cut(s) 150, 587, 673, 1321
TaaI ACNGT 3 cut(s) 296, 397, 1180
TaiI ACGT 3 cut(s) 381, 1171, 1345
TaqI TCGA 2 cut(s) 399, 825
TasI AATT 8 cut(s) 680, 697, 813, 955, 998, 1011, 1371, 1424
TatI WGTACW 1 cut(s) 18
TauI GCSGC 1 cut(s) 225
TfiI GAWTC 2 cut(s) 1037, 1155
Tru1I TTAA 2 cut(s) 980, 1370
Tru9I TTAA 2 cut(s) 980, 1370
TscAI CASTG 3 cut(s) 374, 418, 1405
TseFI GTSAC 1 cut(s) 849
TseI GCWGC 2 cut(s) 466, 1103
Tsp45I GTSAC 1 cut(s) 849
TspDTI ATGAA 7 cut(s) 616, 653, 673, 795, 1356, 1496, 1508
TspRI CASTG 3 cut(s) 374, 418, 1405
Tth111I GACNNNGTC 1 cut(s) 452
VpaK11BI GGWCC 1 cut(s) 592
VspI ATTAAT 1 cut(s) 1370
XagI CCTNNNNNAGG 1 cut(s) 1326
XapI RAATTY 1 cut(s) 680
XceI RCATGY 1 cut(s) 1320
XmiI GTMKAC 2 cut(s) 156, 1032
XmnI GAANNNNTTC 2 cut(s) 581, 623
XspI CTAG 2 cut(s) 990, 1115
Zsp2I ATGCAT 1 cut(s) 1449
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.