Rh2DG679000

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
OG0000056
Physical Location & Seq
Reverse (-)
89919896 .. 89923428
3533 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG679000.1

Sequence Viewer

Length: 792 bp
ATGGAGATGTACACGTTTATCGAGGCGCAGCAAGAGAGCGTACCCCACCCAGATAGAGGCGAGGTCGGCGACAATTATATTCTAGTCAAATTTACGTGCTACAAGTATATAGGCGGCCGCCCTAGCCCCGACTGCCCAATTCGTTGGGACTCACAAATTATTGAAGGCGAGAAACAGTATTGGGTCGACCTCCCAGGGATCAAGAATGTTACATCCCCCTACCGCAGCATCTGTACAAGATTAATCGCAGACTATCTTTCAACCACGAAAGCCCCAGAAGAAGAACATCCCTGTATAATTCACAAGTTATTCGAGGTGCTTGACGTGGCTGTCTCCCCTGACCTGCCAATTCACGTGGAGTTATTTGACGTGACTTTGCATCCATCATATCTTGTTCCCGCAACAAGGGAGTCCATTGAAGGCTTGGAAAGAGTGAGGCTTGATCGCTTGGGAGTATTGGAAGTTGGAGCAACATGTTCAATTTGTTGGCTGGGTTATGATGATGGCCAGGAACAACTGGATATGCTTTACGATTGGGCTTTGGCTTTTCAGGGACTGTTCAACCTGTATTGGTTTACACTGAACATAGCTGCCTTTTCTCCAAAGTCCACGCGTCTGCAAGACAGAGTTAAACAATGCATTACCTTTTTGAAAACGAAGCCGCGTTTACACTCTCATTTGTACCATTCTGCTGAAATGGAAGCTACACTGAGACTGAGGATGGAGAGCATGGACAAGCTAGCATTCAAAAAGAAGATGGAGGATGCAGTAATGGTGGTCAATGAAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

263

Amino Acids

30.36

Weight (kDa)

5.23

Isoelectric Point (pI)

49.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 329
Acc36I ACCTGC 1 cut(s) 351
AccI GTMKAC 1 cut(s) 186
AccII CGCG 2 cut(s) 613, 664
AciI CCGC 5 cut(s) 114, 118, 223, 399, 662
AclWI GGATC 1 cut(s) 206
AcoI YGGCCR 2 cut(s) 115, 505
AcsI RAATTY 1 cut(s) 89
AcvI CACGTG 1 cut(s) 355
AfaI GTAC 4 cut(s) 11, 42, 235, 683
AfiI CCNNNNNNNGG 2 cut(s) 56, 405
AflIII ACRYGT 3 cut(s) 12, 473, 611
AgsI TTSAA 7 cut(s) 164, 261, 419, 480, 562, 652, 748
AjiI CACGTC 2 cut(s) 325, 370
AjnI CCWGG 2 cut(s) 193, 507
AluBI AGCT 3 cut(s) 590, 704, 739
AluI AGCT 3 cut(s) 590, 704, 739
Alw26I GTCTC 2 cut(s) 337, 706
AlwI GGATC 1 cut(s) 206
AlwNI CAGNNNCTG 2 cut(s) 231, 556
AoxI GGCC 2 cut(s) 115, 505
ApeKI GCWGC 3 cut(s) 28, 225, 590
ApoI RAATTY 1 cut(s) 89
AseI ATTAAT 1 cut(s) 242
AspLEI GCGC 1 cut(s) 28
AsuNHI GCTAGC 1 cut(s) 739
BalI TGGCCA 1 cut(s) 507
BbrPI CACGTG 1 cut(s) 355
BbvI GCAGC 3 cut(s) 40, 237, 577
BccI CCATC 4 cut(s) 391, 497, 715, 751
BciT130I CCWGG 2 cut(s) 195, 509
BcoDI GTCTC 2 cut(s) 337, 706
BfaI CTAG 3 cut(s) 83, 123, 740
BfuAI ACCTGC 1 cut(s) 351
BisI GCNGC 6 cut(s) 29, 115, 118, 226, 591, 662
BlsI GCNGC 6 cut(s) 30, 116, 119, 227, 592, 663
Bme1390I CCNGG 2 cut(s) 195, 509
BmgBI CACGTC 2 cut(s) 325, 370
BmrFI CCNGG 2 cut(s) 195, 509
BmsI GCATC 3 cut(s) 237, 388, 754
BmtI GCTAGC 1 cut(s) 743
BsaAI YACGTR 2 cut(s) 96, 355
BsaJI CCNNGG 2 cut(s) 193, 194
Bsc4I CCNNNNNNNGG 2 cut(s) 56, 405
Bse1I ACTGG 1 cut(s) 522
BseBI CCWGG 2 cut(s) 195, 509
BseDI CCNNGG 2 cut(s) 193, 194
BseGI GGATG 5 cut(s) 212, 286, 379, 726, 769
BseLI CCNNNNNNNGG 2 cut(s) 56, 405
BseMII CTCAG 2 cut(s) 701, 707
BseNI ACTGG 1 cut(s) 522
BseX3I CGGCCG 1 cut(s) 115
BseXI GCAGC 3 cut(s) 40, 237, 577
BseYI CCCAGC 1 cut(s) 490
Bsh1236I CGCG 2 cut(s) 613, 664
Bsh1285I CGRYCG 1 cut(s) 118
BshFI GGCC 2 cut(s) 117, 507
BsiEI CGRYCG 1 cut(s) 118
BslFI GGGAC 2 cut(s) 161, 567
BslI CCNNNNNNNGG 2 cut(s) 56, 405
BsmAI GTCTC 2 cut(s) 337, 706
BsmFI GGGAC 2 cut(s) 161, 567
BsmI GAATGC 1 cut(s) 743
BsnI GGCC 2 cut(s) 117, 507
Bsp1407I TGTACA 2 cut(s) 9, 233
Bsp143I GATC 2 cut(s) 198, 442
BspACI CCGC 5 cut(s) 114, 118, 223, 399, 662
BspANI GGCC 2 cut(s) 117, 507
BspCNI CTCAG 2 cut(s) 702, 708
BspFNI CGCG 2 cut(s) 613, 664
BspMI ACCTGC 1 cut(s) 351
BspOI GCTAGC 1 cut(s) 743
BspPI GGATC 1 cut(s) 206
BsrGI TGTACA 2 cut(s) 9, 233
BsrI ACTGG 1 cut(s) 522
BssECI CCNNGG 2 cut(s) 193, 194
BssMI GATC 2 cut(s) 198, 442
Bst2UI CCWGG 2 cut(s) 195, 509
Bst4CI ACNGT 2 cut(s) 177, 558
BstAUI TGTACA 2 cut(s) 9, 233
BstBAI YACGTR 2 cut(s) 96, 355
BstC8I GCNNGC 1 cut(s) 741
BstDEI CTNAG 2 cut(s) 710, 716
BstF5I GGATG 5 cut(s) 212, 286, 379, 726, 769
BstFNI CGCG 2 cut(s) 613, 664
BstHHI GCGC 1 cut(s) 28
BstKTI GATC 2 cut(s) 201, 445
BstMAI GTCTC 2 cut(s) 337, 706
BstMBI GATC 2 cut(s) 198, 442
BstMCI CGRYCG 1 cut(s) 118
BstMWI GCNNNNNNNGC 3 cut(s) 66, 123, 132
BstNI CCWGG 2 cut(s) 195, 509
BstNSI RCATGY 1 cut(s) 477
BstSCI CCNGG 2 cut(s) 193, 507
BstUI CGCG 2 cut(s) 613, 664
BstV1I GCAGC 3 cut(s) 40, 237, 577
BstXI CCANNNNNNTGG 1 cut(s) 144
BstZI CGGCCG 1 cut(s) 115
BsuRI GGCC 2 cut(s) 117, 507
BtrI CACGTC 2 cut(s) 325, 370
BtsCI GGATG 5 cut(s) 212, 286, 379, 726, 769
BtsIMutI CAGTG 2 cut(s) 578, 707
BveI ACCTGC 1 cut(s) 351
Cac8I GCNNGC 1 cut(s) 741
CaiI CAGNNNCTG 2 cut(s) 231, 556
CciNI GCGGCCGC 1 cut(s) 115
CfoI GCGC 1 cut(s) 28
CseI GACGC 1 cut(s) 602
Csp6I GTAC 4 cut(s) 10, 41, 234, 682
CspCI CAANNNNNGTGG 2 cut(s) 336, 371
CviAII CATG 2 cut(s) 474, 730
CviQI GTAC 4 cut(s) 10, 41, 234, 682
DdeI CTNAG 2 cut(s) 710, 716
DpnI GATC 2 cut(s) 200, 444
DpnII GATC 2 cut(s) 198, 442
DrdI GACNNNNNNGTC 1 cut(s) 329
DseDI GACNNNNNNGTC 1 cut(s) 329
EaeI YGGCCR 2 cut(s) 115, 505
EagI CGGCCG 1 cut(s) 115
EclXI CGGCCG 1 cut(s) 115
Eco52I CGGCCG 1 cut(s) 115
Eco72I CACGTG 1 cut(s) 355
EcoRII CCWGG 2 cut(s) 193, 507
EcoT22I ATGCAT 1 cut(s) 641
FaeI CATG 2 cut(s) 477, 733
FaqI GGGAC 2 cut(s) 161, 567
FatI CATG 2 cut(s) 473, 729
FauI CCCGC 1 cut(s) 406
FblI GTMKAC 1 cut(s) 186
Fnu4HI GCNGC 6 cut(s) 29, 115, 118, 226, 591, 662
FokI GGATG 5 cut(s) 199, 273, 366, 733, 776
Fsp4HI GCNGC 6 cut(s) 29, 115, 118, 226, 591, 662
FspBI CTAG 3 cut(s) 83, 123, 740
GlaI GCGC 1 cut(s) 27
GluI GCNGC 6 cut(s) 29, 115, 118, 226, 591, 662
GsaI CCCAGC 1 cut(s) 494
HaeIII GGCC 2 cut(s) 117, 507
HgaI GACGC 1 cut(s) 602
HhaI GCGC 1 cut(s) 28
Hin1II CATG 2 cut(s) 477, 733
Hin6I GCGC 1 cut(s) 26
HinP1I GCGC 1 cut(s) 26
HincII GTYRAC 1 cut(s) 187
HindII GTYRAC 1 cut(s) 187
HinfI GANTC 2 cut(s) 149, 410
Hpy166II GTNNAC 5 cut(s) 12, 187, 576, 609, 668
Hpy188III TCNNGA 1 cut(s) 202
Hpy8I GTNNAC 5 cut(s) 12, 187, 576, 609, 668
HpyAV CCTTC 2 cut(s) 158, 413
HpyCH4III ACNGT 2 cut(s) 177, 558
HpyCH4IV ACGT 5 cut(s) 14, 95, 324, 354, 369
HpyCH4V TGCA 4 cut(s) 379, 619, 639, 767
HpyF10VI GCNNNNNNNGC 3 cut(s) 66, 123, 132
HpyF3I CTNAG 2 cut(s) 710, 716
HpySE526I ACGT 5 cut(s) 14, 95, 324, 354, 369
Hsp92II CATG 2 cut(s) 477, 733
HspAI GCGC 1 cut(s) 26
Kzo9I GATC 2 cut(s) 198, 442
LmnI GCTCC 1 cut(s) 467
Lsp1109I GCAGC 3 cut(s) 40, 237, 577
LweI GCATC 3 cut(s) 237, 388, 754
MaeI CTAG 3 cut(s) 83, 123, 740
MaeII ACGT 5 cut(s) 14, 95, 324, 354, 369
MaeIII GTNAC 2 cut(s) 208, 370
MalI GATC 2 cut(s) 200, 444
MboI GATC 2 cut(s) 198, 442
MboII GAAGA 3 cut(s) 290, 293, 766
MlsI TGGCCA 1 cut(s) 507
MluCI AATT 7 cut(s) 73, 89, 138, 156, 297, 348, 480
MluI ACGCGT 1 cut(s) 611
MluNI TGGCCA 1 cut(s) 507
MlyI GAGTC 2 cut(s) 143, 419
MmeI TCCRAC 1 cut(s) 445
MnlI CCTC 8 cut(s) 16, 50, 55, 200, 307, 429, 711, 754
Mox20I TGGCCA 1 cut(s) 507
Mph1103I ATGCAT 1 cut(s) 641
MscI TGGCCA 1 cut(s) 507
MseI TTAA 2 cut(s) 242, 630
Msp20I TGGCCA 1 cut(s) 507
MspR9I CCNGG 2 cut(s) 195, 509
Mva1269I GAATGC 1 cut(s) 743
MvaI CCWGG 2 cut(s) 195, 509
MvnI CGCG 2 cut(s) 613, 664
MwoI GCNNNNNNNGC 3 cut(s) 66, 123, 132
NdeII GATC 2 cut(s) 198, 442
NheI GCTAGC 1 cut(s) 739
NlaIII CATG 2 cut(s) 477, 733
NmuCI GTSAC 1 cut(s) 370
NotI GCGGCCGC 1 cut(s) 115
NsiI ATGCAT 1 cut(s) 641
NspI RCATGY 1 cut(s) 477
PasI CCCWGGG 1 cut(s) 194
PciI ACATGT 1 cut(s) 473
PctI GAATGC 1 cut(s) 743
PkrI GCNGC 6 cut(s) 30, 116, 119, 227, 592, 663
PleI GAGTC 2 cut(s) 143, 418
PmaCI CACGTG 1 cut(s) 355
PmlI CACGTG 1 cut(s) 355
PpsI GAGTC 2 cut(s) 143, 418
Ppu21I YACGTR 2 cut(s) 96, 355
PscI ACATGT 1 cut(s) 473
PshBI ATTAAT 1 cut(s) 242
Psp6I CCWGG 2 cut(s) 193, 507
PspCI CACGTG 1 cut(s) 355
PspFI CCCAGC 1 cut(s) 490
PspGI CCWGG 2 cut(s) 193, 507
PstNI CAGNNNCTG 2 cut(s) 231, 556
RsaI GTAC 4 cut(s) 11, 42, 235, 683
RsaNI GTAC 4 cut(s) 10, 41, 234, 682
SalI GTCGAC 1 cut(s) 185
SaqAI TTAA 2 cut(s) 242, 630
SatI GCNGC 6 cut(s) 29, 115, 118, 226, 591, 662
Sau3AI GATC 2 cut(s) 198, 442
SchI GAGTC 2 cut(s) 143, 419
ScrFI CCNGG 2 cut(s) 195, 509
SfaNI GCATC 3 cut(s) 237, 388, 754
Sse9I AATT 7 cut(s) 73, 89, 138, 156, 297, 348, 480
SsiI CCGC 5 cut(s) 114, 118, 223, 399, 662
SspMI CTAG 3 cut(s) 83, 123, 740
StyD4I CCNGG 2 cut(s) 193, 507
TaaI ACNGT 2 cut(s) 177, 558
TaiI ACGT 5 cut(s) 17, 98, 327, 357, 372
TaqI TCGA 3 cut(s) 21, 186, 312
TasI AATT 7 cut(s) 73, 89, 138, 156, 297, 348, 480
TatI WGTACW 2 cut(s) 9, 233
TauI GCSGC 3 cut(s) 117, 120, 664
Tru1I TTAA 2 cut(s) 242, 630
Tru9I TTAA 2 cut(s) 242, 630
TscAI CASTG 2 cut(s) 585, 714
TseFI GTSAC 1 cut(s) 370
TseI GCWGC 3 cut(s) 28, 225, 590
Tsp45I GTSAC 1 cut(s) 370
TspRI CASTG 2 cut(s) 585, 714
VspI ATTAAT 1 cut(s) 242
XapI RAATTY 1 cut(s) 89
XceI RCATGY 1 cut(s) 477
XcmI CCANNNNNNNNNTGG 1 cut(s) 421
XmiI GTMKAC 1 cut(s) 186
XspI CTAG 3 cut(s) 83, 123, 740
Zsp2I ATGCAT 1 cut(s) 641
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.