FvH4_6g06910

ubiquitin-protein transferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000056
Physical Location & Seq
Reverse (-)
4169038 .. 4170822
1785 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g06910.t1

Sequence Viewer

Length: 660 bp
ATGGAGTATTTCGATATCTTTCACTATGCGGTGCAGAAGGATCAAGTCGACCTCAGAGGGTCTTTGGAGGAGGACAAGCTTTTCATCAGATTCCAGTTCTTCAGGTCATTCCAATTCCGCCGTGTGCGAAACGGTCCATGTATTGTTAATACCATTGATCTTGTAGCCCAAGTAGATTATCGGGTAACGTTTTCTCATCTCAAGCAGCAATTATCTGACAACTACGACAGCGATAGGTATTATGAAACTATCTTCTCCGAGGCTCTGTCGAGTTTGGGTGTGCCGAAAGATGAACATCCTGCTGCTGTTGAGACGCTGTTCCGGAAGGTTGAGGCGGTCGTGGATCCCAAGTGCCCTGTTTTTCTGGGTGTGTTTGACACCACTGTCGTGGAGGGAGATGTTACACTGGATCCAAATTTGCCTAATTGGATTCCTGCAAGCAGATCGTTCATCCAGGGCTTGGAGCCAGTGCCATTCAATAGTGACATTATCGCACGCTCGCCTTACTGTACTGTTTGCTTGGAGGATTTTGAACAACAAGGACCCAGCACTCAGTTGCCCTGCACACACCATTTTCATCTGCATTGCATTGTTCAGTGCCTGGAGGTGAATCACATGTGTCCCCTCTGCCGATACGAGATGCCGATTGATCAAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2 zf-rbx1

Protein Analysis

220

Amino Acids

25.35

Weight (kDa)

4.87

Isoelectric Point (pI)

43.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 170 - 211 4.5e-10 Ring finger domain
zf-RING_11 PF17123 170 - 197 2.7e-07 RING-like zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000056)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G74620
fragaria_vesca FvH4_1g17310 FvH4_1g21860 FvH4_2g00301 FvH4_2g00500 FvH4_2g00510 FvH4_2g01040 FvH4_2g01040 FvH4_2g01040 FvH4_2g01511 FvH4_2g01521 FvH4_2g05410 FvH4_2g15860 FvH4_2g16170 FvH4_2g20442 FvH4_3g22600 FvH4_4g03111 FvH4_4g31810 FvH4_4g31840 FvH4_4g33571 FvH4_4g33580 FvH4_4g33600 FvH4_4g33620 FvH4_4g33620 FvH4_5g04820 FvH4_5g04820 FvH4_5g04821 FvH4_5g04821 FvH4_5g04830 FvH4_5g04833 FvH4_5g04833 FvH4_5g04834 FvH4_5g05562 FvH4_5g06150 FvH4_5g07970 FvH4_5g09910 FvH4_5g11280 FvH4_5g12010 FvH4_6g06910 FvH4_6g11580 FvH4_6g15110 FvH4_6g24322 FvH4_6g31360 FvH4_6g34080 FvH4_6g44500 FvH4_6g47060 FvH4_6g50581 FvH4_6g50641 FvH4_6g50650 FvH4_6g50650 FvH4_6g50981 FvH4_6g51090 FvH4_6g51180 FvH4_6g51730 FvH4_6g51740 FvH4_6g51870 FvH4_6g52331 FvH4_6g52340 FvH4_6g52350 FvH4_6g52530 FvH4_6g52530
malus_domestica MD14G1195700.v1.1
prunus_persica Prupe.6G084800_v2.0.a1 Prupe.7G084100_v2.0.a1 Prupe.8G048800_v2.0.a1
pyrus_communis pycom17g01390
rosa_chinensis RchiOBHm_Chr0c11g0499451 RchiOBHm_Chr1g0314791 RchiOBHm_Chr1g0340221 RchiOBHm_Chr1g0362121 RchiOBHm_Chr1g0362131 RchiOBHm_Chr2g0107491 RchiOBHm_Chr2g0127721 RchiOBHm_Chr2g0143901 RchiOBHm_Chr2g0161531 RchiOBHm_Chr2g0169511 RchiOBHm_Chr2g0171151 RchiOBHm_Chr2g0171221 RchiOBHm_Chr2g0171251 RchiOBHm_Chr2g0171261 RchiOBHm_Chr2g0171341 RchiOBHm_Chr2g0171561 RchiOBHm_Chr2g0171591 RchiOBHm_Chr2g0171601 RchiOBHm_Chr2g0172411 RchiOBHm_Chr2g0172441 RchiOBHm_Chr2g0172771 RchiOBHm_Chr2g0172881 RchiOBHm_Chr2g0173201 RchiOBHm_Chr2g0173211 RchiOBHm_Chr2g0173941 RchiOBHm_Chr2g0173951 RchiOBHm_Chr2g0175281 RchiOBHm_Chr3g0463081 RchiOBHm_Chr3g0482941 RchiOBHm_Chr3g0486241 RchiOBHm_Chr3g0488151 RchiOBHm_Chr3g0488191 RchiOBHm_Chr3g0488271 RchiOBHm_Chr3g0488351 RchiOBHm_Chr3g0488411 RchiOBHm_Chr3g0488491 RchiOBHm_Chr4g0410881 RchiOBHm_Chr4g0440431 RchiOBHm_Chr4g0440501 RchiOBHm_Chr6g0269041 RchiOBHm_Chr7g0194201 RchiOBHm_Chr7g0194301 RchiOBHm_Chr7g0194311 RchiOBHm_Chr7g0194391 RchiOBHm_Chr7g0194401 RchiOBHm_Chr7g0236181
rosa_laevigata RLG00000004203 RLG00000006176 RLG00000022170 RLG00000022198 RLG00000022237 RLG00000022911
rosa_multiflora Rmu_co8086672.1_g000001 Rmu_co8091660.1_g000001 Rmu_co8325445.1_g000001 Rmu_co8482323.1_g000001 Rmu_sc0000239.1_g000034 Rmu_sc0000467.1_g000001 Rmu_sc0000766.1_g000038 Rmu_sc0000789.1_g000004 Rmu_sc0000831.1_g000055 Rmu_sc0000831.1_g000056 Rmu_sc0000831.1_g000057 Rmu_sc0000831.1_g000058 Rmu_sc0000831.1_g000059 Rmu_sc0000831.1_g000060 Rmu_sc0000901.1_g000011 Rmu_sc0000901.1_g000029 Rmu_sc0001513.1_g000006 Rmu_sc0001513.1_g000011 Rmu_sc0001576.1_g000034 Rmu_sc0001685.1_g000062 Rmu_sc0002784.1_g000036 Rmu_sc0003188.1_g000026 Rmu_sc0003188.1_g000027 Rmu_sc0003314.1_g000017 Rmu_sc0003548.1_g000019 Rmu_sc0003624.1_g000018 Rmu_sc0005193.1_g000015 Rmu_sc0006328.1_g000001 Rmu_sc0006328.1_g000005 Rmu_sc0006806.1_g000014 Rmu_sc0006806.1_g000028 Rmu_sc0007320.1_g000005 Rmu_sc0007493.1_g000003 Rmu_sc0007646.1_g000011 Rmu_sc0007648.1_g000001 Rmu_sc0007661.1_g000007 Rmu_sc0007684.1_g000008 Rmu_sc0007799.1_g000007 Rmu_sc0007841.1_g000004 Rmu_sc0008051.1_g000003 Rmu_sc0008124.1_g000008 Rmu_sc0009104.1_g000008 Rmu_sc0009433.1_g000012 Rmu_sc0009883.1_g000011 Rmu_sc0010744.1_g000003 Rmu_sc0011052.1_g000003 Rmu_sc0012403.1_g000008 Rmu_sc0013831.1_g000001 Rmu_sc0016754.1_g000004 Rmu_sc0022238.1_g000002 Rmu_sc0023157.1_g000001 Rmu_sc0023894.1_g000001 Rmu_sc0028130.1_g000001 Rmu_sc0040543.1_g000001 Rmu_ssc0000252.1_g000003 Rmu_ssc0000252.1_g000004 Rmu_ssc0000261.1_g000030 Rmu_ssc0000326.1_g000007
rosa_roxburghii Rroxscaffold_157G00438560 Rroxscaffold_2G00078410 Rroxscaffold_2G00078970 Rroxscaffold_2G00079030 Rroxscaffold_2G00079120 Rroxscaffold_2G00079340 Rroxscaffold_2G00079720 Rroxscaffold_2G00079870 Rroxscaffold_2G00079910 Rroxscaffold_2G00080570 Rroxscaffold_2G00080720 Rroxscaffold_2G00080770 Rroxscaffold_2G00080780 Rroxscaffold_2G00080850 Rroxscaffold_2G00080910 Rroxscaffold_2G00116750 Rroxscaffold_3G00261370 Rroxscaffold_3G00261500 Rroxscaffold_3G00266200 Rroxscaffold_4G00305290 Rroxscaffold_4G00311110 Rroxscaffold_4G00327720 Rroxscaffold_5G00381290 Rroxscaffold_5G00381320 Rroxscaffold_6G00394220 Rroxscaffold_6G00416970
rosa_rugosa Rorug01G0164800.1 Rorug01G0164900 Rorug01G0293800 Rorug01G0293900 Rorug01G0294200 Rorug02G0144400 Rorug02G0271300 Rorug02G0271400 Rorug02G0271400 Rorug02G0271500 Rorug02G0384900 Rorug02G0384900 Rorug02G0385000 Rorug02G0385100 Rorug02G0553000 Rorug02G0553100 Rorug02G0555000 Rorug02G0560000 Rorug02G0560100 Rorug02G0561500 Rorug02G0566500 Rorug02G0568800 Rorug02G0569000 Rorug02G0569400 Rorug02G0569700 Rorug02G0575200 Rorug02G0582300 Rorug03G0061300 Rorug03G0126300 Rorug03G0202400 Rorug03G0224200 Rorug03G0238200 Rorug03G0238300 Rorug03G0238400 Rorug03G0255100 Rorug03G0255100 Rorug04G0326000 Rorug04G0326200 Rorug04G0326300 Rorug06G0124000 Rorug07G0015300 Rorug07G0015700 Rorug07G0015700 Rorug07G0265000
rosa_samantha Rh1AG304100 Rh1AG304500 Rh1AG304600 Rh1CG166600 Rh1CG285500 Rh1DG218600 Rh2AG323600 Rh2AG611800 Rh2AG626100 Rh2AG626400 Rh2AG627700 Rh2AG629700 Rh2AG634400 Rh2AG634500 Rh2AG634800 Rh2AG652800 Rh2BG206800 Rh2BG636300 Rh2BG636400 Rh2BG637300 Rh2BG637400 Rh2BG642600 Rh2BG648000 Rh2BG648300 Rh2BG652700 Rh2BG664000 Rh2CG311300 Rh2CG604800 Rh2CG605400 Rh2CG606300 Rh2CG606800 Rh2CG623800 Rh2CG628700 Rh2DG201600 Rh2DG351100 Rh2DG648000 Rh2DG648100 Rh2DG648900 Rh2DG649000 Rh2DG649100 Rh2DG651000 Rh2DG654900 Rh2DG655100 Rh2DG655200 Rh2DG656700 Rh2DG656900 Rh2DG657100 Rh2DG662700 Rh2DG662900 Rh2DG666300 Rh2DG667000 Rh2DG670700 Rh2DG672100 Rh2DG673400 Rh2DG673600 Rh2DG675200 Rh2DG675300 Rh2DG675600 Rh2DG679000 Rh2DG679100 Rh3AG048000 Rh3AG048100 Rh3AG106800 Rh3AG119500 Rh3AG251300 Rh3AG285800 Rh3AG286700 Rh3AG287300 Rh3AG287400 Rh3CG049400 Rh3CG321600 Rh3DG320300 Rh4AG377300 Rh4AG377700 Rh4AG377900 Rh4DG159200 Rh7AG064400 Rh7AG097600 Rh7AG141500 Rh7AG142100 Rh7AG142200 Rh7AG142300 Rh7AG142600 Rh7AG142800 Rh7AG417800 Rh7AG424000 Rh7CG147100 Rh7DG143000 Rh7DG143900 Rh7DG144400 Rh7DG144700
rosa_wichuraiana Rw0G019520 Rw1G014950 Rw1G027080 Rw2G015390 Rw2G035650 Rw2G046060 Rw2G050780 Rw2G050810 Rw2G051810 Rw2G051850 Rw2G051940 Rw2G051990 Rw2G052000 Rw2G052130 Rw2G052140 Rw2G052530 Rw2G052760 Rw2G052830 Rw2G053180 Rw2G053330 Rw2G053630 Rw3G010110 Rw3G024300 Rw3G025400 Rw3G025450 Rw4G032320 Rw4G032440 Rw6G037400 Rw7G012180 Rw7G012220

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 383
AccB7I CCANNNNNTGG 1 cut(s) 460
AccI GTMKAC 1 cut(s) 48
AccIII TCCGGA 1 cut(s) 321
AciI CCGC 3 cut(s) 29, 118, 335
AclI AACGTT 1 cut(s) 188
AclWI GGATC 5 cut(s) 48, 338, 351, 404, 417
AcsI RAATTY 1 cut(s) 415
AcuI CTGAAG 1 cut(s) 85
AfaI GTAC 1 cut(s) 511
AfiI CCNNNNNNNGG 1 cut(s) 460
AflIII ACRYGT 1 cut(s) 615
AgsI TTSAA 2 cut(s) 478, 533
AjnI CCWGG 2 cut(s) 453, 600
AleI CACNNNNGTG 1 cut(s) 386
AluBI AGCT 1 cut(s) 79
AluI AGCT 1 cut(s) 79
Alw26I GTCTC 1 cut(s) 305
AlwI GGATC 5 cut(s) 48, 338, 351, 404, 417
AlwNI CAGNNNCTG 1 cut(s) 601
Aor13HI TCCGGA 1 cut(s) 321
ApeKI GCWGC 2 cut(s) 205, 302
ApoI RAATTY 1 cut(s) 415
AspS9I GGNCC 2 cut(s) 134, 542
AsuHPI GGTGA 1 cut(s) 619
AvaII GGWCC 2 cut(s) 134, 542
BaeGI GKGCMC 1 cut(s) 356
BamHI GGATCC 2 cut(s) 343, 409
BbvI GCAGC 2 cut(s) 217, 289
BceAI ACGGC 1 cut(s) 105
BcgI CGANNNNNNTGC 2 cut(s) 426, 460
BciT130I CCWGG 2 cut(s) 455, 602
BclI TGATCA 1 cut(s) 649
BcoDI GTCTC 1 cut(s) 305
BisI GCNGC 2 cut(s) 206, 303
BlsI GCNGC 2 cut(s) 207, 304
Bme1390I CCNGG 2 cut(s) 455, 602
Bme18I GGWCC 2 cut(s) 134, 542
BmgT120I GGNCC 2 cut(s) 134, 542
BmiI GGNNCC 4 cut(s) 345, 411, 465, 544
BmrFI CCNGG 2 cut(s) 455, 602
BmsI GCATC 1 cut(s) 630
BpmI CTGGAG 1 cut(s) 623
BpuEI CTTGAG 1 cut(s) 185
BsaBI GATNNNNATC 1 cut(s) 294
BsaJI CCNNGG 2 cut(s) 258, 454
BsaWI WCCGGW 1 cut(s) 321
Bsc4I CCNNNNNNNGG 1 cut(s) 460
Bse1I ACTGG 3 cut(s) 94, 411, 467
Bse3DI GCAATG 1 cut(s) 583
Bse8I GATNNNNATC 1 cut(s) 294
BseAI TCCGGA 1 cut(s) 321
BseBI CCWGG 2 cut(s) 455, 602
BseDI CCNNGG 2 cut(s) 258, 454
BseGI GGATG 2 cut(s) 295, 450
BseJI GATNNNNATC 1 cut(s) 294
BseLI CCNNNNNNNGG 1 cut(s) 460
BseMI GCAATG 1 cut(s) 583
BseMII CTCAG 2 cut(s) 67, 566
BseNI ACTGG 3 cut(s) 94, 411, 467
BseRI GAGGAG 1 cut(s) 83
BseSI GKGCMC 1 cut(s) 356
BseXI GCAGC 2 cut(s) 217, 289
BseYI CCCAGC 1 cut(s) 545
BsgI GTGCAG 2 cut(s) 53, 547
Bsh1285I CGRYCG 1 cut(s) 339
BsiEI CGRYCG 1 cut(s) 339
BsiSI CCGG 1 cut(s) 322
BslFI GGGAC 1 cut(s) 606
BslI CCNNNNNNNGG 1 cut(s) 460
BsmAI GTCTC 1 cut(s) 305
BsmBI CGTCTC 1 cut(s) 305
BsmFI GGGAC 1 cut(s) 606
Bsp1286I GDGCHC 1 cut(s) 356
Bsp13I TCCGGA 1 cut(s) 321
Bsp143I GATC 6 cut(s) 40, 157, 343, 409, 443, 649
BspACI CCGC 3 cut(s) 29, 118, 335
BspCNI CTCAG 2 cut(s) 66, 565
BspEI TCCGGA 1 cut(s) 321
BspLI GGNNCC 4 cut(s) 345, 411, 465, 544
BspPI GGATC 5 cut(s) 48, 338, 351, 404, 417
BsrDI GCAATG 1 cut(s) 583
BsrI ACTGG 3 cut(s) 94, 411, 467
BssECI CCNNGG 2 cut(s) 258, 454
BssMI GATC 6 cut(s) 40, 157, 343, 409, 443, 649
Bst2UI CCWGG 2 cut(s) 455, 602
Bst4CI ACNGT 4 cut(s) 134, 385, 509, 514
BstC8I GCNNGC 3 cut(s) 439, 496, 500
BstDEI CTNAG 2 cut(s) 53, 552
BstF5I GGATG 2 cut(s) 295, 450
BstKTI GATC 6 cut(s) 43, 160, 346, 412, 446, 652
BstMAI GTCTC 1 cut(s) 305
BstMBI GATC 6 cut(s) 40, 157, 343, 409, 443, 649
BstMCI CGRYCG 1 cut(s) 339
BstNI CCWGG 2 cut(s) 455, 602
BstNSI RCATGY 1 cut(s) 619
BstSCI CCNGG 2 cut(s) 453, 600
BstSLI GKGCMC 1 cut(s) 356
BstV1I GCAGC 2 cut(s) 217, 289
BstX2I RGATCY 2 cut(s) 343, 409
BstXI CCANNNNNNTGG 1 cut(s) 388
BstYI RGATCY 2 cut(s) 343, 409
BtsCI GGATG 2 cut(s) 295, 450
BtsIMutI CAGTG 4 cut(s) 381, 404, 474, 602
Cac8I GCNNGC 3 cut(s) 439, 496, 500
CaiI CAGNNNCTG 1 cut(s) 601
Cfr13I GGNCC 2 cut(s) 134, 542
CseI GACGC 1 cut(s) 322
Csp6I GTAC 1 cut(s) 510
CviAII CATG 2 cut(s) 138, 616
CviJI RGCY 5 cut(s) 79, 167, 263, 459, 466
CviKI_1 RGCY 5 cut(s) 79, 167, 263, 459, 466
CviQI GTAC 1 cut(s) 510
DdeI CTNAG 2 cut(s) 53, 552
DpnI GATC 6 cut(s) 42, 159, 345, 411, 445, 651
DpnII GATC 6 cut(s) 40, 157, 343, 409, 443, 649
DrdI GACNNNNNNGTC 1 cut(s) 383
DseDI GACNNNNNNGTC 1 cut(s) 383
EciI GGCGGA 1 cut(s) 107
Eco32I GATATC 1 cut(s) 16
Eco47I GGWCC 2 cut(s) 134, 542
Eco57I CTGAAG 1 cut(s) 85
EcoO109I RGGNCCY 1 cut(s) 542
EcoRII CCWGG 2 cut(s) 453, 600
EcoRV GATATC 1 cut(s) 16
Esp3I CGTCTC 1 cut(s) 305
FaeI CATG 2 cut(s) 141, 619
FaiI YATR 4 cut(s) 27, 139, 243, 617
FaqI GGGAC 1 cut(s) 606
FatI CATG 2 cut(s) 137, 615
FbaI TGATCA 1 cut(s) 649
FblI GTMKAC 1 cut(s) 48
Fnu4HI GCNGC 2 cut(s) 206, 303
FokI GGATG 2 cut(s) 282, 437
Fsp4HI GCNGC 2 cut(s) 206, 303
GluI GCNGC 2 cut(s) 206, 303
GsaI CCCAGC 1 cut(s) 549
GsuI CTGGAG 1 cut(s) 623
HapII CCGG 1 cut(s) 322
HgaI GACGC 1 cut(s) 322
Hin1II CATG 2 cut(s) 141, 619
HincII GTYRAC 1 cut(s) 49
HindII GTYRAC 1 cut(s) 49
HindIII AAGCTT 1 cut(s) 77
HinfI GANTC 3 cut(s) 90, 430, 610
HpaII CCGG 1 cut(s) 322
HphI GGTGA 1 cut(s) 619
Hpy166II GTNNAC 1 cut(s) 49
Hpy188I TCNGA 4 cut(s) 56, 89, 217, 259
Hpy188III TCNNGA 2 cut(s) 322, 653
Hpy8I GTNNAC 1 cut(s) 49
HpyAV CCTTC 2 cut(s) 31, 319
HpyCH4III ACNGT 4 cut(s) 134, 385, 509, 514
HpyCH4IV ACGT 1 cut(s) 188
HpyCH4V TGCA 5 cut(s) 34, 437, 564, 583, 588
HpyF3I CTNAG 2 cut(s) 53, 552
HpySE526I ACGT 1 cut(s) 188
Hsp92II CATG 2 cut(s) 141, 619
Kpn2I TCCGGA 1 cut(s) 321
Ksp22I TGATCA 1 cut(s) 649
Kzo9I GATC 6 cut(s) 40, 157, 343, 409, 443, 649
LmnI GCTCC 1 cut(s) 463
Lsp1109I GCAGC 2 cut(s) 217, 289
LweI GCATC 1 cut(s) 630
MaeII ACGT 1 cut(s) 188
MaeIII GTNAC 3 cut(s) 184, 400, 482
MalI GATC 6 cut(s) 42, 159, 345, 411, 445, 651
MboI GATC 6 cut(s) 40, 157, 343, 409, 443, 649
MboII GAAGA 2 cut(s) 91, 244
MflI RGATCY 2 cut(s) 343, 409
MhlI GDGCHC 1 cut(s) 356
MluCI AATT 4 cut(s) 113, 209, 415, 424
MroI TCCGGA 1 cut(s) 321
MseI TTAA 2 cut(s) 147, 658
MslI CAYNNNNRTG 1 cut(s) 386
MspI CCGG 1 cut(s) 322
MspR9I CCNGG 2 cut(s) 455, 602
MvaI CCWGG 2 cut(s) 455, 602
NdeII GATC 6 cut(s) 40, 157, 343, 409, 443, 649
NlaIII CATG 2 cut(s) 141, 619
NlaIV GGNNCC 4 cut(s) 345, 411, 465, 544
NmuCI GTSAC 1 cut(s) 482
NspI RCATGY 1 cut(s) 619
OliI CACNNNNGTG 1 cut(s) 386
PciI ACATGT 1 cut(s) 615
PfeI GAWTC 3 cut(s) 90, 430, 610
PflMI CCANNNNNTGG 1 cut(s) 460
PkrI GCNGC 2 cut(s) 207, 304
PpuMI RGGWCCY 1 cut(s) 542
PscI ACATGT 1 cut(s) 615
Psp1406I AACGTT 1 cut(s) 188
Psp5II RGGWCCY 1 cut(s) 542
Psp6I CCWGG 2 cut(s) 453, 600
PspFI CCCAGC 1 cut(s) 545
PspGI CCWGG 2 cut(s) 453, 600
PspN4I GGNNCC 4 cut(s) 345, 411, 465, 544
PspPI GGNCC 2 cut(s) 134, 542
PspPPI RGGWCCY 1 cut(s) 542
PstNI CAGNNNCTG 1 cut(s) 601
PsuI RGATCY 2 cut(s) 343, 409
RsaI GTAC 1 cut(s) 511
RsaNI GTAC 1 cut(s) 510
RseI CAYNNNNRTG 1 cut(s) 386
SalI GTCGAC 1 cut(s) 47
SaqAI TTAA 2 cut(s) 147, 658
SatI GCNGC 2 cut(s) 206, 303
Sau3AI GATC 6 cut(s) 40, 157, 343, 409, 443, 649
Sau96I GGNCC 2 cut(s) 134, 542
ScrFI CCNGG 2 cut(s) 455, 602
SduI GDGCHC 1 cut(s) 356
SetI ASST 7 cut(s) 54, 81, 107, 191, 239, 330, 609
SfaNI GCATC 1 cut(s) 630
SinI GGWCC 2 cut(s) 134, 542
SmiMI CAYNNNNRTG 1 cut(s) 386
SmlI CTYRAG 1 cut(s) 200
SmoI CTYRAG 1 cut(s) 200
Sse9I AATT 4 cut(s) 113, 209, 415, 424
SsiI CCGC 3 cut(s) 29, 118, 335
StyD4I CCNGG 2 cut(s) 453, 600
TaaI ACNGT 4 cut(s) 134, 385, 509, 514
TaiI ACGT 1 cut(s) 191
TaqI TCGA 3 cut(s) 12, 48, 269
TasI AATT 4 cut(s) 113, 209, 415, 424
TatI WGTACW 1 cut(s) 509
TfiI GAWTC 3 cut(s) 90, 430, 610
Tru1I TTAA 2 cut(s) 147, 658
Tru9I TTAA 2 cut(s) 147, 658
TscAI CASTG 4 cut(s) 388, 411, 474, 602
TseFI GTSAC 1 cut(s) 482
TseI GCWGC 2 cut(s) 205, 302
Tsp45I GTSAC 1 cut(s) 482
TspDTI ATGAA 5 cut(s) 73, 258, 306, 439, 566
TspRI CASTG 4 cut(s) 388, 411, 474, 602
Van91I CCANNNNNTGG 1 cut(s) 460
VpaK11BI GGWCC 2 cut(s) 134, 542
XapI RAATTY 1 cut(s) 415
XceI RCATGY 1 cut(s) 619
XmiI GTMKAC 1 cut(s) 48
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.